Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063116.t1 | XP_003604013.1 | 95.8 | 693 | 27 | 1 | 1 | 693 | 1 | 691 | 0.00E+00 | 1180.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063116.t1 | Q9T0J6 | 58.5 | 694 | 239 | 7 | 15 | 693 | 32 | 691 | 3.8e-229 | 795.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063116.t1 | G7J7T8 | 95.8 | 693 | 27 | 1 | 1 | 693 | 1 | 691 | 0.0e+00 | 1180.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene063116.t1 | TF | C3H |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene036254 | MS.gene063116 | PPI |
MS.gene40016 | MS.gene063116 | PPI |
MS.gene004699 | MS.gene063116 | PPI |
MS.gene32083 | MS.gene063116 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063116.t1 | MTR_3g117580 | 96.681 | 693 | 21 | 1 | 1 | 693 | 1 | 691 | 0.0 | 1385 |
MS.gene063116.t1 | MTR_8g067420 | 28.000 | 250 | 157 | 7 | 336 | 569 | 1 | 243 | 7.05e-21 | 94.4 |
MS.gene063116.t1 | MTR_8g067420 | 27.193 | 228 | 144 | 6 | 336 | 547 | 1 | 222 | 6.53e-18 | 84.3 |
MS.gene063116.t1 | MTR_8g067420 | 27.193 | 228 | 144 | 6 | 336 | 547 | 1 | 222 | 1.10e-17 | 84.0 |
MS.gene063116.t1 | MTR_4g094905 | 28.502 | 207 | 126 | 8 | 339 | 536 | 39 | 232 | 7.59e-13 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063116.t1 | AT4G38890 | 62.700 | 689 | 218 | 11 | 15 | 693 | 32 | 691 | 0.0 | 865 |
MS.gene063116.t1 | AT3G49640 | 28.846 | 312 | 180 | 12 | 336 | 627 | 1 | 290 | 1.28e-26 | 111 |
MS.gene063116.t1 | AT3G49640 | 28.846 | 312 | 180 | 12 | 336 | 627 | 1 | 290 | 4.09e-26 | 110 |
MS.gene063116.t1 | AT3G49640 | 31.034 | 232 | 130 | 7 | 336 | 547 | 1 | 222 | 2.50e-21 | 94.4 |
MS.gene063116.t1 | AT3G49640 | 30.045 | 223 | 129 | 9 | 411 | 627 | 50 | 251 | 4.71e-20 | 90.9 |
MS.gene063116.t1 | AT3G49640 | 30.045 | 223 | 129 | 9 | 411 | 627 | 50 | 251 | 1.50e-19 | 90.1 |
MS.gene063116.t1 | AT5G67220 | 27.885 | 208 | 142 | 4 | 339 | 544 | 87 | 288 | 1.67e-16 | 82.8 |
Find 163 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCACTACTTGCAAATTATT+AGG | 0.146154 | 3.3:+95518005 | None:intergenic |
CATTCATCTGAAGATTTATT+TGG | 0.158032 | 3.3:-95518625 | MS.gene063116:CDS |
AAAAGAAGCTTATTGATTTC+AGG | 0.171029 | 3.3:-95519194 | MS.gene063116:CDS |
CCACTACTTGCAAATTATTA+GGG | 0.199094 | 3.3:+95518006 | None:intergenic |
TCTGAAGGGGCTTGCCCTTA+TGG | 0.207997 | 3.3:-95520415 | MS.gene063116:CDS |
TTTGAGTTTGGCATCAGTTT+TGG | 0.209531 | 3.3:+95520258 | None:intergenic |
GTACATACCTGTTGGTCTTT+TGG | 0.213055 | 3.3:-95517120 | MS.gene063116:CDS |
CGGAGAGTTTGCAAAGTATT+AGG | 0.224724 | 3.3:-95519123 | MS.gene063116:CDS |
TTCAAGCTTAGATCAGTTTC+TGG | 0.235550 | 3.3:+95519231 | None:intergenic |
TATTGACATTGTTGTGAATA+AGG | 0.254656 | 3.3:-95518500 | MS.gene063116:CDS |
GAAAATACCTTTATAGTTAC+TGG | 0.254912 | 3.3:+95518400 | None:intergenic |
GGCAATGTGCACAAATCTTT+TGG | 0.260235 | 3.3:-95519076 | MS.gene063116:CDS |
GAGGGTGGCGAGGATGATTC+TGG | 0.262956 | 3.3:-95520959 | MS.gene063116:CDS |
AAGGAAAGGTGTGAAGTTAA+TGG | 0.263218 | 3.3:-95520331 | MS.gene063116:CDS |
ATCAAGCATGTGGCAAGTTC+AGG | 0.280736 | 3.3:+95517930 | None:intergenic |
CTGTTGGAAATCTCCCTTTC+CGG | 0.300157 | 3.3:-95519143 | MS.gene063116:CDS |
TTCAATCCGTTAGAAGATAA+AGG | 0.302002 | 3.3:+95520352 | None:intergenic |
ACAGCTCGCCCTACAGTATC+TGG | 0.309018 | 3.3:+95518580 | None:intergenic |
AGTGCAGAAATTGGCTGATT+TGG | 0.309679 | 3.3:-95520461 | MS.gene063116:intron |
CAAATTATTAGGGGCTTTCC+TGG | 0.310598 | 3.3:+95518016 | None:intergenic |
TCACCTGACTTGGCAATGTT+TGG | 0.321046 | 3.3:+95520629 | None:intergenic |
TGCAGCTTCCGTCCACAATT+TGG | 0.322863 | 3.3:+95519292 | None:intergenic |
TGGCGTCCACCATCTTACTA+TGG | 0.337133 | 3.3:-95517074 | MS.gene063116:CDS |
TAAGCATTTGATTTATGCTT+TGG | 0.341936 | 3.3:+95516488 | None:intergenic |
CTGAAGGGGCTTGCCCTTAT+GGG | 0.347394 | 3.3:-95520414 | MS.gene063116:CDS |
TTCTTCTCCTTGGCGAGAAC+GGG | 0.350694 | 3.3:+95520797 | None:intergenic |
CCTCCGACTCTGCAGCTGAC+TGG | 0.356032 | 3.3:-95517025 | MS.gene063116:CDS |
CTGGATATTTACAGAGATAA+AGG | 0.364629 | 3.3:-95517729 | MS.gene063116:CDS |
TTATTCACAACAATGTCAAT+AGG | 0.366558 | 3.3:+95518502 | None:intergenic |
ACTCAAACGTGAACGTCTTC+AGG | 0.379434 | 3.3:-95520762 | MS.gene063116:intron |
TGAAATAACATGCGGTGAAA+TGG | 0.380122 | 3.3:-95519097 | MS.gene063116:CDS |
GCTTACGATAGAGCTGAAAA+TGG | 0.381878 | 3.3:-95516470 | MS.gene063116:CDS |
TGATAGCAAACTTTAGCTCT+TGG | 0.383995 | 3.3:-95518124 | MS.gene063116:CDS |
TGGTTCCACAACGAATAAAT+TGG | 0.387831 | 3.3:-95517094 | MS.gene063116:CDS |
CGAATGAAGTCCTTCTTAAC+AGG | 0.389902 | 3.3:+95520875 | None:intergenic |
CTTTATCTCTGTAAATATCC+AGG | 0.392779 | 3.3:+95517730 | None:intergenic |
ACTCAAAACTCTTGGTCTCT+TGG | 0.396620 | 3.3:-95520242 | MS.gene063116:intron |
CGACATTGGGACATCAGTTC+TGG | 0.407542 | 3.3:-95517701 | MS.gene063116:CDS |
CGATATTCCAGTAACTATAA+AGG | 0.408639 | 3.3:-95518407 | MS.gene063116:intron |
AATGGCTTAGCTACACTTGT+AGG | 0.413091 | 3.3:-95517142 | MS.gene063116:CDS |
AAAGAAGCTTATTGATTTCA+GGG | 0.413252 | 3.3:-95519193 | MS.gene063116:CDS |
CTCCGACTCTGCAGCTGACT+GGG | 0.414717 | 3.3:-95517024 | MS.gene063116:intron |
CGATTATCAGAGATGTTACT+TGG | 0.415656 | 3.3:-95516539 | MS.gene063116:CDS |
CTGATGATGACGGCTCTTGT+GGG | 0.420813 | 3.3:-95519600 | MS.gene063116:CDS |
GACTACCAGGCGGTTCTTGT+TGG | 0.425033 | 3.3:-95517165 | MS.gene063116:CDS |
CCTTGAATGCTTGAATATCA+TGG | 0.425429 | 3.3:+95520567 | None:intergenic |
TTTATCTTCTAACGGATTGA+AGG | 0.427366 | 3.3:-95520350 | MS.gene063116:CDS |
TCAAGCTTAGATCAGTTTCT+GGG | 0.431326 | 3.3:+95519232 | None:intergenic |
GCCCCTTCAGATTTCAGAAA+AGG | 0.433089 | 3.3:+95520427 | None:intergenic |
ATTATTCAGAATAAGTCAAA+AGG | 0.433111 | 3.3:-95519739 | MS.gene063116:intron |
TATTCACAACAATGTCAATA+GGG | 0.433555 | 3.3:+95518503 | None:intergenic |
GCGTTTAGATTTCTTCTCCT+TGG | 0.436186 | 3.3:+95520787 | None:intergenic |
TGTCCAAACATTGCCAAGTC+AGG | 0.437155 | 3.3:-95520632 | MS.gene063116:CDS |
GATAGCAAACTTTAGCTCTT+GGG | 0.437315 | 3.3:-95518123 | MS.gene063116:CDS |
ATTGACATTGTTGTGAATAA+GGG | 0.443562 | 3.3:-95518499 | MS.gene063116:CDS |
TCTGATGATGACGGCTCTTG+TGG | 0.451639 | 3.3:-95519601 | MS.gene063116:CDS |
AATCTACAGGATAACCCATA+AGG | 0.452239 | 3.3:+95520400 | None:intergenic |
AGAACGGGAGGTTTGTCGTT+AGG | 0.455603 | 3.3:+95520812 | None:intergenic |
CTATAGCAAGCCTGCTGACT+GGG | 0.455984 | 3.3:-95518057 | MS.gene063116:CDS |
CTTGCACCCTTGACCACTGT+TGG | 0.457396 | 3.3:-95519159 | MS.gene063116:CDS |
CCATGATATTCAAGCATTCA+AGG | 0.465143 | 3.3:-95520567 | MS.gene063116:CDS |
TATTCAAGCATTCAAGGAAC+AGG | 0.470870 | 3.3:-95520561 | MS.gene063116:intron |
ACCACATCCAAAAGACCAAC+AGG | 0.471371 | 3.3:+95517113 | None:intergenic |
AGTAGTAGAAGTAGTTCGAT+CGG | 0.471860 | 3.3:+95520844 | None:intergenic |
CAAATAAATCTTCAGATGAA+TGG | 0.475342 | 3.3:+95518626 | None:intergenic |
CCTAATAATTTGCAAGTAGT+GGG | 0.481679 | 3.3:-95518005 | MS.gene063116:CDS |
GCTATAGCAAGCCTGCTGAC+TGG | 0.484632 | 3.3:-95518058 | MS.gene063116:CDS |
CCAGGCGGTTCTTGTTGGAA+TGG | 0.486124 | 3.3:-95517160 | MS.gene063116:CDS |
AGATAAAGGAACAGCGACAT+TGG | 0.487762 | 3.3:-95517715 | MS.gene063116:CDS |
ATCTACAGGATAACCCATAA+GGG | 0.490649 | 3.3:+95520401 | None:intergenic |
AGCTGTTGAACTAATAGAAA+AGG | 0.491306 | 3.3:-95518563 | MS.gene063116:CDS |
GGTGCAAAAGTAAAGCCATC+TGG | 0.492838 | 3.3:+95516509 | None:intergenic |
CTAATACTTTGCAAACTCTC+CGG | 0.503430 | 3.3:+95519124 | None:intergenic |
CCCTAATAATTTGCAAGTAG+TGG | 0.503908 | 3.3:-95518006 | MS.gene063116:CDS |
GAGATTTCCAACAGTGGTCA+AGG | 0.504165 | 3.3:+95519152 | None:intergenic |
TTTCTTCTCCTTGGCGAGAA+CGG | 0.504371 | 3.3:+95520796 | None:intergenic |
AGTGTTGTAGAAGTAGCTTC+AGG | 0.504684 | 3.3:-95518436 | MS.gene063116:CDS |
GATAAAGGAACAGCGACATT+GGG | 0.506305 | 3.3:-95517714 | MS.gene063116:CDS |
CTTCTAACGGATTGAAGGAA+AGG | 0.507476 | 3.3:-95520345 | MS.gene063116:CDS |
GAAGTAGTTCGATCGGGAGG+AGG | 0.507762 | 3.3:+95520851 | None:intergenic |
ATGCATAGCTCCTGTTAAGA+AGG | 0.509595 | 3.3:-95520885 | MS.gene063116:CDS |
CTTTGCAAACTCTCCGGAAA+GGG | 0.509906 | 3.3:+95519130 | None:intergenic |
TATTTGGTGTACAAATCTGT+GGG | 0.518175 | 3.3:-95518609 | MS.gene063116:CDS |
AGGGTGGCGAGGATGATTCT+GGG | 0.519642 | 3.3:-95520958 | MS.gene063116:CDS |
GGTAAGCCTTTATCTTCTAA+CGG | 0.521576 | 3.3:-95520358 | MS.gene063116:CDS |
AATAGGGTCAAGCTTCAGAA+TGG | 0.525188 | 3.3:-95518663 | MS.gene063116:intron |
GATGCCAAACTCAAAACTCT+TGG | 0.527301 | 3.3:-95520250 | MS.gene063116:CDS |
GCAGAAATTGGCTGATTTGG+AGG | 0.528457 | 3.3:-95520458 | MS.gene063116:intron |
GGACGCCAATTTATTCGTTG+TGG | 0.530603 | 3.3:+95517089 | None:intergenic |
TCAAGCATGTGGCAAGTTCA+GGG | 0.531108 | 3.3:+95517931 | None:intergenic |
AGGTTTGTCGTTAGGAGCAG+AGG | 0.532676 | 3.3:+95520820 | None:intergenic |
GGAATTAACATCACCTGACT+TGG | 0.533236 | 3.3:+95520619 | None:intergenic |
TCCACCATCTTACTATGGGC+GGG | 0.533280 | 3.3:-95517069 | MS.gene063116:CDS |
TTCTCCTTGGCGAGAACGGG+AGG | 0.534154 | 3.3:+95520800 | None:intergenic |
AACTTAGAATCTGAGTCAGC+AGG | 0.536668 | 3.3:+95519574 | None:intergenic |
GTAGTAGAAGTAGTTCGATC+GGG | 0.539289 | 3.3:+95520845 | None:intergenic |
TTTATCTCTGTAAATATCCA+GGG | 0.542057 | 3.3:+95517731 | None:intergenic |
TCTTGCGATCAGTTGTTCGA+TGG | 0.544926 | 3.3:+95520907 | None:intergenic |
AACTTTAATAAGTGCACCAC+GGG | 0.546118 | 3.3:+95517905 | None:intergenic |
CGCAGAAAATTGTGAAGATG+AGG | 0.547997 | 3.3:-95519461 | MS.gene063116:CDS |
CATTGGGGTTCAGATACAAA+AGG | 0.548625 | 3.3:-95517632 | MS.gene063116:intron |
TTATTTGGTGTACAAATCTG+TGG | 0.548788 | 3.3:-95518610 | MS.gene063116:CDS |
TACCCAGTCAGCTGCAGAGT+CGG | 0.552423 | 3.3:+95517022 | None:intergenic |
ATAGCAAACTTTAGCTCTTG+GGG | 0.552673 | 3.3:-95518122 | MS.gene063116:CDS |
ATTGTTGTGAATAAGGGTGC+TGG | 0.557588 | 3.3:-95518493 | MS.gene063116:CDS |
ATAGGGTCAAGCTTCAGAAT+GGG | 0.559018 | 3.3:-95518662 | MS.gene063116:intron |
AATTTGCAAGTAGTGGGGAA+TGG | 0.559807 | 3.3:-95517999 | MS.gene063116:CDS |
CACTACTTGCAAATTATTAG+GGG | 0.560194 | 3.3:+95518007 | None:intergenic |
GGCGTCCACCATCTTACTAT+GGG | 0.561761 | 3.3:-95517073 | MS.gene063116:CDS |
TTGTGCGGTTACATCTGACT+TGG | 0.563691 | 3.3:-95519656 | MS.gene063116:CDS |
AGCGAAAATGGAGGGTGGCG+AGG | 0.566641 | 3.3:-95520969 | None:intergenic |
AGATTTCATTGATATAAACA+TGG | 0.570150 | 3.3:-95518530 | MS.gene063116:CDS |
GCTAGTGCAGTGACAATACA+TGG | 0.572548 | 3.3:-95518098 | MS.gene063116:CDS |
GTCCACCATCTTACTATGGG+CGG | 0.574224 | 3.3:-95517070 | MS.gene063116:CDS |
GAAGACGTTCACGTTTGAGT+TGG | 0.577856 | 3.3:+95520765 | None:intergenic |
ATTTAGAGAGCGAAAATGGA+GGG | 0.578238 | 3.3:-95520977 | None:intergenic |
GATGAGGAGACGGAAAATGA+AGG | 0.581481 | 3.3:-95519445 | MS.gene063116:intron |
TATACGTAATCCCAGTCAGC+AGG | 0.583058 | 3.3:+95518047 | None:intergenic |
ATTACGTATATCAGTGTACC+AGG | 0.583452 | 3.3:-95518034 | MS.gene063116:CDS |
TTATTCAGAATAAGTCAAAA+GGG | 0.583832 | 3.3:-95519738 | MS.gene063116:intron |
ATAAGATCTGAATCAGAGGC+AGG | 0.586531 | 3.3:-95519270 | MS.gene063116:CDS |
GGCGAGGATGATTCTGGGAA+GGG | 0.586709 | 3.3:-95520953 | MS.gene063116:CDS |
ACTTGGCAATGTTTGGACAA+AGG | 0.587871 | 3.3:+95520636 | None:intergenic |
GTGCAGTGACAATACATGGC+AGG | 0.591689 | 3.3:-95518094 | MS.gene063116:CDS |
TCATCCCGCCCATAGTAAGA+TGG | 0.591793 | 3.3:+95517065 | None:intergenic |
TTACTTGGCAAAGTTCCAGA+TGG | 0.593149 | 3.3:-95516524 | MS.gene063116:CDS |
GGGCACATCCAGATACTGTA+GGG | 0.597587 | 3.3:-95518588 | MS.gene063116:CDS |
AAATTGTGAAGATGAGGAGA+CGG | 0.597649 | 3.3:-95519455 | MS.gene063116:CDS |
CCATTCCAACAAGAACCGCC+TGG | 0.597793 | 3.3:+95517160 | None:intergenic |
CCAGTCAGCTGCAGAGTCGG+AGG | 0.597833 | 3.3:+95517025 | None:intergenic |
GATTTCATTGATATAAACAT+GGG | 0.598109 | 3.3:-95518529 | MS.gene063116:CDS |
CAGAAATTGGCTGATTTGGA+GGG | 0.598151 | 3.3:-95520457 | MS.gene063116:CDS |
GCCACATGCTTGATTGCCCG+TGG | 0.599335 | 3.3:-95517921 | MS.gene063116:CDS |
GGGGCACATCCAGATACTGT+AGG | 0.600909 | 3.3:-95518589 | MS.gene063116:CDS |
TGGCGAGGATGATTCTGGGA+AGG | 0.606139 | 3.3:-95520954 | MS.gene063116:CDS |
ACTTTGCAAACTCTCCGGAA+AGG | 0.609314 | 3.3:+95519129 | None:intergenic |
CAAACCTCCCGTTCTCGCCA+AGG | 0.612861 | 3.3:-95520804 | MS.gene063116:CDS |
CGCCATCAGTCTGATGATGA+CGG | 0.614570 | 3.3:-95519610 | MS.gene063116:CDS |
CAAGCTTAGATCAGTTTCTG+GGG | 0.615452 | 3.3:+95519233 | None:intergenic |
GATGTTATAAAAGATGATGA+TGG | 0.618144 | 3.3:-95519538 | MS.gene063116:CDS |
CGGAGGCCATCAGTGTCTCA+AGG | 0.618970 | 3.3:+95517042 | None:intergenic |
TGATGATGACGGCTCTTGTG+GGG | 0.619036 | 3.3:-95519599 | MS.gene063116:CDS |
AGATTTCCAACAGTGGTCAA+GGG | 0.619386 | 3.3:+95519153 | None:intergenic |
CTGCATAAGATCTGAATCAG+AGG | 0.625016 | 3.3:-95519274 | MS.gene063116:CDS |
TGACAATACATGGCAGGTCA+CGG | 0.625204 | 3.3:-95518088 | MS.gene063116:CDS |
TCCCGCCCATAGTAAGATGG+TGG | 0.627157 | 3.3:+95517068 | None:intergenic |
AGCCGTCATCATCAGACTGA+TGG | 0.627690 | 3.3:+95519608 | None:intergenic |
ACTTGTAGGTACATACCTGT+TGG | 0.629119 | 3.3:-95517128 | MS.gene063116:CDS |
GGATGACCTTGAGACACTGA+TGG | 0.629574 | 3.3:-95517048 | MS.gene063116:CDS |
GAGTGTTGATGACCAAATTG+TGG | 0.636784 | 3.3:-95519304 | MS.gene063116:CDS |
GTAGAAGTAGTTCGATCGGG+AGG | 0.637202 | 3.3:+95520848 | None:intergenic |
CTAATAATTTGCAAGTAGTG+GGG | 0.639061 | 3.3:-95518004 | MS.gene063116:CDS |
ACCACGGGCAATCAAGCATG+TGG | 0.640032 | 3.3:+95517920 | None:intergenic |
TGATGACAATGGTTCTTGTG+CGG | 0.672149 | 3.3:-95519671 | MS.gene063116:CDS |
GACTTGGAAAACAAAGACGA+TGG | 0.672348 | 3.3:-95519640 | MS.gene063116:CDS |
ATTTGGTGTACAAATCTGTG+GGG | 0.684676 | 3.3:-95518608 | MS.gene063116:CDS |
TGTGTTTCGTCTGATGACAA+TGG | 0.684701 | 3.3:-95519682 | MS.gene063116:CDS |
GTTGATGACCAAATTGTGGA+CGG | 0.696468 | 3.3:-95519300 | MS.gene063116:CDS |
TAGAGAGCGAAAATGGAGGG+TGG | 0.698133 | 3.3:-95520974 | None:intergenic |
GAAAGGGAGATTTCCAACAG+TGG | 0.699664 | 3.3:+95519146 | None:intergenic |
TAACTTTAATAAGTGCACCA+CGG | 0.702021 | 3.3:+95517904 | None:intergenic |
TTAGGAGCTGAAATAACATG+CGG | 0.710264 | 3.3:-95519105 | MS.gene063116:CDS |
TAGGGGTGGAGACTACCAGG+CGG | 0.796234 | 3.3:-95517175 | MS.gene063116:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTGTTTATTAATTTACAA+GGG | - | chr3.3:95516923-95516942 | MS.gene063116:intron | 10.0% |
!!! | TAAAATCTTAATTTTATACA+AGG | + | chr3.3:95520609-95520628 | None:intergenic | 10.0% |
!! | AATCTAATATTATAATATCC+TGG | - | chr3.3:95520826-95520845 | MS.gene063116:CDS | 15.0% |
!! | ATTGTTTATTAATTTACAAG+GGG | - | chr3.3:95516924-95516943 | MS.gene063116:intron | 15.0% |
!! | CAATTGTTTATTAATTTACA+AGG | - | chr3.3:95516922-95516941 | MS.gene063116:intron | 15.0% |
!!! | ATAATTTTGCTTTTGTAATA+GGG | - | chr3.3:95518749-95518768 | MS.gene063116:intron | 15.0% |
!!! | ATACAAAAGGTATATTTTAT+TGG | - | chr3.3:95519809-95519828 | MS.gene063116:intron | 15.0% |
!!! | GTGTGTTTTTAATTTTAATA+TGG | - | chr3.3:95517598-95517617 | MS.gene063116:intron | 15.0% |
!! | AAATATAATGAATAAGTGTC+AGG | + | chr3.3:95520576-95520595 | None:intergenic | 20.0% |
!! | AATTAAAACTGAGTTCTTAA+AGG | + | chr3.3:95517644-95517663 | None:intergenic | 20.0% |
!! | AATTTGAGCAATGATAATAA+AGG | + | chr3.3:95517565-95517584 | None:intergenic | 20.0% |
!! | AGATTTCATTGATATAAACA+TGG | - | chr3.3:95518898-95518917 | MS.gene063116:intron | 20.0% |
!! | AGCTATTTATATAGAAAAGA+AGG | + | chr3.3:95516699-95516718 | None:intergenic | 20.0% |
!! | ATGTGTATTTAAAAATCTAC+AGG | + | chr3.3:95517044-95517063 | None:intergenic | 20.0% |
!! | ATTATTCAGAATAAGTCAAA+AGG | - | chr3.3:95517689-95517708 | MS.gene063116:CDS | 20.0% |
!! | GATTTCATTGATATAAACAT+GGG | - | chr3.3:95518899-95518918 | MS.gene063116:intron | 20.0% |
!! | GCTATTTATATAGAAAAGAA+GGG | + | chr3.3:95516698-95516717 | None:intergenic | 20.0% |
!! | TTATTCAGAATAAGTCAAAA+GGG | - | chr3.3:95517690-95517709 | MS.gene063116:CDS | 20.0% |
!! | TTGTTTATTAATTTACAAGG+GGG | - | chr3.3:95516925-95516944 | MS.gene063116:intron | 20.0% |
!! | TTTCATAGCAATTATGAATT+CGG | + | chr3.3:95517268-95517287 | None:intergenic | 20.0% |
!!! | AATTATTGGTTCCTATATTA+AGG | + | chr3.3:95518573-95518592 | None:intergenic | 20.0% |
!!! | ACTTGATAAATTCATTTTAG+GGG | + | chr3.3:95518514-95518533 | None:intergenic | 20.0% |
!!! | AGAAAATAGTTTTGTTTAAC+AGG | - | chr3.3:95520729-95520748 | MS.gene063116:intron | 20.0% |
!!! | ATATTATATGCTGTGTTTTA+GGG | - | chr3.3:95520235-95520254 | MS.gene063116:intron | 20.0% |
!!! | ATTTTTAAATACACATCAAG+AGG | - | chr3.3:95517048-95517067 | MS.gene063116:CDS | 20.0% |
!!! | CACTTGATAAATTCATTTTA+GGG | + | chr3.3:95518515-95518534 | None:intergenic | 20.0% |
!!! | CATAATTTTGCTTTTGTAAT+AGG | - | chr3.3:95518748-95518767 | MS.gene063116:intron | 20.0% |
!!! | TATATTATATGCTGTGTTTT+AGG | - | chr3.3:95520234-95520253 | MS.gene063116:intron | 20.0% |
!!! | TATATTTTGATACCAATTTC+AGG | - | chr3.3:95518455-95518474 | MS.gene063116:CDS | 20.0% |
!!! | TCACTTGATAAATTCATTTT+AGG | + | chr3.3:95518516-95518535 | None:intergenic | 20.0% |
!!! | TTTTTAAATACACATCAAGA+GGG | - | chr3.3:95517049-95517068 | MS.gene063116:CDS | 20.0% |
! | AAAAGAATCGTTTAACAGTA+TGG | + | chr3.3:95520854-95520873 | None:intergenic | 25.0% |
! | AAACATTGATGAGTGTATAA+GGG | - | chr3.3:95520039-95520058 | MS.gene063116:intron | 25.0% |
! | AAAGAATCGTTTAACAGTAT+GGG | + | chr3.3:95520853-95520872 | None:intergenic | 25.0% |
! | ATTATTCATCAATATGCTAC+TGG | - | chr3.3:95517475-95517494 | MS.gene063116:intron | 25.0% |
! | ATTGACATTGTTGTGAATAA+GGG | - | chr3.3:95518929-95518948 | MS.gene063116:intron | 25.0% |
! | CAAATAAATCTTCAGATGAA+TGG | + | chr3.3:95518805-95518824 | None:intergenic | 25.0% |
! | CATCAATGTTTCATATTCTT+TGG | + | chr3.3:95520030-95520049 | None:intergenic | 25.0% |
! | CATTCATCTGAAGATTTATT+TGG | - | chr3.3:95518803-95518822 | MS.gene063116:intron | 25.0% |
! | GAAAATACCTTTATAGTTAC+TGG | + | chr3.3:95519031-95519050 | None:intergenic | 25.0% |
! | GATGTTATAAAAGATGATGA+TGG | - | chr3.3:95517890-95517909 | MS.gene063116:intron | 25.0% |
! | TATCTTAAGCAAACATATTG+CGG | + | chr3.3:95519213-95519232 | None:intergenic | 25.0% |
! | TATTCACAACAATGTCAATA+GGG | + | chr3.3:95518928-95518947 | None:intergenic | 25.0% |
! | TATTGACATTGTTGTGAATA+AGG | - | chr3.3:95518928-95518947 | MS.gene063116:intron | 25.0% |
! | TGTTTATTAATTTACAAGGG+GGG | - | chr3.3:95516926-95516945 | MS.gene063116:intron | 25.0% |
! | TTATGTAGATGCAACAAATT+TGG | - | chr3.3:95519983-95520002 | MS.gene063116:intron | 25.0% |
! | TTATTCACAACAATGTCAAT+AGG | + | chr3.3:95518929-95518948 | None:intergenic | 25.0% |
! | TTTATCTCTGTAAATATCCA+GGG | + | chr3.3:95519700-95519719 | None:intergenic | 25.0% |
!! | AATAATGATCGATTCAAATG+TGG | + | chr3.3:95517675-95517694 | None:intergenic | 25.0% |
!! | AATCTTTATTTCGATAAGAG+AGG | + | chr3.3:95520633-95520652 | None:intergenic | 25.0% |
!! | ACTAAGAGCATATAATTTGT+GGG | - | chr3.3:95520071-95520090 | MS.gene063116:intron | 25.0% |
!! | ATCTTTATTTCGATAAGAGA+GGG | + | chr3.3:95520632-95520651 | None:intergenic | 25.0% |
!! | CGATTCTTTTTATTATACAC+AGG | - | chr3.3:95520864-95520883 | MS.gene063116:CDS | 25.0% |
!! | TAAGCATTTGATTTATGCTT+TGG | + | chr3.3:95520943-95520962 | None:intergenic | 25.0% |
!! | TTCAAAGATTTTGTGCATTT+TGG | - | chr3.3:95519766-95519785 | MS.gene063116:intron | 25.0% |
!!! | AAAAGAAGCTTATTGATTTC+AGG | - | chr3.3:95518234-95518253 | MS.gene063116:intron | 25.0% |
!!! | AAAATTTTTCAAAACTCTGC+TGG | - | chr3.3:95518600-95518619 | MS.gene063116:CDS | 25.0% |
!!! | AAAGAAGCTTATTGATTTCA+GGG | - | chr3.3:95518235-95518254 | MS.gene063116:intron | 25.0% |
!!! | AAATTTGTTGCATCTACATA+AGG | + | chr3.3:95519984-95520003 | None:intergenic | 25.0% |
!!! | AAATTTTTCAAAACTCTGCT+GGG | - | chr3.3:95518601-95518620 | MS.gene063116:CDS | 25.0% |
!!! | ATGTTTTTTCATTTGTAGAC+TGG | - | chr3.3:95519454-95519473 | MS.gene063116:CDS | 25.0% |
!!! | TAACAAGATTTTTTTTGTCC+TGG | + | chr3.3:95519177-95519196 | None:intergenic | 25.0% |
!!! | TATTATATGCTGTGTTTTAG+GGG | - | chr3.3:95520236-95520255 | MS.gene063116:intron | 25.0% |
!!! | TGTTGTTTTTTTCTAGCAAA+TGG | + | chr3.3:95520167-95520186 | None:intergenic | 25.0% |
AACATTGATGAGTGTATAAG+GGG | - | chr3.3:95520040-95520059 | MS.gene063116:intron | 30.0% | |
AAGACAAATACCAAACTATG+TGG | + | chr3.3:95518487-95518506 | None:intergenic | 30.0% | |
ACTTTAGTGCTTATAGTCTA+TGG | - | chr3.3:95518023-95518042 | MS.gene063116:CDS | 30.0% | |
AGACAAATACCAAACTATGT+GGG | + | chr3.3:95518486-95518505 | None:intergenic | 30.0% | |
AGCTGTTGAACTAATAGAAA+AGG | - | chr3.3:95518865-95518884 | MS.gene063116:intron | 30.0% | |
ATCCTGAGTATGATGTATAT+AGG | - | chr3.3:95518412-95518431 | MS.gene063116:CDS | 30.0% | |
ATGAATAATTACAAGCGCAT+TGG | + | chr3.3:95517464-95517483 | None:intergenic | 30.0% | |
CAAGAAAACTGGAAACAAAA+GGG | + | chr3.3:95520439-95520458 | None:intergenic | 30.0% | |
CACTACTTGCAAATTATTAG+GGG | + | chr3.3:95519424-95519443 | None:intergenic | 30.0% | |
CCACTACTTGCAAATTATTA+GGG | + | chr3.3:95519425-95519444 | None:intergenic | 30.0% | |
CGATATTCCAGTAACTATAA+AGG | - | chr3.3:95519021-95519040 | MS.gene063116:intron | 30.0% | |
CTGGATATTTACAGAGATAA+AGG | - | chr3.3:95519699-95519718 | MS.gene063116:CDS | 30.0% | |
CTTTATCTCTGTAAATATCC+AGG | + | chr3.3:95519701-95519720 | None:intergenic | 30.0% | |
GAAACATTGATGAGTGTATA+AGG | - | chr3.3:95520038-95520057 | MS.gene063116:intron | 30.0% | |
GAACGTTGAAACCTTAATAT+AGG | - | chr3.3:95518559-95518578 | MS.gene063116:CDS | 30.0% | |
GACTACATGTAAAAGATTGA+AGG | + | chr3.3:95520139-95520158 | None:intergenic | 30.0% | |
GCAAAAGAAAAGAAAAGATG+AGG | + | chr3.3:95518686-95518705 | None:intergenic | 30.0% | |
GGACACAATGAAATTTGTAT+CGG | - | chr3.3:95519070-95519089 | MS.gene063116:intron | 30.0% | |
TAACTTTAATAAGTGCACCA+CGG | + | chr3.3:95519527-95519546 | None:intergenic | 30.0% | |
TAATAAAGGAACACTGACAA+AGG | + | chr3.3:95517551-95517570 | None:intergenic | 30.0% | |
TCAACTAGAATTGAATGCAA+AGG | + | chr3.3:95518075-95518094 | None:intergenic | 30.0% | |
TCAAGAAAACTGGAAACAAA+AGG | + | chr3.3:95520440-95520459 | None:intergenic | 30.0% | |
TCCTGAGTATGATGTATATA+GGG | - | chr3.3:95518413-95518432 | MS.gene063116:CDS | 30.0% | |
TTCAATCCGTTAGAAGATAA+AGG | + | chr3.3:95517079-95517098 | None:intergenic | 30.0% | |
TTGCATGAATAGAGAAGAAA+GGG | + | chr3.3:95520688-95520707 | None:intergenic | 30.0% | |
TTTGCATGAATAGAGAAGAA+AGG | + | chr3.3:95520689-95520708 | None:intergenic | 30.0% | |
TTTGTTTAACAGGATGTAGT+TGG | - | chr3.3:95520739-95520758 | MS.gene063116:intron | 30.0% | |
! | AAACGACAGTTTTCTTGATA+AGG | + | chr3.3:95516838-95516857 | None:intergenic | 30.0% |
! | AAACTATTTTCTGCTGTCTT+CGG | + | chr3.3:95520721-95520740 | None:intergenic | 30.0% |
! | AAGATGTTCAGAAGCTTTTA+TGG | - | chr3.3:95517128-95517147 | MS.gene063116:CDS | 30.0% |
! | CCTAATAATTTGCAAGTAGT+GGG | - | chr3.3:95519423-95519442 | MS.gene063116:intron | 30.0% |
! | CTAATAATTTGCAAGTAGTG+GGG | - | chr3.3:95519424-95519443 | MS.gene063116:intron | 30.0% |
! | GACTAAGAGCATATAATTTG+TGG | - | chr3.3:95520070-95520089 | MS.gene063116:intron | 30.0% |
! | TGCGGTTTTTCTTTTCTTTT+GGG | + | chr3.3:95517951-95517970 | None:intergenic | 30.0% |
! | TTTCTAGTGTACTACTATGT+AGG | + | chr3.3:95517437-95517456 | None:intergenic | 30.0% |
!! | TATTTGGTGTACAAATCTGT+GGG | - | chr3.3:95518819-95518838 | MS.gene063116:intron | 30.0% |
!! | TTATTTGGTGTACAAATCTG+TGG | - | chr3.3:95518818-95518837 | MS.gene063116:intron | 30.0% |
!! | TTTATCTTCTAACGGATTGA+AGG | - | chr3.3:95517078-95517097 | MS.gene063116:CDS | 30.0% |
!!! | ACTGTTTAGTGTTTGTTTTG+AGG | + | chr3.3:95519924-95519943 | None:intergenic | 30.0% |
!!! | GTATATTTTATTGGTGCTGA+TGG | - | chr3.3:95519818-95519837 | MS.gene063116:intron | 30.0% |
AAATTGTGAAGATGAGGAGA+CGG | - | chr3.3:95517973-95517992 | MS.gene063116:CDS | 35.0% | |
AACTTTAATAAGTGCACCAC+GGG | + | chr3.3:95519526-95519545 | None:intergenic | 35.0% | |
AATCTACAGGATAACCCATA+AGG | + | chr3.3:95517031-95517050 | None:intergenic | 35.0% | |
AATGCCGTCAAAAACAAAGA+TGG | - | chr3.3:95517713-95517732 | MS.gene063116:CDS | 35.0% | |
ACCTAGTGCAATAGATGAAT+GGG | + | chr3.3:95519243-95519262 | None:intergenic | 35.0% | |
AGGCATAACATGAACAACAA+CGG | + | chr3.3:95517232-95517251 | None:intergenic | 35.0% | |
AGTAGTAGAAGTAGTTCGAT+CGG | + | chr3.3:95516587-95516606 | None:intergenic | 35.0% | |
AGTTCAAAGTTCCAGAACAT+AGG | + | chr3.3:95519121-95519140 | None:intergenic | 35.0% | |
ATCTACAGGATAACCCATAA+GGG | + | chr3.3:95517030-95517049 | None:intergenic | 35.0% | |
ATTACGTATATCAGTGTACC+AGG | - | chr3.3:95519394-95519413 | MS.gene063116:intron | 35.0% | |
CAGAACAAAACAAAGAGGAT+GGG | + | chr3.3:95518652-95518671 | None:intergenic | 35.0% | |
CATAAAATGAGATCGAGACA+AGG | + | chr3.3:95519559-95519578 | None:intergenic | 35.0% | |
CCATGATATTCAAGCATTCA+AGG | - | chr3.3:95516861-95516880 | MS.gene063116:intron | 35.0% | |
CCCACTACTTGCAAATTATT+AGG | + | chr3.3:95519426-95519445 | None:intergenic | 35.0% | |
CCTTGAATGCTTGAATATCA+TGG | + | chr3.3:95516864-95516883 | None:intergenic | 35.0% | |
CGATTATCAGAGATGTTACT+TGG | - | chr3.3:95520889-95520908 | MS.gene063116:CDS | 35.0% | |
CTAATACTTTGCAAACTCTC+CGG | + | chr3.3:95518307-95518326 | None:intergenic | 35.0% | |
GAAGCTATCAAGATGCTAAA+TGG | + | chr3.3:95519099-95519118 | None:intergenic | 35.0% | |
GGTAAGCCTTTATCTTCTAA+CGG | - | chr3.3:95517070-95517089 | MS.gene063116:CDS | 35.0% | |
TAATGCTAGTTGTCTTCATC+AGG | - | chr3.3:95519603-95519622 | MS.gene063116:CDS | 35.0% | |
TACCTAGTGCAATAGATGAA+TGG | + | chr3.3:95519244-95519263 | None:intergenic | 35.0% | |
TAGCTTCATATTGCTGAAAC+AGG | - | chr3.3:95518098-95518117 | MS.gene063116:CDS | 35.0% | |
TATTCAAGCATTCAAGGAAC+AGG | - | chr3.3:95516867-95516886 | MS.gene063116:intron | 35.0% | |
TCAAGCTTAGATCAGTTTCT+GGG | + | chr3.3:95518199-95518218 | None:intergenic | 35.0% | |
TCCATGCTAAATGCAACAAT+AGG | - | chr3.3:95519049-95519068 | MS.gene063116:intron | 35.0% | |
TCCCTATATACATCATACTC+AGG | + | chr3.3:95518417-95518436 | None:intergenic | 35.0% | |
TCCTATTGTTGCATTTAGCA+TGG | + | chr3.3:95519053-95519072 | None:intergenic | 35.0% | |
TGAAATAACATGCGGTGAAA+TGG | - | chr3.3:95518331-95518350 | MS.gene063116:intron | 35.0% | |
TGAGATAGTATATCCTCCAT+AGG | - | chr3.3:95518533-95518552 | MS.gene063116:CDS | 35.0% | |
TGGTTCCACAACGAATAAAT+TGG | - | chr3.3:95520334-95520353 | MS.gene063116:CDS | 35.0% | |
TGTCTTATGCCAAGAATGAA+CGG | - | chr3.3:95519957-95519976 | MS.gene063116:intron | 35.0% | |
TTAGGAGCTGAAATAACATG+CGG | - | chr3.3:95518323-95518342 | MS.gene063116:intron | 35.0% | |
TTCAAGCTTAGATCAGTTTC+TGG | + | chr3.3:95518200-95518219 | None:intergenic | 35.0% | |
TTCATCTATTGCACTAGGTA+CGG | - | chr3.3:95519244-95519263 | MS.gene063116:CDS | 35.0% | |
TTGTGCAGAACAAAACAAAG+AGG | + | chr3.3:95518657-95518676 | None:intergenic | 35.0% | |
TTTAACAGGATGTAGTTGGT+AGG | - | chr3.3:95520743-95520762 | MS.gene063116:intron | 35.0% | |
TTTGTCCTGGAAAACGTAAA+AGG | + | chr3.3:95519164-95519183 | None:intergenic | 35.0% | |
! | AAGGAAAGGTGTGAAGTTAA+TGG | - | chr3.3:95517097-95517116 | MS.gene063116:CDS | 35.0% |
! | AATGTGCACAAATCTTTTGG+AGG | - | chr3.3:95518355-95518374 | MS.gene063116:intron | 35.0% |
! | ACAGTTTTCTTGATAAGGAC+AGG | + | chr3.3:95516833-95516852 | None:intergenic | 35.0% |
! | CCCTAATAATTTGCAAGTAG+TGG | - | chr3.3:95519422-95519441 | MS.gene063116:intron | 35.0% |
! | CCTTTGATGTAAAGAAGTGT+CGG | - | chr3.3:95517386-95517405 | MS.gene063116:intron | 35.0% |
! | CTCATCTTCACAATTTTCTG+CGG | + | chr3.3:95517969-95517988 | None:intergenic | 35.0% |
! | CTGCGGTTTTTCTTTTCTTT+TGG | + | chr3.3:95517952-95517971 | None:intergenic | 35.0% |
! | CTTGTCTCGATCTCATTTTA+TGG | - | chr3.3:95519557-95519576 | MS.gene063116:CDS | 35.0% |
! | GCGGTTTTTCTTTTCTTTTG+GGG | + | chr3.3:95517950-95517969 | None:intergenic | 35.0% |
! | TAATTTACAAGGGGGGTTTT+TGG | - | chr3.3:95516933-95516952 | MS.gene063116:intron | 35.0% |
! | TAGCAATTATGAATTCGGTG+AGG | + | chr3.3:95517263-95517282 | None:intergenic | 35.0% |
! | TTGAGTTTGGCATCAGTTTT+GGG | + | chr3.3:95517172-95517191 | None:intergenic | 35.0% |
!! | ATAGCAAACTTTAGCTCTTG+GGG | - | chr3.3:95519306-95519325 | MS.gene063116:CDS | 35.0% |
!! | ATTTGGTGTACAAATCTGTG+GGG | - | chr3.3:95518820-95518839 | MS.gene063116:intron | 35.0% |
!! | CATTTTGGTCTTCAACATTG+GGG | - | chr3.3:95519781-95519800 | MS.gene063116:intron | 35.0% |
!! | GATAGCAAACTTTAGCTCTT+GGG | - | chr3.3:95519305-95519324 | MS.gene063116:CDS | 35.0% |
!! | GCATTTTGGTCTTCAACATT+GGG | - | chr3.3:95519780-95519799 | MS.gene063116:intron | 35.0% |
!! | TGATAGCAAACTTTAGCTCT+TGG | - | chr3.3:95519304-95519323 | MS.gene063116:CDS | 35.0% |
!! | TGCATTTTGGTCTTCAACAT+TGG | - | chr3.3:95519779-95519798 | MS.gene063116:intron | 35.0% |
!! | TTTCTTTTCTTTTGGGGACA+AGG | + | chr3.3:95517944-95517963 | None:intergenic | 35.0% |
!! | TTTGAGTTTGGCATCAGTTT+TGG | + | chr3.3:95517173-95517192 | None:intergenic | 35.0% |
!!! | ACCACCATCTTTGTTTTTGA+CGG | + | chr3.3:95517720-95517739 | None:intergenic | 35.0% |
!!! | GTCCTTTTCTGAAATCTGAA+GGG | - | chr3.3:95516999-95517018 | MS.gene063116:intron | 35.0% |
!!! | TCCTTTTCTGAAATCTGAAG+GGG | - | chr3.3:95517000-95517019 | MS.gene063116:intron | 35.0% |
!!! | TGTCCTTTTCTGAAATCTGA+AGG | - | chr3.3:95516998-95517017 | MS.gene063116:intron | 35.0% |
AAAACAAAGAGGATGGGAGA+AGG | + | chr3.3:95518646-95518665 | None:intergenic | 40.0% | |
AAACACAGACTTGTCGATAG+TGG | - | chr3.3:95517285-95517304 | MS.gene063116:intron | 40.0% | |
AACTTAGAATCTGAGTCAGC+AGG | + | chr3.3:95517857-95517876 | None:intergenic | 40.0% | |
AATAGGGTCAAGCTTCAGAA+TGG | - | chr3.3:95518765-95518784 | MS.gene063116:intron | 40.0% | |
AATGGCTTAGCTACACTTGT+AGG | - | chr3.3:95520286-95520305 | MS.gene063116:CDS | 40.0% | |
ACATAAGGACCGTTCATTCT+TGG | + | chr3.3:95519969-95519988 | None:intergenic | 40.0% | |
ACCCATTCATCTATTGCACT+AGG | - | chr3.3:95519239-95519258 | MS.gene063116:CDS | 40.0% | |
ACTCAAAACTCTTGGTCTCT+TGG | - | chr3.3:95517186-95517205 | MS.gene063116:intron | 40.0% | |
ACTTGGCAATGTTTGGACAA+AGG | + | chr3.3:95516795-95516814 | None:intergenic | 40.0% | |
ACTTGTAGGTACATACCTGT+TGG | - | chr3.3:95520300-95520319 | MS.gene063116:CDS | 40.0% | |
AGATAAAGGAACAGCGACAT+TGG | - | chr3.3:95519713-95519732 | MS.gene063116:CDS | 40.0% | |
AGATTTCCAACAGTGGTCAA+GGG | + | chr3.3:95518278-95518297 | None:intergenic | 40.0% | |
AGTGCAGAAATTGGCTGATT+TGG | - | chr3.3:95516967-95516986 | MS.gene063116:intron | 40.0% | |
AGTGTTGTAGAAGTAGCTTC+AGG | - | chr3.3:95518992-95519011 | MS.gene063116:intron | 40.0% | |
ATAAGATCTGAATCAGAGGC+AGG | - | chr3.3:95518158-95518177 | MS.gene063116:CDS | 40.0% | |
ATAGGGTCAAGCTTCAGAAT+GGG | - | chr3.3:95518766-95518785 | MS.gene063116:intron | 40.0% | |
ATGCATAGCTCCTGTTAAGA+AGG | - | chr3.3:95516543-95516562 | MS.gene063116:CDS | 40.0% | |
ATGTGGGAATTGCCTGAAAT+TGG | + | chr3.3:95518470-95518489 | None:intergenic | 40.0% | |
CAAATTATTAGGGGCTTTCC+TGG | + | chr3.3:95519415-95519434 | None:intergenic | 40.0% | |
CAAGCTTAGATCAGTTTCTG+GGG | + | chr3.3:95518198-95518217 | None:intergenic | 40.0% | |
CATTGGGGTTCAGATACAAA+AGG | - | chr3.3:95519796-95519815 | MS.gene063116:intron | 40.0% | |
CCGACACTTCTTTACATCAA+AGG | + | chr3.3:95517389-95517408 | None:intergenic | 40.0% | |
CGAATGAAGTCCTTCTTAAC+AGG | + | chr3.3:95516556-95516575 | None:intergenic | 40.0% | |
CGCAGAAAATTGTGAAGATG+AGG | - | chr3.3:95517967-95517986 | MS.gene063116:CDS | 40.0% | |
CTGCATAAGATCTGAATCAG+AGG | - | chr3.3:95518154-95518173 | MS.gene063116:CDS | 40.0% | |
CTGGAAAACGTAAAAGGACT+TGG | + | chr3.3:95519158-95519177 | None:intergenic | 40.0% | |
GACTTGGAAAACAAAGACGA+TGG | - | chr3.3:95517788-95517807 | MS.gene063116:intron | 40.0% | |
GATAAAGGAACAGCGACATT+GGG | - | chr3.3:95519714-95519733 | MS.gene063116:CDS | 40.0% | |
GATGCCAAACTCAAAACTCT+TGG | - | chr3.3:95517178-95517197 | MS.gene063116:intron | 40.0% | |
GCAGAACAAAACAAAGAGGA+TGG | + | chr3.3:95518653-95518672 | None:intergenic | 40.0% | |
GCGTTTAGATTTCTTCTCCT+TGG | + | chr3.3:95516644-95516663 | None:intergenic | 40.0% | |
GCTTACGATAGAGCTGAAAA+TGG | - | chr3.3:95520958-95520977 | MS.gene063116:CDS | 40.0% | |
GGAATTAACATCACCTGACT+TGG | + | chr3.3:95516812-95516831 | None:intergenic | 40.0% | |
GGCATAACATGAACAACAAC+GGG | + | chr3.3:95517231-95517250 | None:intergenic | 40.0% | |
GGTTTCAACGTTCAAACCTA+TGG | + | chr3.3:95518552-95518571 | None:intergenic | 40.0% | |
GTAGTAGAAGTAGTTCGATC+GGG | + | chr3.3:95516586-95516605 | None:intergenic | 40.0% | |
GTTCATTCTTGGCATAAGAC+AGG | + | chr3.3:95519958-95519977 | None:intergenic | 40.0% | |
TCACTCTGTATGTATTCTGC+AGG | - | chr3.3:95516750-95516769 | MS.gene063116:intron | 40.0% | |
TCAGGAGCAATATTGTTGCA+TGG | - | chr3.3:95519621-95519640 | MS.gene063116:CDS | 40.0% | |
TCGATGATGAGTGCAGAAAT+TGG | - | chr3.3:95516958-95516977 | MS.gene063116:intron | 40.0% | |
TGATGACAATGGTTCTTGTG+CGG | - | chr3.3:95517757-95517776 | MS.gene063116:intron | 40.0% | |
TGTGTTTCGTCTGATGACAA+TGG | - | chr3.3:95517746-95517765 | MS.gene063116:intron | 40.0% | |
TTACTTGGCAAAGTTCCAGA+TGG | - | chr3.3:95520904-95520923 | MS.gene063116:CDS | 40.0% | |
TTCAACGTTCAAACCTATGG+AGG | + | chr3.3:95518549-95518568 | None:intergenic | 40.0% | |
! | AATTCGGTGAGGAAAATGAG+AGG | + | chr3.3:95517252-95517271 | None:intergenic | 40.0% |
! | AATTTGCAAGTAGTGGGGAA+TGG | - | chr3.3:95519429-95519448 | MS.gene063116:intron | 40.0% |
! | ACAACACTTTTCATGCGCAT+TGG | + | chr3.3:95518980-95518999 | None:intergenic | 40.0% |
! | ATTGTTGTGAATAAGGGTGC+TGG | - | chr3.3:95518935-95518954 | MS.gene063116:intron | 40.0% |
! | CAAGTCCTTTTACGTTTTCC+AGG | - | chr3.3:95519156-95519175 | MS.gene063116:CDS | 40.0% |
! | CGGAGAGTTTGCAAAGTATT+AGG | - | chr3.3:95518305-95518324 | MS.gene063116:intron | 40.0% |
! | CTTGATAGCTTCCTATGTTC+TGG | - | chr3.3:95519107-95519126 | MS.gene063116:CDS | 40.0% |
! | CTTTACATCAAAGGCATGTC+CGG | + | chr3.3:95517380-95517399 | None:intergenic | 40.0% |
! | GGCAATGTGCACAAATCTTT+TGG | - | chr3.3:95518352-95518371 | MS.gene063116:intron | 40.0% |
! | TGAGTTTGGCATCAGTTTTG+GGG | + | chr3.3:95517171-95517190 | None:intergenic | 40.0% |
!! | CAGAAATTGGCTGATTTGGA+GGG | - | chr3.3:95516971-95516990 | MS.gene063116:intron | 40.0% |
!! | CTTCTAACGGATTGAAGGAA+AGG | - | chr3.3:95517083-95517102 | MS.gene063116:CDS | 40.0% |
!! | GAGTGTTGATGACCAAATTG+TGG | - | chr3.3:95518124-95518143 | MS.gene063116:CDS | 40.0% |
!! | GTTGATGACCAAATTGTGGA+CGG | - | chr3.3:95518128-95518147 | MS.gene063116:CDS | 40.0% |
!! | TACGGACAGCGTATTTTGAA+GGG | - | chr3.3:95519262-95519281 | MS.gene063116:CDS | 40.0% |
!! | TGTGGGAGTATCTTGTAAGA+GGG | - | chr3.3:95520088-95520107 | MS.gene063116:intron | 40.0% |
!! | TTGTGGGAGTATCTTGTAAG+AGG | - | chr3.3:95520087-95520106 | MS.gene063116:intron | 40.0% |
!! | TTTTGGGGACAAGGTATATC+AGG | + | chr3.3:95517935-95517954 | None:intergenic | 40.0% |
!!! | GAGACCAAGAGTTTTGAGTT+TGG | + | chr3.3:95517185-95517204 | None:intergenic | 40.0% |
!!! | GTACATACCTGTTGGTCTTT+TGG | - | chr3.3:95520308-95520327 | MS.gene063116:CDS | 40.0% |
!!! | TATATGCTGTGTTTTAGGGG+TGG | - | chr3.3:95520239-95520258 | MS.gene063116:intron | 40.0% |
AAACGTGAACGTCTTCAGGT+AGG | - | chr3.3:95516670-95516689 | MS.gene063116:intron | 45.0% | |
ACCACATCCAAAAGACCAAC+AGG | + | chr3.3:95520318-95520337 | None:intergenic | 45.0% | |
ACTCAAACGTGAACGTCTTC+AGG | - | chr3.3:95516666-95516685 | MS.gene063116:intron | 45.0% | |
ACTTTGCAAACTCTCCGGAA+AGG | + | chr3.3:95518302-95518321 | None:intergenic | 45.0% | |
ATCAAGCATGTGGCAAGTTC+AGG | + | chr3.3:95519501-95519520 | None:intergenic | 45.0% | |
CAGGCAATTCCCACATAGTT+TGG | - | chr3.3:95518474-95518493 | MS.gene063116:CDS | 45.0% | |
CTGTTGGAAATCTCCCTTTC+CGG | - | chr3.3:95518285-95518304 | MS.gene063116:intron | 45.0% | |
CTTTGCAAACTCTCCGGAAA+GGG | + | chr3.3:95518301-95518320 | None:intergenic | 45.0% | |
GAAAGGGAGATTTCCAACAG+TGG | + | chr3.3:95518285-95518304 | None:intergenic | 45.0% | |
GAAGACGTTCACGTTTGAGT+TGG | + | chr3.3:95516666-95516685 | None:intergenic | 45.0% | |
GAGATTTCCAACAGTGGTCA+AGG | + | chr3.3:95518279-95518298 | None:intergenic | 45.0% | |
GATGAGGAGACGGAAAATGA+AGG | - | chr3.3:95517983-95518002 | MS.gene063116:CDS | 45.0% | |
GCCCCTTCAGATTTCAGAAA+AGG | + | chr3.3:95517004-95517023 | None:intergenic | 45.0% | |
GCCGTCAAAAACAAAGATGG+TGG | - | chr3.3:95517716-95517735 | MS.gene063116:CDS | 45.0% | |
GCTAGTGCAGTGACAATACA+TGG | - | chr3.3:95519330-95519349 | MS.gene063116:intron | 45.0% | |
GGACGCCAATTTATTCGTTG+TGG | + | chr3.3:95520342-95520361 | None:intergenic | 45.0% | |
GGTGCAAAAGTAAAGCCATC+TGG | + | chr3.3:95520922-95520941 | None:intergenic | 45.0% | |
TATACGTAATCCCAGTCAGC+AGG | + | chr3.3:95519384-95519403 | None:intergenic | 45.0% | |
TCAAGCATGTGGCAAGTTCA+GGG | + | chr3.3:95519500-95519519 | None:intergenic | 45.0% | |
TCGTTTAACAGTATGGGACC+AGG | + | chr3.3:95520847-95520866 | None:intergenic | 45.0% | |
TCTTGCGATCAGTTGTTCGA+TGG | + | chr3.3:95516524-95516543 | None:intergenic | 45.0% | |
TGACAATACATGGCAGGTCA+CGG | - | chr3.3:95519340-95519359 | MS.gene063116:intron | 45.0% | |
TGAGTGTATAAGGGGTCTCT+TGG | - | chr3.3:95520048-95520067 | MS.gene063116:intron | 45.0% | |
TGTCCAAACATTGCCAAGTC+AGG | - | chr3.3:95516796-95516815 | MS.gene063116:intron | 45.0% | |
TTCTGCTGTCTTCGGATAGA+GGG | + | chr3.3:95520713-95520732 | None:intergenic | 45.0% | |
TTGTGCGGTTACATCTGACT+TGG | - | chr3.3:95517772-95517791 | MS.gene063116:intron | 45.0% | |
TTTCAAAACTCTGCTGGGAC+TGG | - | chr3.3:95518606-95518625 | MS.gene063116:CDS | 45.0% | |
TTTCTGCTGTCTTCGGATAG+AGG | + | chr3.3:95520714-95520733 | None:intergenic | 45.0% | |
TTTCTTCTCCTTGGCGAGAA+CGG | + | chr3.3:95516635-95516654 | None:intergenic | 45.0% | |
!! | GCAGAAATTGGCTGATTTGG+AGG | - | chr3.3:95516970-95516989 | MS.gene063116:intron | 45.0% |
!! | GTACGGACAGCGTATTTTGA+AGG | - | chr3.3:95519261-95519280 | MS.gene063116:CDS | 45.0% |
!! | GTTCAGGGCATTCAGTTTTG+TGG | + | chr3.3:95519485-95519504 | None:intergenic | 45.0% |
!! | TCACCTGACTTGGCAATGTT+TGG | + | chr3.3:95516802-95516821 | None:intergenic | 45.0% |
!!! | ACCTGTTGGTCTTTTGGATG+TGG | - | chr3.3:95520314-95520333 | MS.gene063116:CDS | 45.0% |
!!! | AAATTTTATTACTAAATTAT+TGG | + | chr3.3:95518587-95518606 | None:intergenic | 5.0% |
!!! | ATCTATTAATTTTTTTAAAA+TGG | - | chr3.3:95520512-95520531 | MS.gene063116:intron | 5.0% |
AGAACGGGAGGTTTGTCGTT+AGG | + | chr3.3:95516619-95516638 | None:intergenic | 50.0% | |
AGCCGTCATCATCAGACTGA+TGG | + | chr3.3:95517823-95517842 | None:intergenic | 50.0% | |
AGGTTTGTCGTTAGGAGCAG+AGG | + | chr3.3:95516611-95516630 | None:intergenic | 50.0% | |
CATTGTCGTGTCAGCGTTTC+GGG | - | chr3.3:95517352-95517371 | MS.gene063116:intron | 50.0% | |
CCATTGTCGTGTCAGCGTTT+CGG | - | chr3.3:95517351-95517370 | MS.gene063116:intron | 50.0% | |
CGACATTGGGACATCAGTTC+TGG | - | chr3.3:95519727-95519746 | MS.gene063116:CDS | 50.0% | |
GGATGACCTTGAGACACTGA+TGG | - | chr3.3:95520380-95520399 | MS.gene063116:CDS | 50.0% | |
GGCGTCCACCATCTTACTAT+GGG | - | chr3.3:95520355-95520374 | MS.gene063116:CDS | 50.0% | |
GGGCACATCCAGATACTGTA+GGG | - | chr3.3:95518840-95518859 | MS.gene063116:intron | 50.0% | |
GTAGAAGTAGTTCGATCGGG+AGG | + | chr3.3:95516583-95516602 | None:intergenic | 50.0% | |
GTCCACCATCTTACTATGGG+CGG | - | chr3.3:95520358-95520377 | MS.gene063116:CDS | 50.0% | |
GTGCAGTGACAATACATGGC+AGG | - | chr3.3:95519334-95519353 | MS.gene063116:intron | 50.0% | |
TCATCCCGCCCATAGTAAGA+TGG | + | chr3.3:95520366-95520385 | None:intergenic | 50.0% | |
TCCACCATCTTACTATGGGC+GGG | - | chr3.3:95520359-95520378 | MS.gene063116:CDS | 50.0% | |
TGCAGCTTCCGTCCACAATT+TGG | + | chr3.3:95518139-95518158 | None:intergenic | 50.0% | |
TGGCGTCCACCATCTTACTA+TGG | - | chr3.3:95520354-95520373 | MS.gene063116:CDS | 50.0% | |
TTCTTCTCCTTGGCGAGAAC+GGG | + | chr3.3:95516634-95516653 | None:intergenic | 50.0% | |
! | CGCCATCAGTCTGATGATGA+CGG | - | chr3.3:95517818-95517837 | MS.gene063116:intron | 50.0% |
! | CTATAGCAAGCCTGCTGACT+GGG | - | chr3.3:95519371-95519390 | MS.gene063116:intron | 50.0% |
!! | CTGATGATGACGGCTCTTGT+GGG | - | chr3.3:95517828-95517847 | MS.gene063116:intron | 50.0% |
!! | GGACAGCGTATTTTGAAGGG+AGG | - | chr3.3:95519265-95519284 | MS.gene063116:CDS | 50.0% |
!! | TCTGATGATGACGGCTCTTG+TGG | - | chr3.3:95517827-95517846 | MS.gene063116:intron | 50.0% |
!! | TGATGATGACGGCTCTTGTG+GGG | - | chr3.3:95517829-95517848 | MS.gene063116:intron | 50.0% |
!! | TTTTAGGGGTGGAGACTACC+AGG | - | chr3.3:95520250-95520269 | MS.gene063116:CDS | 50.0% |
ACAGCTCGCCCTACAGTATC+TGG | + | chr3.3:95518851-95518870 | None:intergenic | 55.0% | |
ACCACGGGCAATCAAGCATG+TGG | + | chr3.3:95519511-95519530 | None:intergenic | 55.0% | |
AGGGTGGCGAGGATGATTCT+GGG | - | chr3.3:95516470-95516489 | MS.gene063116:CDS | 55.0% | |
CCAGGCGGTTCTTGTTGGAA+TGG | - | chr3.3:95520268-95520287 | MS.gene063116:CDS | 55.0% | |
CCATTCCAACAAGAACCGCC+TGG | + | chr3.3:95520271-95520290 | None:intergenic | 55.0% | |
CCGAAACGCTGACACGACAA+TGG | + | chr3.3:95517354-95517373 | None:intergenic | 55.0% | |
CTGAAGGGGCTTGCCCTTAT+GGG | - | chr3.3:95517014-95517033 | MS.gene063116:intron | 55.0% | |
CTTGCACCCTTGACCACTGT+TGG | - | chr3.3:95518269-95518288 | MS.gene063116:intron | 55.0% | |
GAAGTAGTTCGATCGGGAGG+AGG | + | chr3.3:95516580-95516599 | None:intergenic | 55.0% | |
GACTACCAGGCGGTTCTTGT+TGG | - | chr3.3:95520263-95520282 | MS.gene063116:CDS | 55.0% | |
GCTATAGCAAGCCTGCTGAC+TGG | - | chr3.3:95519370-95519389 | MS.gene063116:intron | 55.0% | |
GGGGCACATCCAGATACTGT+AGG | - | chr3.3:95518839-95518858 | MS.gene063116:intron | 55.0% | |
TACCCAGTCAGCTGCAGAGT+CGG | + | chr3.3:95520409-95520428 | None:intergenic | 55.0% | |
TCCCGCCCATAGTAAGATGG+TGG | + | chr3.3:95520363-95520382 | None:intergenic | 55.0% | |
TCTGAAGGGGCTTGCCCTTA+TGG | - | chr3.3:95517013-95517032 | MS.gene063116:intron | 55.0% | |
! | GGCGAGGATGATTCTGGGAA+GGG | - | chr3.3:95516475-95516494 | MS.gene063116:CDS | 55.0% |
! | TGGCGAGGATGATTCTGGGA+AGG | - | chr3.3:95516474-95516493 | MS.gene063116:CDS | 55.0% |
ATGACTGCTGTGTGCAGCCC+TGG | - | chr3.3:95519680-95519699 | MS.gene063116:CDS | 60.0% | |
CAAACCTCCCGTTCTCGCCA+AGG | - | chr3.3:95516624-95516643 | MS.gene063116:intron | 60.0% | |
CGGAGGCCATCAGTGTCTCA+AGG | + | chr3.3:95520389-95520408 | None:intergenic | 60.0% | |
CTCCGACTCTGCAGCTGACT+GGG | - | chr3.3:95520404-95520423 | MS.gene063116:CDS | 60.0% | |
GAGGGTGGCGAGGATGATTC+TGG | - | chr3.3:95516469-95516488 | MS.gene063116:CDS | 60.0% | |
GCCACATGCTTGATTGCCCG+TGG | - | chr3.3:95519507-95519526 | MS.gene063116:CDS | 60.0% | |
TAGGGGTGGAGACTACCAGG+CGG | - | chr3.3:95520253-95520272 | MS.gene063116:CDS | 60.0% | |
TTCTCCTTGGCGAGAACGGG+AGG | + | chr3.3:95516631-95516650 | None:intergenic | 60.0% | |
CCAGTCAGCTGCAGAGTCGG+AGG | + | chr3.3:95520406-95520425 | None:intergenic | 65.0% | |
CCTCCGACTCTGCAGCTGAC+TGG | - | chr3.3:95520403-95520422 | MS.gene063116:CDS | 65.0% | |
CGTGTCAGCGTTTCGGGCAC+CGG | - | chr3.3:95517358-95517377 | MS.gene063116:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 95516466 | 95520984 | 95516466 | ID=MS.gene063116 |
chr3.3 | mRNA | 95516466 | 95520984 | 95516466 | ID=MS.gene063116.t1;Parent=MS.gene063116 |
chr3.3 | exon | 95520763 | 95520984 | 95520763 | ID=MS.gene063116.t1.exon1;Parent=MS.gene063116.t1 |
chr3.3 | CDS | 95520763 | 95520984 | 95520763 | ID=cds.MS.gene063116.t1;Parent=MS.gene063116.t1 |
chr3.3 | exon | 95520562 | 95520678 | 95520562 | ID=MS.gene063116.t1.exon2;Parent=MS.gene063116.t1 |
chr3.3 | CDS | 95520562 | 95520678 | 95520562 | ID=cds.MS.gene063116.t1;Parent=MS.gene063116.t1 |
chr3.3 | exon | 95520243 | 95520476 | 95520243 | ID=MS.gene063116.t1.exon3;Parent=MS.gene063116.t1 |
chr3.3 | CDS | 95520243 | 95520476 | 95520243 | ID=cds.MS.gene063116.t1;Parent=MS.gene063116.t1 |
chr3.3 | exon | 95519446 | 95519752 | 95519446 | ID=MS.gene063116.t1.exon4;Parent=MS.gene063116.t1 |
chr3.3 | CDS | 95519446 | 95519752 | 95519446 | ID=cds.MS.gene063116.t1;Parent=MS.gene063116.t1 |
chr3.3 | exon | 95519074 | 95519330 | 95519074 | ID=MS.gene063116.t1.exon5;Parent=MS.gene063116.t1 |
chr3.3 | CDS | 95519074 | 95519330 | 95519074 | ID=cds.MS.gene063116.t1;Parent=MS.gene063116.t1 |
chr3.3 | exon | 95518408 | 95518680 | 95518408 | ID=MS.gene063116.t1.exon6;Parent=MS.gene063116.t1 |
chr3.3 | CDS | 95518408 | 95518680 | 95518408 | ID=cds.MS.gene063116.t1;Parent=MS.gene063116.t1 |
chr3.3 | exon | 95517908 | 95518189 | 95517908 | ID=MS.gene063116.t1.exon7;Parent=MS.gene063116.t1 |
chr3.3 | CDS | 95517908 | 95518189 | 95517908 | ID=cds.MS.gene063116.t1;Parent=MS.gene063116.t1 |
chr3.3 | exon | 95517633 | 95517753 | 95517633 | ID=MS.gene063116.t1.exon8;Parent=MS.gene063116.t1 |
chr3.3 | CDS | 95517633 | 95517753 | 95517633 | ID=cds.MS.gene063116.t1;Parent=MS.gene063116.t1 |
chr3.3 | exon | 95517025 | 95517194 | 95517025 | ID=MS.gene063116.t1.exon9;Parent=MS.gene063116.t1 |
chr3.3 | CDS | 95517025 | 95517194 | 95517025 | ID=cds.MS.gene063116.t1;Parent=MS.gene063116.t1 |
chr3.3 | exon | 95516466 | 95516564 | 95516466 | ID=MS.gene063116.t1.exon10;Parent=MS.gene063116.t1 |
chr3.3 | CDS | 95516466 | 95516564 | 95516466 | ID=cds.MS.gene063116.t1;Parent=MS.gene063116.t1 |
Gene Sequence |
Protein sequence |