AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064518

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064518.t1 MTR_5g078210 95.562 338 11 1 37 370 16 353 0.0 661
MS.gene064518.t1 MTR_5g078210 94.424 269 11 1 37 301 16 284 0.0 517
MS.gene064518.t1 MTR_3g435540 46.064 343 169 4 43 369 20 362 3.11e-105 314
MS.gene064518.t1 MTR_4g108690 47.634 317 160 3 43 353 24 340 2.29e-101 304
MS.gene064518.t1 MTR_3g005650 44.089 313 166 5 48 355 32 340 4.13e-85 262
MS.gene064518.t1 MTR_4g122200 43.161 329 171 7 48 366 37 359 1.43e-82 256
MS.gene064518.t1 MTR_8g087890 43.260 319 166 10 48 356 33 346 3.20e-81 253
MS.gene064518.t1 MTR_2g033920 41.641 329 178 7 38 355 26 351 2.18e-80 250
MS.gene064518.t1 MTR_7g116500 40.446 314 179 5 48 354 35 347 2.50e-80 250
MS.gene064518.t1 MTR_2g033930 41.379 319 176 5 44 354 30 345 2.43e-79 248
MS.gene064518.t1 MTR_8g079050 38.753 369 199 10 1 355 4 359 2.70e-78 245
MS.gene064518.t1 MTR_4g035353 39.297 313 180 6 48 352 33 343 4.41e-78 244
MS.gene064518.t1 MTR_3g024510 40.063 317 179 7 48 356 40 353 4.51e-78 244
MS.gene064518.t1 MTR_7g116520 39.252 321 187 5 42 355 30 349 3.35e-76 240
MS.gene064518.t1 MTR_4g019880 39.748 317 181 6 48 355 34 349 8.21e-76 239
MS.gene064518.t1 MTR_0565s0010 39.233 339 189 12 39 366 24 356 1.77e-75 238
MS.gene064518.t1 MTR_7g116570 39.048 315 184 5 48 355 36 349 8.96e-75 236
MS.gene064518.t1 MTR_1g079540 38.217 314 186 5 48 354 33 345 1.84e-73 233
MS.gene064518.t1 MTR_7g116510 36.932 352 198 6 11 354 5 340 9.11e-73 231
MS.gene064518.t1 MTR_1g069175 39.319 323 186 7 42 355 29 350 1.27e-71 228
MS.gene064518.t1 MTR_1g024890 35.493 355 211 7 8 355 4 347 8.32e-71 226
MS.gene064518.t1 MTR_6g021530 39.048 315 183 6 49 355 32 345 1.13e-70 225
MS.gene064518.t1 MTR_7g008060 34.857 350 201 7 9 355 10 335 1.69e-67 217
MS.gene064518.t1 MTR_3g098270 37.931 319 185 7 48 355 36 352 2.08e-67 218
MS.gene064518.t1 MTR_3g052490 35.843 332 194 6 48 368 34 357 1.46e-66 215
MS.gene064518.t1 MTR_5g093090 35.780 327 194 6 47 360 29 352 5.32e-66 213
MS.gene064518.t1 MTR_3g052580 33.634 333 201 7 47 368 29 352 4.02e-65 212
MS.gene064518.t1 MTR_3g005660 39.697 330 178 12 48 362 38 361 4.86e-65 211
MS.gene064518.t1 MTR_3g052580 33.634 333 201 7 47 368 28 351 5.55e-65 212
MS.gene064518.t1 MTR_1g079530 37.805 328 186 9 37 355 20 338 1.63e-64 209
MS.gene064518.t1 MTR_2g017875 39.752 322 173 10 48 359 36 346 1.96e-64 209
MS.gene064518.t1 MTR_3g052480 36.000 325 183 8 48 355 35 351 2.75e-64 209
MS.gene064518.t1 MTR_5g009100 35.556 315 195 4 48 355 48 361 3.05e-63 207
MS.gene064518.t1 MTR_5g084750 37.072 321 190 8 49 360 33 350 1.01e-62 204
MS.gene064518.t1 MTR_5g084790 36.218 312 187 8 49 351 35 343 1.92e-62 204
MS.gene064518.t1 MTR_8g074570 36.420 324 182 10 48 355 40 355 5.07e-60 198
MS.gene064518.t1 MTR_3g023220 38.730 315 174 9 48 356 35 336 7.23e-60 197
MS.gene064518.t1 MTR_3g082830 35.370 311 189 7 49 350 41 348 8.87e-59 194
MS.gene064518.t1 MTR_3g464730 35.048 311 191 7 49 350 31 339 2.18e-57 191
MS.gene064518.t1 MTR_2g017955 38.365 318 177 11 48 356 35 342 2.46e-57 191
MS.gene064518.t1 MTR_5g084770 33.241 361 211 10 10 360 9 349 5.11e-57 189
MS.gene064518.t1 MTR_2g033920 40.293 273 151 6 38 301 26 295 5.41e-57 188
MS.gene064518.t1 MTR_2g084585 35.826 321 188 10 48 356 32 346 1.69e-56 188
MS.gene064518.t1 MTR_5g022630 37.101 345 193 12 24 354 25 359 1.10e-55 187
MS.gene064518.t1 MTR_1g025720 33.714 350 216 8 9 350 5 346 1.56e-55 186
MS.gene064518.t1 MTR_1g025760 33.621 348 206 10 8 344 51 384 3.48e-55 186
MS.gene064518.t1 MTR_2g017965 37.304 319 180 10 48 356 35 343 6.76e-55 185
MS.gene064518.t1 MTR_2g017925 38.679 318 172 12 48 356 35 338 3.08e-54 183
MS.gene064518.t1 MTR_8g074560 31.680 363 220 7 1 351 1 347 3.78e-54 182
MS.gene064518.t1 MTR_3g114090 34.853 307 190 6 47 345 37 341 2.78e-53 180
MS.gene064518.t1 MTR_1g025780 33.432 338 206 10 17 345 17 344 3.97e-52 177
MS.gene064518.t1 MTR_8g087870 35.347 331 182 12 48 369 31 338 4.12e-52 177
MS.gene064518.t1 MTR_8g014910 35.759 316 186 10 50 353 36 346 6.53e-52 176
MS.gene064518.t1 MTR_2g100620 35.110 319 188 10 45 351 32 343 2.20e-51 175
MS.gene064518.t1 MTR_5g022640 37.380 313 181 10 49 350 46 354 1.14e-50 173
MS.gene064518.t1 MTR_8g075200 34.076 314 191 10 50 352 45 353 1.42e-50 174
MS.gene064518.t1 MTR_3g114120 34.091 308 184 9 50 345 51 351 1.62e-50 173
MS.gene064518.t1 MTR_8g075220 33.333 318 193 10 50 352 44 357 3.07e-50 172
MS.gene064518.t1 MTR_1g025680 33.876 307 189 7 49 345 37 339 1.03e-49 173
MS.gene064518.t1 MTR_2g017915 36.760 321 159 12 47 356 34 321 1.96e-49 170
MS.gene064518.t1 MTR_5g074270 31.429 350 218 10 13 351 8 346 1.98e-49 170
MS.gene064518.t1 MTR_8g075230 33.758 314 194 9 47 350 37 346 2.47e-49 170
MS.gene064518.t1 MTR_0009s0250 33.846 325 194 10 48 364 35 346 3.52e-49 169
MS.gene064518.t1 MTR_1g025700 31.503 346 217 9 8 345 21 354 1.82e-48 168
MS.gene064518.t1 MTR_3g021460 33.611 360 195 14 9 355 6 334 8.04e-48 166
MS.gene064518.t1 MTR_2g044100 33.333 333 192 11 48 363 45 364 2.46e-47 166
MS.gene064518.t1 MTR_5g093090 34.717 265 160 4 47 301 29 290 3.90e-47 162
MS.gene064518.t1 MTR_4g056160 31.988 322 200 9 48 355 29 345 1.25e-46 162
MS.gene064518.t1 MTR_2g461580 31.492 362 214 11 9 362 6 341 8.46e-46 160
MS.gene064518.t1 MTR_0127s0040 34.956 226 143 4 141 362 4 229 2.25e-45 156
MS.gene064518.t1 MTR_2g015080 31.111 360 208 13 8 345 11 352 6.65e-45 158
MS.gene064518.t1 MTR_8g022810 32.407 324 194 11 48 355 43 357 7.32e-43 153
MS.gene064518.t1 MTR_8g031390 30.816 331 207 9 37 355 27 347 5.83e-42 151
MS.gene064518.t1 MTR_8g022790 30.508 354 214 10 10 351 7 340 8.87e-42 150
MS.gene064518.t1 MTR_1g025910 34.177 316 183 8 51 351 41 346 1.65e-41 149
MS.gene064518.t1 MTR_4g056280 33.121 314 196 10 48 351 32 341 1.84e-41 149
MS.gene064518.t1 MTR_5g087690 27.864 323 205 8 48 356 52 360 3.99e-41 149
MS.gene064518.t1 MTR_4g087985 31.447 318 191 12 48 345 38 348 2.76e-40 146
MS.gene064518.t1 MTR_8g031420 29.012 324 200 9 48 355 37 346 2.80e-38 140
MS.gene064518.t1 MTR_8g031400 29.464 336 206 10 37 355 27 348 8.13e-38 139
MS.gene064518.t1 MTR_8g074580 28.610 367 193 10 48 355 46 402 2.06e-37 139
MS.gene064518.t1 MTR_8g031430 27.893 337 207 10 35 355 32 348 1.24e-36 136
MS.gene064518.t1 MTR_5g083040 29.607 331 212 9 35 349 21 346 5.87e-35 132
MS.gene064518.t1 MTR_1g079590 36.667 210 119 4 18 222 11 211 7.91e-35 127
MS.gene064518.t1 MTR_8g031390 29.643 280 181 7 37 310 27 296 3.96e-33 126
MS.gene064518.t1 MTR_2g017925 33.182 220 133 7 141 356 26 235 1.36e-30 117
MS.gene064518.t1 MTR_6g007100 29.305 331 207 9 48 362 35 354 9.70e-30 117
MS.gene064518.t1 MTR_2g087292 29.073 313 136 10 48 354 35 267 1.63e-28 112
MS.gene064518.t1 MTR_8g022810 35.047 214 122 8 48 253 43 247 2.30e-28 113
MS.gene064518.t1 MTR_5g093090 34.807 181 106 3 47 217 29 207 4.04e-28 110
MS.gene064518.t1 MTR_2g017895 29.918 244 145 6 116 356 29 249 5.50e-27 108
MS.gene064518.t1 MTR_2g018015 37.168 226 127 9 36 250 26 247 1.97e-26 107
MS.gene064518.t1 MTR_4g104240 25.654 382 235 15 8 362 9 368 2.63e-26 108
MS.gene064518.t1 MTR_1g030340 29.494 356 187 16 50 362 46 380 2.64e-26 108
MS.gene064518.t1 MTR_6g007090 28.940 349 196 12 48 362 41 371 3.22e-26 108
MS.gene064518.t1 MTR_6g007095 29.446 343 202 11 41 359 360 686 6.28e-26 109
MS.gene064518.t1 MTR_6g007095 28.818 347 199 11 48 362 43 373 2.09e-23 102
MS.gene064518.t1 MTR_1g030275 27.508 309 190 9 83 362 71 374 1.45e-24 103
MS.gene064518.t1 MTR_2g015580 27.100 369 220 13 11 351 23 370 5.21e-24 102
MS.gene064518.t1 MTR_5g074210 30.573 157 100 3 204 351 46 202 5.57e-24 99.0
MS.gene064518.t1 MTR_1g030220 28.161 348 201 14 50 362 44 377 1.47e-23 101
MS.gene064518.t1 MTR_3g438030 26.513 347 214 12 50 368 34 367 1.60e-23 100
MS.gene064518.t1 MTR_7g111780 27.193 342 200 13 46 360 36 355 1.85e-23 100
MS.gene064518.t1 MTR_3g463960 26.000 350 212 14 50 366 48 383 2.79e-23 100
MS.gene064518.t1 MTR_3g463950 26.000 350 212 14 50 366 48 383 2.79e-23 100
MS.gene064518.t1 MTR_3g463970 26.000 350 212 14 50 366 48 383 2.79e-23 100
MS.gene064518.t1 MTR_3g463940 26.000 350 212 14 50 366 48 383 2.79e-23 100
MS.gene064518.t1 MTR_1108s0010 29.954 217 134 5 145 356 2 205 5.40e-23 96.3
MS.gene064518.t1 MTR_2g043980 27.003 337 200 12 50 362 38 352 5.54e-23 99.0
MS.gene064518.t1 MTR_8g038680 27.089 347 210 10 48 362 30 365 5.83e-23 99.0
MS.gene064518.t1 MTR_1g030268 27.244 312 187 12 83 362 72 375 7.09e-23 99.0
MS.gene064518.t1 MTR_3g069780 27.089 347 212 13 50 368 34 367 9.21e-23 98.6
MS.gene064518.t1 MTR_7g111780 29.707 239 141 8 141 360 26 256 3.98e-22 94.7
MS.gene064518.t1 MTR_3g448360 27.066 351 206 16 50 367 33 366 1.35e-21 95.1
MS.gene064518.t1 MTR_7g033150 23.876 356 211 15 50 362 39 377 3.32e-21 94.4
MS.gene064518.t1 MTR_8g089805 26.136 352 206 15 50 362 44 380 3.83e-21 94.4
MS.gene064518.t1 MTR_7g113860 26.000 400 232 17 6 368 7 379 4.57e-21 94.0
MS.gene064518.t1 MTR_7g033165 28.531 354 191 16 48 359 35 368 5.13e-21 93.6
MS.gene064518.t1 MTR_7g087190 26.554 354 203 15 50 362 47 384 8.31e-21 93.2
MS.gene064518.t1 MTR_7g104220 26.984 315 191 12 48 345 44 336 1.46e-20 92.0
MS.gene064518.t1 MTR_7g116870 25.063 395 236 16 1 362 1 368 1.64e-20 92.4
MS.gene064518.t1 MTR_7g113860 26.966 356 208 15 50 368 33 373 1.77e-20 92.0
MS.gene064518.t1 MTR_1g030230 26.349 315 188 13 83 362 64 369 2.11e-20 92.0
MS.gene064518.t1 MTR_3g463930 25.915 355 213 15 50 366 48 390 2.33e-20 92.0
MS.gene064518.t1 MTR_1g030265 26.740 273 166 9 119 362 75 342 3.18e-20 90.9
MS.gene064518.t1 MTR_2g015630 26.844 339 208 14 51 359 36 364 5.01e-20 90.9
MS.gene064518.t1 MTR_1g060490 26.498 317 202 12 48 351 39 337 5.38e-20 90.5
MS.gene064518.t1 MTR_1g092690 26.361 349 216 12 10 342 17 340 1.52e-19 89.4
MS.gene064518.t1 MTR_7g033155 23.249 357 217 12 50 359 42 388 2.53e-19 89.0
MS.gene064518.t1 MTR_2g079090 26.686 341 206 14 50 366 34 354 2.55e-19 88.6
MS.gene064518.t1 MTR_7g113860 26.408 284 166 10 118 368 32 305 4.97e-19 87.0
MS.gene064518.t1 MTR_2g079080 26.686 341 206 14 50 366 34 354 8.84e-19 87.0
MS.gene064518.t1 MTR_0029s0050 26.979 341 205 14 50 366 34 354 1.07e-18 86.7
MS.gene064518.t1 MTR_1g082390 28.488 344 201 16 50 360 35 366 1.26e-18 86.7
MS.gene064518.t1 MTR_8g089805 25.463 216 136 5 168 362 101 312 1.85e-18 85.5
MS.gene064518.t1 MTR_0029s0100 26.979 341 205 14 50 366 34 354 2.11e-18 85.9
MS.gene064518.t1 MTR_3g069520 26.724 348 210 15 50 368 34 365 2.11e-18 85.9
MS.gene064518.t1 MTR_2g015650 25.521 384 230 14 12 362 5 365 3.15e-18 85.5
MS.gene064518.t1 MTR_1g060500 25.688 327 200 14 48 351 42 348 9.54e-18 84.0
MS.gene064518.t1 MTR_8g028160 24.571 350 213 14 50 362 40 375 4.39e-17 82.4
MS.gene064518.t1 MTR_2g015590 27.273 330 203 15 50 351 35 355 7.68e-17 81.6
MS.gene064518.t1 MTR_1g092750 25.559 313 192 11 48 342 42 331 6.04e-16 78.6
MS.gene064518.t1 MTR_2g015670 25.000 336 210 16 50 362 35 351 6.35e-15 75.5
MS.gene064518.t1 MTR_5g084880 32.824 131 81 3 198 321 7 137 6.49e-15 71.6
MS.gene064518.t1 MTR_1g092760 27.586 319 177 15 48 342 41 329 1.40e-14 74.7
MS.gene064518.t1 MTR_8g062580 35.246 122 73 5 241 358 65 184 3.51e-14 72.0
MS.gene064518.t1 MTR_4g036375 35.374 147 86 6 48 188 32 175 5.22e-14 70.5
MS.gene064518.t1 MTR_1g079570 28.926 121 84 2 237 355 4 124 1.54e-13 67.8
MS.gene064518.t1 MTR_1g092740 24.545 330 211 11 44 357 36 343 2.01e-13 71.2
MS.gene064518.t1 MTR_1g030268 27.500 240 145 9 83 301 72 303 2.02e-13 70.9
MS.gene064518.t1 MTR_8g012540 26.224 286 177 9 48 310 30 304 2.32e-13 70.9
MS.gene064518.t1 MTR_4g036385 31.624 117 78 2 245 359 17 133 4.21e-13 66.2
MS.gene064518.t1 MTR_3g011860 32.990 97 64 1 235 330 226 322 1.72e-12 68.2
MS.gene064518.t1 MTR_2g015590 26.978 278 174 11 50 306 35 304 1.03e-11 65.9
MS.gene064518.t1 MTR_6g049230 31.298 131 86 3 209 335 64 194 8.57e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064518.t1 AT5G37690 67.622 349 99 2 10 354 1 339 2.74e-180 504
MS.gene064518.t1 AT5G37690 67.536 345 98 2 10 354 1 331 5.97e-178 498
MS.gene064518.t1 AT1G74460 45.906 342 171 4 43 370 20 361 2.33e-103 309
MS.gene064518.t1 AT2G23540 40.483 373 199 9 1 354 1 369 6.95e-83 258
MS.gene064518.t1 AT1G71691 43.312 314 168 6 48 355 57 366 1.07e-80 252
MS.gene064518.t1 AT3G50400 41.370 365 184 12 8 354 4 356 3.07e-80 250
MS.gene064518.t1 AT5G15720 43.574 319 166 7 48 355 32 347 3.70e-79 247
MS.gene064518.t1 AT1G29670 40.244 328 180 10 48 366 34 354 1.41e-76 241
MS.gene064518.t1 AT5G33370 38.535 314 185 5 49 355 33 345 2.01e-76 240
MS.gene064518.t1 AT1G29670 40.244 328 180 10 48 366 102 422 1.92e-75 240
MS.gene064518.t1 AT1G71250 39.683 315 180 6 48 354 43 355 1.52e-73 233
MS.gene064518.t1 AT5G08460 38.558 319 184 6 48 355 51 368 5.72e-72 229
MS.gene064518.t1 AT5G45670 37.006 354 198 10 10 354 6 343 1.04e-71 228
MS.gene064518.t1 AT1G29660 39.938 323 179 9 48 360 34 351 2.24e-71 227
MS.gene064518.t1 AT4G18970 39.634 328 184 9 48 366 30 352 4.50e-71 226
MS.gene064518.t1 AT4G18970 39.634 328 184 9 48 366 30 352 3.18e-70 226
MS.gene064518.t1 AT3G04290 35.897 351 201 7 12 355 11 344 3.24e-69 222
MS.gene064518.t1 AT1G33811 36.957 368 206 12 12 362 3 361 8.65e-69 221
MS.gene064518.t1 AT5G41890 39.466 337 168 11 42 351 27 354 4.22e-68 219
MS.gene064518.t1 AT1G71691 40.530 264 153 3 94 355 4 265 3.23e-66 211
MS.gene064518.t1 AT4G28780 35.873 315 194 4 48 355 33 346 7.51e-66 213
MS.gene064518.t1 AT5G18430 36.593 317 191 6 48 355 30 345 1.11e-65 213
MS.gene064518.t1 AT5G15720 42.066 271 150 4 92 355 46 316 6.44e-65 209
MS.gene064518.t1 AT4G10950 35.048 311 198 3 48 355 73 382 2.69e-64 210
MS.gene064518.t1 AT4G10950 34.921 315 197 4 48 355 73 386 5.48e-64 209
MS.gene064518.t1 AT2G42990 35.312 320 191 9 49 357 31 345 1.21e-63 207
MS.gene064518.t1 AT1G71691 43.629 259 137 5 48 301 57 311 3.33e-61 199
MS.gene064518.t1 AT5G42170 34.247 365 214 11 9 354 4 361 4.68e-59 196
MS.gene064518.t1 AT2G04570 34.242 330 204 9 39 358 20 346 6.24e-59 194
MS.gene064518.t1 AT5G15720 42.045 264 140 6 48 301 32 292 1.25e-57 190
MS.gene064518.t1 AT5G33370 37.452 259 155 4 49 301 33 290 2.92e-57 189
MS.gene064518.t1 AT5G03810 35.562 329 194 10 37 354 24 345 1.38e-56 189
MS.gene064518.t1 AT5G03820 35.311 354 203 12 15 354 8 349 1.81e-56 188
MS.gene064518.t1 AT4G26790 35.577 312 187 9 49 350 32 339 4.50e-56 187
MS.gene064518.t1 AT4G26790 35.577 312 187 9 49 350 32 339 4.50e-56 187
MS.gene064518.t1 AT5G03820 35.311 354 203 12 15 354 36 377 7.05e-56 187
MS.gene064518.t1 AT2G19060 34.985 323 186 10 48 360 32 340 2.27e-55 185
MS.gene064518.t1 AT1G75890 34.177 316 197 6 49 355 50 363 9.33e-55 184
MS.gene064518.t1 AT5G55050 35.238 315 181 9 48 345 41 349 1.95e-54 184
MS.gene064518.t1 AT2G19010 33.509 379 214 13 6 365 14 373 1.97e-54 184
MS.gene064518.t1 AT1G75890 34.177 316 197 6 49 355 79 392 2.43e-54 184
MS.gene064518.t1 AT1G75890 33.232 328 197 6 49 355 50 376 4.05e-54 183
MS.gene064518.t1 AT2G19010 34.848 330 185 11 48 365 32 343 4.49e-54 182
MS.gene064518.t1 AT2G19050 34.049 326 183 12 48 360 33 339 1.00e-52 178
MS.gene064518.t1 AT3G16370 35.404 322 191 10 50 359 34 350 5.98e-52 176
MS.gene064518.t1 AT1G75880 31.944 360 225 10 6 354 17 367 1.17e-51 176
MS.gene064518.t1 AT2G30220 34.091 308 189 6 49 345 36 340 6.13e-51 174
MS.gene064518.t1 AT5G22810 36.000 325 185 12 48 356 36 353 6.35e-51 174
MS.gene064518.t1 AT4G16230 43.043 230 117 7 38 256 20 246 1.19e-50 170
MS.gene064518.t1 AT1G75880 31.944 360 224 11 6 354 17 366 7.07e-50 172
MS.gene064518.t1 AT2G30310 33.117 308 192 6 49 345 37 341 1.75e-49 170
MS.gene064518.t1 AT1G59406 33.230 322 196 11 49 359 33 346 1.44e-48 167
MS.gene064518.t1 AT1G59030 33.230 322 196 11 49 359 33 346 1.44e-48 167
MS.gene064518.t1 AT1G58725 33.230 322 196 11 49 359 33 346 1.44e-48 167
MS.gene064518.t1 AT1G58430 30.636 346 219 7 11 345 7 342 2.62e-48 167
MS.gene064518.t1 AT5G45960 32.081 346 202 12 31 360 35 363 2.66e-48 167
MS.gene064518.t1 AT2G03980 35.759 316 181 11 48 350 45 351 5.41e-48 166
MS.gene064518.t1 AT2G03980 35.759 316 181 11 48 350 45 351 5.41e-48 166
MS.gene064518.t1 AT2G03980 35.759 316 181 11 48 350 45 351 5.41e-48 166
MS.gene064518.t1 AT2G03980 35.759 316 181 11 48 350 45 351 5.41e-48 166
MS.gene064518.t1 AT3G14820 33.754 317 192 12 49 355 35 343 1.06e-47 165
MS.gene064518.t1 AT1G75900 31.686 344 215 11 16 350 20 352 1.12e-47 166
MS.gene064518.t1 AT1G20120 33.645 321 189 10 48 353 80 391 2.45e-47 166
MS.gene064518.t1 AT2G31540 32.710 321 184 10 49 349 38 346 5.75e-47 164
MS.gene064518.t1 AT5G45950 31.746 315 203 7 49 357 43 351 6.89e-47 163
MS.gene064518.t1 AT2G24560 32.686 309 192 8 49 345 37 341 7.45e-47 163
MS.gene064518.t1 AT2G40250 30.982 326 205 8 48 358 38 358 1.06e-46 163
MS.gene064518.t1 AT1G06990 29.595 321 211 8 49 358 40 356 2.38e-46 162
MS.gene064518.t1 AT1G20135 35.179 307 171 9 50 345 33 322 7.07e-46 160
MS.gene064518.t1 AT3G53100 33.438 317 187 12 49 350 32 339 3.44e-45 159
MS.gene064518.t1 AT1G73610 32.022 356 210 10 9 357 9 339 4.21e-44 155
MS.gene064518.t1 AT1G20130 32.132 333 197 11 48 357 186 512 9.02e-44 159
MS.gene064518.t1 AT1G58520 32.298 322 192 12 49 359 33 339 9.02e-44 155
MS.gene064518.t1 AT1G58525 32.298 322 192 12 49 359 33 339 9.02e-44 155
MS.gene064518.t1 AT1G20130 32.132 333 197 11 48 357 206 532 1.42e-43 158
MS.gene064518.t1 AT5G63170 34.754 305 175 11 50 345 32 321 1.56e-43 154
MS.gene064518.t1 AT3G43570 30.252 357 198 12 10 359 5 317 1.60e-43 154
MS.gene064518.t1 AT1G23500 33.333 354 201 12 17 357 9 340 2.15e-43 154
MS.gene064518.t1 AT4G30140 32.919 322 190 12 48 360 35 339 3.57e-42 150
MS.gene064518.t1 AT5G40990 31.098 328 196 11 48 355 39 356 2.33e-40 146
MS.gene064518.t1 AT3G14225 32.416 327 197 9 48 355 39 360 6.91e-40 145
MS.gene064518.t1 AT3G14225 32.308 325 196 9 48 355 39 356 1.36e-39 144
MS.gene064518.t1 AT1G20132 30.530 321 203 10 47 354 62 375 2.87e-39 144
MS.gene064518.t1 AT2G19050 35.743 249 139 9 48 287 33 269 1.98e-38 139
MS.gene064518.t1 AT1G75930 32.278 316 188 12 48 351 31 332 3.12e-38 140
MS.gene064518.t1 AT1G75910 32.372 312 192 8 50 352 32 333 1.39e-37 138
MS.gene064518.t1 AT1G71120 27.103 321 209 10 48 355 33 341 2.89e-37 138
MS.gene064518.t1 AT1G53990 28.000 325 195 9 48 351 37 343 1.17e-36 136
MS.gene064518.t1 AT1G53920 28.116 345 223 10 11 340 14 348 3.86e-36 135
MS.gene064518.t1 AT1G53940 29.290 338 210 10 48 368 41 366 4.01e-36 135
MS.gene064518.t1 AT1G75920 31.230 317 198 9 50 357 33 338 2.75e-35 132
MS.gene064518.t1 AT3G43550 33.588 262 157 9 49 301 33 286 3.10e-35 130
MS.gene064518.t1 AT2G24560 32.061 262 167 6 49 301 37 296 1.34e-34 130
MS.gene064518.t1 AT1G54030 29.642 307 185 9 48 346 54 337 1.78e-34 132
MS.gene064518.t1 AT1G75920 29.217 332 200 8 50 357 28 348 7.12e-33 126
MS.gene064518.t1 AT2G04020 30.990 313 150 13 48 346 45 305 6.48e-30 117
MS.gene064518.t1 AT2G31550 29.032 217 130 5 150 352 2 208 5.37e-29 112
MS.gene064518.t1 AT2G04020 35.122 205 118 6 48 245 45 241 1.26e-28 112
MS.gene064518.t1 AT1G54020 26.562 320 203 9 48 356 35 333 1.40e-28 114
MS.gene064518.t1 AT1G56670 28.453 362 203 14 34 363 28 365 9.63e-28 112
MS.gene064518.t1 AT1G75920 29.392 296 190 8 71 357 25 310 1.28e-27 111
MS.gene064518.t1 AT1G75920 27.885 312 184 8 50 357 33 307 1.93e-27 110
MS.gene064518.t1 AT1G54000 28.261 368 224 13 1 356 2 341 1.96e-27 112
MS.gene064518.t1 AT1G53940 29.562 274 172 8 48 311 41 303 9.38e-27 108
MS.gene064518.t1 AT1G54010 27.446 368 227 14 1 356 2 341 6.63e-26 107
MS.gene064518.t1 AT2G27360 28.446 341 208 13 50 362 37 369 9.55e-26 107
MS.gene064518.t1 AT1G54030 29.119 261 155 8 48 300 54 292 1.04e-25 105
MS.gene064518.t1 AT1G28580 28.655 342 205 16 50 362 41 372 1.98e-25 106
MS.gene064518.t1 AT4G16233 39.450 109 64 1 249 355 5 113 7.50e-25 98.6
MS.gene064518.t1 AT1G09390 28.682 387 211 17 8 363 10 362 1.38e-24 103
MS.gene064518.t1 AT3G14210 26.888 331 201 11 45 356 35 343 1.15e-23 101
MS.gene064518.t1 AT1G54790 26.184 359 207 14 50 368 36 376 3.36e-23 100
MS.gene064518.t1 AT1G31550 27.907 344 204 12 50 362 40 370 3.89e-23 100
MS.gene064518.t1 AT3G05180 27.684 354 200 13 50 364 40 376 8.35e-23 99.0
MS.gene064518.t1 AT1G54020 26.749 243 160 6 118 356 19 247 4.05e-22 95.5
MS.gene064518.t1 AT1G54020 26.749 243 160 6 118 356 19 247 4.05e-22 95.5
MS.gene064518.t1 AT1G54020 26.749 243 160 6 118 356 19 247 4.05e-22 95.5
MS.gene064518.t1 AT3G14220 25.846 325 206 12 46 355 32 336 1.03e-21 95.5
MS.gene064518.t1 AT3G48460 24.935 385 244 16 1 359 1 366 1.22e-21 95.5
MS.gene064518.t1 AT5G03610 25.680 331 206 14 48 357 45 356 1.62e-21 94.7
MS.gene064518.t1 AT1G28570 27.826 345 204 17 50 362 38 369 4.34e-21 94.0
MS.gene064518.t1 AT1G28600 26.453 344 209 14 50 362 35 365 7.06e-21 93.6
MS.gene064518.t1 AT1G54790 25.275 364 204 14 50 368 35 375 1.16e-20 92.8
MS.gene064518.t1 AT1G28650 24.403 377 242 15 11 360 10 370 1.39e-20 92.4
MS.gene064518.t1 AT1G54020 28.646 192 131 4 169 356 9 198 1.41e-20 90.1
MS.gene064518.t1 AT5G14450 26.571 350 209 14 48 362 43 379 1.90e-20 92.0
MS.gene064518.t1 AT1G31550 27.114 343 205 13 50 362 40 367 5.48e-20 90.9
MS.gene064518.t1 AT5G45910 26.893 383 226 19 13 359 3 367 9.05e-20 90.1
MS.gene064518.t1 AT3G09930 27.273 319 185 12 48 343 41 335 1.02e-19 89.7
MS.gene064518.t1 AT3G09930 27.273 319 185 12 48 343 41 335 1.02e-19 89.7
MS.gene064518.t1 AT1G67830 26.901 342 196 14 50 352 34 360 1.02e-19 89.7
MS.gene064518.t1 AT1G28640 26.166 386 231 18 8 360 4 368 1.66e-19 89.4
MS.gene064518.t1 AT1G28610 26.888 331 202 14 50 351 35 354 8.65e-19 87.4
MS.gene064518.t1 AT1G28580 26.241 282 177 12 103 362 19 291 9.49e-19 86.3
MS.gene064518.t1 AT1G28590 26.163 344 211 15 50 362 40 371 1.59e-18 86.7
MS.gene064518.t1 AT1G28670 26.718 393 230 20 8 367 4 371 1.74e-18 86.3
MS.gene064518.t1 AT3G27950 26.012 346 205 12 50 362 36 363 2.11e-18 86.3
MS.gene064518.t1 AT3G62280 26.190 336 202 12 50 359 40 355 3.96e-18 85.1
MS.gene064518.t1 AT3G14210 28.889 225 141 6 141 356 1 215 6.78e-18 83.2
MS.gene064518.t1 AT4G01130 24.928 349 213 13 50 362 38 373 1.95e-17 83.2
MS.gene064518.t1 AT1G28660 25.127 394 234 19 8 367 4 370 3.18e-17 82.8
MS.gene064518.t1 AT3G26430 24.090 357 207 14 50 362 35 371 3.68e-17 82.4
MS.gene064518.t1 AT1G56670 27.835 291 166 12 34 301 28 297 1.11e-16 80.1
MS.gene064518.t1 AT4G01130 23.832 214 137 3 170 362 79 287 2.05e-16 79.3
MS.gene064518.t1 AT1G28660 25.127 394 233 20 8 367 4 369 5.66e-16 79.0
MS.gene064518.t1 AT4G16220 38.298 141 56 6 1 134 4 120 3.25e-14 72.0
MS.gene064518.t1 AT2G36325 25.714 315 192 14 48 343 49 340 1.35e-12 68.6
MS.gene064518.t1 AT5G03600 23.962 313 192 11 48 342 16 300 2.79e-12 67.4
MS.gene064518.t1 AT5G03600 23.962 313 192 11 48 342 51 335 2.92e-12 67.8
MS.gene064518.t1 AT4G01130 25.606 289 177 13 50 313 38 313 7.47e-11 63.2

Find 68 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCGGAATGAATATGTATTT+TGG 0.087334 5.3:-63240274 MS.gene064518:CDS
TAATTTCTTGCAGCCGTTTA+TGG 0.179040 5.3:-63240885 MS.gene064518:CDS
AGAAGCAATCACAGGAAAAT+TGG 0.218279 5.3:-63241099 MS.gene064518:CDS
GGTCATCTCTTTGCTTCTTT+TGG 0.218438 5.3:-63246069 MS.gene064518:CDS
TACCTTAAGTTGTTGATCTA+AGG 0.241725 5.3:+63240811 None:intergenic
AAGATTGTTACCTATATCTT+TGG 0.304323 5.3:-63241799 MS.gene064518:CDS
CTTTAAACATTGGCCTCGTT+TGG 0.307988 5.3:+63240621 None:intergenic
GTGATCCTTGAACAGGCTTA+TGG 0.330002 5.3:-63245878 MS.gene064518:intron
CCCAAAATACATATTCATTC+CGG 0.339117 5.3:+63240273 None:intergenic
AATGAAGCCACATACTTCAT+TGG 0.342866 5.3:-63241050 MS.gene064518:CDS
CTATAGTCAATTCCATAAAA+AGG 0.353095 5.3:+63241712 None:intergenic
AACCTTAGATCAACAACTTA+AGG 0.379257 5.3:-63240813 MS.gene064518:intron
TTTACCAATGGAAGGACTAT+TGG 0.402348 5.3:-63241667 MS.gene064518:intron
TAAAGAATCACCAAAGATAT+AGG 0.403952 5.3:+63241789 None:intergenic
GTTTAAAGCAAGTTAATGAA+TGG 0.410689 5.3:-63240606 MS.gene064518:CDS
ATGTCGATGCCCTTCTCAAA+GGG 0.417332 5.3:-63241315 MS.gene064518:CDS
GGTGATTCTTTAACAGATGT+AGG 0.424775 5.3:-63241778 MS.gene064518:CDS
GAAGCAATCACAGGAAAATT+GGG 0.432117 5.3:-63241098 MS.gene064518:CDS
ATGAAGCCACATACTTCATT+GGG 0.432552 5.3:-63241049 MS.gene064518:CDS
ACTCATCATGAGTATATTGT+TGG 0.446312 5.3:+63240855 None:intergenic
ATCGATAATCCATCTACATA+TGG 0.448631 5.3:-63240475 MS.gene064518:intron
AAAGGGGTAAATTATGCATC+TGG 0.463353 5.3:-63241298 MS.gene064518:CDS
CATTAACTTGCTTTAAACAT+TGG 0.463554 5.3:+63240611 None:intergenic
TGTTGGCCATCTGCCATAAA+CGG 0.464753 5.3:+63240872 None:intergenic
TATAGTGGTGGCCAAGCTAC+TGG 0.469691 5.3:-63241694 MS.gene064518:CDS
TTGCAGCCGTTTATGGCAGA+TGG 0.485530 5.3:-63240878 MS.gene064518:CDS
AGAAATTAAGGGGAAGGGCT+AGG 0.486488 5.3:+63240164 None:intergenic
TCGATTAAGTCAAGAACTAA+AGG 0.488857 5.3:+63240493 None:intergenic
TTGGATTTAACTCTTTGTGA+TGG 0.494538 5.3:+63240640 None:intergenic
GTGATTCTTTAACAGATGTA+GGG 0.498763 5.3:-63241777 MS.gene064518:CDS
CATAATTTACCCCTTTGAGA+AGG 0.498835 5.3:+63241305 None:intergenic
TACCAGAGACTGTATCAGTT+AGG 0.512597 5.3:-63240709 MS.gene064518:intron
AATTATGCATCTGGTGGAGC+GGG 0.521880 5.3:-63241289 MS.gene064518:CDS
AATGTAGACACAAGCATTGG+AGG 0.524774 5.3:-63240329 MS.gene064518:CDS
TGGTAAATCTTCCAGTAGCT+TGG 0.534429 5.3:+63241683 None:intergenic
GAAGGGCTAGGTGCTGCAGA+TGG 0.535879 5.3:+63240176 None:intergenic
ATAGCATTTGCTGCATCTGA+TGG 0.538022 5.3:+63240239 None:intergenic
TTGCAATGGCTCCATCTTGG+TGG 0.538056 5.3:-63246090 MS.gene064518:CDS
TGAGGCACTGACAAATAAGC+TGG 0.538105 5.3:+63241340 None:intergenic
TTTCACGGACTTGGTCCACT+CGG 0.540757 5.3:-63240670 MS.gene064518:CDS
TGCAATGTAGACACAAGCAT+TGG 0.545648 5.3:-63240332 MS.gene064518:CDS
AATGTCGATGCCCTTCTCAA+AGG 0.551571 5.3:-63241316 MS.gene064518:CDS
ATAATTTACCCCTTTGAGAA+GGG 0.552596 5.3:+63241306 None:intergenic
ACCTATCCCAATGAAGTATG+TGG 0.560796 5.3:+63241043 None:intergenic
CAAAGAGATGACCACCAAGA+TGG 0.560846 5.3:+63246079 None:intergenic
CGTGCAAAACTTCGTCCTCA+AGG 0.561656 5.3:-63245854 MS.gene064518:intron
TGTATGAGAAATTAAGGGGA+AGG 0.565693 5.3:+63240158 None:intergenic
TAAGTCAAGAACTAAAGGAT+AGG 0.566656 5.3:+63240498 None:intergenic
ATCACCAATAGTCCTTCCAT+TGG 0.574076 5.3:+63241663 None:intergenic
GTATGAGAAATTAAGGGGAA+GGG 0.581762 5.3:+63240159 None:intergenic
ACGTTGCAATGGCTCCATCT+TGG 0.582831 5.3:-63246093 MS.gene064518:CDS
TATGGAATTGACTATAGTGG+TGG 0.585123 5.3:-63241706 MS.gene064518:CDS
AAAACTAAAGAAGCAATCAC+AGG 0.588868 5.3:-63241107 MS.gene064518:CDS
TTGATGTATGAGAAATTAAG+GGG 0.591200 5.3:+63240154 None:intergenic
AGGAAAGTTAGATTTGGCCA+AGG 0.593264 5.3:+63241732 None:intergenic
CTGGAAGATTTACCAATGGA+AGG 0.593781 5.3:-63241675 MS.gene064518:CDS
TACATTCTCTAATGTAGCTG+AGG 0.595669 5.3:-63246045 MS.gene064518:intron
ACAATGGCAGCACGTTGCAA+TGG 0.611244 5.3:-63246104 MS.gene064518:CDS
GGGGTAAATTATGCATCTGG+TGG 0.613940 5.3:-63241295 MS.gene064518:CDS
AAATTATGCATCTGGTGGAG+CGG 0.615664 5.3:-63241290 MS.gene064518:CDS
CTAATCATCAAACTAAACCA+TGG 0.634969 5.3:-63240553 MS.gene064518:CDS
GCCACATACTTCATTGGGAT+AGG 0.636934 5.3:-63241044 MS.gene064518:intron
GCTACTGGAAGATTTACCAA+TGG 0.648054 5.3:-63241679 MS.gene064518:CDS
TGTCGATGCCCTTCTCAAAG+GGG 0.661110 5.3:-63241314 MS.gene064518:CDS
GCGGGAATTCTCAATGACAC+AGG 0.663648 5.3:-63241271 MS.gene064518:CDS
CAAAGAGTTAAATCCAAACG+AGG 0.705796 5.3:-63240634 MS.gene064518:CDS
TGTGATGGAATACAACCGAG+TGG 0.734121 5.3:+63240655 None:intergenic
GGCACTGACAAATAAGCTGG+TGG 0.736961 5.3:+63241343 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTAATAAAAAAA+AGG - chr5.3:63242485-63242504 MS.gene064518:intron 0.0%
!! AAATAATGAAGAATAAAAAA+TGG - chr5.3:63242111-63242130 MS.gene064518:intron 10.0%
!!! TAATTTTCAATAAAAGAAAA+AGG + chr5.3:63244668-63244687 None:intergenic 10.0%
!! AAATTAAAGGTAGATATAAT+AGG - chr5.3:63242684-63242703 MS.gene064518:intron 15.0%
!! CCAAATTTGAAAAATAAATA+AGG + chr5.3:63241267-63241286 None:intergenic 15.0%
!! GAAAATTATTTAGTAATACT+TGG - chr5.3:63240929-63240948 MS.gene064518:intron 15.0%
!! GTGTTTCAAAAAAAAAATAT+AGG - chr5.3:63243627-63243646 MS.gene064518:intron 15.0%
!! TATTTGAATGCAATATATAT+TGG - chr5.3:63244004-63244023 MS.gene064518:intron 15.0%
!! TGAGTATATGATATTATATT+TGG + chr5.3:63241609-63241628 None:intergenic 15.0%
!! TGTAAAATGAAAAAAATCAA+TGG + chr5.3:63242747-63242766 None:intergenic 15.0%
!! TTTATTATCTCTAAATTGAA+CGG - chr5.3:63242626-63242645 MS.gene064518:intron 15.0%
!!! ACACAATAATTTTTTTTTGA+GGG + chr5.3:63241445-63241464 None:intergenic 15.0%
!!! AGTATAACTTGTTTAAAAAT+TGG - chr5.3:63240665-63240684 MS.gene064518:CDS 15.0%
!!! CCTTATTTATTTTTCAAATT+TGG - chr5.3:63241264-63241283 MS.gene064518:CDS 15.0%
!!! TATTTTTTTTTTGAAACACA+TGG + chr5.3:63243626-63243645 None:intergenic 15.0%
!!! TGTTATTTGAATATCATATT+GGG - chr5.3:63241579-63241598 MS.gene064518:intron 15.0%
!!! TTCTCTTTATTTATATCTTT+TGG - chr5.3:63241677-63241696 MS.gene064518:CDS 15.0%
!! AAAAATATAGGCTTAAACTT+TGG - chr5.3:63243639-63243658 MS.gene064518:intron 20.0%
!! AAAACCATTTACTATATGAT+TGG - chr5.3:63240271-63240290 MS.gene064518:CDS 20.0%
!! AAGAATAAAAAATGGTGAAA+TGG - chr5.3:63242119-63242138 MS.gene064518:intron 20.0%
!! ATAAAAAGGAAAGTTAGATT+TGG + chr5.3:63244547-63244566 None:intergenic 20.0%
!! ATAATCTTAAGCATAATGTA+AGG + chr5.3:63245839-63245858 None:intergenic 20.0%
!! ATACTGTCTATTAAAAGTAA+TGG + chr5.3:63243956-63243975 None:intergenic 20.0%
!! ATCAATAAAATCATAGAAGT+AGG + chr5.3:63244183-63244202 None:intergenic 20.0%
!! CTTGTTTGAATTGAAAAAAA+TGG + chr5.3:63243484-63243503 None:intergenic 20.0%
!! GTGTTTATACAAAAGAAAAA+AGG + chr5.3:63243429-63243448 None:intergenic 20.0%
!! GTTATTTGAATATCATATTG+GGG - chr5.3:63241580-63241599 MS.gene064518:intron 20.0%
!! GTTCTAATATTTCAAAACTT+TGG - chr5.3:63240362-63240381 MS.gene064518:intron 20.0%
!! TATGTTCCAACAAAAAATAT+AGG - chr5.3:63243552-63243571 MS.gene064518:intron 20.0%
!! TGAATTTACAAGTGATAAAA+AGG - chr5.3:63242354-63242373 MS.gene064518:intron 20.0%
!!! AAAATATTGTTACCAACTTT+TGG - chr5.3:63242544-63242563 MS.gene064518:intron 20.0%
!!! AAATATTGTTACCAACTTTT+GGG - chr5.3:63242545-63242564 MS.gene064518:intron 20.0%
!!! AAATCTAACTTTCCTTTTTA+TGG - chr5.3:63244546-63244565 MS.gene064518:intron 20.0%
!!! AAATTTTATACACACGTTAT+AGG + chr5.3:63242052-63242071 None:intergenic 20.0%
!!! AATGGAAATTTTGAAAAATG+TGG - chr5.3:63242137-63242156 MS.gene064518:intron 20.0%
!!! ACTGCCAAAATTTATTTTAA+TGG + chr5.3:63240548-63240567 None:intergenic 20.0%
!!! ATATTTTTTGTTGGAACATA+TGG + chr5.3:63243552-63243571 None:intergenic 20.0%
!!! ATTTGGTTCTTTGTAAAAAT+TGG - chr5.3:63243802-63243821 MS.gene064518:intron 20.0%
!!! ATTTGTATCAACTATGTTTT+TGG - chr5.3:63242889-63242908 MS.gene064518:intron 20.0%
!!! CACAATAATTTTTTTTTGAG+GGG + chr5.3:63241444-63241463 None:intergenic 20.0%
!!! CACACAATAATTTTTTTTTG+AGG + chr5.3:63241446-63241465 None:intergenic 20.0%
!!! GATAAACCTATATTTTTTGT+TGG + chr5.3:63243561-63243580 None:intergenic 20.0%
!!! GTGTTATTTGAATATCATAT+TGG - chr5.3:63241578-63241597 MS.gene064518:intron 20.0%
!!! TAAATTTTGGCAGTTTTATA+AGG - chr5.3:63240554-63240573 MS.gene064518:CDS 20.0%
!!! TAATTTTCTACAATATTCCT+TGG - chr5.3:63244521-63244540 MS.gene064518:intron 20.0%
!!! TCCTCCATTAAAATAAATTT+TGG - chr5.3:63240541-63240560 MS.gene064518:CDS 20.0%
!!! TTATAGAGAAATTTTGTAGT+TGG - chr5.3:63243062-63243081 MS.gene064518:intron 20.0%
!!! TTTTATAAGGAATTTTTCCT+TGG - chr5.3:63240567-63240586 MS.gene064518:CDS 20.0%
! AAAAAAATTATTGTGTGCCT+TGG - chr5.3:63241449-63241468 MS.gene064518:intron 25.0%
! AAAAAATGGTAGTTTCACAT+CGG + chr5.3:63243470-63243489 None:intergenic 25.0%
! AAAAGAAAAAAGGCTTCTTA+TGG + chr5.3:63243419-63243438 None:intergenic 25.0%
! AAACAAAGTTTACACAATTG+TGG + chr5.3:63241959-63241978 None:intergenic 25.0%
! AACATTGAAAAACAAAACCA+AGG + chr5.3:63241469-63241488 None:intergenic 25.0%
! AAGATTGTTACCTATATCTT+TGG - chr5.3:63244471-63244490 MS.gene064518:intron 25.0%
! AAGCAAACTAAATTTGTCAA+GGG + chr5.3:63244036-63244055 None:intergenic 25.0%
! AATAGACAGTATAGTATAGT+TGG - chr5.3:63243964-63243983 MS.gene064518:intron 25.0%
! AATTAAGGGGATATATAGTT+TGG + chr5.3:63243883-63243902 None:intergenic 25.0%
! AATTGCATATATATACCTTG+AGG + chr5.3:63240434-63240453 None:intergenic 25.0%
! AGAAATGAGAGTGAAAAAAT+TGG - chr5.3:63242073-63242092 MS.gene064518:intron 25.0%
! ATAGCCAAAAAGTTCTTATT+TGG - chr5.3:63243785-63243804 MS.gene064518:intron 25.0%
! ATCTTGCAATTATGTATGTT+TGG + chr5.3:63244272-63244291 None:intergenic 25.0%
! ATTTACAAGTGATAAAAAGG+TGG - chr5.3:63242357-63242376 MS.gene064518:intron 25.0%
! CATAATATATGAAGGTTGAA+AGG - chr5.3:63241379-63241398 MS.gene064518:intron 25.0%
! CATTCAAAATGTTAATACCA+AGG - chr5.3:63244397-63244416 MS.gene064518:intron 25.0%
! CTATAGTCAATTCCATAAAA+AGG + chr5.3:63244561-63244580 None:intergenic 25.0%
! CTTCATATATTATGGTCAAA+AGG + chr5.3:63241373-63241392 None:intergenic 25.0%
! CTTTCAACCTTCATATATTA+TGG + chr5.3:63241381-63241400 None:intergenic 25.0%
! GAAAATTAATAAACTGTGCA+AGG - chr5.3:63244680-63244699 MS.gene064518:intron 25.0%
! GAAATGAGAGTGAAAAAATT+GGG - chr5.3:63242074-63242093 MS.gene064518:intron 25.0%
! GAAATTAGTTGAATGTTAGA+AGG + chr5.3:63243526-63243545 None:intergenic 25.0%
! GTATAAGCAACCTAAAATTT+GGG - chr5.3:63240780-63240799 MS.gene064518:intron 25.0%
! GTATGAAATTAGTTGAAAGT+TGG + chr5.3:63243604-63243623 None:intergenic 25.0%
! TAAAGAATCACCAAAGATAT+AGG + chr5.3:63244484-63244503 None:intergenic 25.0%
! TAAATTATTAATGTTGAGCG+AGG + chr5.3:63240607-63240626 None:intergenic 25.0%
! TCATACCTATATTGTATGAA+AGG - chr5.3:63241302-63241321 MS.gene064518:CDS 25.0%
! TGAAGAAATTAAGTGCTTAA+GGG + chr5.3:63241217-63241236 None:intergenic 25.0%
! TGATCCAATCATATAGTAAA+TGG + chr5.3:63240278-63240297 None:intergenic 25.0%
! TGTATAAGCAACCTAAAATT+TGG - chr5.3:63240779-63240798 MS.gene064518:intron 25.0%
! TTAACGCGTTATGTAAATAT+GGG + chr5.3:63242796-63242815 None:intergenic 25.0%
! TTGAAGAAATTAAGTGCTTA+AGG + chr5.3:63241218-63241237 None:intergenic 25.0%
! TTTAACGCGTTATGTAAATA+TGG + chr5.3:63242797-63242816 None:intergenic 25.0%
!! AATATTGTTACCAACTTTTG+GGG - chr5.3:63242546-63242565 MS.gene064518:intron 25.0%
!! AGAACCAAATAAGAACTTTT+TGG + chr5.3:63243792-63243811 None:intergenic 25.0%
!! AGACTTTTTGTTGAAGTAAT+TGG - chr5.3:63243701-63243720 MS.gene064518:intron 25.0%
!! CTTAAAAAAAGGCATAGATT+TGG - chr5.3:63242255-63242274 MS.gene064518:intron 25.0%
!! CTTTTGACCATAATATATGA+AGG - chr5.3:63241371-63241390 MS.gene064518:intron 25.0%
!! GAAATTTTACCATATGTAGA+TGG + chr5.3:63245807-63245826 None:intergenic 25.0%
!! GTAAACTTTGTTTATACATG+AGG - chr5.3:63241966-63241985 MS.gene064518:intron 25.0%
!! GTTTAAAGCAAGTTAATGAA+TGG - chr5.3:63245664-63245683 MS.gene064518:intron 25.0%
!! TCTTTGACAATTTTAGATCA+TGG - chr5.3:63241913-63241932 MS.gene064518:intron 25.0%
!! TGGTGACATTTAATTTAGAT+GGG + chr5.3:63241872-63241891 None:intergenic 25.0%
!! TGGTTTTCACTATAAGATTT+AGG - chr5.3:63241933-63241952 MS.gene064518:intron 25.0%
!! TGTGTCTATAAGCAAATTTT+GGG - chr5.3:63240476-63240495 MS.gene064518:CDS 25.0%
!! TTATGCAATACATGTTTTGT+TGG - chr5.3:63244858-63244877 MS.gene064518:intron 25.0%
!! TTGTGTCTATAAGCAAATTT+TGG - chr5.3:63240475-63240494 MS.gene064518:intron 25.0%
!! TTTTATGGAATTGACTATAG+TGG - chr5.3:63244561-63244580 MS.gene064518:intron 25.0%
!! TTTTTCCTCTCTTCTTTTTT+TGG + chr5.3:63242987-63243006 None:intergenic 25.0%
!!! AATTTTGAAAAATGTGGAGA+TGG - chr5.3:63242143-63242162 MS.gene064518:intron 25.0%
!!! ATCATGACTTTTGTTATAAG+TGG + chr5.3:63241892-63241911 None:intergenic 25.0%
!!! ATTTTGAAAAATGTGGAGAT+GGG - chr5.3:63242144-63242163 MS.gene064518:intron 25.0%
!!! CATTAACTTGCTTTAAACAT+TGG + chr5.3:63245662-63245681 None:intergenic 25.0%
!!! GCCAAAATTTATTTTAATGG+AGG + chr5.3:63240545-63240564 None:intergenic 25.0%
!!! TGAAAGGCATTCTTAAATTT+TGG - chr5.3:63241395-63241414 MS.gene064518:intron 25.0%
!!! TTTTTGCATAACTTTGAGTT+TGG + chr5.3:63245977-63245996 None:intergenic 25.0%
AAAACTAAAGAAGCAATCAC+AGG - chr5.3:63245163-63245182 MS.gene064518:intron 30.0%
AAATGTATATCATCAAGCCT+AGG - chr5.3:63243297-63243316 MS.gene064518:intron 30.0%
AACCTTAGATCAACAACTTA+AGG - chr5.3:63245457-63245476 MS.gene064518:intron 30.0%
AAGTAGGTGTTTAAGTCAAT+TGG + chr5.3:63244167-63244186 None:intergenic 30.0%
ACTCAAAGTTATGCAAAAAC+CGG - chr5.3:63245978-63245997 MS.gene064518:intron 30.0%
ACTCACCTTTCATACAATAT+AGG + chr5.3:63241310-63241329 None:intergenic 30.0%
ACTCATCATGAGTATATTGT+TGG + chr5.3:63245418-63245437 None:intergenic 30.0%
AGCAAACTAAATTTGTCAAG+GGG + chr5.3:63244035-63244054 None:intergenic 30.0%
AGTAGGTGTTTAAGTCAATT+GGG + chr5.3:63244166-63244185 None:intergenic 30.0%
ATAGAAGGATTATTAGAAGG+TGG - chr5.3:63244371-63244390 MS.gene064518:intron 30.0%
ATCATATAGCTTACTGTGTA+AGG + chr5.3:63242415-63242434 None:intergenic 30.0%
ATCGATAATCCATCTACATA+TGG - chr5.3:63245795-63245814 MS.gene064518:intron 30.0%
ATGAAACAGATTGTAAACCA+AGG - chr5.3:63241030-63241049 MS.gene064518:intron 30.0%
ATGTTCGGCAAAAATTTGAT+TGG - chr5.3:63244768-63244787 MS.gene064518:intron 30.0%
CAAAATAGTTCAGACAAACT+TGG - chr5.3:63243133-63243152 MS.gene064518:intron 30.0%
CAAAATTGTATGAACAAAGC+AGG - chr5.3:63243753-63243772 MS.gene064518:intron 30.0%
CAAGCAAACTAAATTTGTCA+AGG + chr5.3:63244037-63244056 None:intergenic 30.0%
CCCAAAATACATATTCATTC+CGG + chr5.3:63246000-63246019 None:intergenic 30.0%
CGGATAATATTAGAAAGAAC+CGG - chr5.3:63243174-63243193 MS.gene064518:intron 30.0%
CTAATCATCAAACTAAACCA+TGG - chr5.3:63245717-63245736 MS.gene064518:intron 30.0%
CTAGTAAACTACATTTATGC+AGG - chr5.3:63245344-63245363 MS.gene064518:intron 30.0%
GAAATTAGTTGAAAGTTGGA+AGG + chr5.3:63243600-63243619 None:intergenic 30.0%
GCAATAGAAGGATTATTAGA+AGG - chr5.3:63244368-63244387 MS.gene064518:intron 30.0%
GCTAATTCAATTATCTGAGT+TGG - chr5.3:63244134-63244153 MS.gene064518:intron 30.0%
GTCTAACGCTTCTTAAAAAA+AGG - chr5.3:63242244-63242263 MS.gene064518:intron 30.0%
GTGATTCTTTAACAGATGTA+GGG - chr5.3:63244493-63244512 MS.gene064518:intron 30.0%
TAAGTCAAGAACTAAAGGAT+AGG + chr5.3:63245775-63245794 None:intergenic 30.0%
TACTTGCATGAAGAGAAATA+TGG - chr5.3:63244067-63244086 MS.gene064518:intron 30.0%
TCAGATAATTGAATTAGCCA+TGG + chr5.3:63244132-63244151 None:intergenic 30.0%
TCGATTAAGTCAAGAACTAA+AGG + chr5.3:63245780-63245799 None:intergenic 30.0%
TGATTTCCTACCTCATATAT+TGG + chr5.3:63243859-63243878 None:intergenic 30.0%
TTGCAATTATGTATGTTTGG+TGG + chr5.3:63244269-63244288 None:intergenic 30.0%
TTGGATTTAACTCTTTGTGA+TGG + chr5.3:63245633-63245652 None:intergenic 30.0%
TTTCACCACTTATTCAAGAT+CGG + chr5.3:63240856-63240875 None:intergenic 30.0%
TTTGAACACTCCATACTAAA+TGG - chr5.3:63242325-63242344 MS.gene064518:intron 30.0%
TTTGTTTATACATGAGGTTG+AGG - chr5.3:63241972-63241991 MS.gene064518:intron 30.0%
! ACCGGAATGAATATGTATTT+TGG - chr5.3:63245996-63246015 MS.gene064518:intron 30.0%
! ATAATTTACCCCTTTGAGAA+GGG + chr5.3:63244967-63244986 None:intergenic 30.0%
! CACTTCAACAACTAATTTTC+CGG + chr5.3:63243196-63243215 None:intergenic 30.0%
! CCGGAATGAATATGTATTTT+GGG - chr5.3:63245997-63246016 MS.gene064518:intron 30.0%
! GCACAAAAAATGGTTTTTCA+CGG - chr5.3:63245585-63245604 MS.gene064518:intron 30.0%
! GGTGACATTTAATTTAGATG+GGG + chr5.3:63241871-63241890 None:intergenic 30.0%
! GTATCTAGTATTTTGTACCA+AGG - chr5.3:63241417-63241436 MS.gene064518:intron 30.0%
! GTGGTGACATTTAATTTAGA+TGG + chr5.3:63241873-63241892 None:intergenic 30.0%
! TACCTTAAGTTGTTGATCTA+AGG + chr5.3:63245462-63245481 None:intergenic 30.0%
! TAGTCCAAATCCCAAATTTT+AGG + chr5.3:63240793-63240812 None:intergenic 30.0%
! TCTATGTTTTCAGCAATAGA+AGG - chr5.3:63244356-63244375 MS.gene064518:intron 30.0%
! TTGAACTTACAAAGTTCTAG+TGG + chr5.3:63243917-63243936 None:intergenic 30.0%
! TTTAGTATGGAGTGTTCAAA+TGG + chr5.3:63242325-63242344 None:intergenic 30.0%
! TTTTGTTGCTGTATTTCAAC+AGG - chr5.3:63245890-63245909 MS.gene064518:intron 30.0%
!! AATGTATATCGTTTCTGGTT+AGG + chr5.3:63241735-63241754 None:intergenic 30.0%
!! AATGTTAGAAGGTTAGTCTT+AGG + chr5.3:63243515-63243534 None:intergenic 30.0%
!! ATGTTAGAAGGTTAGTCTTA+GGG + chr5.3:63243514-63243533 None:intergenic 30.0%
!! GTTTCTGGTTAGGATTTATA+TGG + chr5.3:63241725-63241744 None:intergenic 30.0%
!! TCACATCTCAAGTTTTGATA+TGG - chr5.3:63244231-63244250 MS.gene064518:intron 30.0%
!!! ATTTTTTCCACCATAGCTTT+GGG + chr5.3:63241758-63241777 None:intergenic 30.0%
!!! GCTTAACTTTTTTCTGTGTA+CGG - chr5.3:63243016-63243035 MS.gene064518:intron 30.0%
!!! TATTTTTTCCACCATAGCTT+TGG + chr5.3:63241759-63241778 None:intergenic 30.0%
!!! TCATACAATTTTGATGACGT+TGG + chr5.3:63243746-63243765 None:intergenic 30.0%
AAAGGGGTAAATTATGCATC+TGG - chr5.3:63244972-63244991 MS.gene064518:intron 35.0%
AAGAGAAATATGGACACTAG+TGG - chr5.3:63244077-63244096 MS.gene064518:intron 35.0%
AATGAAGCCACATACTTCAT+TGG - chr5.3:63245220-63245239 MS.gene064518:intron 35.0%
ACAAGCCAAAAAAAGAAGAG+AGG - chr5.3:63242979-63242998 MS.gene064518:intron 35.0%
AGAAGCAATCACAGGAAAAT+TGG - chr5.3:63245171-63245190 MS.gene064518:intron 35.0%
AGAGTGAAAAAATTGGGAAC+TGG - chr5.3:63242080-63242099 MS.gene064518:intron 35.0%
AGATATCAACTTGACTACGA+AGG - chr5.3:63241828-63241847 MS.gene064518:intron 35.0%
AGTGATAAAAAGGTGGTGTT+CGG - chr5.3:63242364-63242383 MS.gene064518:intron 35.0%
ATCATGAGTAGTTCAGTTCT+TGG + chr5.3:63245502-63245521 None:intergenic 35.0%
ATGAAGCCACATACTTCATT+GGG - chr5.3:63245221-63245240 MS.gene064518:intron 35.0%
ATGCAAGAACGCGTAAATAT+AGG + chr5.3:63244801-63244820 None:intergenic 35.0%
CAAAAGGACAAGATCATACA+TGG + chr5.3:63241357-63241376 None:intergenic 35.0%
CAAAGAGTTAAATCCAAACG+AGG - chr5.3:63245636-63245655 MS.gene064518:intron 35.0%
CGGAAAATTAGTTGTTGAAG+TGG - chr5.3:63243194-63243213 MS.gene064518:intron 35.0%
GAAGCAATCACAGGAAAATT+GGG - chr5.3:63245172-63245191 MS.gene064518:intron 35.0%
GATATACATTCCCAAAGCTA+TGG - chr5.3:63241745-63241764 MS.gene064518:CDS 35.0%
GCATAATGTAAGGCTTAATG+TGG + chr5.3:63245829-63245848 None:intergenic 35.0%
GGTGATTCTTTAACAGATGT+AGG - chr5.3:63244492-63244511 MS.gene064518:intron 35.0%
TAATTTCTTGCAGCCGTTTA+TGG - chr5.3:63245385-63245404 MS.gene064518:intron 35.0%
TACATTCTCTAATGTAGCTG+AGG - chr5.3:63240225-63240244 MS.gene064518:CDS 35.0%
TATGGAATTGACTATAGTGG+TGG - chr5.3:63244564-63244583 MS.gene064518:intron 35.0%
TGTTTAAGTCAATTGGGAGT+TGG + chr5.3:63244160-63244179 None:intergenic 35.0%
TTACACTTCATTCACCTTAG+AGG - chr5.3:63242762-63242781 MS.gene064518:intron 35.0%
TTGGAAATAATACGACGCTT+TGG + chr5.3:63243727-63243746 None:intergenic 35.0%
TTGGGAATGTATATCGTTTC+TGG + chr5.3:63241740-63241759 None:intergenic 35.0%
TTGTATGAACAAAGCAGGTA+TGG - chr5.3:63243758-63243777 MS.gene064518:intron 35.0%
TTTACCAATGGAAGGACTAT+TGG - chr5.3:63244603-63244622 MS.gene064518:intron 35.0%
TTTCCTACCTCATATATTGG+TGG + chr5.3:63243856-63243875 None:intergenic 35.0%
TTTGGTACGTATACTACCAT+TGG - chr5.3:63242907-63242926 MS.gene064518:intron 35.0%
! AAAATGGTTTTTCACGGACT+TGG - chr5.3:63245591-63245610 MS.gene064518:intron 35.0%
! ACAAAGTTCTAGTGGTGTTT+GGG + chr5.3:63243909-63243928 None:intergenic 35.0%
! CATAATTTACCCCTTTGAGA+AGG + chr5.3:63244968-63244987 None:intergenic 35.0%
! GCAAAGACAAGTTTTGCATT+TGG + chr5.3:63245747-63245766 None:intergenic 35.0%
! GCAACCTAAAATTTGGGATT+TGG - chr5.3:63240786-63240805 MS.gene064518:intron 35.0%
! GTTGCATGTATCTTTTCACT+AGG - chr5.3:63244429-63244448 MS.gene064518:intron 35.0%
! TACAAAGTTCTAGTGGTGTT+TGG + chr5.3:63243910-63243929 None:intergenic 35.0%
! TCAGTTAGGAGCACAAAAAA+TGG - chr5.3:63245575-63245594 MS.gene064518:intron 35.0%
! TCTATTTCTTCTCTCTCTGA+TGG + chr5.3:63242936-63242955 None:intergenic 35.0%
! TGGTGTTTGGGGTTAATTAA+GGG + chr5.3:63243897-63243916 None:intergenic 35.0%
! TTTTGGCAGAAAAACATGCA+TGG + chr5.3:63241092-63241111 None:intergenic 35.0%
! TTTTTGTGTGATCCTTGAAC+AGG - chr5.3:63240385-63240404 MS.gene064518:intron 35.0%
!!! AGGACTTTTTTTTACTGCCA+AGG + chr5.3:63240587-63240606 None:intergenic 35.0%
!!! ATTTTTTTTTGAGGGGACCT+TGG + chr5.3:63241437-63241456 None:intergenic 35.0%
!!! TTAAGTGCTTAAGGGCATTT+TGG + chr5.3:63241209-63241228 None:intergenic 35.0%
AAATTATGCATCTGGTGGAG+CGG - chr5.3:63244980-63244999 MS.gene064518:intron 40.0%
AATCGCTTTCTTGTCCCAAA+AGG + chr5.3:63242587-63242606 None:intergenic 40.0%
ACCTATCCCAATGAAGTATG+TGG + chr5.3:63245230-63245249 None:intergenic 40.0%
AGACAAACTTGGAAGCAAGT+TGG - chr5.3:63243144-63243163 MS.gene064518:intron 40.0%
AGGAAAGTTAGATTTGGCCA+AGG + chr5.3:63244541-63244560 None:intergenic 40.0%
AGTCTCTCCACCAATATATG+AGG - chr5.3:63243846-63243865 MS.gene064518:intron 40.0%
AGTGTTCAAATGGTTAGAGG+TGG + chr5.3:63242315-63242334 None:intergenic 40.0%
ATACATTCCCAAAGCTATGG+TGG - chr5.3:63241748-63241767 MS.gene064518:CDS 40.0%
ATCACCAATAGTCCTTCCAT+TGG + chr5.3:63244610-63244629 None:intergenic 40.0%
CAAAATATATGCCGCTCTCT+AGG + chr5.3:63243323-63243342 None:intergenic 40.0%
CATGCAACAAAAACAAGCCT+TGG + chr5.3:63244417-63244436 None:intergenic 40.0%
CTGGAAGATTTACCAATGGA+AGG - chr5.3:63244595-63244614 MS.gene064518:intron 40.0%
GCTACTGGAAGATTTACCAA+TGG - chr5.3:63244591-63244610 MS.gene064518:intron 40.0%
GGAACTAATCAAAGCTACCA+TGG - chr5.3:63244112-63244131 MS.gene064518:intron 40.0%
GTACTCTTGCAGTACTACAA+AGG + chr5.3:63241532-63241551 None:intergenic 40.0%
GTGACTTTCTCGTGTATGTT+CGG - chr5.3:63244753-63244772 MS.gene064518:intron 40.0%
TACCAGAGACTGTATCAGTT+AGG - chr5.3:63245561-63245580 MS.gene064518:intron 40.0%
TCTCCACCAATATATGAGGT+AGG - chr5.3:63243850-63243869 MS.gene064518:intron 40.0%
TGCAATGTAGACACAAGCAT+TGG - chr5.3:63245938-63245957 MS.gene064518:intron 40.0%
TGGTAAATCTTCCAGTAGCT+TGG + chr5.3:63244590-63244609 None:intergenic 40.0%
TGTAAGGTGTGATGAAAGCA+TGG + chr5.3:63242399-63242418 None:intergenic 40.0%
! ATAGCATTTGCTGCATCTGA+TGG + chr5.3:63246034-63246053 None:intergenic 40.0%
! CAAAGTTCTAGTGGTGTTTG+GGG + chr5.3:63243908-63243927 None:intergenic 40.0%
! CATGGTGAGTGTCATTGAAA+AGG + chr5.3:63241339-63241358 None:intergenic 40.0%
! CATTTTGCAGCATCAAAGCT+AGG - chr5.3:63244894-63244913 MS.gene064518:intron 40.0%
! CTTTAAACATTGGCCTCGTT+TGG + chr5.3:63245652-63245671 None:intergenic 40.0%
! GGCATGAAGCACAACATTTT+TGG + chr5.3:63241109-63241128 None:intergenic 40.0%
! GGTCATCTCTTTGCTTCTTT+TGG - chr5.3:63240201-63240220 MS.gene064518:CDS 40.0%
! GGTGTTTGGGGTTAATTAAG+GGG + chr5.3:63243896-63243915 None:intergenic 40.0%
! GTAAGGTGTGATGAAAGCAT+GGG + chr5.3:63242398-63242417 None:intergenic 40.0%
! GTGGTGTTTGGGGTTAATTA+AGG + chr5.3:63243898-63243917 None:intergenic 40.0%
! GTTTTGCATTTGGAAGACCA+TGG + chr5.3:63245737-63245756 None:intergenic 40.0%
! TGGAGTGTTCAAATGGTTAG+AGG + chr5.3:63242318-63242337 None:intergenic 40.0%
!! AAAGTTGGAAGGCTAGTCTT+CGG + chr5.3:63243589-63243608 None:intergenic 40.0%
!! AATGTAGACACAAGCATTGG+AGG - chr5.3:63245941-63245960 MS.gene064518:intron 40.0%
!! ACCAACTTTTGGGGAAAGAA+GGG - chr5.3:63242555-63242574 MS.gene064518:intron 40.0%
!! GGCACTCATTTTTGTGAATG+AGG + chr5.3:63243385-63243404 None:intergenic 40.0%
!! GTTGGTTTGTGAGAAACTTG+AGG - chr5.3:63243080-63243099 MS.gene064518:intron 40.0%
!! TACCAACTTTTGGGGAAAGA+AGG - chr5.3:63242554-63242573 MS.gene064518:intron 40.0%
!! TTCACGAGTGCCATTTAGTA+TGG + chr5.3:63242338-63242357 None:intergenic 40.0%
!!! AAAGAAGGGCATTTGCCTTT+TGG - chr5.3:63242569-63242588 MS.gene064518:intron 40.0%
!!! AAGAAGGGCATTTGCCTTTT+GGG - chr5.3:63242570-63242589 MS.gene064518:intron 40.0%
AAAAGGTGGTGTTCGGAGTT+TGG - chr5.3:63242371-63242390 MS.gene064518:intron 45.0%
AATGTCGATGCCCTTCTCAA+AGG - chr5.3:63244954-63244973 MS.gene064518:intron 45.0%
AATTATGCATCTGGTGGAGC+GGG - chr5.3:63244981-63245000 MS.gene064518:intron 45.0%
ATACACCAGGAGGAACACAA+AGG + chr5.3:63241130-63241149 None:intergenic 45.0%
ATGTCGATGCCCTTCTCAAA+GGG - chr5.3:63244955-63244974 MS.gene064518:intron 45.0%
CAAAGAGATGACCACCAAGA+TGG + chr5.3:63240194-63240213 None:intergenic 45.0%
CACAAAAATGAGTGCCCCAA+GGG - chr5.3:63243389-63243408 MS.gene064518:intron 45.0%
CGCGTTAAAGTCACGTTTGT+CGG - chr5.3:63242808-63242827 MS.gene064518:intron 45.0%
CTCCTAACTGATACAGTCTC+TGG + chr5.3:63245566-63245585 None:intergenic 45.0%
CTCTCTCTGATGGTTTCCAA+TGG + chr5.3:63242926-63242945 None:intergenic 45.0%
GAGCAACGATATGTACACCT+TGG + chr5.3:63241050-63241069 None:intergenic 45.0%
GAGCAAGCATGACACAAATC+AGG - chr5.3:63243102-63243121 MS.gene064518:intron 45.0%
GCCACATACTTCATTGGGAT+AGG - chr5.3:63245226-63245245 MS.gene064518:intron 45.0%
GGGGTAAATTATGCATCTGG+TGG - chr5.3:63244975-63244994 MS.gene064518:intron 45.0%
GTCGTCCGATCTTGAATAAG+TGG - chr5.3:63240848-63240867 MS.gene064518:CDS 45.0%
GTGATCCTTGAACAGGCTTA+TGG - chr5.3:63240392-63240411 MS.gene064518:intron 45.0%
GTTCAAATGGTTAGAGGTGG+TGG + chr5.3:63242312-63242331 None:intergenic 45.0%
TCAACTTGACTACGAAGGAG+TGG - chr5.3:63241833-63241852 MS.gene064518:intron 45.0%
TCACAAAAATGAGTGCCCCA+AGG - chr5.3:63243388-63243407 MS.gene064518:intron 45.0%
TCTCACTATGTCACGCATCA+TGG + chr5.3:63240739-63240758 None:intergenic 45.0%
TGTGTTCCTCCTGGTGTATA+TGG - chr5.3:63241131-63241150 MS.gene064518:CDS 45.0%
TGTTGGCCATCTGCCATAAA+CGG + chr5.3:63245401-63245420 None:intergenic 45.0%
TTGTTGCCATATACACCAGG+AGG + chr5.3:63241140-63241159 None:intergenic 45.0%
TTTGTCCTTGCTACAACAGC+TGG - chr5.3:63241165-63241184 MS.gene064518:intron 45.0%
! CACTAGTGGCATTGAAGTGA+AGG - chr5.3:63244091-63244110 MS.gene064518:intron 45.0%
! TATGGGCAAAGCATCCTCTA+AGG + chr5.3:63242779-63242798 None:intergenic 45.0%
! TGCTTGTTGCCATATACACC+AGG + chr5.3:63241143-63241162 None:intergenic 45.0%
! TGTGATGGAATACAACCGAG+TGG + chr5.3:63245618-63245637 None:intergenic 45.0%
! TTTGGGATTTGGACTACACG+TGG - chr5.3:63240797-63240816 MS.gene064518:intron 45.0%
!! TGAGGCACTGACAAATAAGC+TGG + chr5.3:63244933-63244952 None:intergenic 45.0%
!!! AGAAGGGCATCGACATTTTG+AGG + chr5.3:63244951-63244970 None:intergenic 45.0%
!! ACTATTAAATAATAAATTAA+AGG - chr5.3:63242671-63242690 MS.gene064518:intron 5.0%
!!! AAAATTAATTTAAACATTTT+TGG - chr5.3:63243266-63243285 MS.gene064518:intron 5.0%
!!! AAATTAATTTAAACATTTTT+GGG - chr5.3:63243267-63243286 MS.gene064518:intron 5.0%
!!! TATTAAAAAAAAAAAAGTAT+AGG + chr5.3:63242479-63242498 None:intergenic 5.0%
AACAGCTGGAAGACACAGGA+AGG - chr5.3:63241179-63241198 MS.gene064518:intron 50.0%
ACGTTGCAATGGCTCCATCT+TGG - chr5.3:63240177-63240196 MS.gene064518:CDS 50.0%
CACGTCCATAAGCCTGTTCA+AGG + chr5.3:63240400-63240419 None:intergenic 50.0%
CGTGCAAAACTTCGTCCTCA+AGG - chr5.3:63240416-63240435 MS.gene064518:intron 50.0%
CTACAACAGCTGGAAGACAC+AGG - chr5.3:63241175-63241194 MS.gene064518:intron 50.0%
CTTCTTATGGTGTGCCCTTG+GGG + chr5.3:63243406-63243425 None:intergenic 50.0%
GCCCTTCTTTCCCCAAAAGT+TGG + chr5.3:63242559-63242578 None:intergenic 50.0%
GCGGGAATTCTCAATGACAC+AGG - chr5.3:63244999-63245018 MS.gene064518:intron 50.0%
GCTTCTTATGGTGTGCCCTT+GGG + chr5.3:63243407-63243426 None:intergenic 50.0%
GTCTTCCAGCTGTTGTAGCA+AGG + chr5.3:63241173-63241192 None:intergenic 50.0%
TATAGTGGTGGCCAAGCTAC+TGG - chr5.3:63244576-63244595 MS.gene064518:intron 50.0%
TCATGCCTTTGTGTTCCTCC+TGG - chr5.3:63241122-63241141 MS.gene064518:CDS 50.0%
TGTCGATGCCCTTCTCAAAG+GGG - chr5.3:63244956-63244975 MS.gene064518:intron 50.0%
TTGCAATGGCTCCATCTTGG+TGG - chr5.3:63240180-63240199 MS.gene064518:CDS 50.0%
TTGCAGCCGTTTATGGCAGA+TGG - chr5.3:63245392-63245411 MS.gene064518:intron 50.0%
! CAAATGGTTAGAGGTGGTGG+TGG + chr5.3:63242309-63242328 None:intergenic 50.0%
! TTTCACGGACTTGGTCCACT+CGG - chr5.3:63245600-63245619 MS.gene064518:intron 50.0%
!! GGCACTGACAAATAAGCTGG+TGG + chr5.3:63244930-63244949 None:intergenic 50.0%
!!! AGGTGGTGGTGGTGTTTTCA+TGG + chr5.3:63242298-63242317 None:intergenic 50.0%
ACTTGCCTACGTACCCCCAA+TGG - chr5.3:63242211-63242230 MS.gene064518:intron 55.0%
ATATGCCGCTCTCTAGGCCT+AGG + chr5.3:63243317-63243336 None:intergenic 55.0%
GGCTTCTTATGGTGTGCCCT+TGG + chr5.3:63243408-63243427 None:intergenic 55.0%
TAGACCCTGCCTTGGCCATT+GGG + chr5.3:63242229-63242248 None:intergenic 55.0%
TCAAGCCTAGGCCTAGAGAG+CGG - chr5.3:63243309-63243328 MS.gene064518:intron 55.0%
TTAGACCCTGCCTTGGCCAT+TGG + chr5.3:63242230-63242249 None:intergenic 55.0%
!! AGAAGCGTTAGACCCTGCCT+TGG + chr5.3:63242237-63242256 None:intergenic 55.0%
AGACCCTGCCTTGGCCATTG+GGG + chr5.3:63242228-63242247 None:intergenic 60.0%
CTACGTACCCCCAATGGCCA+AGG - chr5.3:63242217-63242236 MS.gene064518:intron 60.0%
TACCCCCAATGGCCAAGGCA+GGG - chr5.3:63242222-63242241 MS.gene064518:intron 60.0%
! CTTGGCCATTGGGGGTACGT+AGG + chr5.3:63242219-63242238 None:intergenic 60.0%
! GAAGGGCTAGGTGCTGCAGA+TGG + chr5.3:63246097-63246116 None:intergenic 60.0%
! GGAAGCAAGTTGGACGCGTG+CGG - chr5.3:63243154-63243173 MS.gene064518:intron 60.0%
GACCCTGCCTTGGCCATTGG+GGG + chr5.3:63242227-63242246 None:intergenic 65.0%
GTACCCCCAATGGCCAAGGC+AGG - chr5.3:63242221-63242240 MS.gene064518:intron 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 63240169 63246123 63240169 ID=MS.gene064518
chr5.3 mRNA 63240169 63246123 63240169 ID=MS.gene064518.t1;Parent=MS.gene064518
chr5.3 exon 63246046 63246123 63246046 ID=MS.gene064518.t1.exon1;Parent=MS.gene064518.t1
chr5.3 CDS 63246046 63246123 63246046 ID=cds.MS.gene064518.t1;Parent=MS.gene064518.t1
chr5.3 exon 63245855 63245885 63245855 ID=MS.gene064518.t1.exon2;Parent=MS.gene064518.t1
chr5.3 CDS 63245855 63245885 63245855 ID=cds.MS.gene064518.t1;Parent=MS.gene064518.t1
chr5.3 exon 63241668 63241841 63241668 ID=MS.gene064518.t1.exon3;Parent=MS.gene064518.t1
chr5.3 CDS 63241668 63241841 63241668 ID=cds.MS.gene064518.t1;Parent=MS.gene064518.t1
chr5.3 exon 63241261 63241388 63241261 ID=MS.gene064518.t1.exon4;Parent=MS.gene064518.t1
chr5.3 CDS 63241261 63241388 63241261 ID=cds.MS.gene064518.t1;Parent=MS.gene064518.t1
chr5.3 exon 63241045 63241171 63241045 ID=MS.gene064518.t1.exon5;Parent=MS.gene064518.t1
chr5.3 CDS 63241045 63241171 63241045 ID=cds.MS.gene064518.t1;Parent=MS.gene064518.t1
chr5.3 exon 63240814 63240926 63240814 ID=MS.gene064518.t1.exon6;Parent=MS.gene064518.t1
chr5.3 CDS 63240814 63240926 63240814 ID=cds.MS.gene064518.t1;Parent=MS.gene064518.t1
chr5.3 exon 63240476 63240725 63240476 ID=MS.gene064518.t1.exon7;Parent=MS.gene064518.t1
chr5.3 CDS 63240476 63240725 63240476 ID=cds.MS.gene064518.t1;Parent=MS.gene064518.t1
chr5.3 exon 63240169 63240380 63240169 ID=MS.gene064518.t1.exon8;Parent=MS.gene064518.t1
chr5.3 CDS 63240169 63240380 63240169 ID=cds.MS.gene064518.t1;Parent=MS.gene064518.t1
Gene Sequence

>MS.gene064518

ATGGCAGCACGTTGCAATGGCTCCATCTTGGTGGTCATCTCTTTGCTTCTTTTGGTTACATTCTCTAATGTAGCTGAGGTACATTAATTAATAATTATGACAAAAACCATTTACTATATGATTGGATCAATATGATTAATTGATTATCTAGTATGCAATTATCAATTAGTTAACAATGTATACAAGTTCAATTGTTCTAATATTTCAAAACTTTGGTTTTTGTGTGATCCTTGAACAGGCTTATGGACGTGCAAAACTTCGTCCTCAAGGTATATATATGCAATTGATGTTTTTGTTAATTGTGATTTGTGTCTATAAGCAAATTTTGGGTATTCTATTTTTTGTTTTTGCTAAGAGCAATTTTAGCTCATGTCCTCCATTAAAATAAATTTTGGCAGTTTTATAAGGAATTTTTCCTTGGCAGTAAAAAAAAGTCCTCGCTCAACATTAATAATTTAATTTGAAACAAAACTATGTACAATTAAAAAAGTATAAAAGTATAACTTGTTTAAAAATTGGTTAAAATGTATACTATGACTTTTAGAGAAAATGCTGCTAATCGATAAACCATGATGCGTGACATAGTGAGAGTCACTTACTCACTTAATAGTGTATAAGCAACCTAAAATTTGGGATTTGGACTACACGTGGTTATTGCGTGCTGCAGTTGTTGATTTCAGTCGTCCGATCTTGAATAAGTGGTGAAAATTATTGCGTGCTGCAGTTGTTGATTTCAGTCGTCCGATCTTGAATAAGTGGTGAAAATTATTTAGTAATACTTGGTGAATGTTAATATTAACTATGAATTTTTTTTGTTAATGTTAATTTCTTTGTTGATTTGCTAATAGTGTGAACAAATTAATGAAACAGATTGTAAACCAAGGTGTACATATCGTTGCTCTGCAACTTCACACAAGAAACCATGCATGTTTTTCTGCCAAAAATGTTGTGCTTCATGCCTTTGTGTTCCTCCTGGTGTATATGGCAACAAGCAAGTTTGTCCTTGCTACAACAGCTGGAAGACACAGGAAGGAAAACCAAAATGCCCTTAAGCACTTAATTTCTTCAAACAAATCAATAATTAAGCAATGTTGTCCTTATTTATTTTTCAAATTTGGAGATGCTAATTGTTTTCATACCTATATTGTATGAAAGGTGAGTGATTTTCCTTTTCAATGACACTCACCATGTATGATCTTGTCCTTTTGACCATAATATATGAAGGTTGAAAGGCATTCTTAAATTTTGGTATCTAGTATTTTGTACCAAGGTCCCCTCAAAAAAAAATTATTGTGTGCCTTGGTTTTGTTTTTCAATGTTGTCTCTTATCTATACAATAAATAAAAGCAATGATGAGTTGCCTTTGTAGTACTGCAAGAGTACAAGTGCATATTTAGTTTAATTGTACTGTGTTATTTGAATATCATATTGGGGACACCAAATATAATATCATATACTCATTAGCTCTAGCTATCTCTTATTTGCTTCTCTATAAGCTTAATCGCATGTTCTCTTTATTTATATCTTTTGGCTATTATATGCTAACTGTTCTACCATATAAATCCTAACCAGAAACGATATACATTCCCAAAGCTATGGTGGAAAAAATAGTGTTTAGAGACTATGATAATATCTTGTTCTTTATTTGATCTAATTGTAAGATATCAACTTGACTACGAAGGAGTGGTTATTACTACTTCCCCATCTAAATTAAATGTCACCACTTATAACAAAAGTCATGATTTCTTTGACAATTTTAGATCATGGTTTTCACTATAAGATTTAGGCCACAATTGTGTAAACTTTGTTTATACATGAGGTTGAGGACACAATTATACGTATAAACAAATTGTATGTACACATTATAATTCTAAATGTTGCCTATAACGTGTGTATAAAATTTGAGAAATGAGAGTGAAAAAATTGGGAACTGGATCAATAAAAATAATGAAGAATAAAAAATGGTGAAATGGAAATTTTGAAAAATGTGGAGATGGGAGAATTCTGAATTAAGCATAAAGATAAGAAAAAAATCTTACATAACTTGCCTACGTACCCCCAATGGCCAAGGCAGGGTCTAACGCTTCTTAAAAAAAGGCATAGATTTGGAGTAAAGAATGTTAATTCCATGAAAACACCACCACCACCTCTAACCATTTGAACACTCCATACTAAATGGCACTCGTGAATTTACAAGTGATAAAAAGGTGGTGTTCGGAGTTTGGACCCATGCTTTCATCACACCTTACACAGTAAGCTATATGATTGTCAACAACAAATCTATTTTTAATGAAAAAATTGCTTAAACCTATACTTTTTTTTTTTTAATAAAAAAAAGGCTTACACTTGATACGAGCAATGCAGAGATTATAGTAAAAATATTGTTACCAACTTTTGGGGAAAGAAGGGCATTTGCCTTTTGGGACAAGAAAGCGATTGCTTCAAATAAATAATGTTTTTATTATCTCTAAATTGAACGGCATGTGATGTGAGTAAATGTCAACTATTAAATAATAAATTAAAGGTAGATATAATAGGTACATCGTAACGAATCATGAGTTTGTTACAATAATAACCATTGATTTTTTTCATTTTACACTTCATTCACCTTAGAGGATGCTTTGCCCATATTTACATAACGCGTTAAAGTCACGTTTGTCGGTTCATAAAATTTCATTAATTGTTTTGACTAATTCTCTCACATTCGCTTTCAAATTAACATTTGTATCAACTATGTTTTTGGTACGTATACTACCATTGGAAACCATCAGAGAGAGAAGAAATAGAGAAGAAATGAATAACTCGTTAACACAAGCCAAAAAAAGAAGAGAGGAAAAATAATCAATAGCTTAACTTTTTTCTGTGTACGGAATAAACTATGCGAGTTTTCTATTTATAGAGAAATTTTGTAGTTGGTTTGTGAGAAACTTGAGGAGCAAGCATGACACAAATCAGGTCAAGTAACAAAATAGTTCAGACAAACTTGGAAGCAAGTTGGACGCGTGCGGATAATATTAGAAAGAACCGGAAAATTAGTTGTTGAAGTGGATAGACAAAATAATGTGTTTATTAAGAAAGCACTTTCAAATAATGTTAAAAAATTAATTTAAACATTTTTGGGTAATAAAAAATGTATATCATCAAGCCTAGGCCTAGAGAGCGGCATATATTTTGATCGCATGTGTAGTATAAATATATTTTTGTGAGTGCTTACCTCATTCACAAAAATGAGTGCCCCAAGGGCACACCATAAGAAGCCTTTTTTCTTTTGTATAAACACTATCAATATGTGTTTTCTCCGATGTGAAACTACCATTTTTTTCAATTCAAACAAGTTCAAAGCCCTAAGACTAACCTTCTAACATTCAACTAATTTCATACCATATGTTCCAACAAAAAATATAGGTTTATCTAAGTCCGAAGACTAGCCTTCCAACTTTCAACTAATTTCATACCATGTGTTTCAAAAAAAAAATATAGGCTTAAACTTTGGCATGTGACAAAATACTTTCAAAAAAATATTTTTAAAGTAAGACTTTTTGTTGAAGTAATTGGCCAAAGCGTCGTATTATTTCCAACGTCATCAAAATTGTATGAACAAAGCAGGTATGGCAATATAGCCAAAAAGTTCTTATTTGGTTCTTTGTAAAAATTGGCTTGATTTTGTCATTTTTCAAAGTCTCTCCACCAATATATGAGGTAGGAAATCAACCAAACTATATATCCCCTTAATTAACCCCAAACACCACTAGAACTTTGTAAGTTCAAGTTTAATTTAAGTCTTCCATTACTTTTAATAGACAGTATAGTATAGTTGGTAAACAATGATATTGAATATTTGAATGCAATATATATTGGCATCACCCCTTGACAAATTTAGTTTGCTTGTATTTCAATTTACTTGCATGAAGAGAAATATGGACACTAGTGGCATTGAAGTGAAGGAACTAATCAAAGCTACCATGGCTAATTCAATTATCTGAGTTGGCCAACTCCCAATTGACTTAAACACCTACTTCTATGATTTTATTGATTCAGCTAGATTAGAAAAATCATATAGTTTCACATCTCAAGTTTTGATATGGTTTAGAAAATAACCACCAAACATACATAATTGCAAGATTGAAACAACAGTGAGTAGCACAATGACTTTAATGTATACTACTACTATAAAACTCATATTCATTTCTATGTTTTCAGCAATAGAAGGATTATTAGAAGGTGGAAACATTCAAAATGTTAATACCAAGGCTTGTTTTTGTTGCATGTATCTTTTCACTAGGTGAAATTGCTTTAGCAGCTAAGATTGTTACCTATATCTTTGGTGATTCTTTAACAGATGTAGGGAACAATAATTTTCTACAATATTCCTTGGCCAAATCTAACTTTCCTTTTTATGGAATTGACTATAGTGGTGGCCAAGCTACTGGAAGATTTACCAATGGAAGGACTATTGGTGATATCATATGTAACTTCTTAATCTCTAACTTTTCTTTCCTTTTTCTTTTATTGAAAATTAATAAACTGTGCAAGGAGAAATGCTTATTGTTAAGAGATGAGTATGATATGAAATGCAAGAATAGCGTGACTTTCTCGTGTATGTTCGGCAAAAATTTGATTGGTTAACATCCTATATTTACGCGTTCTTGCATTTCGTGAAGAAATCATTCGTAAAAAGTAGCAGTGATGTTATGCAATACATGTTTTGTTGGTTTAATTTTATGTCATTTTGCAGCATCAAAGCTAGGTATCGAATCACCACCAGCTTATTTGTCAGTGCCTCAAAATGTCGATGCCCTTCTCAAAGGGGTAAATTATGCATCTGGTGGAGCGGGAATTCTCAATGACACAGGACTTTACTTTGTAAGCAGAACATCTTCAAATACTCAAGATTCAAATTAAAACTTTAGCGTATATTTGTCTAAGTTATGTTATGTCTTGTATCTCTTCAGATTCAGAGACTGACTCTTGATGATCAAATAAAAAGTTTCAAGAAAACTAAAGAAGCAATCACAGGAAAATTGGGTGAAGCTGCTGCTAACAAGCATTTCAATGAAGCCACATACTTCATTGGGATAGGTAATACTTCTTCACACTCAAAACACTATTCTCTATCAGAATTATTTTGAATGTTTATGATGACTTCAATTCTACAAATATCATATATAATTGTTACTAGTAAACTACATTTATGCAGGCAGCAATGATTATGTCAATAATTTCTTGCAGCCGTTTATGGCAGATGGCCAACAATATACTCATGATGAGTTCATAGAGCTCTTAATCTCAACCTTAGATCAACAACTTAAGGTAAAAGAAAATGAAATATTCCAAGAACTGAACTACTCATGATGTGTTTCACTATTTACTTTGTACTAAACTTATTGAATTATACCAGAGACTGTATCAGTTAGGAGCACAAAAAATGGTTTTTCACGGACTTGGTCCACTCGGTTGTATTCCATCACAAAGAGTTAAATCCAAACGAGGCCAATGTTTAAAGCAAGTTAATGAATGGATTCAACAATTCAACTCTGAAGTACAGAAGCTAATCATCAAACTAAACCATGGTCTTCCAAATGCAAAACTTGTCTTTGCAGACACCTATCCTTTAGTTCTTGACTTAATCGATAATCCATCTACATATGGTAAAATTTCCACATTAAGCCTTACATTATGCTTAAGATTATTTAATTATATTCAACAACAATGCACTCATTTTTTTGTTGCTGTATTTCAACAGGTTTTAAAGTTTCAAATACATCTTGTTGCAATGTAGACACAAGCATTGGAGGTTTATGCTTACCAAACTCAAAGTTATGCAAAAACCGGAATGAATATGTATTTTGGGATGCATTTCATCCATCAGATGCAGCAAATGCTATTCTAGCAGAGAAATTCTTCTCTAGTCTTTTCTCATCAGCTCCATCTGCAGCACCTAGCCCTTCCCCTTAA
Protein sequence

>MS.gene064518.t1

MAARCNGSILVVISLLLLVTFSNVAEAYGRAKLRPQGEIALAAKIVTYIFGDSLTDVGNNNFLQYSLAKSNFPFYGIDYSGGQATGRFTNGRTIASKLGIESPPAYLSVPQNVDALLKGVNYASGGAGILNDTGLYFIQRLTLDDQIKSFKKTKEAITGKLGEAAANKHFNEATYFIGIGSNDYVNNFLQPFMADGQQYTHDEFIELLISTLDQQLKRLYQLGAQKMVFHGLGPLGCIPSQRVKSKRGQCLKQVNEWIQQFNSEVQKLIIKLNHGLPNAKLVFADTYPLVLDLIDNPSTYGFKVSNTSCCNVDTSIGGLCLPNSKLCKNRNEYVFWDAFHPSDAANAILAEKFFSSLFSSAPSAAPSPSP