Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32083.t1 | XP_003590707.2 | 95.5 | 1258 | 54 | 1 | 1 | 1255 | 1 | 1258 | 0.00E+00 | 2331.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32083.t1 | D1KF50 | 62.8 | 1014 | 346 | 9 | 253 | 1255 | 154 | 1147 | 0.0e+00 | 1206.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32083.t1 | G7I2M0 | 95.5 | 1258 | 54 | 1 | 1 | 1255 | 1 | 1258 | 0.0e+00 | 2331.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene008730 | MS.gene32083 | PPI |
| MS.gene32083 | MS.gene68170 | PPI |
| MS.gene32083 | MS.gene39588 | PPI |
| MS.gene003428 | MS.gene32083 | PPI |
| MS.gene32083 | MS.gene047400 | PPI |
| MS.gene79893 | MS.gene32083 | PPI |
| MS.gene32083 | MS.gene47513 | PPI |
| MS.gene32083 | MS.gene77531 | PPI |
| MS.gene32083 | MS.gene26565 | PPI |
| MS.gene32083 | MS.gene75670 | PPI |
| MS.gene32083 | MS.gene045358 | PPI |
| MS.gene32083 | MS.gene002540 | PPI |
| MS.gene004214 | MS.gene32083 | PPI |
| MS.gene27709 | MS.gene32083 | PPI |
| MS.gene058013 | MS.gene32083 | PPI |
| MS.gene063118 | MS.gene32083 | PPI |
| MS.gene32083 | MS.gene014230 | PPI |
| MS.gene32083 | MS.gene68766 | PPI |
| MS.gene32083 | MS.gene52223 | PPI |
| MS.gene32083 | MS.gene023855 | PPI |
| MS.gene32083 | MS.gene063116 | PPI |
| MS.gene01518 | MS.gene32083 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32083.t1 | MTR_1g072800 | 96.423 | 1258 | 42 | 1 | 1 | 1255 | 1 | 1258 | 0.0 | 2507 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32083.t1 | AT4G25120 | 62.846 | 1012 | 349 | 8 | 253 | 1255 | 154 | 1147 | 0.0 | 1272 |
Find 257 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCATTGCAAGAATGTTTA+AGG | 0.138597 | 1.2:-55587227 | None:intergenic |
| TAGCCCATTTATGGAATATA+TGG | 0.165449 | 1.2:-55602568 | None:intergenic |
| CCCTCTTACCTCAATGAATT+TGG | 0.168329 | 1.2:-55599605 | None:intergenic |
| CCTTATCCTTGAACTGTTTA+GGG | 0.171079 | 1.2:-55588311 | None:intergenic |
| TCATCATCTTCTAGAATTTC+AGG | 0.199433 | 1.2:+55601007 | MS.gene32083:CDS |
| CATAATAAAATAACAATTAT+TGG | 0.220639 | 1.2:+55589532 | MS.gene32083:CDS |
| TTTCCCATATATTCCATAAA+TGG | 0.222202 | 1.2:+55602564 | MS.gene32083:CDS |
| ATCTTTAGTGCAAAGATTTC+TGG | 0.234316 | 1.2:+55594458 | MS.gene32083:CDS |
| AATATCAATTTGTTCCAAAA+TGG | 0.235781 | 1.2:-55586346 | None:intergenic |
| TTCAATGGAGCTGACATTTC+CGG | 0.242122 | 1.2:+55589704 | MS.gene32083:CDS |
| TGATTGTTGAGCAAATTATT+TGG | 0.254965 | 1.2:-55602338 | None:intergenic |
| AAAATGCAAAACCAGCAAAA+TGG | 0.268707 | 1.2:+55585584 | None:intergenic |
| GTTCTTACTGATAACTCTTC+TGG | 0.270679 | 1.2:+55589987 | MS.gene32083:CDS |
| GCCTTATCCTTGAACTGTTT+AGG | 0.277204 | 1.2:-55588312 | None:intergenic |
| GCAACAATCTGAGGCTGATT+TGG | 0.283737 | 1.2:+55602307 | MS.gene32083:CDS |
| AGCTCCATTGAAACTGAAAA+TGG | 0.285422 | 1.2:-55589693 | None:intergenic |
| AGAGAGACCTCTTTGTAGTT+TGG | 0.306978 | 1.2:-55589752 | None:intergenic |
| AGATTTCTGGTACTTATAAA+AGG | 0.310724 | 1.2:+55594471 | MS.gene32083:CDS |
| ATTAATGTTTCTAAAGATAT+AGG | 0.315310 | 1.2:+55586303 | MS.gene32083:CDS |
| AATCCTCCGGATTCTTTCCT+TGG | 0.318685 | 1.2:-55586078 | None:intergenic |
| GGACCAGCTACAATCATTAA+AGG | 0.319770 | 1.2:-55586873 | None:intergenic |
| TGTCGTTGGAAATGTGGATA+TGG | 0.323447 | 1.2:+55586272 | MS.gene32083:CDS |
| CCATGCAATACAAGCTTCTA+AGG | 0.330736 | 1.2:+55589497 | MS.gene32083:CDS |
| TCAGAGAAAGTCAGGATTCA+TGG | 0.333949 | 1.2:+55589437 | MS.gene32083:CDS |
| CATTCTCAATCTTTAACTTC+AGG | 0.336578 | 1.2:-55606257 | None:intergenic |
| ACCTTATCTAGCAACCTCTT+TGG | 0.342277 | 1.2:-55602611 | None:intergenic |
| AAGAAAACCTTTCCACTTCC+CGG | 0.344425 | 1.2:-55586894 | None:intergenic |
| GCACCCAAGTTTCTTCAAAT+AGG | 0.347138 | 1.2:-55606937 | None:intergenic |
| TTGTACCGTTGATATGAGTT+TGG | 0.348775 | 1.2:+55586650 | MS.gene32083:CDS |
| CGTGAAATGGGCAATCAAAT+AGG | 0.354828 | 1.2:+55589113 | MS.gene32083:CDS |
| ACTCAGAGACATCATCTAAT+AGG | 0.355295 | 1.2:-55599573 | None:intergenic |
| ACATCTGAATTCTTAATATA+TGG | 0.357459 | 1.2:+55588174 | MS.gene32083:CDS |
| CTCATATAGTCGAGTCTTCA+AGG | 0.359262 | 1.2:+55594205 | MS.gene32083:CDS |
| ACCAAATTCATTGAGGTAAG+AGG | 0.360611 | 1.2:+55599604 | MS.gene32083:CDS |
| AGAAGTCCTTCCTGAGGCTT+TGG | 0.365169 | 1.2:-55589081 | None:intergenic |
| ATTAAAATCTTGTAATGCTC+TGG | 0.365675 | 1.2:+55589265 | MS.gene32083:CDS |
| ACTGGTGACATGCTTTGTTT+TGG | 0.369252 | 1.2:+55586702 | MS.gene32083:CDS |
| CGGGCAATTGTTGATGTTGA+TGG | 0.371200 | 1.2:+55597696 | MS.gene32083:CDS |
| ATGTCATGATGGACTCAAAT+TGG | 0.374073 | 1.2:+55600876 | MS.gene32083:CDS |
| ATGCGTGGAGGCGGGATGTA+GGG | 0.375669 | 1.2:-55606968 | None:intergenic |
| ATAATAATGTACCTCAACTA+TGG | 0.377602 | 1.2:-55600698 | None:intergenic |
| TTCTGCAGAATATCGTGAAA+TGG | 0.382371 | 1.2:+55589100 | MS.gene32083:CDS |
| ATTGCATGGCACTAGTATCT+TGG | 0.383850 | 1.2:-55589483 | None:intergenic |
| TTCCCATATATTCCATAAAT+GGG | 0.395687 | 1.2:+55602565 | MS.gene32083:CDS |
| TAGTAACGTTGACATGGGTT+TGG | 0.399138 | 1.2:+55586458 | MS.gene32083:CDS |
| ATCTCCTATTTGAAGAAACT+TGG | 0.400100 | 1.2:+55606933 | MS.gene32083:CDS |
| TTGCAGAGGTTCCGTTGAAC+AGG | 0.400611 | 1.2:+55585935 | MS.gene32083:CDS |
| GTCATTGCAAGAATGTTTAA+GGG | 0.400801 | 1.2:-55587226 | None:intergenic |
| CGCGGTGAAAGCAGCTGGGC+AGG | 0.401394 | 1.2:+55586578 | MS.gene32083:CDS |
| AGTAACGTTGACATGGGTTT+GGG | 0.403012 | 1.2:+55586459 | MS.gene32083:CDS |
| CACAAATTCTCCTTCGCTGC+AGG | 0.406168 | 1.2:-55586036 | None:intergenic |
| AAAGACCCCTAAACAGTTCA+AGG | 0.407264 | 1.2:+55588305 | MS.gene32083:CDS |
| TCGTCATTTCCTATATCCTT+AGG | 0.407997 | 1.2:-55586495 | None:intergenic |
| TTTAATGATTGTAGCTGGTC+CGG | 0.408518 | 1.2:+55586875 | MS.gene32083:CDS |
| GACCAGCTACAATCATTAAA+GGG | 0.409352 | 1.2:-55586872 | None:intergenic |
| TGCCGTTTGCTTCCCAGCTA+TGG | 0.414873 | 1.2:-55587293 | None:intergenic |
| TGTACCGTTGATATGAGTTT+GGG | 0.415331 | 1.2:+55586651 | MS.gene32083:CDS |
| AAACGTATTGGAGCCATAGC+TGG | 0.416341 | 1.2:+55587280 | MS.gene32083:CDS |
| AAATCCGCGGTGAAAGCAGC+TGG | 0.418520 | 1.2:+55586573 | MS.gene32083:CDS |
| ATAAACGTGCTCATCTTATG+AGG | 0.419539 | 1.2:+55605544 | MS.gene32083:CDS |
| AATTATTGGTGACGATGATC+AGG | 0.421373 | 1.2:+55589546 | MS.gene32083:CDS |
| GGACATTGTCTTCATAGTTA+AGG | 0.424282 | 1.2:+55599886 | MS.gene32083:CDS |
| TGCAAATTCTGCAAGCTCAC+TGG | 0.424638 | 1.2:-55602375 | None:intergenic |
| TCCTATCCCGAAAAGCCATT+TGG | 0.425119 | 1.2:-55590361 | None:intergenic |
| CATTGAGGTAAGAGGGGAAA+AGG | 0.429872 | 1.2:+55599612 | MS.gene32083:CDS |
| ACCCCTTTAATGATTGTAGC+TGG | 0.429977 | 1.2:+55586870 | MS.gene32083:CDS |
| TGCTTCATCACAGCTTAAGC+TGG | 0.430695 | 1.2:-55605367 | None:intergenic |
| AGTGAAAACATCCGGGGTGG+AGG | 0.432885 | 1.2:+55586206 | MS.gene32083:CDS |
| AAGGAAATGTCAGAAGATAA+AGG | 0.433329 | 1.2:+55599631 | MS.gene32083:CDS |
| AGCCCATTTATGGAATATAT+GGG | 0.435807 | 1.2:-55602567 | None:intergenic |
| CAACAAATCAGTGGTACAAC+AGG | 0.439604 | 1.2:-55602276 | None:intergenic |
| TCGTTAAAACCTTCCTTCCA+TGG | 0.439801 | 1.2:-55595970 | None:intergenic |
| ATTGTAGCTGGTCCGGGAAG+TGG | 0.442729 | 1.2:+55586882 | MS.gene32083:CDS |
| CCCTAAACAGTTCAAGGATA+AGG | 0.444144 | 1.2:+55588311 | MS.gene32083:CDS |
| AAGGGTTTATGCGACGTTGA+TGG | 0.446582 | 1.2:+55585874 | MS.gene32083:CDS |
| AAATGCAAAACCAGCAAAAT+GGG | 0.449284 | 1.2:+55585585 | None:intergenic |
| GAAATACCTTCTTGAGCAAC+GGG | 0.450690 | 1.2:+55597677 | MS.gene32083:intron |
| CCATTTCAGGCCAAAGCCTC+AGG | 0.460475 | 1.2:+55589071 | MS.gene32083:intron |
| TTGAGCAAATTATTTGGCAC+AGG | 0.462449 | 1.2:-55602332 | None:intergenic |
| TCCGCGGATTTGTGCTCAAA+GGG | 0.464975 | 1.2:-55586369 | None:intergenic |
| TTAAAGATTGAGAATGCAAT+GGG | 0.465257 | 1.2:+55606264 | MS.gene32083:CDS |
| GATGCGTGGAGGCGGGATGT+AGG | 0.469088 | 1.2:-55606969 | None:intergenic |
| AAATCCGCAGTGAAAACATC+CGG | 0.469826 | 1.2:+55586198 | MS.gene32083:CDS |
| CCTTTGAAATCGTGTAATAG+AGG | 0.470147 | 1.2:-55600655 | None:intergenic |
| TGGTGAAGAGATGGATGAAT+CGG | 0.470569 | 1.2:-55585663 | None:intergenic |
| TTGAACAGGCTACATTCATC+GGG | 0.470832 | 1.2:+55585949 | MS.gene32083:CDS |
| TTCACTGTAGTTTAAGTGAA+AGG | 0.471456 | 1.2:+55586001 | MS.gene32083:CDS |
| GTTTGTTCTTCTTCTGCCTT+AGG | 0.472771 | 1.2:-55604202 | None:intergenic |
| TCATTTGTCCTGTAGGCAAA+AGG | 0.475606 | 1.2:+55599854 | MS.gene32083:intron |
| AGTGCTGTTTCTGAGGGTAT+AGG | 0.477579 | 1.2:+55586678 | MS.gene32083:CDS |
| TTGAGGAAGGAGTGACTTTG+AGG | 0.481878 | 1.2:-55585630 | None:intergenic |
| CATGATGGACTCAAATTGGC+AGG | 0.482295 | 1.2:+55600880 | MS.gene32083:CDS |
| GTGAAAACATCCGGGGTGGA+GGG | 0.483961 | 1.2:+55586207 | MS.gene32083:CDS |
| GAAACTCCAAGGAAAGAATC+CGG | 0.483978 | 1.2:+55586072 | MS.gene32083:CDS |
| ATTACGAAAGGAAATAAATC+CGG | 0.484333 | 1.2:-55589723 | None:intergenic |
| TTAATGATTGTAGCTGGTCC+GGG | 0.484823 | 1.2:+55586876 | MS.gene32083:CDS |
| CTCCGCGGATTTGTGCTCAA+AGG | 0.484893 | 1.2:-55586370 | None:intergenic |
| GATTGAGAATGCAATGGGTT+CGG | 0.485397 | 1.2:+55606269 | MS.gene32083:CDS |
| TCTGCAGAATATCGTGAAAT+GGG | 0.486314 | 1.2:+55589101 | MS.gene32083:CDS |
| CGTTAAAACCTTCCTTCCAT+GGG | 0.486757 | 1.2:-55595969 | None:intergenic |
| GAGGCGGGATGTAGGGGTCA+TGG | 0.489449 | 1.2:-55606961 | None:intergenic |
| GGGAACCAGTGCTGTTTCTG+AGG | 0.489910 | 1.2:+55586671 | MS.gene32083:CDS |
| TCAGCAGATAACTGTTCCTA+TGG | 0.489914 | 1.2:+55590193 | MS.gene32083:CDS |
| AGATGAGCACGTTTATCAGC+AGG | 0.489996 | 1.2:-55605537 | None:intergenic |
| CCAAATTCATTGAGGTAAGA+GGG | 0.490121 | 1.2:+55599605 | MS.gene32083:CDS |
| GTTGAACAGGCTACATTCAT+CGG | 0.491263 | 1.2:+55585948 | MS.gene32083:CDS |
| TGATTCAGATTCAAATCCTC+CGG | 0.494256 | 1.2:-55586091 | None:intergenic |
| ATTCTTCAACTGACATCGCT+TGG | 0.495343 | 1.2:-55589964 | None:intergenic |
| CAACCTCTTTGGATCTTGAA+AGG | 0.496114 | 1.2:-55602600 | None:intergenic |
| TCCAAAGAGGTTGCTAGATA+AGG | 0.497008 | 1.2:+55602610 | MS.gene32083:CDS |
| GGCGTTAGATCATAGCTGTC+AGG | 0.498430 | 1.2:+55586599 | MS.gene32083:CDS |
| AAAATACCGTTTAACATTCA+CGG | 0.498668 | 1.2:+55590383 | MS.gene32083:CDS |
| TCTGCAAGAGGAACTCTCTT+CGG | 0.500691 | 1.2:-55585919 | None:intergenic |
| GGAACCAGTGCTGTTTCTGA+GGG | 0.501826 | 1.2:+55586672 | MS.gene32083:CDS |
| ACTAACTACACCGCTCTCGC+TGG | 0.503544 | 1.2:-55586439 | None:intergenic |
| TCAAGGATAAGGCAAAGAAA+TGG | 0.503978 | 1.2:+55588322 | MS.gene32083:CDS |
| GACACTGACTACCATTCATC+AGG | 0.504509 | 1.2:+55599747 | MS.gene32083:CDS |
| ACGTTGATGGTGCCAAGGGT+AGG | 0.504831 | 1.2:+55585887 | MS.gene32083:CDS |
| TCGAGCGAGGGCAGTGTCGT+TGG | 0.505389 | 1.2:+55586258 | MS.gene32083:CDS |
| GGGGATAGGTCATAGTTGTC+AGG | 0.505448 | 1.2:+55586227 | MS.gene32083:CDS |
| GGAAATGTGGATATGGGATC+GGG | 0.505632 | 1.2:+55586279 | MS.gene32083:CDS |
| TAAGACGAGATGCGTGGAGG+CGG | 0.505673 | 1.2:-55606977 | None:intergenic |
| ACATCCGGGGTGGAGGGGAT+AGG | 0.506031 | 1.2:+55586213 | MS.gene32083:CDS |
| TGAAAACATCCGGGGTGGAG+GGG | 0.507918 | 1.2:+55586208 | MS.gene32083:CDS |
| ACGGCAATGATTTCATAAGA+AGG | 0.508310 | 1.2:+55602408 | MS.gene32083:CDS |
| ACCAGACATCCACAATGGTT+GGG | 0.508385 | 1.2:+55587002 | MS.gene32083:intron |
| CGCGGAGAAAGAAGCTGGGG+TGG | 0.509393 | 1.2:+55586386 | MS.gene32083:CDS |
| AAGACGAGATGCGTGGAGGC+GGG | 0.509628 | 1.2:-55606976 | None:intergenic |
| GCCACGCCGTGAATGTTAAA+CGG | 0.512239 | 1.2:-55590389 | None:intergenic |
| AAGTATTTAGAATATTCCTC+TGG | 0.513130 | 1.2:-55586798 | None:intergenic |
| GCGGAGAAAGAAGCTGGGGT+GGG | 0.515788 | 1.2:+55586387 | MS.gene32083:CDS |
| ATGTGGATAGCGAGACTACT+AGG | 0.515917 | 1.2:+55586751 | MS.gene32083:CDS |
| AAATCCGCGGAGAAAGAAGC+TGG | 0.516342 | 1.2:+55586381 | MS.gene32083:CDS |
| TCATATCAAAACTTGTTCAC+AGG | 0.521101 | 1.2:+55596002 | MS.gene32083:CDS |
| GTTTCTGAGGGTATAGGAAC+TGG | 0.523455 | 1.2:+55586684 | MS.gene32083:CDS |
| GTTAAAGATTGAGAATGCAA+TGG | 0.526126 | 1.2:+55606263 | MS.gene32083:CDS |
| TAACCTGCAGATAATTATGA+AGG | 0.528096 | 1.2:+55590102 | MS.gene32083:intron |
| TGGAAATGTGGATATGGGAT+CGG | 0.528301 | 1.2:+55586278 | MS.gene32083:CDS |
| ATGCTTCAAACAGCACTGCC+TGG | 0.528925 | 1.2:+55594170 | MS.gene32083:CDS |
| CGTTGATGGTGCCAAGGGTA+GGG | 0.529273 | 1.2:+55585888 | MS.gene32083:CDS |
| AAAGCGAGAAGGCCATCAAA+AGG | 0.530917 | 1.2:+55602247 | MS.gene32083:CDS |
| ATTCTTACCTGCTTGTCAGT+TGG | 0.530991 | 1.2:-55606297 | None:intergenic |
| GGGGATAGATCATAGCTGTC+AGG | 0.532802 | 1.2:+55586407 | MS.gene32083:CDS |
| TGCGTGGAGGCGGGATGTAG+GGG | 0.533503 | 1.2:-55606967 | None:intergenic |
| GCTGAAATGAGAAAACGTAT+TGG | 0.534321 | 1.2:+55587268 | MS.gene32083:CDS |
| TGCAATTCTCTACCGTAGGC+GGG | 0.534781 | 1.2:+55590222 | MS.gene32083:CDS |
| TTGTAATTGATGAACGCCTA+AGG | 0.536712 | 1.2:+55604186 | MS.gene32083:CDS |
| TACCAGACATCCACAATGGT+TGG | 0.537238 | 1.2:+55587001 | MS.gene32083:intron |
| CGGGATAGTTACCTGATGAA+TGG | 0.538107 | 1.2:-55599758 | None:intergenic |
| CGGAGAAAGAAGCTGGGGTG+GGG | 0.539549 | 1.2:+55586388 | MS.gene32083:CDS |
| GGCAACACCAACTGACAAGC+AGG | 0.544593 | 1.2:+55606290 | MS.gene32083:CDS |
| CCTTAGAAGCTTGTATTGCA+TGG | 0.544871 | 1.2:-55589497 | None:intergenic |
| CGATCTTACCCATGGAAGGA+AGG | 0.545407 | 1.2:+55595961 | MS.gene32083:CDS |
| TGAAATTCTAGAAGATGATG+AGG | 0.547891 | 1.2:-55601005 | None:intergenic |
| CTTATCCTTGAACTGTTTAG+GGG | 0.548754 | 1.2:-55588310 | None:intergenic |
| AGAAATACCTTCTTGAGCAA+CGG | 0.549166 | 1.2:+55597676 | MS.gene32083:intron |
| GGAAAGAGAAGTTACTGGTA+TGG | 0.549677 | 1.2:-55585683 | None:intergenic |
| TCTCCTATTTGAAGAAACTT+GGG | 0.551625 | 1.2:+55606934 | MS.gene32083:CDS |
| TTTAGAATATTCCTCTGGCA+TGG | 0.553981 | 1.2:-55586793 | None:intergenic |
| AGGCTACATTCATCGGGGAA+TGG | 0.556340 | 1.2:+55585955 | MS.gene32083:CDS |
| AGTGGCTGTTCCTGCAGCGA+AGG | 0.556361 | 1.2:+55586026 | MS.gene32083:CDS |
| AACGTATTGGAGCCATAGCT+GGG | 0.558250 | 1.2:+55587281 | MS.gene32083:CDS |
| CAATTGCCCGTTGCTCAAGA+AGG | 0.559238 | 1.2:-55597683 | None:intergenic |
| GGCGTTACTTCCTTTCGAGA+AGG | 0.559259 | 1.2:+55594226 | MS.gene32083:CDS |
| AAGCCTTTCAAGATCCAAAG+AGG | 0.559938 | 1.2:+55602597 | MS.gene32083:CDS |
| ATCAGGGAAAGCCTTCCAAA+TGG | 0.561106 | 1.2:+55590346 | MS.gene32083:CDS |
| TTTAGGGGTCTTTAGACCAT+CGG | 0.561700 | 1.2:-55588295 | None:intergenic |
| TGTAGTTAGTAACGTTGACA+TGG | 0.563921 | 1.2:+55586452 | MS.gene32083:CDS |
| GGGCAGTGTCGTTGGAAATG+TGG | 0.564061 | 1.2:+55586266 | MS.gene32083:CDS |
| ATGCGACGTTGATGGTGCCA+AGG | 0.564526 | 1.2:+55585882 | MS.gene32083:CDS |
| AGCTGGTCCGGGAAGTGGAA+AGG | 0.565779 | 1.2:+55586887 | MS.gene32083:CDS |
| ACTTGAAATCACTAAATGAA+AGG | 0.565834 | 1.2:+55586817 | MS.gene32083:CDS |
| CAGGAGAGAGTCTCGAGCGA+GGG | 0.566241 | 1.2:+55586246 | MS.gene32083:CDS |
| CACCCCAGCTTCTTTCTCCG+CGG | 0.567019 | 1.2:-55586385 | None:intergenic |
| TTACTGGTATGGTGAAGAGA+TGG | 0.569422 | 1.2:-55585672 | None:intergenic |
| GAGAGAGTTTCCAGCGAGAG+CGG | 0.571871 | 1.2:+55586429 | MS.gene32083:CDS |
| AATCCGCAGTGAAAACATCC+GGG | 0.572134 | 1.2:+55586199 | MS.gene32083:CDS |
| CCTCTATTACACGATTTCAA+AGG | 0.573941 | 1.2:+55600655 | MS.gene32083:CDS |
| AGCCATAGCTGGGAAGCAAA+CGG | 0.574908 | 1.2:+55587291 | MS.gene32083:CDS |
| TTGCAATTCTCTACCGTAGG+CGG | 0.575068 | 1.2:+55590221 | MS.gene32083:CDS |
| GTTTGGAAAATCATTACGAA+AGG | 0.576451 | 1.2:-55589735 | None:intergenic |
| GAGAATTGCAATGTTGCCAT+AGG | 0.576740 | 1.2:-55590209 | None:intergenic |
| TGATAACTCTTCTGGATCCA+AGG | 0.579242 | 1.2:+55589995 | MS.gene32083:CDS |
| CGGAACTCGAACCCTACCCT+TGG | 0.582753 | 1.2:-55585899 | None:intergenic |
| ATGTTGCAATGACTCGTGCT+CGG | 0.583624 | 1.2:+55600834 | MS.gene32083:CDS |
| TGCGACGTTGATGGTGCCAA+GGG | 0.587453 | 1.2:+55585883 | MS.gene32083:CDS |
| CATATCAAAACTTGTTCACA+GGG | 0.588123 | 1.2:+55596003 | MS.gene32083:CDS |
| TCCTCTGGCATGGTTCCACT+CGG | 0.589774 | 1.2:-55586783 | None:intergenic |
| GTCGTTGGAAATGTGGATAT+GGG | 0.589941 | 1.2:+55586273 | MS.gene32083:CDS |
| GATGAGCACGTTTATCAGCA+GGG | 0.593743 | 1.2:-55605536 | None:intergenic |
| TTTGTCTACCAAATTCATTG+AGG | 0.593811 | 1.2:+55599597 | MS.gene32083:CDS |
| GAAGAGAGTTCCTCTTGCAG+AGG | 0.596350 | 1.2:+55585921 | MS.gene32083:CDS |
| CAAAACTCGCCCAACCATTG+TGG | 0.596725 | 1.2:-55587011 | None:intergenic |
| ACAGCGGAATGCAATTATTG+AGG | 0.596962 | 1.2:+55588206 | MS.gene32083:CDS |
| GATGAATGTAGCCTGTTCAA+CGG | 0.598121 | 1.2:-55585946 | None:intergenic |
| ATCCCGAAAAGCCATTTGGA+AGG | 0.598953 | 1.2:-55590357 | None:intergenic |
| GAAGAGATGGATGAATCGGA+AGG | 0.600187 | 1.2:-55585659 | None:intergenic |
| CGATTTCAAAGGTGTTGTGA+AGG | 0.602419 | 1.2:+55600666 | MS.gene32083:CDS |
| TGTAGGCAAAAGGTTTAGAG+TGG | 0.605902 | 1.2:+55599864 | MS.gene32083:intron |
| TTCAACGGAACCTCTGCAAG+AGG | 0.607424 | 1.2:-55585931 | None:intergenic |
| GAGAATGTTTCAAGCGAGAG+CGG | 0.608079 | 1.2:+55586621 | MS.gene32083:CDS |
| TTGATTGGAGAAGCGTCCGA+TGG | 0.609042 | 1.2:+55588279 | MS.gene32083:CDS |
| CATTAAAGGGGTAGAAACAT+CGG | 0.609117 | 1.2:-55586859 | None:intergenic |
| CGCAGTGAAAACATCCGGGG+TGG | 0.611066 | 1.2:+55586203 | MS.gene32083:CDS |
| CTTTGAAATCGTGTAATAGA+GGG | 0.611912 | 1.2:-55600654 | None:intergenic |
| TCCCTTTGAGCACAAATCCG+CGG | 0.612481 | 1.2:+55586368 | MS.gene32083:CDS |
| TGAGCAAATTATTTGGCACA+GGG | 0.615285 | 1.2:-55602331 | None:intergenic |
| TCAGGAGAGAGTCTCGAGCG+AGG | 0.615530 | 1.2:+55586245 | MS.gene32083:CDS |
| TAAACGTGCTCATCTTATGA+GGG | 0.616051 | 1.2:+55605545 | MS.gene32083:CDS |
| AATCCGCGGAGAAAGAAGCT+GGG | 0.618912 | 1.2:+55586382 | MS.gene32083:CDS |
| CAAATTCATTGAGGTAAGAG+GGG | 0.620448 | 1.2:+55599606 | MS.gene32083:CDS |
| AATCCGCGGTGAAAGCAGCT+GGG | 0.620694 | 1.2:+55586574 | MS.gene32083:CDS |
| GGAGCGATCTTACCCATGGA+AGG | 0.621578 | 1.2:+55595957 | MS.gene32083:intron |
| AATTCTTAATATATGGTCAG+TGG | 0.622709 | 1.2:+55588181 | MS.gene32083:CDS |
| TATGAGTCATCGTCACAACC+AGG | 0.624960 | 1.2:-55594188 | None:intergenic |
| GTAGTTAGTAACGTTGACAT+GGG | 0.625581 | 1.2:+55586453 | MS.gene32083:CDS |
| TTCAGGCCAAAGCCTCAGGA+AGG | 0.625867 | 1.2:+55589075 | MS.gene32083:intron |
| GAACTACAAATAAAGCGAGA+AGG | 0.625987 | 1.2:+55602236 | MS.gene32083:CDS |
| CATAGGAGCGATCTTACCCA+TGG | 0.630306 | 1.2:+55595953 | MS.gene32083:intron |
| CAATTGTTGATGTTGATGGA+GGG | 0.630795 | 1.2:+55597700 | MS.gene32083:CDS |
| TTCTGCAGAAGTCCTTCCTG+AGG | 0.631532 | 1.2:-55589087 | None:intergenic |
| GCAATTGTTGATGTTGATGG+AGG | 0.638860 | 1.2:+55597699 | MS.gene32083:CDS |
| GAAATTCTAGAAGATGATGA+GGG | 0.640072 | 1.2:-55601004 | None:intergenic |
| ACCGTTTAACATTCACGGCG+TGG | 0.640575 | 1.2:+55590388 | MS.gene32083:CDS |
| TATACCCTCAGAAACAGCAC+TGG | 0.644074 | 1.2:-55586676 | None:intergenic |
| CAAGAAACATCACCCGCCTA+CGG | 0.646039 | 1.2:-55590234 | None:intergenic |
| GGACACTGCAGCCATAGTTG+AGG | 0.646812 | 1.2:+55600687 | MS.gene32083:CDS |
| ATTTCTTTCAGAAATCGTGA+AGG | 0.648622 | 1.2:-55600981 | None:intergenic |
| TATATGGTCAGTGGCAACAG+CGG | 0.650024 | 1.2:+55588190 | MS.gene32083:CDS |
| AAGAGATGGATGAATCGGAA+GGG | 0.652168 | 1.2:-55585658 | None:intergenic |
| ACCAGCTACAATCATTAAAG+GGG | 0.653481 | 1.2:-55586871 | None:intergenic |
| ATGACCTATCCCCTCCACCC+CGG | 0.654841 | 1.2:-55586217 | None:intergenic |
| GGATCATAAAGAAGAACATG+TGG | 0.655055 | 1.2:+55586734 | MS.gene32083:CDS |
| CTACATTCATCGGGGAATGG+CGG | 0.655332 | 1.2:+55585958 | MS.gene32083:CDS |
| CTCCACACGTTACATTGTCG+AGG | 0.655441 | 1.2:+55589914 | MS.gene32083:CDS |
| GAATTTGCAGAGGCAAACAA+CGG | 0.656034 | 1.2:+55602389 | MS.gene32083:CDS |
| TGAGCTTGCAGAATTTGCAG+AGG | 0.660838 | 1.2:+55602379 | MS.gene32083:CDS |
| GTAGGCAAAAGGTTTAGAGT+GGG | 0.663253 | 1.2:+55599865 | MS.gene32083:intron |
| TGTAGCGAACATGATACCTG+AGG | 0.664760 | 1.2:+55597285 | MS.gene32083:CDS |
| ACATTGCAATTCTCTACCGT+AGG | 0.665868 | 1.2:+55590218 | MS.gene32083:CDS |
| GGTTCCCAAACTCATATCAA+CGG | 0.666164 | 1.2:-55586655 | None:intergenic |
| TATGAAGGAGTGTCACAATG+AGG | 0.672349 | 1.2:+55590117 | MS.gene32083:CDS |
| CTGCCCAGCTGCTTTCACCG+CGG | 0.677468 | 1.2:-55586577 | None:intergenic |
| ACAAATTGATATTATGTGTG+AGG | 0.677973 | 1.2:+55586173 | MS.gene32083:CDS |
| GCTCAATAAGACGAGATGCG+TGG | 0.679541 | 1.2:-55606983 | None:intergenic |
| ATCCGCGGAGAAAGAAGCTG+GGG | 0.679676 | 1.2:+55586383 | MS.gene32083:CDS |
| ATGATACCAGACATCCACAA+TGG | 0.689594 | 1.2:+55586997 | MS.gene32083:intron |
| CAATAAGACGAGATGCGTGG+AGG | 0.691429 | 1.2:-55606980 | None:intergenic |
| AGCCTCGACAATGTAACGTG+TGG | 0.694105 | 1.2:-55589916 | None:intergenic |
| ACCGAGTGGAACCATGCCAG+AGG | 0.699060 | 1.2:+55586782 | MS.gene32083:CDS |
| ATCCGCAGTGAAAACATCCG+GGG | 0.704488 | 1.2:+55586200 | MS.gene32083:CDS |
| TAGTTTAAGTGAAAGGACAG+TGG | 0.713526 | 1.2:+55586008 | MS.gene32083:CDS |
| ACTAGGAAAAGTTTACCGAG+TGG | 0.721933 | 1.2:+55586768 | MS.gene32083:CDS |
| ACTCCAAGGAAAGAATCCGG+AGG | 0.725399 | 1.2:+55586075 | MS.gene32083:CDS |
| GCAGAAGAAGAACAAACACA+AGG | 0.726656 | 1.2:+55604208 | MS.gene32083:CDS |
| TGAACAGGCTACATTCATCG+GGG | 0.761674 | 1.2:+55585950 | MS.gene32083:CDS |
| TCTTTGTGAGCAGAAATCCG+CGG | 0.776290 | 1.2:+55586560 | MS.gene32083:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 55585587 | 55607022 | 55585587 | ID=MS.gene32083 |
| chr1.2 | mRNA | 55585587 | 55607022 | 55585587 | ID=MS.gene32083.t1;Parent=MS.gene32083 |
| chr1.2 | exon | 55585587 | 55585690 | 55585587 | ID=MS.gene32083.t1.exon1;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55585587 | 55585690 | 55585587 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55585870 | 55586908 | 55585870 | ID=MS.gene32083.t1.exon2;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55585870 | 55586908 | 55585870 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55587007 | 55587048 | 55587007 | ID=MS.gene32083.t1.exon3;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55587007 | 55587048 | 55587007 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55587217 | 55587380 | 55587217 | ID=MS.gene32083.t1.exon4;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55587217 | 55587380 | 55587217 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55588164 | 55588362 | 55588164 | ID=MS.gene32083.t1.exon5;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55588164 | 55588362 | 55588164 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55589080 | 55589136 | 55589080 | ID=MS.gene32083.t1.exon6;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55589080 | 55589136 | 55589080 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55589236 | 55589341 | 55589236 | ID=MS.gene32083.t1.exon7;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55589236 | 55589341 | 55589236 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55589434 | 55589567 | 55589434 | ID=MS.gene32083.t1.exon8;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55589434 | 55589567 | 55589434 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55589692 | 55589766 | 55589692 | ID=MS.gene32083.t1.exon9;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55589692 | 55589766 | 55589692 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55589891 | 55590016 | 55589891 | ID=MS.gene32083.t1.exon10;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55589891 | 55590016 | 55589891 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55590112 | 55590243 | 55590112 | ID=MS.gene32083.t1.exon11;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55590112 | 55590243 | 55590112 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55590344 | 55590427 | 55590344 | ID=MS.gene32083.t1.exon12;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55590344 | 55590427 | 55590344 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55594149 | 55594262 | 55594149 | ID=MS.gene32083.t1.exon13;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55594149 | 55594262 | 55594149 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55594392 | 55594492 | 55594392 | ID=MS.gene32083.t1.exon14;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55594392 | 55594492 | 55594392 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55595958 | 55596024 | 55595958 | ID=MS.gene32083.t1.exon15;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55595958 | 55596024 | 55595958 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55597256 | 55597306 | 55597256 | ID=MS.gene32083.t1.exon16;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55597256 | 55597306 | 55597256 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55597678 | 55597755 | 55597678 | ID=MS.gene32083.t1.exon17;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55597678 | 55597755 | 55597678 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55599562 | 55599768 | 55599562 | ID=MS.gene32083.t1.exon18;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55599562 | 55599768 | 55599562 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55599869 | 55599907 | 55599869 | ID=MS.gene32083.t1.exon19;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55599869 | 55599907 | 55599869 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55600637 | 55600708 | 55600637 | ID=MS.gene32083.t1.exon20;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55600637 | 55600708 | 55600637 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55600815 | 55600901 | 55600815 | ID=MS.gene32083.t1.exon21;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55600815 | 55600901 | 55600815 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55600972 | 55601028 | 55600972 | ID=MS.gene32083.t1.exon22;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55600972 | 55601028 | 55600972 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55602218 | 55602429 | 55602218 | ID=MS.gene32083.t1.exon23;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55602218 | 55602429 | 55602218 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55602538 | 55602631 | 55602538 | ID=MS.gene32083.t1.exon24;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55602538 | 55602631 | 55602538 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55604179 | 55604229 | 55604179 | ID=MS.gene32083.t1.exon25;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55604179 | 55604229 | 55604179 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55605345 | 55605407 | 55605345 | ID=MS.gene32083.t1.exon26;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55605345 | 55605407 | 55605345 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55605516 | 55605575 | 55605516 | ID=MS.gene32083.t1.exon27;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55605516 | 55605575 | 55605516 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55606249 | 55606311 | 55606249 | ID=MS.gene32083.t1.exon28;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55606249 | 55606311 | 55606249 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| chr1.2 | exon | 55606933 | 55607022 | 55606933 | ID=MS.gene32083.t1.exon29;Parent=MS.gene32083.t1 |
| chr1.2 | CDS | 55606933 | 55607022 | 55606933 | ID=cds.MS.gene32083.t1;Parent=MS.gene32083.t1 |
| Gene Sequence |
| Protein sequence |