Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40016.t1 | XP_003590707.2 | 94.4 | 1258 | 59 | 1 | 1 | 1247 | 1 | 1258 | 0.00E+00 | 2310 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40016.t1 | D1KF50 | 63.0 | 1009 | 341 | 9 | 256 | 1247 | 154 | 1147 | 0.0e+00 | 1206.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40016.t1 | G7I2M0 | 94.4 | 1258 | 59 | 1 | 1 | 1247 | 1 | 1258 | 0.0e+00 | 2310.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40016 | MS.gene47513 | PPI |
| MS.gene40016 | MS.gene68170 | PPI |
| MS.gene40016 | MS.gene39588 | PPI |
| MS.gene40016 | MS.gene26565 | PPI |
| MS.gene27709 | MS.gene40016 | PPI |
| MS.gene058013 | MS.gene40016 | PPI |
| MS.gene063118 | MS.gene40016 | PPI |
| MS.gene40016 | MS.gene77531 | PPI |
| MS.gene003428 | MS.gene40016 | PPI |
| MS.gene40016 | MS.gene75670 | PPI |
| MS.gene40016 | MS.gene045358 | PPI |
| MS.gene40016 | MS.gene014230 | PPI |
| MS.gene79893 | MS.gene40016 | PPI |
| MS.gene40016 | MS.gene002540 | PPI |
| MS.gene01518 | MS.gene40016 | PPI |
| MS.gene008730 | MS.gene40016 | PPI |
| MS.gene40016 | MS.gene063116 | PPI |
| MS.gene40016 | MS.gene68766 | PPI |
| MS.gene40016 | MS.gene52223 | PPI |
| MS.gene40016 | MS.gene023855 | PPI |
| MS.gene40016 | MS.gene047400 | PPI |
| MS.gene004214 | MS.gene40016 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40016.t1 | MTR_1g072800 | 95.390 | 1258 | 47 | 1 | 1 | 1247 | 1 | 1258 | 0.0 | 2425 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40016.t1 | AT4G25120 | 63.033 | 1009 | 341 | 9 | 256 | 1247 | 154 | 1147 | 0.0 | 1271 |
Find 258 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCATTGCAAGAATGTTTA+AGG | 0.138597 | 1.4:-59588677 | None:intergenic |
| AAAGACCCCTAAACAGTTTA+AGG | 0.152873 | 1.4:+59589755 | MS.gene40016:CDS |
| TAGCCCATTTATGGAATATA+TGG | 0.165449 | 1.4:-59603875 | None:intergenic |
| CCCTCTTACCTCAATGAATT+TGG | 0.168329 | 1.4:-59600939 | None:intergenic |
| CCTTATCCTTAAACTGTTTA+GGG | 0.180200 | 1.4:-59589761 | None:intergenic |
| TCATCATCTTCTAGAATTTC+AGG | 0.199433 | 1.4:+59602342 | MS.gene40016:CDS |
| CATAATAAAATAACAATTAT+TGG | 0.220639 | 1.4:+59590981 | MS.gene40016:CDS |
| TTTCCCATATATTCCATAAA+TGG | 0.222202 | 1.4:+59603871 | MS.gene40016:CDS |
| AAAATGCAAAACCAGGAAAA+TGG | 0.229412 | 1.4:+59587031 | None:intergenic |
| ATCTTTAGTGCAAAGATTTC+TGG | 0.234316 | 1.4:+59595629 | MS.gene40016:CDS |
| TTCAATGGAGCTGACATTTC+CGG | 0.242122 | 1.4:+59591153 | MS.gene40016:CDS |
| TGATTGTTGAGCAAATTATT+TGG | 0.254965 | 1.4:-59603645 | None:intergenic |
| GCCTTATCCTTAAACTGTTT+AGG | 0.258927 | 1.4:-59589762 | None:intergenic |
| GTTCTTACTGATAACTCTTC+TGG | 0.270679 | 1.4:+59591436 | MS.gene40016:CDS |
| AGCTCCATTGAAACTGAAAA+TGG | 0.285422 | 1.4:-59591142 | None:intergenic |
| AATCCTCCATGTTCTTTCCT+TGG | 0.299083 | 1.4:-59587526 | None:intergenic |
| AGAGAGACCTCTTTGTAGTT+TGG | 0.306978 | 1.4:-59591201 | None:intergenic |
| AGATTTCTGGTACTTATAAA+AGG | 0.310724 | 1.4:+59595642 | MS.gene40016:CDS |
| AATATCAATTGGTTCCAAAA+TGG | 0.310838 | 1.4:-59587794 | None:intergenic |
| ATTAATGTTTCTAAAGATAT+AGG | 0.315310 | 1.4:+59587751 | MS.gene40016:CDS |
| GTTTGTTCTTCTTCTGTCTT+AGG | 0.318206 | 1.4:-59605511 | None:intergenic |
| GGACCAGCTACAATCATTAA+AGG | 0.319770 | 1.4:-59588321 | None:intergenic |
| TGTCGTTGGAAATGTGGATA+TGG | 0.323447 | 1.4:+59587720 | MS.gene40016:CDS |
| TACCTGTTGTACCACTGATT+TGG | 0.326941 | 1.4:+59603614 | MS.gene40016:CDS |
| CCATGCAATACAAGCTTCTA+AGG | 0.330736 | 1.4:+59590946 | MS.gene40016:CDS |
| TCAGAGAAAGTCAGGATTCA+TGG | 0.333949 | 1.4:+59590886 | MS.gene40016:CDS |
| AGAAGTTCTTCCTGAGGCTT+TGG | 0.336152 | 1.4:-59590531 | None:intergenic |
| CATTCTCAATCTTTAACTTC+AGG | 0.336578 | 1.4:-59607534 | None:intergenic |
| ACCTTATCTAGCAACCTCTT+TGG | 0.342277 | 1.4:-59603918 | None:intergenic |
| AAGAAAACCTTTCCACTTCC+CGG | 0.344425 | 1.4:-59588342 | None:intergenic |
| GCACCCAAGTTTCTTCAAAT+AGG | 0.347138 | 1.4:-59608261 | None:intergenic |
| TTGTACCGTTGATATGAGTT+TGG | 0.348775 | 1.4:+59588098 | MS.gene40016:CDS |
| CGTGAAATGGGCAATCAAAT+AGG | 0.354828 | 1.4:+59590563 | MS.gene40016:CDS |
| ACTCAGAGACATCATCTAAT+AGG | 0.355295 | 1.4:-59600907 | None:intergenic |
| TTGTGTAGGGTGATATAAAT+AGG | 0.357107 | 1.4:+59603550 | MS.gene40016:intron |
| ACATCTGAATTCTTAATATA+TGG | 0.357459 | 1.4:+59589624 | MS.gene40016:CDS |
| ACCAAATTCATTGAGGTAAG+AGG | 0.360611 | 1.4:+59600938 | MS.gene40016:CDS |
| ATTAAAATCTTGTAATGCTC+TGG | 0.365675 | 1.4:+59590715 | MS.gene40016:CDS |
| ACTGGTGACATGCTTTGTTT+TGG | 0.369252 | 1.4:+59588150 | MS.gene40016:CDS |
| CGGGCAATTGTTGATGTTGA+TGG | 0.371200 | 1.4:+59599031 | MS.gene40016:CDS |
| CTCATATAGTCGAGTCTTCA+AGG | 0.372676 | 1.4:+59595376 | MS.gene40016:CDS |
| ATGTCATGATGGACTCAAAT+TGG | 0.374073 | 1.4:+59602211 | MS.gene40016:CDS |
| ATGCGTGGAGGCGGGATGTA+GGG | 0.375669 | 1.4:-59608292 | None:intergenic |
| ATAATAATGTACCTCAACTA+TGG | 0.377602 | 1.4:-59602033 | None:intergenic |
| TTCTGCAGAATATCGTGAAA+TGG | 0.382371 | 1.4:+59590550 | MS.gene40016:CDS |
| ATTGCATGGCACTAGTATCT+TGG | 0.383850 | 1.4:-59590932 | None:intergenic |
| TTCCCATATATTCCATAAAT+GGG | 0.395687 | 1.4:+59603872 | MS.gene40016:CDS |
| TAGTAACGTTGACATGGGTT+TGG | 0.399138 | 1.4:+59587906 | MS.gene40016:CDS |
| ATCTCCTATTTGAAGAAACT+TGG | 0.400100 | 1.4:+59608257 | MS.gene40016:CDS |
| TTGCAGAGGTTCCGTTGAAC+AGG | 0.400611 | 1.4:+59587374 | MS.gene40016:CDS |
| GTCATTGCAAGAATGTTTAA+GGG | 0.400801 | 1.4:-59588676 | None:intergenic |
| AGTAACGTTGACATGGGTTT+GGG | 0.403012 | 1.4:+59587907 | MS.gene40016:CDS |
| TGCTCAAAGGGAATATCAAT+TGG | 0.405431 | 1.4:-59587805 | None:intergenic |
| TCGTCATTTCCTATATCCTT+AGG | 0.407997 | 1.4:-59587943 | None:intergenic |
| TTTAATGATTGTAGCTGGTC+CGG | 0.408518 | 1.4:+59588323 | MS.gene40016:CDS |
| GACCAGCTACAATCATTAAA+GGG | 0.409352 | 1.4:-59588320 | None:intergenic |
| TGCCGTTTGCTTCCCAGCTA+TGG | 0.414873 | 1.4:-59588743 | None:intergenic |
| TGTACCGTTGATATGAGTTT+GGG | 0.415331 | 1.4:+59588099 | MS.gene40016:CDS |
| AAACGTATTGGAGCCATAGC+TGG | 0.416341 | 1.4:+59588730 | MS.gene40016:CDS |
| ATAAACGTGCTCATCTTATG+AGG | 0.419539 | 1.4:+59606854 | MS.gene40016:CDS |
| AATTATTGGTGACGATGATC+AGG | 0.421373 | 1.4:+59590995 | MS.gene40016:CDS |
| GGACATTGTCTTCATAGTTA+AGG | 0.424282 | 1.4:+59601220 | MS.gene40016:CDS |
| TGCAAATTCTGCAAGCTCAC+TGG | 0.424638 | 1.4:-59603682 | None:intergenic |
| TCCTATCCCGAAAAGCCATT+TGG | 0.425119 | 1.4:-59591813 | None:intergenic |
| CCCTAAACAGTTTAAGGATA+AGG | 0.425972 | 1.4:+59589761 | MS.gene40016:CDS |
| AAATCTGCGGTGAAAGCAGC+TGG | 0.426292 | 1.4:+59588021 | MS.gene40016:CDS |
| GTCCAAATCAGTGGTACAAC+AGG | 0.428287 | 1.4:-59603616 | None:intergenic |
| TGCGGTGAAAGCAGCTGGGC+AGG | 0.428654 | 1.4:+59588026 | MS.gene40016:CDS |
| CATTGAGGTAAGAGGGGAAA+AGG | 0.429872 | 1.4:+59600946 | MS.gene40016:CDS |
| ACCCCTTTAATGATTGTAGC+TGG | 0.429977 | 1.4:+59588318 | MS.gene40016:CDS |
| TGCTTCATCACAGCTTAAGC+TGG | 0.430695 | 1.4:-59606677 | None:intergenic |
| AGTGAAAACATCCGGGGTGG+AGG | 0.432885 | 1.4:+59587654 | MS.gene40016:CDS |
| AAGGAAATGTCAGAAGATAA+AGG | 0.433329 | 1.4:+59600965 | MS.gene40016:CDS |
| AGCCCATTTATGGAATATAT+GGG | 0.435807 | 1.4:-59603874 | None:intergenic |
| TCCGCGGATTTCTGCTCAAA+GGG | 0.437426 | 1.4:-59587817 | None:intergenic |
| TCGTTAAAACCTTCCTTCCA+TGG | 0.439801 | 1.4:-59597315 | None:intergenic |
| ATTGTAGCTGGTCCGGGAAG+TGG | 0.442729 | 1.4:+59588330 | MS.gene40016:CDS |
| AAGGGTTTATGCGACGTTGA+TGG | 0.446582 | 1.4:+59587313 | MS.gene40016:CDS |
| GAAATACCTTCTTGAGCAAC+GGG | 0.450690 | 1.4:+59599012 | MS.gene40016:intron |
| TTCACTGTAGTTTGAGTGAA+AGG | 0.459853 | 1.4:+59587440 | MS.gene40016:CDS |
| CCATTTCAGGCCAAAGCCTC+AGG | 0.460475 | 1.4:+59590521 | MS.gene40016:intron |
| TTGAGCAAATTATTTGGCAC+AGG | 0.462449 | 1.4:-59603639 | None:intergenic |
| TTAAAGATTGAGAATGCAAT+GGG | 0.465257 | 1.4:+59607541 | MS.gene40016:CDS |
| AAATGCAAAACCAGGAAAAT+GGG | 0.465715 | 1.4:+59587032 | None:intergenic |
| GATGCGTGGAGGCGGGATGT+AGG | 0.469088 | 1.4:-59608293 | None:intergenic |
| AAATCCGCAGTGAAAACATC+CGG | 0.469826 | 1.4:+59587646 | MS.gene40016:CDS |
| TCTGCAGAATATCGTGAAAT+GGG | 0.469910 | 1.4:+59590551 | MS.gene40016:CDS |
| CCTTTGAAATCGTGTAATAG+AGG | 0.470147 | 1.4:-59601990 | None:intergenic |
| TGGTGAAGAGATGGATGAAT+CGG | 0.470569 | 1.4:-59587110 | None:intergenic |
| TTGAACAGGCTACATTCATC+GGG | 0.470832 | 1.4:+59587388 | MS.gene40016:CDS |
| TTGAGGAAGGAGTGGCTTTG+AGG | 0.473850 | 1.4:-59587077 | None:intergenic |
| TCATTTGTCCTGTAGGCAAA+AGG | 0.475606 | 1.4:+59601188 | MS.gene40016:intron |
| AGTGCTGTTTCTGAGGGTAT+AGG | 0.477579 | 1.4:+59588126 | MS.gene40016:CDS |
| CTCCGCGGATTTCTGCTCAA+AGG | 0.481925 | 1.4:-59587818 | None:intergenic |
| CATGATGGACTCAAATTGGC+AGG | 0.482295 | 1.4:+59602215 | MS.gene40016:CDS |
| GTGAAAACATCCGGGGTGGA+GGG | 0.483961 | 1.4:+59587655 | MS.gene40016:CDS |
| ATTACGAAAGGAAATAAATC+CGG | 0.484333 | 1.4:-59591172 | None:intergenic |
| TTAATGATTGTAGCTGGTCC+GGG | 0.484823 | 1.4:+59588324 | MS.gene40016:CDS |
| CGTTAAAACCTTCCTTCCAT+GGG | 0.486757 | 1.4:-59597314 | None:intergenic |
| GAGGCGGGATGTAGGGGTCA+TGG | 0.489449 | 1.4:-59608285 | None:intergenic |
| GGGAACCAGTGCTGTTTCTG+AGG | 0.489910 | 1.4:+59588119 | MS.gene40016:CDS |
| TCAGCAGATAACTGTTCCTA+TGG | 0.489914 | 1.4:+59591642 | MS.gene40016:CDS |
| AGATGAGCACGTTTATCAGC+AGG | 0.489996 | 1.4:-59606847 | None:intergenic |
| CCAAATTCATTGAGGTAAGA+GGG | 0.490121 | 1.4:+59600939 | MS.gene40016:CDS |
| GTTGAACAGGCTACATTCAT+CGG | 0.491263 | 1.4:+59587387 | MS.gene40016:CDS |
| ATTCTTCAACTGACATCGCT+TGG | 0.495343 | 1.4:-59591413 | None:intergenic |
| CAACCTCTTTGGATCTTGAA+AGG | 0.496114 | 1.4:-59603907 | None:intergenic |
| TCCAAAGAGGTTGCTAGATA+AGG | 0.497008 | 1.4:+59603917 | MS.gene40016:CDS |
| GGCGTTAGATCATAGCTGTC+AGG | 0.498430 | 1.4:+59588047 | MS.gene40016:CDS |
| AAAATACCGTTTAACATTCA+CGG | 0.498668 | 1.4:+59591835 | MS.gene40016:CDS |
| TTAAGGATAAGGCAAAGAAA+TGG | 0.499083 | 1.4:+59589772 | MS.gene40016:CDS |
| TCTGCAAGAGGAACTCTCTT+CGG | 0.500691 | 1.4:-59587358 | None:intergenic |
| GGAACCAGTGCTGTTTCTGA+GGG | 0.501826 | 1.4:+59588120 | MS.gene40016:CDS |
| ACTAACTACACCGCTCTCGC+TGG | 0.503544 | 1.4:-59587887 | None:intergenic |
| GACACTGACTACCATTCATC+AGG | 0.504509 | 1.4:+59601081 | MS.gene40016:CDS |
| ACGTTGATGGTGCCAAGGGT+AGG | 0.504831 | 1.4:+59587326 | MS.gene40016:CDS |
| TCGAGCGAGGGCAGTGTCGT+TGG | 0.505389 | 1.4:+59587706 | MS.gene40016:CDS |
| GGGGATAGGTCATAGTTGTC+AGG | 0.505448 | 1.4:+59587675 | MS.gene40016:CDS |
| GGAAATGTGGATATGGGATC+GGG | 0.505632 | 1.4:+59587727 | MS.gene40016:CDS |
| TAAGACGAGATGCGTGGAGG+CGG | 0.505673 | 1.4:-59608301 | None:intergenic |
| ACATCCGGGGTGGAGGGGAT+AGG | 0.506031 | 1.4:+59587661 | MS.gene40016:CDS |
| TGAAAACATCCGGGGTGGAG+GGG | 0.507918 | 1.4:+59587656 | MS.gene40016:CDS |
| ACGGCAATGATTTCATAAGA+AGG | 0.508310 | 1.4:+59603715 | MS.gene40016:CDS |
| ACCAGACATCCACAATGGTT+GGG | 0.508385 | 1.4:+59588452 | MS.gene40016:intron |
| CGCGGAGAAAGAAGCTGGGG+TGG | 0.509393 | 1.4:+59587834 | MS.gene40016:CDS |
| AAGACGAGATGCGTGGAGGC+GGG | 0.509628 | 1.4:-59608300 | None:intergenic |
| GCCACGCCGTGAATGTTAAA+CGG | 0.512239 | 1.4:-59591841 | None:intergenic |
| AAGTATTTAGAATATTCCTC+TGG | 0.513130 | 1.4:-59588246 | None:intergenic |
| GCGGAGAAAGAAGCTGGGGT+GGG | 0.515788 | 1.4:+59587835 | MS.gene40016:CDS |
| ATGTGGATAGCGAGACTACT+AGG | 0.515917 | 1.4:+59588199 | MS.gene40016:CDS |
| AAATCCGCGGAGAAAGAAGC+TGG | 0.516342 | 1.4:+59587829 | MS.gene40016:CDS |
| TCATATCAAAACTTGTTCAC+AGG | 0.521101 | 1.4:+59597347 | MS.gene40016:CDS |
| GTTTCTGAGGGTATAGGAAC+TGG | 0.523455 | 1.4:+59588132 | MS.gene40016:CDS |
| AGCAACACCAACTGACAAGC+AGG | 0.524799 | 1.4:+59607567 | MS.gene40016:CDS |
| GTTAAAGATTGAGAATGCAA+TGG | 0.526126 | 1.4:+59607540 | MS.gene40016:CDS |
| TAACCTGCAGATAATTATGA+AGG | 0.528096 | 1.4:+59591551 | MS.gene40016:intron |
| TGGAAATGTGGATATGGGAT+CGG | 0.528301 | 1.4:+59587726 | MS.gene40016:CDS |
| ATGCTTCAAACAGCACTGCC+TGG | 0.528925 | 1.4:+59595341 | MS.gene40016:CDS |
| CGTTGATGGTGCCAAGGGTA+GGG | 0.529273 | 1.4:+59587327 | MS.gene40016:CDS |
| AAAGCGAGAAGGCCATCAAA+AGG | 0.530917 | 1.4:+59603587 | MS.gene40016:CDS |
| ATTCTTACCTGCTTGTCAGT+TGG | 0.530991 | 1.4:-59607574 | None:intergenic |
| GGGGATAGATCATAGCTGTC+AGG | 0.532802 | 1.4:+59587855 | MS.gene40016:CDS |
| TGCGTGGAGGCGGGATGTAG+GGG | 0.533503 | 1.4:-59608291 | None:intergenic |
| GCTGAAATGAGAAAACGTAT+TGG | 0.534321 | 1.4:+59588718 | MS.gene40016:CDS |
| TGCAATTCTCTACCGTAGGC+GGG | 0.534781 | 1.4:+59591671 | MS.gene40016:CDS |
| TACCAGACATCCACAATGGT+TGG | 0.537238 | 1.4:+59588451 | MS.gene40016:intron |
| CGGGATAGTTACCTGATGAA+TGG | 0.538107 | 1.4:-59601092 | None:intergenic |
| GGCTTTACTTCCTTTCGAGA+AGG | 0.538440 | 1.4:+59595397 | MS.gene40016:CDS |
| CGGAGAAAGAAGCTGGGGTG+GGG | 0.539549 | 1.4:+59587836 | MS.gene40016:CDS |
| CCTTAGAAGCTTGTATTGCA+TGG | 0.544871 | 1.4:-59590946 | None:intergenic |
| CGATCTTACCCATGGAAGGA+AGG | 0.545407 | 1.4:+59597306 | MS.gene40016:CDS |
| TGAAATTCTAGAAGATGATG+AGG | 0.547891 | 1.4:-59602340 | None:intergenic |
| AGAAATACCTTCTTGAGCAA+CGG | 0.549166 | 1.4:+59599011 | MS.gene40016:intron |
| GGAAAGAGAAGTTACTGGTA+TGG | 0.549677 | 1.4:-59587130 | None:intergenic |
| TCTCCTATTTGAAGAAACTT+GGG | 0.551625 | 1.4:+59608258 | MS.gene40016:CDS |
| TTTAGAATATTCCTCTGGCA+TGG | 0.553981 | 1.4:-59588241 | None:intergenic |
| AGGCTACATTCATCGGGGAA+TGG | 0.556340 | 1.4:+59587394 | MS.gene40016:CDS |
| CTTATCCTTAAACTGTTTAG+GGG | 0.556793 | 1.4:-59589760 | None:intergenic |
| AACGTATTGGAGCCATAGCT+GGG | 0.558250 | 1.4:+59588731 | MS.gene40016:CDS |
| CAATTGCCCGTTGCTCAAGA+AGG | 0.559238 | 1.4:-59599018 | None:intergenic |
| AAGCCTTTCAAGATCCAAAG+AGG | 0.559938 | 1.4:+59603904 | MS.gene40016:CDS |
| ATCAGGGAAAGCCTTCCAAA+TGG | 0.561106 | 1.4:+59591798 | MS.gene40016:CDS |
| TTTAGGGGTCTTTAGACCAT+CGG | 0.561700 | 1.4:-59589745 | None:intergenic |
| GGCTGTTCCTGCTGTTACTG+TGG | 0.562727 | 1.4:+59587468 | MS.gene40016:CDS |
| TGTAGTTAGTAACGTTGACA+TGG | 0.563921 | 1.4:+59587900 | MS.gene40016:CDS |
| GGGCAGTGTCGTTGGAAATG+TGG | 0.564061 | 1.4:+59587714 | MS.gene40016:CDS |
| ATGCGACGTTGATGGTGCCA+AGG | 0.564526 | 1.4:+59587321 | MS.gene40016:CDS |
| AGCTGGTCCGGGAAGTGGAA+AGG | 0.565779 | 1.4:+59588335 | MS.gene40016:CDS |
| ACTTGAAATCACTAAATGAA+AGG | 0.565834 | 1.4:+59588265 | MS.gene40016:CDS |
| CAGGAGAGAGTCTCGAGCGA+GGG | 0.566241 | 1.4:+59587694 | MS.gene40016:CDS |
| CACCCCAGCTTCTTTCTCCG+CGG | 0.567019 | 1.4:-59587833 | None:intergenic |
| TTACTGGTATGGTGAAGAGA+TGG | 0.569422 | 1.4:-59587119 | None:intergenic |
| GAGAGAGTTTCCAGCGAGAG+CGG | 0.571871 | 1.4:+59587877 | MS.gene40016:CDS |
| AATCCGCAGTGAAAACATCC+GGG | 0.572134 | 1.4:+59587647 | MS.gene40016:CDS |
| CCTCTATTACACGATTTCAA+AGG | 0.573941 | 1.4:+59601990 | MS.gene40016:CDS |
| TCCTGCTGTTACTGTGGCGA+AGG | 0.574137 | 1.4:+59587474 | MS.gene40016:CDS |
| AGCCATAGCTGGGAAGCAAA+CGG | 0.574908 | 1.4:+59588741 | MS.gene40016:CDS |
| TTGCAATTCTCTACCGTAGG+CGG | 0.575068 | 1.4:+59591670 | MS.gene40016:CDS |
| GTTTGGAAAATCATTACGAA+AGG | 0.576451 | 1.4:-59591184 | None:intergenic |
| GAGAATTGCAATGTTGCCAT+AGG | 0.576740 | 1.4:-59591658 | None:intergenic |
| TTCTGCAGAAGTTCTTCCTG+AGG | 0.577530 | 1.4:-59590537 | None:intergenic |
| TGATAACTCTTCTGGATCCA+AGG | 0.579242 | 1.4:+59591444 | MS.gene40016:CDS |
| ATCATCATCCAATAGTCCCC+TGG | 0.580237 | 1.4:-59587578 | None:intergenic |
| CGGAACTCGAACCCTACCCT+TGG | 0.582753 | 1.4:-59587338 | None:intergenic |
| ATGTTGCAATGACTCGTGCT+CGG | 0.583624 | 1.4:+59602169 | MS.gene40016:CDS |
| TCCTTCGCCACAGTAACAGC+AGG | 0.583894 | 1.4:-59587475 | None:intergenic |
| TGCGACGTTGATGGTGCCAA+GGG | 0.587453 | 1.4:+59587322 | MS.gene40016:CDS |
| CATATCAAAACTTGTTCACA+GGG | 0.588123 | 1.4:+59597348 | MS.gene40016:CDS |
| TCCTCTGGCATGGTTCCACT+CGG | 0.589774 | 1.4:-59588231 | None:intergenic |
| GTCGTTGGAAATGTGGATAT+GGG | 0.589941 | 1.4:+59587721 | MS.gene40016:CDS |
| GATGAGCACGTTTATCAGCA+GGG | 0.593743 | 1.4:-59606846 | None:intergenic |
| TTTGTCTACCAAATTCATTG+AGG | 0.593811 | 1.4:+59600931 | MS.gene40016:CDS |
| GAAGAGAGTTCCTCTTGCAG+AGG | 0.596350 | 1.4:+59587360 | MS.gene40016:CDS |
| CAAAACTCGCCCAACCATTG+TGG | 0.596725 | 1.4:-59588461 | None:intergenic |
| ACAGCGGAATGCAATTATTG+AGG | 0.596962 | 1.4:+59589656 | MS.gene40016:CDS |
| GATGAATGTAGCCTGTTCAA+CGG | 0.598121 | 1.4:-59587385 | None:intergenic |
| ATCCCGAAAAGCCATTTGGA+AGG | 0.598953 | 1.4:-59591809 | None:intergenic |
| GAAGAGATGGATGAATCGGA+AGG | 0.600187 | 1.4:-59587106 | None:intergenic |
| CGATTTCAAAGGTGTTGTGA+AGG | 0.602419 | 1.4:+59602001 | MS.gene40016:CDS |
| TGTAGGCAAAAGGTTTAGAG+TGG | 0.605902 | 1.4:+59601198 | MS.gene40016:intron |
| TTCAACGGAACCTCTGCAAG+AGG | 0.607424 | 1.4:-59587370 | None:intergenic |
| GAGAATGTTTCAAGCGAGAG+CGG | 0.608079 | 1.4:+59588069 | MS.gene40016:CDS |
| TTGATTGGAGAAGCGTCCGA+TGG | 0.609042 | 1.4:+59589729 | MS.gene40016:CDS |
| CATTAAAGGGGTAGAAACAT+CGG | 0.609117 | 1.4:-59588307 | None:intergenic |
| CGCAGTGAAAACATCCGGGG+TGG | 0.611066 | 1.4:+59587651 | MS.gene40016:CDS |
| CTTTGAAATCGTGTAATAGA+GGG | 0.611912 | 1.4:-59601989 | None:intergenic |
| TGAGCAAATTATTTGGCACA+GGG | 0.615285 | 1.4:-59603638 | None:intergenic |
| TCAGGAGAGAGTCTCGAGCG+AGG | 0.615530 | 1.4:+59587693 | MS.gene40016:CDS |
| TAAACGTGCTCATCTTATGA+GGG | 0.616051 | 1.4:+59606855 | MS.gene40016:CDS |
| GAAACTCCAAGGAAAGAACA+TGG | 0.616491 | 1.4:+59587520 | MS.gene40016:CDS |
| AATCCGCGGAGAAAGAAGCT+GGG | 0.618912 | 1.4:+59587830 | MS.gene40016:CDS |
| CAAATTCATTGAGGTAAGAG+GGG | 0.620448 | 1.4:+59600940 | MS.gene40016:CDS |
| GGAGCGATCTTACCCATGGA+AGG | 0.621578 | 1.4:+59597302 | MS.gene40016:intron |
| TGGCACAGGGTCCAAATCAG+TGG | 0.622015 | 1.4:-59603625 | None:intergenic |
| AATTCTTAATATATGGTCAG+TGG | 0.622709 | 1.4:+59589631 | MS.gene40016:CDS |
| TATGAGTCATCGTCACAACC+AGG | 0.624960 | 1.4:-59595359 | None:intergenic |
| GTAGTTAGTAACGTTGACAT+GGG | 0.625581 | 1.4:+59587901 | MS.gene40016:CDS |
| GAACTACAAATAAAGCGAGA+AGG | 0.625987 | 1.4:+59603576 | MS.gene40016:CDS |
| CATAGGAGCGATCTTACCCA+TGG | 0.630306 | 1.4:+59597298 | MS.gene40016:intron |
| CAATTGTTGATGTTGATGGA+GGG | 0.630795 | 1.4:+59599035 | MS.gene40016:CDS |
| GCAATTGTTGATGTTGATGG+AGG | 0.638860 | 1.4:+59599034 | MS.gene40016:CDS |
| GAAATTCTAGAAGATGATGA+GGG | 0.640072 | 1.4:-59602339 | None:intergenic |
| ACCGTTTAACATTCACGGCG+TGG | 0.640575 | 1.4:+59591840 | MS.gene40016:CDS |
| TATACCCTCAGAAACAGCAC+TGG | 0.644074 | 1.4:-59588124 | None:intergenic |
| AATCTGCGGTGAAAGCAGCT+GGG | 0.645198 | 1.4:+59588022 | MS.gene40016:CDS |
| CAAGAAACATCACCCGCCTA+CGG | 0.646039 | 1.4:-59591683 | None:intergenic |
| GGACACTGCAGCCATAGTTG+AGG | 0.646812 | 1.4:+59602022 | MS.gene40016:CDS |
| ATTTCTTTCAGAAATCGTGA+AGG | 0.648622 | 1.4:-59602316 | None:intergenic |
| TATATGGTCAGTGGCAACAG+CGG | 0.650024 | 1.4:+59589640 | MS.gene40016:CDS |
| AAGAGATGGATGAATCGGAA+GGG | 0.652168 | 1.4:-59587105 | None:intergenic |
| ACCAGCTACAATCATTAAAG+GGG | 0.653481 | 1.4:-59588319 | None:intergenic |
| ATGACCTATCCCCTCCACCC+CGG | 0.654841 | 1.4:-59587665 | None:intergenic |
| GGATCATAAAGAAGAACATG+TGG | 0.655055 | 1.4:+59588182 | MS.gene40016:CDS |
| CTACATTCATCGGGGAATGG+CGG | 0.655332 | 1.4:+59587397 | MS.gene40016:CDS |
| CTCCACACGTTACATTGTCG+AGG | 0.655441 | 1.4:+59591363 | MS.gene40016:CDS |
| GAATTTGCAGAGGCAAACAA+CGG | 0.656034 | 1.4:+59603696 | MS.gene40016:CDS |
| TCCCTTTGAGCAGAAATCCG+CGG | 0.657743 | 1.4:+59587816 | MS.gene40016:CDS |
| GACACAGAAAATGCAAAACC+AGG | 0.659017 | 1.4:+59587024 | None:intergenic |
| TGAGCTTGCAGAATTTGCAG+AGG | 0.660838 | 1.4:+59603686 | MS.gene40016:CDS |
| GTAGGCAAAAGGTTTAGAGT+GGG | 0.663253 | 1.4:+59601199 | MS.gene40016:intron |
| TGTAGCGAACATGATACCTG+AGG | 0.664760 | 1.4:+59598621 | MS.gene40016:CDS |
| ACATTGCAATTCTCTACCGT+AGG | 0.665868 | 1.4:+59591667 | MS.gene40016:CDS |
| GGTTCCCAAACTCATATCAA+CGG | 0.666164 | 1.4:-59588103 | None:intergenic |
| TATGAAGGAGTGTCACAATG+AGG | 0.672349 | 1.4:+59591566 | MS.gene40016:CDS |
| ACAAATTGATATTATGTGTG+AGG | 0.677973 | 1.4:+59587621 | MS.gene40016:CDS |
| GCTCAATAAGACGAGATGCG+TGG | 0.679541 | 1.4:-59608307 | None:intergenic |
| ATCCGCGGAGAAAGAAGCTG+GGG | 0.679676 | 1.4:+59587831 | MS.gene40016:CDS |
| ATGATACCAGACATCCACAA+TGG | 0.689594 | 1.4:+59588447 | MS.gene40016:intron |
| CAATAAGACGAGATGCGTGG+AGG | 0.691429 | 1.4:-59608304 | None:intergenic |
| AGCCTCGACAATGTAACGTG+TGG | 0.694105 | 1.4:-59591365 | None:intergenic |
| ACCGAGTGGAACCATGCCAG+AGG | 0.699060 | 1.4:+59588230 | MS.gene40016:CDS |
| ATCCGCAGTGAAAACATCCG+GGG | 0.704488 | 1.4:+59587648 | MS.gene40016:CDS |
| ACTAGGAAAAGTTTACCGAG+TGG | 0.721933 | 1.4:+59588216 | MS.gene40016:CDS |
| ACAGAAGAAGAACAAACACA+AGG | 0.726656 | 1.4:+59605517 | MS.gene40016:CDS |
| TCTTTGTGAGCAGAAATCTG+CGG | 0.753333 | 1.4:+59588008 | MS.gene40016:CDS |
| TGAACAGGCTACATTCATCG+GGG | 0.761674 | 1.4:+59587389 | MS.gene40016:CDS |
| ACTCCAAGGAAAGAACATGG+AGG | 0.762779 | 1.4:+59587523 | MS.gene40016:CDS |
| TAGTTTGAGTGAAAGGACAG+TGG | 0.769020 | 1.4:+59587447 | MS.gene40016:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 59587034 | 59608346 | 59587034 | ID=MS.gene40016 |
| chr1.4 | mRNA | 59587034 | 59608346 | 59587034 | ID=MS.gene40016.t1;Parent=MS.gene40016 |
| chr1.4 | exon | 59587034 | 59587137 | 59587034 | ID=MS.gene40016.t1.exon1;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59587034 | 59587137 | 59587034 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59587309 | 59588356 | 59587309 | ID=MS.gene40016.t1.exon2;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59587309 | 59588356 | 59587309 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59588457 | 59588498 | 59588457 | ID=MS.gene40016.t1.exon3;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59588457 | 59588498 | 59588457 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59588667 | 59588830 | 59588667 | ID=MS.gene40016.t1.exon4;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59588667 | 59588830 | 59588667 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59589614 | 59589812 | 59589614 | ID=MS.gene40016.t1.exon5;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59589614 | 59589812 | 59589614 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59590530 | 59590586 | 59590530 | ID=MS.gene40016.t1.exon6;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59590530 | 59590586 | 59590530 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59590686 | 59590791 | 59590686 | ID=MS.gene40016.t1.exon7;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59590686 | 59590791 | 59590686 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59590883 | 59591016 | 59590883 | ID=MS.gene40016.t1.exon8;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59590883 | 59591016 | 59590883 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59591141 | 59591215 | 59591141 | ID=MS.gene40016.t1.exon9;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59591141 | 59591215 | 59591141 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59591340 | 59591465 | 59591340 | ID=MS.gene40016.t1.exon10;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59591340 | 59591465 | 59591340 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59591561 | 59591692 | 59591561 | ID=MS.gene40016.t1.exon11;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59591561 | 59591692 | 59591561 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59591796 | 59591879 | 59591796 | ID=MS.gene40016.t1.exon12;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59591796 | 59591879 | 59591796 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59595320 | 59595433 | 59595320 | ID=MS.gene40016.t1.exon13;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59595320 | 59595433 | 59595320 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59595563 | 59595663 | 59595563 | ID=MS.gene40016.t1.exon14;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59595563 | 59595663 | 59595563 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59597303 | 59597369 | 59597303 | ID=MS.gene40016.t1.exon15;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59597303 | 59597369 | 59597303 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59598592 | 59598642 | 59598592 | ID=MS.gene40016.t1.exon16;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59598592 | 59598642 | 59598592 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59599013 | 59599090 | 59599013 | ID=MS.gene40016.t1.exon17;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59599013 | 59599090 | 59599013 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59600896 | 59601102 | 59600896 | ID=MS.gene40016.t1.exon18;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59600896 | 59601102 | 59600896 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59601203 | 59601241 | 59601203 | ID=MS.gene40016.t1.exon19;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59601203 | 59601241 | 59601203 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59601972 | 59602043 | 59601972 | ID=MS.gene40016.t1.exon20;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59601972 | 59602043 | 59601972 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59602150 | 59602236 | 59602150 | ID=MS.gene40016.t1.exon21;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59602150 | 59602236 | 59602150 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59602307 | 59602363 | 59602307 | ID=MS.gene40016.t1.exon22;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59602307 | 59602363 | 59602307 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59603558 | 59603736 | 59603558 | ID=MS.gene40016.t1.exon23;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59603558 | 59603736 | 59603558 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59603845 | 59603938 | 59603845 | ID=MS.gene40016.t1.exon24;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59603845 | 59603938 | 59603845 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59605488 | 59605538 | 59605488 | ID=MS.gene40016.t1.exon25;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59605488 | 59605538 | 59605488 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59606655 | 59606717 | 59606655 | ID=MS.gene40016.t1.exon26;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59606655 | 59606717 | 59606655 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59606826 | 59606885 | 59606826 | ID=MS.gene40016.t1.exon27;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59606826 | 59606885 | 59606826 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59607526 | 59607588 | 59607526 | ID=MS.gene40016.t1.exon28;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59607526 | 59607588 | 59607526 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| chr1.4 | exon | 59608257 | 59608346 | 59608257 | ID=MS.gene40016.t1.exon29;Parent=MS.gene40016.t1 |
| chr1.4 | CDS | 59608257 | 59608346 | 59608257 | ID=cds.MS.gene40016.t1;Parent=MS.gene40016.t1 |
| Gene Sequence |
| Protein sequence |
