Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063832.t1 | XP_024628675.1 | 95.9 | 412 | 16 | 1 | 1 | 412 | 1 | 411 | 4.00E-225 | 790.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063832.t1 | Q8L518 | 66.5 | 343 | 111 | 3 | 21 | 363 | 7 | 345 | 3.4e-132 | 473.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063832.t1 | G7LIC4 | 95.9 | 412 | 14 | 2 | 1 | 412 | 1 | 409 | 1.9e-224 | 787.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063832 | MS.gene019492 | PPI |
| MS.gene57514 | MS.gene063832 | PPI |
| MS.gene063832 | MS.gene067354 | PPI |
| MS.gene045848 | MS.gene063832 | PPI |
| MS.gene063832 | MS.gene50958 | PPI |
| MS.gene063832 | MS.gene83346 | PPI |
| MS.gene42220 | MS.gene063832 | PPI |
| MS.gene038844 | MS.gene063832 | PPI |
| MS.gene063832 | MS.gene27633 | PPI |
| MS.gene063832 | MS.gene52160 | PPI |
| MS.gene063832 | MS.gene58299 | PPI |
| MS.gene36871 | MS.gene063832 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063832.t1 | MTR_8g041330 | 95.874 | 412 | 14 | 2 | 1 | 412 | 1 | 409 | 0.0 | 810 |
| MS.gene063832.t1 | MTR_3g013430 | 71.501 | 393 | 106 | 3 | 19 | 411 | 113 | 499 | 0.0 | 575 |
| MS.gene063832.t1 | MTR_6g039820 | 61.300 | 323 | 124 | 1 | 36 | 357 | 16 | 338 | 4.57e-152 | 434 |
| MS.gene063832.t1 | MTR_1g097850 | 62.195 | 328 | 108 | 3 | 36 | 362 | 16 | 328 | 5.36e-151 | 431 |
| MS.gene063832.t1 | MTR_1g097850 | 61.290 | 248 | 81 | 2 | 36 | 282 | 16 | 249 | 1.50e-108 | 320 |
| MS.gene063832.t1 | MTR_6g040230 | 65.138 | 218 | 76 | 0 | 137 | 354 | 271 | 488 | 8.67e-104 | 316 |
| MS.gene063832.t1 | MTR_2g054370 | 35.110 | 319 | 192 | 6 | 41 | 353 | 48 | 357 | 1.83e-54 | 185 |
| MS.gene063832.t1 | MTR_8g041220 | 89.247 | 93 | 9 | 1 | 257 | 349 | 40 | 131 | 3.80e-53 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063832.t1 | AT1G74320 | 67.593 | 324 | 105 | 0 | 34 | 357 | 17 | 340 | 4.34e-171 | 483 |
| MS.gene063832.t1 | AT1G71697 | 61.656 | 326 | 122 | 3 | 35 | 358 | 16 | 340 | 3.11e-152 | 434 |
| MS.gene063832.t1 | AT4G09760 | 58.912 | 331 | 132 | 4 | 35 | 363 | 14 | 342 | 6.36e-148 | 424 |
| MS.gene063832.t1 | AT4G09760 | 58.912 | 331 | 132 | 4 | 35 | 363 | 14 | 342 | 6.36e-148 | 424 |
| MS.gene063832.t1 | AT4G09760 | 54.502 | 211 | 93 | 3 | 35 | 243 | 14 | 223 | 3.96e-80 | 248 |
| MS.gene063832.t1 | AT4G09760 | 53.061 | 196 | 89 | 3 | 35 | 228 | 14 | 208 | 3.35e-71 | 223 |
| MS.gene063832.t1 | AT2G26830 | 35.826 | 321 | 189 | 7 | 40 | 353 | 45 | 355 | 4.06e-55 | 187 |
Find 78 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCAACTTCCTGGAAAT+TGG | 0.159079 | 8.1:-63023315 | None:intergenic |
| TTGGAAGTTATTCCTCTTAA+AGG | 0.171522 | 8.1:+63020833 | MS.gene063832:CDS |
| TGAAATCATTAGCAAATAAA+TGG | 0.176333 | 8.1:+63020786 | MS.gene063832:CDS |
| ATCATGGAACTCCTTCATTT+TGG | 0.209327 | 8.1:-63021792 | None:intergenic |
| CACTTGCAAGTCATCTCTTA+TGG | 0.223466 | 8.1:+63022801 | MS.gene063832:CDS |
| GGACAAAGAAATCTCTCTTT+TGG | 0.232703 | 8.1:+63022048 | MS.gene063832:CDS |
| TTCCCAAAGGTACACATTCT+TGG | 0.254559 | 8.1:-63021831 | None:intergenic |
| GTCATCTCTTATGGGGCCTT+TGG | 0.259535 | 8.1:+63022810 | MS.gene063832:CDS |
| ATGAGGTATTCCAGATAAAA+TGG | 0.264675 | 8.1:+63020867 | MS.gene063832:CDS |
| TCATCTCTTATGGGGCCTTT+GGG | 0.283838 | 8.1:+63022811 | MS.gene063832:CDS |
| TGCCACAATGATTTACAATA+TGG | 0.290864 | 8.1:+63022109 | MS.gene063832:CDS |
| AAGGTTCTTGTTAGAATCTA+TGG | 0.326658 | 8.1:+63020917 | MS.gene063832:CDS |
| TGGAAGTTATTCCTCTTAAA+GGG | 0.343200 | 8.1:+63020834 | MS.gene063832:CDS |
| GGGCCTTTGGGGAATCGTTT+CGG | 0.345679 | 8.1:+63022823 | MS.gene063832:CDS |
| ATGAAACATCTCAACTTCTT+CGG | 0.351016 | 8.1:-63022014 | None:intergenic |
| AATAGATGGATCGCGCATAT+CGG | 0.365704 | 8.1:-63021753 | None:intergenic |
| GTTCCAAGAATGTGTACCTT+TGG | 0.367660 | 8.1:+63021828 | MS.gene063832:CDS |
| TGAAACATCTCAACTTCTTC+GGG | 0.370184 | 8.1:-63022013 | None:intergenic |
| ACTTGCAAGTCATCTCTTAT+GGG | 0.383444 | 8.1:+63022802 | MS.gene063832:CDS |
| CAGACATATTTGAGCTCATC+TGG | 0.386208 | 8.1:+63022508 | MS.gene063832:CDS |
| TGTACCTTTGGGAAAGATTA+CGG | 0.391573 | 8.1:+63021840 | MS.gene063832:CDS |
| TTCCAAGAATGTGTACCTTT+GGG | 0.404242 | 8.1:+63021829 | MS.gene063832:CDS |
| CAAAGAGCCCTCCAATTTCC+AGG | 0.404579 | 8.1:+63023304 | MS.gene063832:CDS |
| ATAGATGGATCGCGCATATC+GGG | 0.423467 | 8.1:-63021752 | None:intergenic |
| GTCAAGAATATGTGGAGTTT+CGG | 0.423578 | 8.1:-63022360 | None:intergenic |
| TTATCATGGAAAGATCCATT+AGG | 0.424776 | 8.1:-63023065 | None:intergenic |
| TTCCATGATCTTGACATGCC+TGG | 0.449549 | 8.1:+63021806 | MS.gene063832:CDS |
| TATCATGGAAAGATCCATTA+GGG | 0.450781 | 8.1:-63023064 | None:intergenic |
| TTTGCTATATCATATGCAAC+TGG | 0.459381 | 8.1:-63022305 | None:intergenic |
| GCTATAAGAGCAGAAATAGA+TGG | 0.462638 | 8.1:-63021767 | None:intergenic |
| AAATAAATGGGAAAATGTAT+TGG | 0.463368 | 8.1:+63020799 | MS.gene063832:CDS |
| TTGGTCATTGCCCCTTTAAG+AGG | 0.472910 | 8.1:-63020845 | None:intergenic |
| AGGGACCTCGTTTGCTAGGA+AGG | 0.472952 | 8.1:+63021011 | MS.gene063832:CDS |
| GAAATCATTAGCAAATAAAT+GGG | 0.476701 | 8.1:+63020787 | MS.gene063832:CDS |
| TTCGCATTCATCTCAAAGAA+TGG | 0.478784 | 8.1:+63020986 | MS.gene063832:CDS |
| GATAATGTTATTGTTATAGC+TGG | 0.484304 | 8.1:+63023083 | MS.gene063832:CDS |
| AAAGGTTTCAAGAGTACTAC+TGG | 0.489583 | 8.1:+63023018 | MS.gene063832:CDS |
| TTCAACTTCCTGGAAATTGG+AGG | 0.489748 | 8.1:-63023312 | None:intergenic |
| CGGTAACTCCTCAACGCATA+GGG | 0.494288 | 8.1:+63022083 | MS.gene063832:CDS |
| CTATAACAATAACATTATCA+TGG | 0.497894 | 8.1:-63023079 | None:intergenic |
| ACTTCTCTTGATAGATTTGG+CGG | 0.503129 | 8.1:+63022468 | MS.gene063832:intron |
| CTTGACTATAGTAAATATCC+TGG | 0.505967 | 8.1:+63022377 | MS.gene063832:CDS |
| CAAAATTGATTTCGACTACA+AGG | 0.518594 | 8.1:+63022983 | MS.gene063832:CDS |
| GGACAGGGACCTCGTTTGCT+AGG | 0.522828 | 8.1:+63021007 | MS.gene063832:CDS |
| TTACTATAGTCAAGAATATG+TGG | 0.524731 | 8.1:-63022368 | None:intergenic |
| ATTCATCTCAAAGAATGGAC+AGG | 0.529382 | 8.1:+63020991 | MS.gene063832:CDS |
| AGAAGGTGAAATGTCAAGAA+AGG | 0.537124 | 8.1:+63020898 | MS.gene063832:CDS |
| TCAACTTCCTGGAAATTGGA+GGG | 0.539257 | 8.1:-63023311 | None:intergenic |
| TTCAAGAGTACTACTGGTCA+AGG | 0.540134 | 8.1:+63023024 | MS.gene063832:CDS |
| AACCAGGCATGTCAAGATCA+TGG | 0.540337 | 8.1:-63021808 | None:intergenic |
| CATCTCTTATGGGGCCTTTG+GGG | 0.546550 | 8.1:+63022812 | MS.gene063832:CDS |
| TTGCAGCCATCTCAGAGAAG+TGG | 0.546892 | 8.1:-63022328 | None:intergenic |
| TCGGTAACTCCTCAACGCAT+AGG | 0.548774 | 8.1:+63022082 | MS.gene063832:CDS |
| CTTGTTAGAATCTATGGTGA+AGG | 0.550047 | 8.1:+63020923 | MS.gene063832:CDS |
| TCTTATAGCCTCCAAAATGA+AGG | 0.550643 | 8.1:+63021781 | MS.gene063832:CDS |
| AGCAAACCACTTCTCTGAGA+TGG | 0.561547 | 8.1:+63022322 | MS.gene063832:CDS |
| TGCTGCACTTCATTATCACT+AGG | 0.567718 | 8.1:-63022752 | None:intergenic |
| TGTATTGGATGCAAATGCGT+TGG | 0.569064 | 8.1:+63020814 | MS.gene063832:CDS |
| TTGCTAGGAAGGTTTGCTCA+AGG | 0.570025 | 8.1:+63021022 | MS.gene063832:CDS |
| GATGTTTCATTTGAACACAA+TGG | 0.571971 | 8.1:+63022027 | MS.gene063832:CDS |
| GACATTGGCTTATTGAAGCG+AGG | 0.572887 | 8.1:+63021978 | MS.gene063832:intron |
| TTGAAGAGTTCATCCGCGCA+AGG | 0.573491 | 8.1:+63021050 | MS.gene063832:CDS |
| AGGTACACATTCTTGGAACC+AGG | 0.595752 | 8.1:-63021824 | None:intergenic |
| ATAAAATGGAAAACAACAGA+AGG | 0.603660 | 8.1:+63020881 | MS.gene063832:CDS |
| TACCATATTGTAAATCATTG+TGG | 0.610437 | 8.1:-63022111 | None:intergenic |
| GGAAGTTATTCCTCTTAAAG+GGG | 0.616043 | 8.1:+63020835 | MS.gene063832:CDS |
| TGAAGAGTTCATCCGCGCAA+GGG | 0.628101 | 8.1:+63021051 | MS.gene063832:CDS |
| TGGCAAAACCCTATGCGTTG+AGG | 0.633836 | 8.1:-63022091 | None:intergenic |
| TTCATCTCAAAGAATGGACA+GGG | 0.638399 | 8.1:+63020992 | MS.gene063832:CDS |
| AACATCTCAACTTCTTCGGG+TGG | 0.639965 | 8.1:-63022010 | None:intergenic |
| CTTGCAAGTCATCTCTTATG+GGG | 0.644065 | 8.1:+63022803 | MS.gene063832:CDS |
| ACAAGGAGTATGCAAAACAA+AGG | 0.657049 | 8.1:+63023000 | MS.gene063832:CDS |
| TAAAGGGGCAATGACCAATG+AGG | 0.662217 | 8.1:+63020850 | MS.gene063832:CDS |
| ATACCGAAACGATTCCCCAA+AGG | 0.667454 | 8.1:-63022826 | None:intergenic |
| AAGACAATACTACCCTTGCG+CGG | 0.689959 | 8.1:-63021063 | None:intergenic |
| CATACCGTAATCTTTCCCAA+AGG | 0.702589 | 8.1:-63021844 | None:intergenic |
| GCAAACCTTCCTAGCAAACG+AGG | 0.716835 | 8.1:-63021016 | None:intergenic |
| AGTGCAGCAACTACTTGATG+AGG | 0.722704 | 8.1:+63022766 | MS.gene063832:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATGTATGTTAAATAAA+AGG | - | chr8.1:63022583-63022602 | None:intergenic | 10.0% |
| !!! | TATTAAAATTTTACTTTGAA+AGG | + | chr8.1:63021548-63021567 | MS.gene063832:intron | 10.0% |
| !!! | TTTCAAAGTAAAATTTTAAT+AGG | - | chr8.1:63021549-63021568 | None:intergenic | 10.0% |
| !! | AATTATGTATATGAATGTTA+GGG | + | chr8.1:63023185-63023204 | MS.gene063832:intron | 15.0% |
| !!! | AATATTGTTATTGTTAGATT+TGG | + | chr8.1:63021136-63021155 | MS.gene063832:intron | 15.0% |
| !!! | AGTAAAATTTTAATAGGTTA+CGG | - | chr8.1:63021543-63021562 | None:intergenic | 15.0% |
| !!! | AGTACATTTTTAAAGTTTTA+AGG | - | chr8.1:63021450-63021469 | None:intergenic | 15.0% |
| !!! | TAACATACATAAATCTTTTA+TGG | + | chr8.1:63022589-63022608 | MS.gene063832:intron | 15.0% |
| !! | AAATAAATGGGAAAATGTAT+TGG | + | chr8.1:63020799-63020818 | MS.gene063832:CDS | 20.0% |
| !! | AAATGGAACAATAAAATACA+TGG | + | chr8.1:63022630-63022649 | MS.gene063832:intron | 20.0% |
| !! | AACAATAACAATATTCTCAA+AGG | - | chr8.1:63021131-63021150 | None:intergenic | 20.0% |
| !! | AGGAATTAATATGATGTAAA+TGG | - | chr8.1:63023224-63023243 | None:intergenic | 20.0% |
| !! | CAATTATGTATATGAATGTT+AGG | + | chr8.1:63023184-63023203 | MS.gene063832:intron | 20.0% |
| !! | CTATAACAATAACATTATCA+TGG | - | chr8.1:63023082-63023101 | None:intergenic | 20.0% |
| !! | GAAATCATTAGCAAATAAAT+GGG | + | chr8.1:63020787-63020806 | MS.gene063832:CDS | 20.0% |
| !! | TAAAAAGAGAAAGTTTATCT+TGG | + | chr8.1:63021407-63021426 | MS.gene063832:intron | 20.0% |
| !! | TGAAATCATTAGCAAATAAA+TGG | + | chr8.1:63020786-63020805 | MS.gene063832:CDS | 20.0% |
| !! | TTCTAAATCATGTTTAGTAA+AGG | - | chr8.1:63021242-63021261 | None:intergenic | 20.0% |
| !!! | AACTTTTTGTTTTTCAGAAA+TGG | + | chr8.1:63022613-63022632 | MS.gene063832:intron | 20.0% |
| !!! | AAGTATAAAATTAACTTGCA+GGG | + | chr8.1:63023244-63023263 | MS.gene063832:intron | 20.0% |
| !!! | AATGATGATGAGAAATTTTA+CGG | - | chr8.1:63022407-63022426 | None:intergenic | 20.0% |
| !!! | ACATAATTGACATATTTTGT+TGG | - | chr8.1:63023173-63023192 | None:intergenic | 20.0% |
| !!! | ATCTATGCAAAGTTTTATTT+TGG | - | chr8.1:63021216-63021235 | None:intergenic | 20.0% |
| !!! | TAAGTATAAAATTAACTTGC+AGG | + | chr8.1:63023243-63023262 | MS.gene063832:intron | 20.0% |
| !!! | TGCAAGTTAATTTTATACTT+AGG | - | chr8.1:63023244-63023263 | None:intergenic | 20.0% |
| !!! | TTAAAATGTACTTTTGTAAC+AGG | + | chr8.1:63022259-63022278 | MS.gene063832:intron | 20.0% |
| ! | AAAAAATTTCTTCAACTTCC+TGG | - | chr8.1:63023325-63023344 | None:intergenic | 25.0% |
| ! | ATAAAATGGAAAACAACAGA+AGG | + | chr8.1:63020881-63020900 | MS.gene063832:CDS | 25.0% |
| ! | GATAATGTTATTGTTATAGC+TGG | + | chr8.1:63023083-63023102 | MS.gene063832:CDS | 25.0% |
| ! | GCATAAAAGTAATTCTTGAA+TGG | - | chr8.1:63022444-63022463 | None:intergenic | 25.0% |
| ! | GTGTAACACAATCTTTAATA+TGG | - | chr8.1:63022550-63022569 | None:intergenic | 25.0% |
| ! | TACCATATTGTAAATCATTG+TGG | - | chr8.1:63022114-63022133 | None:intergenic | 25.0% |
| ! | TATGTTAATGATTCAGACAT+TGG | + | chr8.1:63021963-63021982 | MS.gene063832:intron | 25.0% |
| ! | TGTTCTCATAATGCAATTAT+TGG | + | chr8.1:63022709-63022728 | MS.gene063832:intron | 25.0% |
| ! | TTACTATAGTCAAGAATATG+TGG | - | chr8.1:63022371-63022390 | None:intergenic | 25.0% |
| ! | TTGTTTAGATAAGACAATAG+AGG | - | chr8.1:63022931-63022950 | None:intergenic | 25.0% |
| !! | AAATGTTAGCAATTGCTATT+AGG | + | chr8.1:63021368-63021387 | MS.gene063832:intron | 25.0% |
| !! | AATGTTAGCAATTGCTATTA+GGG | + | chr8.1:63021369-63021388 | MS.gene063832:intron | 25.0% |
| !! | ATTATTGTTATTGTCAGACT+TGG | + | chr8.1:63021162-63021181 | MS.gene063832:intron | 25.0% |
| !! | TACTGACATTTTCTTTGATA+GGG | + | chr8.1:63020946-63020965 | MS.gene063832:CDS | 25.0% |
| !!! | AGGAAGTTGAAGAAATTTTT+TGG | + | chr8.1:63023324-63023343 | MS.gene063832:CDS | 25.0% |
| !!! | AGTATAAAATTAACTTGCAG+GGG | + | chr8.1:63023245-63023264 | MS.gene063832:intron | 25.0% |
| !!! | TGGTTGATGAATTGAAATTT+AGG | + | chr8.1:63021182-63021201 | MS.gene063832:intron | 25.0% |
| !!! | TTGAAGAAATTTTTTGGTCT+TGG | + | chr8.1:63023330-63023349 | MS.gene063832:CDS | 25.0% |
| AAGATTGTGTTACACTTACA+TGG | + | chr8.1:63022555-63022574 | MS.gene063832:intron | 30.0% | |
| AAGGTTCTTGTTAGAATCTA+TGG | + | chr8.1:63020917-63020936 | MS.gene063832:CDS | 30.0% | |
| ATCTCACATTTCTTGTTAAG+CGG | - | chr8.1:63021886-63021905 | None:intergenic | 30.0% | |
| ATCTTCACAATACTTTGTTC+AGG | + | chr8.1:63022950-63022969 | MS.gene063832:intron | 30.0% | |
| ATGAAACATCTCAACTTCTT+CGG | - | chr8.1:63022017-63022036 | None:intergenic | 30.0% | |
| CCTATGTTCAAAATATGTGA+AGG | - | chr8.1:63022892-63022911 | None:intergenic | 30.0% | |
| CTTGACTATAGTAAATATCC+TGG | + | chr8.1:63022377-63022396 | MS.gene063832:CDS | 30.0% | |
| GATGTTTCATTTGAACACAA+TGG | + | chr8.1:63022027-63022046 | MS.gene063832:CDS | 30.0% | |
| GTAATGGTAAATAAGTGCAT+TGG | + | chr8.1:63023105-63023124 | MS.gene063832:intron | 30.0% | |
| GTTATTGTTATAGCTGGTAA+TGG | + | chr8.1:63023089-63023108 | MS.gene063832:intron | 30.0% | |
| TATCATGGAAAGATCCATTA+GGG | - | chr8.1:63023067-63023086 | None:intergenic | 30.0% | |
| TCTACTTCTCTTGATAGATT+TGG | + | chr8.1:63022465-63022484 | MS.gene063832:intron | 30.0% | |
| TGCCACAATGATTTACAATA+TGG | + | chr8.1:63022109-63022128 | MS.gene063832:CDS | 30.0% | |
| TGGAAGTTATTCCTCTTAAA+GGG | + | chr8.1:63020834-63020853 | MS.gene063832:CDS | 30.0% | |
| TTATCATGGAAAGATCCATT+AGG | - | chr8.1:63023068-63023087 | None:intergenic | 30.0% | |
| TTCTTGAATGGATACAACAA+AGG | - | chr8.1:63022432-63022451 | None:intergenic | 30.0% | |
| TTGGAAGTTATTCCTCTTAA+AGG | + | chr8.1:63020833-63020852 | MS.gene063832:CDS | 30.0% | |
| ! | AAATAAGTGCATTGGTACAA+TGG | + | chr8.1:63023113-63023132 | MS.gene063832:intron | 30.0% |
| ! | AATATCTCTTTTGCTTCATC+TGG | - | chr8.1:63020767-63020786 | None:intergenic | 30.0% |
| ! | ACTATTTTATAATTGCCCTC+GGG | + | chr8.1:63021336-63021355 | MS.gene063832:intron | 30.0% |
| ! | ATGAGGTATTCCAGATAAAA+TGG | + | chr8.1:63020867-63020886 | MS.gene063832:CDS | 30.0% |
| ! | CAAAATTGATTTCGACTACA+AGG | + | chr8.1:63022983-63023002 | MS.gene063832:CDS | 30.0% |
| ! | GACTATTTTATAATTGCCCT+CGG | + | chr8.1:63021335-63021354 | MS.gene063832:intron | 30.0% |
| ! | TTTGCTATATCATATGCAAC+TGG | - | chr8.1:63022308-63022327 | None:intergenic | 30.0% |
| !! | AGAAATCTCTCTTTTGGAAA+AGG | + | chr8.1:63022054-63022073 | MS.gene063832:CDS | 30.0% |
| !! | CCTTCACATATTTTGAACAT+AGG | + | chr8.1:63022889-63022908 | MS.gene063832:intron | 30.0% |
| !! | GTACTGACATTTTCTTTGAT+AGG | + | chr8.1:63020945-63020964 | MS.gene063832:CDS | 30.0% |
| !! | TCTTTTGGAAAAGGAATTGT+CGG | + | chr8.1:63022063-63022082 | MS.gene063832:CDS | 30.0% |
| !! | TTTTATCTGGAATACCTCAT+TGG | - | chr8.1:63020867-63020886 | None:intergenic | 30.0% |
| !!! | CAATTATTGGTTTTGAACTC+AGG | + | chr8.1:63022722-63022741 | MS.gene063832:intron | 30.0% |
| !!! | CTGTTGTTTTCCATTTTATC+TGG | - | chr8.1:63020880-63020899 | None:intergenic | 30.0% |
| ACTTCTCTTGATAGATTTGG+CGG | + | chr8.1:63022468-63022487 | MS.gene063832:intron | 35.0% | |
| ACTTGCAAGTCATCTCTTAT+GGG | + | chr8.1:63022802-63022821 | MS.gene063832:CDS | 35.0% | |
| AGAAGGTGAAATGTCAAGAA+AGG | + | chr8.1:63020898-63020917 | MS.gene063832:CDS | 35.0% | |
| ATTCATCTCAAAGAATGGAC+AGG | + | chr8.1:63020991-63021010 | MS.gene063832:CDS | 35.0% | |
| CTTGTTAGAATCTATGGTGA+AGG | + | chr8.1:63020923-63020942 | MS.gene063832:CDS | 35.0% | |
| GCTATAAGAGCAGAAATAGA+TGG | - | chr8.1:63021770-63021789 | None:intergenic | 35.0% | |
| GGAAGTTATTCCTCTTAAAG+GGG | + | chr8.1:63020835-63020854 | MS.gene063832:CDS | 35.0% | |
| GTCAAGAATATGTGGAGTTT+CGG | - | chr8.1:63022363-63022382 | None:intergenic | 35.0% | |
| TCTTATAGCCTCCAAAATGA+AGG | + | chr8.1:63021781-63021800 | MS.gene063832:CDS | 35.0% | |
| TGAAACATCTCAACTTCTTC+GGG | - | chr8.1:63022016-63022035 | None:intergenic | 35.0% | |
| TTCATCTCAAAGAATGGACA+GGG | + | chr8.1:63020992-63021011 | MS.gene063832:CDS | 35.0% | |
| TTCCAAGAATGTGTACCTTT+GGG | + | chr8.1:63021829-63021848 | MS.gene063832:CDS | 35.0% | |
| TTCGCATTCATCTCAAAGAA+TGG | + | chr8.1:63020986-63021005 | MS.gene063832:CDS | 35.0% | |
| TTCTTCAACTTCCTGGAAAT+TGG | - | chr8.1:63023318-63023337 | None:intergenic | 35.0% | |
| ! | AATCATCTTTTCAGCCCTAA+TGG | + | chr8.1:63023050-63023069 | MS.gene063832:CDS | 35.0% |
| ! | ACAAGGAGTATGCAAAACAA+AGG | + | chr8.1:63023000-63023019 | MS.gene063832:CDS | 35.0% |
| ! | ATCATGGAACTCCTTCATTT+TGG | - | chr8.1:63021795-63021814 | None:intergenic | 35.0% |
| ! | GGACAAAGAAATCTCTCTTT+TGG | + | chr8.1:63022048-63022067 | MS.gene063832:CDS | 35.0% |
| ! | TGTACCTTTGGGAAAGATTA+CGG | + | chr8.1:63021840-63021859 | MS.gene063832:CDS | 35.0% |
| !! | AAAGGTTTCAAGAGTACTAC+TGG | + | chr8.1:63023018-63023037 | MS.gene063832:CDS | 35.0% |
| !! | ATAAAATTAACTTGCAGGGG+AGG | + | chr8.1:63023248-63023267 | MS.gene063832:intron | 35.0% |
| AATAGATGGATCGCGCATAT+CGG | - | chr8.1:63021756-63021775 | None:intergenic | 40.0% | |
| ATAATTGCCCTCGGGAAAAT+TGG | + | chr8.1:63021344-63021363 | MS.gene063832:intron | 40.0% | |
| CACTTGCAAGTCATCTCTTA+TGG | + | chr8.1:63022801-63022820 | MS.gene063832:CDS | 40.0% | |
| CAGACATATTTGAGCTCATC+TGG | + | chr8.1:63022508-63022527 | MS.gene063832:CDS | 40.0% | |
| CATACCGTAATCTTTCCCAA+AGG | - | chr8.1:63021847-63021866 | None:intergenic | 40.0% | |
| CGTTCTTAACTAATGCCGTA+AGG | + | chr8.1:63021507-63021526 | MS.gene063832:intron | 40.0% | |
| CTTGCAAGTCATCTCTTATG+GGG | + | chr8.1:63022803-63022822 | MS.gene063832:CDS | 40.0% | |
| GTTCCAAGAATGTGTACCTT+TGG | + | chr8.1:63021828-63021847 | MS.gene063832:CDS | 40.0% | |
| TAATTGCCCTCGGGAAAATT+GGG | + | chr8.1:63021345-63021364 | MS.gene063832:intron | 40.0% | |
| TACGGTAACAAGTGTCCTTA+CGG | - | chr8.1:63021525-63021544 | None:intergenic | 40.0% | |
| TCAACTTCCTGGAAATTGGA+GGG | - | chr8.1:63023314-63023333 | None:intergenic | 40.0% | |
| TGCTGCACTTCATTATCACT+AGG | - | chr8.1:63022755-63022774 | None:intergenic | 40.0% | |
| TGTATTGGATGCAAATGCGT+TGG | + | chr8.1:63020814-63020833 | MS.gene063832:CDS | 40.0% | |
| TTCAACTTCCTGGAAATTGG+AGG | - | chr8.1:63023315-63023334 | None:intergenic | 40.0% | |
| ! | AACATTTCCCAATTTTCCCG+AGG | - | chr8.1:63021355-63021374 | None:intergenic | 40.0% |
| ! | ACATTTCCCAATTTTCCCGA+GGG | - | chr8.1:63021354-63021373 | None:intergenic | 40.0% |
| ! | ATGGAACTCCTTCATTTTGG+AGG | - | chr8.1:63021792-63021811 | None:intergenic | 40.0% |
| ! | GAGAAATTTTACGGCATACC+AGG | - | chr8.1:63022398-63022417 | None:intergenic | 40.0% |
| ! | TTCCCAAAGGTACACATTCT+TGG | - | chr8.1:63021834-63021853 | None:intergenic | 40.0% |
| !! | TTCAAGAGTACTACTGGTCA+AGG | + | chr8.1:63023024-63023043 | MS.gene063832:CDS | 40.0% |
| AACATCTCAACTTCTTCGGG+TGG | - | chr8.1:63022013-63022032 | None:intergenic | 45.0% | |
| AACCAGGCATGTCAAGATCA+TGG | - | chr8.1:63021811-63021830 | None:intergenic | 45.0% | |
| AAGACAATACTACCCTTGCG+CGG | - | chr8.1:63021066-63021085 | None:intergenic | 45.0% | |
| AGGTACACATTCTTGGAACC+AGG | - | chr8.1:63021827-63021846 | None:intergenic | 45.0% | |
| AGTGCAGCAACTACTTGATG+AGG | + | chr8.1:63022766-63022785 | MS.gene063832:CDS | 45.0% | |
| ATACCGAAACGATTCCCCAA+AGG | - | chr8.1:63022829-63022848 | None:intergenic | 45.0% | |
| ATAGATGGATCGCGCATATC+GGG | - | chr8.1:63021755-63021774 | None:intergenic | 45.0% | |
| TAAAGGGGCAATGACCAATG+AGG | + | chr8.1:63020850-63020869 | MS.gene063832:CDS | 45.0% | |
| TCATCTCTTATGGGGCCTTT+GGG | + | chr8.1:63022811-63022830 | MS.gene063832:CDS | 45.0% | |
| TTCCATGATCTTGACATGCC+TGG | + | chr8.1:63021806-63021825 | MS.gene063832:CDS | 45.0% | |
| TTGGTCATTGCCCCTTTAAG+AGG | - | chr8.1:63020848-63020867 | None:intergenic | 45.0% | |
| ! | AGCAAACCACTTCTCTGAGA+TGG | + | chr8.1:63022322-63022341 | MS.gene063832:CDS | 45.0% |
| ! | TTGCTAGGAAGGTTTGCTCA+AGG | + | chr8.1:63021022-63021041 | MS.gene063832:CDS | 45.0% |
| !! | GACATTGGCTTATTGAAGCG+AGG | + | chr8.1:63021978-63021997 | MS.gene063832:intron | 45.0% |
| CAAAGAGCCCTCCAATTTCC+AGG | + | chr8.1:63023304-63023323 | MS.gene063832:CDS | 50.0% | |
| CATCTCTTATGGGGCCTTTG+GGG | + | chr8.1:63022812-63022831 | MS.gene063832:CDS | 50.0% | |
| CGGTAACTCCTCAACGCATA+GGG | + | chr8.1:63022083-63022102 | MS.gene063832:CDS | 50.0% | |
| GCAAACCTTCCTAGCAAACG+AGG | - | chr8.1:63021019-63021038 | None:intergenic | 50.0% | |
| GTCATCTCTTATGGGGCCTT+TGG | + | chr8.1:63022810-63022829 | MS.gene063832:CDS | 50.0% | |
| TCGGTAACTCCTCAACGCAT+AGG | + | chr8.1:63022082-63022101 | MS.gene063832:CDS | 50.0% | |
| TGAAGAGTTCATCCGCGCAA+GGG | + | chr8.1:63021051-63021070 | MS.gene063832:CDS | 50.0% | |
| TGGCAAAACCCTATGCGTTG+AGG | - | chr8.1:63022094-63022113 | None:intergenic | 50.0% | |
| TTGAAGAGTTCATCCGCGCA+AGG | + | chr8.1:63021050-63021069 | MS.gene063832:CDS | 50.0% | |
| TTGCAGCCATCTCAGAGAAG+TGG | - | chr8.1:63022331-63022350 | None:intergenic | 50.0% | |
| ! | AGGGACCTCGTTTGCTAGGA+AGG | + | chr8.1:63021011-63021030 | MS.gene063832:CDS | 55.0% |
| ! | GGGCCTTTGGGGAATCGTTT+CGG | + | chr8.1:63022823-63022842 | MS.gene063832:CDS | 55.0% |
| GGACAGGGACCTCGTTTGCT+AGG | + | chr8.1:63021007-63021026 | MS.gene063832:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 63020662 | 63023374 | 63020662 | ID=MS.gene063832 |
| chr8.1 | mRNA | 63020662 | 63023374 | 63020662 | ID=MS.gene063832.t1;Parent=MS.gene063832 |
| chr8.1 | exon | 63020662 | 63021072 | 63020662 | ID=MS.gene063832.t1.exon1;Parent=MS.gene063832.t1 |
| chr8.1 | CDS | 63020662 | 63021072 | 63020662 | ID=cds.MS.gene063832.t1;Parent=MS.gene063832.t1 |
| chr8.1 | exon | 63021740 | 63021861 | 63021740 | ID=MS.gene063832.t1.exon2;Parent=MS.gene063832.t1 |
| chr8.1 | CDS | 63021740 | 63021861 | 63021740 | ID=cds.MS.gene063832.t1;Parent=MS.gene063832.t1 |
| chr8.1 | exon | 63021979 | 63022174 | 63021979 | ID=MS.gene063832.t1.exon3;Parent=MS.gene063832.t1 |
| chr8.1 | CDS | 63021979 | 63022174 | 63021979 | ID=cds.MS.gene063832.t1;Parent=MS.gene063832.t1 |
| chr8.1 | exon | 63022281 | 63022398 | 63022281 | ID=MS.gene063832.t1.exon4;Parent=MS.gene063832.t1 |
| chr8.1 | CDS | 63022281 | 63022398 | 63022281 | ID=cds.MS.gene063832.t1;Parent=MS.gene063832.t1 |
| chr8.1 | exon | 63022482 | 63022529 | 63022482 | ID=MS.gene063832.t1.exon5;Parent=MS.gene063832.t1 |
| chr8.1 | CDS | 63022482 | 63022529 | 63022482 | ID=cds.MS.gene063832.t1;Parent=MS.gene063832.t1 |
| chr8.1 | exon | 63022744 | 63022844 | 63022744 | ID=MS.gene063832.t1.exon6;Parent=MS.gene063832.t1 |
| chr8.1 | CDS | 63022744 | 63022844 | 63022744 | ID=cds.MS.gene063832.t1;Parent=MS.gene063832.t1 |
| chr8.1 | exon | 63022972 | 63023104 | 63022972 | ID=MS.gene063832.t1.exon7;Parent=MS.gene063832.t1 |
| chr8.1 | CDS | 63022972 | 63023104 | 63022972 | ID=cds.MS.gene063832.t1;Parent=MS.gene063832.t1 |
| chr8.1 | exon | 63023265 | 63023374 | 63023265 | ID=MS.gene063832.t1.exon8;Parent=MS.gene063832.t1 |
| chr8.1 | CDS | 63023265 | 63023374 | 63023265 | ID=cds.MS.gene063832.t1;Parent=MS.gene063832.t1 |
| Gene Sequence |
| Protein sequence |
