Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063785.t1 | GAU41855.1 | 97.7 | 133 | 3 | 0 | 1 | 133 | 1 | 133 | 3.00E-65 | 257.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063785.t1 | Q9LHI0 | 65.1 | 129 | 43 | 2 | 4 | 132 | 6 | 132 | 1.8e-42 | 173.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063785.t1 | A0A2Z6P0Q0 | 97.7 | 133 | 3 | 0 | 1 | 133 | 1 | 133 | 2.2e-65 | 257.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050237 | MS.gene063785 | 0.820705 | 5.96E-53 | -1.69E-46 |
| MS.gene050719 | MS.gene063785 | 0.804774 | 1.84E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene063785 | 0.80243 | 5.63E-49 | -1.69E-46 |
| MS.gene051757 | MS.gene063785 | 0.816444 | 5.51E-52 | -1.69E-46 |
| MS.gene052133 | MS.gene063785 | 0.812487 | 4.14E-51 | -1.69E-46 |
| MS.gene052561 | MS.gene063785 | 0.812001 | 5.28E-51 | -1.69E-46 |
| MS.gene053883 | MS.gene063785 | 0.801212 | 1.00E-48 | -1.69E-46 |
| MS.gene054584 | MS.gene063785 | 0.806654 | 7.40E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene063785 | 0.825378 | 4.84E-54 | -1.69E-46 |
| MS.gene059015 | MS.gene063785 | 0.801681 | 8.03E-49 | -1.69E-46 |
| MS.gene06001 | MS.gene063785 | 0.815168 | 1.06E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063785.t1 | MTR_8g040150 | 96.992 | 133 | 4 | 0 | 1 | 133 | 1 | 133 | 1.38e-95 | 271 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063785.t1 | AT3G12260 | 65.116 | 129 | 43 | 2 | 4 | 132 | 6 | 132 | 7.36e-61 | 183 |
Find 19 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACGTACTGACCGACGATA+TGG | 0.351109 | 8.1:-63973111 | None:intergenic |
| TCTGTGAGATTCACTGAGTT+TGG | 0.384858 | 8.1:-63969870 | None:intergenic |
| ATTATAAGCTACCTTGGGAT+TGG | 0.458219 | 8.1:-63970039 | None:intergenic |
| TATGGTGCCTCTGCTTTGAA+TGG | 0.475342 | 8.1:-63973093 | None:intergenic |
| AGAGTTGGCCTCAAAAGAGC+AGG | 0.484872 | 8.1:+63973159 | MS.gene063785:CDS |
| TTTGCGGATCTCAGCGGCGA+TGG | 0.539347 | 8.1:-63970003 | None:intergenic |
| GTGAGATTCACTGAGTTTGG+TGG | 0.544510 | 8.1:-63969867 | None:intergenic |
| TAGATCTTTACCTACTGTCA+TGG | 0.550824 | 8.1:+63969932 | MS.gene063785:CDS |
| CAGTACGTAGTTGGCCGCCG+TGG | 0.590145 | 8.1:+63973124 | MS.gene063785:CDS |
| TGGACTAGAGCAGCAAGAGT+TGG | 0.600415 | 8.1:+63973144 | MS.gene063785:CDS |
| ATCGTCGGTCAGTACGTAGT+TGG | 0.604555 | 8.1:+63973115 | MS.gene063785:CDS |
| GGTAGAACGAAGCTGAGAAA+CGG | 0.608148 | 8.1:-63969982 | None:intergenic |
| TTGTAAACTTCCATGACAGT+AGG | 0.616035 | 8.1:-63969942 | None:intergenic |
| ACTCTTGCTGCTCTAGTCCA+CGG | 0.617278 | 8.1:-63973141 | None:intergenic |
| TGATCATATCACCAATCCCA+AGG | 0.623388 | 8.1:+63970028 | MS.gene063785:CDS |
| AAGCAGAGGCACCATATCGT+CGG | 0.645960 | 8.1:+63973100 | MS.gene063785:CDS |
| TTGTGAACCATTCAAAGCAG+AGG | 0.651015 | 8.1:+63973086 | MS.gene063785:CDS |
| GAGTTGGCCTCAAAAGAGCA+GGG | 0.675119 | 8.1:+63973160 | MS.gene063785:CDS |
| CTTGCTGCTCTAGTCCACGG+CGG | 0.802478 | 8.1:-63973138 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAATATTTATACAAAAAA+TGG | + | chr8.1:63972159-63972178 | MS.gene063785:intron | 10.0% |
| !!! | TTAATTTTGTATTATTTTGA+CGG | + | chr8.1:63970327-63970346 | MS.gene063785:intron | 10.0% |
| !!! | TTCTCAAAATTTTATTTTAT+TGG | - | chr8.1:63970568-63970587 | None:intergenic | 10.0% |
| !! | AAAAATACAATAACTTCAAA+TGG | - | chr8.1:63972699-63972718 | None:intergenic | 15.0% |
| !! | ACATTAACTTACAAAAAAAA+AGG | - | chr8.1:63972731-63972750 | None:intergenic | 15.0% |
| !! | CATTAACTTACAAAAAAAAA+GGG | - | chr8.1:63972730-63972749 | None:intergenic | 15.0% |
| !! | TAATTATTGTTGGAAAAAAA+AGG | + | chr8.1:63972267-63972286 | MS.gene063785:intron | 15.0% |
| !! | TCTTTATATAAAACACATAT+AGG | + | chr8.1:63970524-63970543 | MS.gene063785:intron | 15.0% |
| !!! | AAATTCCATTTTCAATTTTT+TGG | + | chr8.1:63970099-63970118 | MS.gene063785:intron | 15.0% |
| !!! | AATTCCATTTTCAATTTTTT+GGG | + | chr8.1:63970100-63970119 | MS.gene063785:intron | 15.0% |
| !!! | AGTGTTTTCTATAAATTATA+TGG | + | chr8.1:63970666-63970685 | MS.gene063785:intron | 15.0% |
| !!! | ATTATTGATATTCTGAAAAA+TGG | - | chr8.1:63971129-63971148 | None:intergenic | 15.0% |
| !!! | GTGTTTTCTATAAATTATAT+GGG | + | chr8.1:63970667-63970686 | MS.gene063785:intron | 15.0% |
| !!! | TGTTTTCATTTGATTTTAAT+TGG | + | chr8.1:63970211-63970230 | MS.gene063785:intron | 15.0% |
| !! | AATCTCAATAAACATAACTT+TGG | - | chr8.1:63970628-63970647 | None:intergenic | 20.0% |
| !! | AATTAAAGATTAGCAAACAA+AGG | - | chr8.1:63972519-63972538 | None:intergenic | 20.0% |
| !! | AGTGAATGAAGTAAAAATAA+TGG | - | chr8.1:63972135-63972154 | None:intergenic | 20.0% |
| !! | ATAAAGATTGATATTCTCTT+AGG | + | chr8.1:63970484-63970503 | MS.gene063785:intron | 20.0% |
| !! | GAAGAAAACAAAGTTAAATA+AGG | - | chr8.1:63972653-63972672 | None:intergenic | 20.0% |
| !! | GACACATTTATAATTATTGT+TGG | + | chr8.1:63972257-63972276 | MS.gene063785:intron | 20.0% |
| !! | GTGAATGAAGTAAAAATAAT+GGG | - | chr8.1:63972134-63972153 | None:intergenic | 20.0% |
| !! | TCAGAATTATTGATATATCT+AGG | - | chr8.1:63971768-63971787 | None:intergenic | 20.0% |
| !! | TGAAAAATTTACAGCAAATT+TGG | - | chr8.1:63970870-63970889 | None:intergenic | 20.0% |
| !!! | CTAATCTTTAATTTGAAAAC+GGG | + | chr8.1:63972526-63972545 | MS.gene063785:intron | 20.0% |
| !!! | GAGATTATGGTTTTAAAATT+TGG | + | chr8.1:63972462-63972481 | MS.gene063785:intron | 20.0% |
| !!! | GCTAATCTTTAATTTGAAAA+CGG | + | chr8.1:63972525-63972544 | MS.gene063785:intron | 20.0% |
| !!! | TTTTGCATTCTTTTGTATAT+AGG | + | chr8.1:63970456-63970475 | MS.gene063785:intron | 20.0% |
| !!! | TTTTTTTGTAAGTTAATGTC+TGG | + | chr8.1:63972732-63972751 | MS.gene063785:intron | 20.0% |
| ! | AAAAATATCTGATACAAGAG+AGG | + | chr8.1:63971838-63971857 | MS.gene063785:intron | 25.0% |
| ! | AAATTCAAAGTTTGGTATGT+TGG | + | chr8.1:63972325-63972344 | MS.gene063785:intron | 25.0% |
| ! | AAGTTATTATAAGCTACCTT+GGG | - | chr8.1:63970047-63970066 | None:intergenic | 25.0% |
| ! | AATTCAAAGTTTGGTATGTT+GGG | + | chr8.1:63972326-63972345 | MS.gene063785:intron | 25.0% |
| ! | ATGTTCTTTGATACCATAAT+AGG | + | chr8.1:63971643-63971662 | MS.gene063785:intron | 25.0% |
| ! | CATTTCAGATATACATGATT+TGG | + | chr8.1:63970785-63970804 | MS.gene063785:intron | 25.0% |
| ! | GAACATATATATAGAGCTAT+GGG | - | chr8.1:63971081-63971100 | None:intergenic | 25.0% |
| ! | GATAGAAGTTATATATCGTA+TGG | + | chr8.1:63972391-63972410 | MS.gene063785:intron | 25.0% |
| ! | TAACCTTTATATAGAGCTAT+GGG | + | chr8.1:63971737-63971756 | MS.gene063785:intron | 25.0% |
| ! | TAAGTTATTATAAGCTACCT+TGG | - | chr8.1:63970048-63970067 | None:intergenic | 25.0% |
| ! | TAGGTTATTTAGTGTATCTT+TGG | + | chr8.1:63970743-63970762 | MS.gene063785:intron | 25.0% |
| ! | TATATATCGTATGGTATGAT+AGG | + | chr8.1:63972400-63972419 | MS.gene063785:intron | 25.0% |
| ! | TATTATGGTATCAAAGAACA+TGG | - | chr8.1:63971644-63971663 | None:intergenic | 25.0% |
| ! | TCTATAAATTATATGGGACT+AGG | + | chr8.1:63970673-63970692 | MS.gene063785:intron | 25.0% |
| ! | TCTTCCCAAAAAATTGAAAA+TGG | - | chr8.1:63970107-63970126 | None:intergenic | 25.0% |
| ! | TGAACATATATATAGAGCTA+TGG | - | chr8.1:63971082-63971101 | None:intergenic | 25.0% |
| ! | TTAACCTTTATATAGAGCTA+TGG | + | chr8.1:63971736-63971755 | MS.gene063785:intron | 25.0% |
| ! | TTCAGAAAATGAATGGATAT+AGG | + | chr8.1:63970180-63970199 | MS.gene063785:intron | 25.0% |
| ! | TTGTAAAAATCTTCAAAGAC+AGG | + | chr8.1:63972214-63972233 | MS.gene063785:intron | 25.0% |
| ! | TTTATCTCTTCTAGTCAAAT+AGG | + | chr8.1:63970913-63970932 | MS.gene063785:intron | 25.0% |
| ! | TTTGAATTTCGATAAGCTTA+GGG | - | chr8.1:63972314-63972333 | None:intergenic | 25.0% |
| !! | AGATTGATTCAGAAAATGAA+TGG | + | chr8.1:63970173-63970192 | MS.gene063785:intron | 25.0% |
| !! | AGTTATCTAACGGATATTTA+AGG | + | chr8.1:63972054-63972073 | MS.gene063785:intron | 25.0% |
| !! | ATTTAGTGGCATAATTTTCA+AGG | + | chr8.1:63972367-63972386 | MS.gene063785:intron | 25.0% |
| !! | TAGCTCTATATAAAGGTTAA+CGG | - | chr8.1:63971736-63971755 | None:intergenic | 25.0% |
| !! | TCTGTAAAGGAAGAAATTTT+TGG | + | chr8.1:63972972-63972991 | MS.gene063785:intron | 25.0% |
| !! | TTTAGTGGCATAATTTTCAA+GGG | + | chr8.1:63972368-63972387 | MS.gene063785:intron | 25.0% |
| !!! | AATTTGCTATGATCCTATTA+TGG | - | chr8.1:63971659-63971678 | None:intergenic | 25.0% |
| !!! | ACTTTGATTTTCTTCTGTAA+AGG | + | chr8.1:63972959-63972978 | MS.gene063785:intron | 25.0% |
| !!! | TAGTTACTTTTGGATGTAAT+TGG | + | chr8.1:63970369-63970388 | MS.gene063785:intron | 25.0% |
| !!! | TATTGGTGATTAGTTACTTT+TGG | + | chr8.1:63970359-63970378 | MS.gene063785:intron | 25.0% |
| !!! | TTTGACGGATTTTGTTTTAT+TGG | + | chr8.1:63970342-63970361 | MS.gene063785:intron | 25.0% |
| !!! | TTTTAAAACCATAATCTCGA+CGG | - | chr8.1:63972460-63972479 | None:intergenic | 25.0% |
| AAATGCAGACAGTTATCTAA+CGG | + | chr8.1:63972044-63972063 | MS.gene063785:intron | 30.0% | |
| AACCTTTATATAGAGCTATG+GGG | + | chr8.1:63971738-63971757 | MS.gene063785:intron | 30.0% | |
| AATGTATGGATTCTTACTCA+AGG | - | chr8.1:63972831-63972850 | None:intergenic | 30.0% | |
| ACTAATATTTGTGGACATTC+AGG | + | chr8.1:63973018-63973037 | MS.gene063785:intron | 30.0% | |
| ATCAATGAATTGCAGAAGTA+AGG | + | chr8.1:63971558-63971577 | MS.gene063785:intron | 30.0% | |
| ATCGTTGTCACTAATATTTG+TGG | + | chr8.1:63973009-63973028 | MS.gene063785:intron | 30.0% | |
| CATTTCATGATGAGAAGATA+GGG | + | chr8.1:63972486-63972505 | MS.gene063785:intron | 30.0% | |
| CGACAATGGAAAATTTCATA+GGG | - | chr8.1:63971477-63971496 | None:intergenic | 30.0% | |
| CTTTGAATTTCGATAAGCTT+AGG | - | chr8.1:63972315-63972334 | None:intergenic | 30.0% | |
| GCTTATCGAAATTCAAAGTT+TGG | + | chr8.1:63972317-63972336 | MS.gene063785:intron | 30.0% | |
| GGATGTAATTGGAAGTAAAT+TGG | + | chr8.1:63970380-63970399 | MS.gene063785:intron | 30.0% | |
| TCATTTCATGATGAGAAGAT+AGG | + | chr8.1:63972485-63972504 | MS.gene063785:intron | 30.0% | |
| TCGACAATGGAAAATTTCAT+AGG | - | chr8.1:63971478-63971497 | None:intergenic | 30.0% | |
| TGGCAATGATTATTCTCAAT+AGG | + | chr8.1:63971997-63972016 | MS.gene063785:intron | 30.0% | |
| TGTAAATACTAGCTAACACT+GGG | - | chr8.1:63971956-63971975 | None:intergenic | 30.0% | |
| TTAGTGAAGTCGCTTATATA+TGG | + | chr8.1:63970822-63970841 | MS.gene063785:intron | 30.0% | |
| TTGTAAATACTAGCTAACAC+TGG | - | chr8.1:63971957-63971976 | None:intergenic | 30.0% | |
| ! | ATGAAATTTTCCATTGTCGA+AGG | + | chr8.1:63971478-63971497 | MS.gene063785:intron | 30.0% |
| ! | TATACATGATTTGGCTGAAA+TGG | + | chr8.1:63970794-63970813 | MS.gene063785:intron | 30.0% |
| !! | AATATGATTTGTTGGCTCTA+TGG | + | chr8.1:63970254-63970273 | MS.gene063785:intron | 30.0% |
| !! | AATGGTTTGTTGTTGTTACA+AGG | - | chr8.1:63971111-63971130 | None:intergenic | 30.0% |
| !! | ATGGTTTGTTGTTGTTACAA+GGG | - | chr8.1:63971110-63971129 | None:intergenic | 30.0% |
| !! | TGGTGATATGATCATTTTTG+CGG | - | chr8.1:63970022-63970041 | None:intergenic | 30.0% |
| !! | TTAGTGGCATAATTTTCAAG+GGG | + | chr8.1:63972369-63972388 | MS.gene063785:intron | 30.0% |
| !!! | AGCTCTAAGTTTTTGTTTAC+TGG | + | chr8.1:63971977-63971996 | MS.gene063785:intron | 30.0% |
| !!! | ATTGATATGCTGCTTTTCAA+GGG | + | chr8.1:63973043-63973062 | MS.gene063785:CDS | 30.0% |
| AAATAGCAGGTTCAACTTGT+TGG | - | chr8.1:63971414-63971433 | None:intergenic | 35.0% | |
| AATATAGCACAAGAGAGACT+AGG | - | chr8.1:63970982-63971001 | None:intergenic | 35.0% | |
| AATGAATTGCAGAAGTAAGG+TGG | + | chr8.1:63971561-63971580 | MS.gene063785:intron | 35.0% | |
| AATTATTCAAACAAGCCCGT+GGG | - | chr8.1:63972767-63972786 | None:intergenic | 35.0% | |
| ACATGTGCAAGTAGAATGTA+TGG | - | chr8.1:63972845-63972864 | None:intergenic | 35.0% | |
| AGAACATGGTTGAGATTTCT+AGG | - | chr8.1:63971630-63971649 | None:intergenic | 35.0% | |
| AGATTGATATTCTCTTAGGC+AGG | + | chr8.1:63970488-63970507 | MS.gene063785:intron | 35.0% | |
| AGGAAGAAAGATCATATCCT+AGG | - | chr8.1:63971216-63971235 | None:intergenic | 35.0% | |
| AGGTATTAGAGTCTTTCTCT+TGG | + | chr8.1:63970941-63970960 | MS.gene063785:intron | 35.0% | |
| ATAACTTCCAGTAGTACAAG+AGG | + | chr8.1:63971866-63971885 | MS.gene063785:intron | 35.0% | |
| ATCTCTTCTAGTCAAATAGG+AGG | + | chr8.1:63970916-63970935 | MS.gene063785:intron | 35.0% | |
| ATGAATGTAGTGTTTCAAGC+TGG | + | chr8.1:63970143-63970162 | MS.gene063785:intron | 35.0% | |
| ATGCTCAATACTATCTTCTG+TGG | + | chr8.1:63971386-63971405 | MS.gene063785:intron | 35.0% | |
| ATTATAAGCTACCTTGGGAT+TGG | - | chr8.1:63970042-63970061 | None:intergenic | 35.0% | |
| CCAACAAATCATATTCCCTA+GGG | - | chr8.1:63970249-63970268 | None:intergenic | 35.0% | |
| GAAAATTTCATAGGGATCTG+TGG | - | chr8.1:63971469-63971488 | None:intergenic | 35.0% | |
| GAACATGGTTGAGATTTCTA+GGG | - | chr8.1:63971629-63971648 | None:intergenic | 35.0% | |
| GTAACCATAATTGTTGTCAG+CGG | + | chr8.1:63971047-63971066 | MS.gene063785:intron | 35.0% | |
| GTCTTTCTAAGTACCTTAGA+TGG | + | chr8.1:63971016-63971035 | MS.gene063785:intron | 35.0% | |
| TAACCATAATTGTTGTCAGC+GGG | + | chr8.1:63971048-63971067 | MS.gene063785:intron | 35.0% | |
| TACTTAGAAAGACAGGTACA+GGG | - | chr8.1:63971009-63971028 | None:intergenic | 35.0% | |
| TAGATCTTTACCTACTGTCA+TGG | + | chr8.1:63969932-63969951 | MS.gene063785:CDS | 35.0% | |
| TCTCAATGTTACTCTTGTGT+AGG | + | chr8.1:63970724-63970743 | MS.gene063785:intron | 35.0% | |
| TGGAATTGATTGAAACCCTA+GGG | + | chr8.1:63970231-63970250 | MS.gene063785:intron | 35.0% | |
| TTACTCAAGGAAATACCATC+AGG | - | chr8.1:63972818-63972837 | None:intergenic | 35.0% | |
| TTCTGTGAGACTATTATGCT+CGG | - | chr8.1:63971349-63971368 | None:intergenic | 35.0% | |
| TTGGAATTGATTGAAACCCT+AGG | + | chr8.1:63970230-63970249 | MS.gene063785:intron | 35.0% | |
| TTGTAAACTTCCATGACAGT+AGG | - | chr8.1:63969945-63969964 | None:intergenic | 35.0% | |
| TTTATTCGTTTCAGACCTGA+TGG | + | chr8.1:63972800-63972819 | MS.gene063785:intron | 35.0% | |
| ! | ACAGAAGATCTCTGAAAAGT+TGG | + | chr8.1:63971363-63971382 | MS.gene063785:intron | 35.0% |
| ! | ATCAGGTCTGAAACGAATAA+AGG | - | chr8.1:63972801-63972820 | None:intergenic | 35.0% |
| ! | TAAGTTGTTTCAGCCATGTT+AGG | + | chr8.1:63972616-63972635 | MS.gene063785:intron | 35.0% |
| ! | TCTAAGGTACTTAGAAAGAC+AGG | - | chr8.1:63971016-63971035 | None:intergenic | 35.0% |
| !!! | AAGAAATTTTTGGCCACGAA+AGG | + | chr8.1:63972982-63973001 | MS.gene063785:intron | 35.0% |
| !!! | CATTGATATGCTGCTTTTCA+AGG | + | chr8.1:63973042-63973061 | MS.gene063785:CDS | 35.0% |
| !!! | TTGATATGCTGCTTTTCAAG+GGG | + | chr8.1:63973044-63973063 | MS.gene063785:CDS | 35.0% |
| AATCACGAACACCCAATGTT+TGG | - | chr8.1:63972576-63972595 | None:intergenic | 40.0% | |
| ACTACAGCTGTCACTATCTA+AGG | + | chr8.1:63971787-63971806 | MS.gene063785:intron | 40.0% | |
| ACTATTATGCTCGGAGAAGA+AGG | - | chr8.1:63971340-63971359 | None:intergenic | 40.0% | |
| ACTGCAAATTCCTTCGACAA+TGG | - | chr8.1:63971491-63971510 | None:intergenic | 40.0% | |
| ACTTAGAAAGACAGGTACAG+GGG | - | chr8.1:63971008-63971027 | None:intergenic | 40.0% | |
| ATAAAGGTTAACGGAGCTCT+TGG | - | chr8.1:63971727-63971746 | None:intergenic | 40.0% | |
| ATGTTGGGTTTCTCAGTCTT+TGG | + | chr8.1:63972341-63972360 | MS.gene063785:intron | 40.0% | |
| ATTATATGGGACTAGGCTTG+TGG | + | chr8.1:63970680-63970699 | MS.gene063785:intron | 40.0% | |
| ATTGTCGAAGGAATTTGCAG+TGG | + | chr8.1:63971490-63971509 | MS.gene063785:intron | 40.0% | |
| CAATTATTCAAACAAGCCCG+TGG | - | chr8.1:63972768-63972787 | None:intergenic | 40.0% | |
| CGACAAAGATTGCAAATAGC+AGG | - | chr8.1:63971427-63971446 | None:intergenic | 40.0% | |
| GAAAGATCATATCCTAGGCA+TGG | - | chr8.1:63971211-63971230 | None:intergenic | 40.0% | |
| GAATCTTCCTCTTGTACTAC+TGG | - | chr8.1:63971876-63971895 | None:intergenic | 40.0% | |
| GAATTAACGTTACCATGCCT+AGG | + | chr8.1:63971196-63971215 | MS.gene063785:intron | 40.0% | |
| GACAACGATAAAACCTTTCG+TGG | - | chr8.1:63972998-63973017 | None:intergenic | 40.0% | |
| GCCAACAAATCATATTCCCT+AGG | - | chr8.1:63970250-63970269 | None:intergenic | 40.0% | |
| GGAACAACATTCTTCAGTTG+AGG | - | chr8.1:63971283-63971302 | None:intergenic | 40.0% | |
| GTACTTAGAAAGACAGGTAC+AGG | - | chr8.1:63971010-63971029 | None:intergenic | 40.0% | |
| GTTACAGTTGTCACCATCTA+AGG | - | chr8.1:63971032-63971051 | None:intergenic | 40.0% | |
| TATCCCGCTGACAACAATTA+TGG | - | chr8.1:63971054-63971073 | None:intergenic | 40.0% | |
| TATCTGATACAAGAGAGGCT+AGG | + | chr8.1:63971843-63971862 | MS.gene063785:intron | 40.0% | |
| TCTGTGAGATTCACTGAGTT+TGG | - | chr8.1:63969873-63969892 | None:intergenic | 40.0% | |
| TGATCATATCACCAATCCCA+AGG | + | chr8.1:63970028-63970047 | MS.gene063785:CDS | 40.0% | |
| TGTTGGGTTTCTCAGTCTTT+GGG | + | chr8.1:63972342-63972361 | MS.gene063785:intron | 40.0% | |
| TTCTAGTCAAATAGGAGGCA+AGG | + | chr8.1:63970921-63970940 | MS.gene063785:intron | 40.0% | |
| TTGTCAAACCGTCGAGATTA+TGG | + | chr8.1:63972449-63972468 | MS.gene063785:intron | 40.0% | |
| TTGTGAACCATTCAAAGCAG+AGG | + | chr8.1:63973086-63973105 | MS.gene063785:CDS | 40.0% | |
| ! | AGGTCTGAAACGAATAAAGG+AGG | - | chr8.1:63972798-63972817 | None:intergenic | 40.0% |
| ! | AGTGGTGGAACTTCAATGTA+AGG | + | chr8.1:63971508-63971527 | MS.gene063785:intron | 40.0% |
| ! | ATCCACGAGTTGGATAAGTA+AGG | - | chr8.1:63971260-63971279 | None:intergenic | 40.0% |
| ! | CCCTAGGGAATATGATTTGT+TGG | + | chr8.1:63970246-63970265 | MS.gene063785:intron | 40.0% |
| ! | GTCCCCATAGCTCTATATAA+AGG | - | chr8.1:63971743-63971762 | None:intergenic | 40.0% |
| ! | TCAGTCTTTGGGGAATTTAG+TGG | + | chr8.1:63972353-63972372 | MS.gene063785:intron | 40.0% |
| !! | ATCATTTTTGCGGATCTCAG+CGG | - | chr8.1:63970012-63970031 | None:intergenic | 40.0% |
| !! | CTAAGTTTTGTGCATTGCCT+GGG | + | chr8.1:63972550-63972569 | MS.gene063785:intron | 40.0% |
| !! | GTAATCGATTTGATGCATCG+AGG | + | chr8.1:63972899-63972918 | MS.gene063785:intron | 40.0% |
| !! | TCTAAGTTTTGTGCATTGCC+TGG | + | chr8.1:63972549-63972568 | MS.gene063785:intron | 40.0% |
| AGAACATTCTACTGTGGTGG+AGG | - | chr8.1:63971304-63971323 | None:intergenic | 45.0% | |
| GCAATTCATTGATCCTCGAC+TGG | - | chr8.1:63971551-63971570 | None:intergenic | 45.0% | |
| GCAGAAGTAAGGTGGTGAAT+CGG | + | chr8.1:63971569-63971588 | MS.gene063785:intron | 45.0% | |
| GGGTGTTCGTGATTGACATT+TGG | + | chr8.1:63972582-63972601 | MS.gene063785:intron | 45.0% | |
| GGTAGAACGAAGCTGAGAAA+CGG | - | chr8.1:63969985-63970004 | None:intergenic | 45.0% | |
| GTGAGATTCACTGAGTTTGG+TGG | - | chr8.1:63969870-63969889 | None:intergenic | 45.0% | |
| GTTGGGTTTCTCAGTCTTTG+GGG | + | chr8.1:63972343-63972362 | MS.gene063785:intron | 45.0% | |
| TAGGGATCTGTGGATTCTGA+AGG | - | chr8.1:63971459-63971478 | None:intergenic | 45.0% | |
| TGAACAAAGTTCTCCAGTCG+AGG | + | chr8.1:63971535-63971554 | MS.gene063785:intron | 45.0% | |
| TGTGGATGGTGCGTAATAGT+TGG | + | chr8.1:63970698-63970717 | MS.gene063785:intron | 45.0% | |
| ! | GGTTTTGCACACACCTAACA+TGG | - | chr8.1:63972632-63972651 | None:intergenic | 45.0% |
| ! | GTGGATTCTGAAGGAAGTGA+TGG | - | chr8.1:63971450-63971469 | None:intergenic | 45.0% |
| ! | TATGGTGCCTCTGCTTTGAA+TGG | - | chr8.1:63973096-63973115 | None:intergenic | 45.0% |
| ACTCTTGCTGCTCTAGTCCA+CGG | - | chr8.1:63973144-63973163 | None:intergenic | 50.0% | |
| ATCGTCGGTCAGTACGTAGT+TGG | + | chr8.1:63973115-63973134 | MS.gene063785:CDS | 50.0% | |
| CATTGCCTGGGCCAAACATT+GGG | + | chr8.1:63972562-63972581 | MS.gene063785:intron | 50.0% | |
| GGATAAGTAAGGCCGTGAAG+CGG | - | chr8.1:63971249-63971268 | None:intergenic | 50.0% | |
| GGCAGAACATTCTACTGTGG+TGG | - | chr8.1:63971307-63971326 | None:intergenic | 50.0% | |
| GGCCTTACTTATCCAACTCG+TGG | + | chr8.1:63971255-63971274 | MS.gene063785:intron | 50.0% | |
| GGTGGCAGAACATTCTACTG+TGG | - | chr8.1:63971310-63971329 | None:intergenic | 50.0% | |
| GTAAGGTGGTGAATCGGTAG+AGG | + | chr8.1:63971575-63971594 | MS.gene063785:intron | 50.0% | |
| GTCGAAGGAATTTGCAGTGG+TGG | + | chr8.1:63971493-63971512 | MS.gene063785:intron | 50.0% | |
| GTGGTGAATCGGTAGAGGAA+GGG | + | chr8.1:63971580-63971599 | MS.gene063785:intron | 50.0% | |
| TATGGGACTAGGCTTGTGGA+TGG | + | chr8.1:63970684-63970703 | MS.gene063785:intron | 50.0% | |
| TCAGTTGAGGATCCACGAGT+TGG | - | chr8.1:63971270-63971289 | None:intergenic | 50.0% | |
| TGAATCGGTAGAGGAAGGGA+GGG | + | chr8.1:63971584-63971603 | MS.gene063785:intron | 50.0% | |
| ! | AGAGATGCCCTGCTCTTTTG+AGG | - | chr8.1:63973170-63973189 | None:intergenic | 50.0% |
| ! | AGAGTTGGCCTCAAAAGAGC+AGG | + | chr8.1:63973159-63973178 | MS.gene063785:CDS | 50.0% |
| ! | CTACGTACTGACCGACGATA+TGG | - | chr8.1:63973114-63973133 | None:intergenic | 50.0% |
| ! | GAGTTGGCCTCAAAAGAGCA+GGG | + | chr8.1:63973160-63973179 | MS.gene063785:CDS | 50.0% |
| ! | TGGACTAGAGCAGCAAGAGT+TGG | + | chr8.1:63973144-63973163 | MS.gene063785:CDS | 50.0% |
| ! | TGTCTGGTGTTTGTTGCCCA+CGG | + | chr8.1:63972748-63972767 | MS.gene063785:intron | 50.0% |
| !! | AAGCAGAGGCACCATATCGT+CGG | + | chr8.1:63973100-63973119 | MS.gene063785:CDS | 50.0% |
| CTCGGAGAAGAAGGAGCTTG+TGG | - | chr8.1:63971331-63971350 | None:intergenic | 55.0% | |
| GAACACCCAATGTTTGGCCC+AGG | - | chr8.1:63972570-63972589 | None:intergenic | 55.0% | |
| GCATTGCCTGGGCCAAACAT+TGG | + | chr8.1:63972561-63972580 | MS.gene063785:intron | 55.0% | |
| GGAGAAGAAGGAGCTTGTGG+TGG | - | chr8.1:63971328-63971347 | None:intergenic | 55.0% | |
| GGTGGTGAATCGGTAGAGGA+AGG | + | chr8.1:63971579-63971598 | MS.gene063785:intron | 55.0% | |
| GTGAATCGGTAGAGGAAGGG+AGG | + | chr8.1:63971583-63971602 | MS.gene063785:intron | 55.0% | |
| TAAGTAAGGCCGTGAAGCGG+TGG | - | chr8.1:63971246-63971265 | None:intergenic | 55.0% | |
| ! | GTCTGGTGTTTGTTGCCCAC+GGG | + | chr8.1:63972749-63972768 | MS.gene063785:intron | 55.0% |
| CTTGCTGCTCTAGTCCACGG+CGG | - | chr8.1:63973141-63973160 | None:intergenic | 60.0% | |
| TCGGTAGAGGAAGGGAGGGA+AGG | + | chr8.1:63971588-63971607 | MS.gene063785:intron | 60.0% | |
| TTTGCGGATCTCAGCGGCGA+TGG | - | chr8.1:63970006-63970025 | None:intergenic | 60.0% | |
| CAGTACGTAGTTGGCCGCCG+TGG | + | chr8.1:63973124-63973143 | MS.gene063785:CDS | 65.0% | |
| CTCCCTCCTCCACCGCTTCA+CGG | + | chr8.1:63971234-63971253 | MS.gene063785:intron | 65.0% | |
| GTAAGGCCGTGAAGCGGTGG+AGG | - | chr8.1:63971243-63971262 | None:intergenic | 65.0% | |
| AGGCCGTGAAGCGGTGGAGG+AGG | - | chr8.1:63971240-63971259 | None:intergenic | 70.0% | |
| CGTGAAGCGGTGGAGGAGGG+AGG | - | chr8.1:63971236-63971255 | None:intergenic | 70.0% | |
| GGCCGTGAAGCGGTGGAGGA+GGG | - | chr8.1:63971239-63971258 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 63969837 | 63973228 | 63969837 | ID=MS.gene063785 |
| chr8.1 | mRNA | 63969837 | 63973228 | 63969837 | ID=MS.gene063785.t1;Parent=MS.gene063785 |
| chr8.1 | exon | 63969837 | 63970049 | 63969837 | ID=MS.gene063785.t1.exon1;Parent=MS.gene063785.t1 |
| chr8.1 | CDS | 63969837 | 63970049 | 63969837 | ID=cds.MS.gene063785.t1;Parent=MS.gene063785.t1 |
| chr8.1 | exon | 63973040 | 63973228 | 63973040 | ID=MS.gene063785.t1.exon2;Parent=MS.gene063785.t1 |
| chr8.1 | CDS | 63973040 | 63973228 | 63973040 | ID=cds.MS.gene063785.t1;Parent=MS.gene063785.t1 |
| Gene Sequence |
| Protein sequence |
