Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064731.t1 | XP_003603733.1 | 97.2 | 387 | 10 | 1 | 1 | 387 | 1 | 386 | 4.10E-224 | 786.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064731.t1 | Q0J0A4 | 82.5 | 366 | 63 | 1 | 23 | 387 | 49 | 414 | 2.4e-188 | 659.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064731.t1 | G7J4P3 | 97.2 | 387 | 10 | 1 | 1 | 387 | 1 | 386 | 3.0e-224 | 786.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene63514 | MS.gene064731 | PPI |
| MS.gene56256 | MS.gene064731 | PPI |
| MS.gene51627 | MS.gene064731 | PPI |
| MS.gene009458 | MS.gene064731 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064731.t1 | MTR_3g113160 | 97.158 | 387 | 10 | 1 | 1 | 387 | 1 | 386 | 0.0 | 782 |
| MS.gene064731.t1 | MTR_1g023340 | 80.000 | 380 | 71 | 2 | 9 | 387 | 4 | 379 | 0.0 | 647 |
| MS.gene064731.t1 | MTR_1g023340 | 78.841 | 345 | 68 | 2 | 9 | 352 | 17 | 357 | 0.0 | 577 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064731.t1 | AT4G24160 | 81.793 | 368 | 65 | 2 | 19 | 384 | 48 | 415 | 0.0 | 641 |
| MS.gene064731.t1 | AT4G24160 | 83.972 | 287 | 45 | 1 | 19 | 304 | 48 | 334 | 0.0 | 512 |
Find 100 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGTACAACACTTAATTT+TGG | 0.224490 | 3.4:-97609856 | MS.gene064731:CDS |
| ACTGACCTTGAGCGCGTATT+TGG | 0.229778 | 3.4:+97609985 | None:intergenic |
| CCTACGCTTGTTATGGTTCA+TGG | 0.238094 | 3.4:-97610413 | MS.gene064731:CDS |
| TAGTACTACTTACTTGATAA+TGG | 0.269614 | 3.4:+97610635 | None:intergenic |
| AGGTTCCATGTGAAATTATC+AGG | 0.270422 | 3.4:-97607180 | MS.gene064731:CDS |
| TTAGTAACAAACTCAGTCTT+TGG | 0.271154 | 3.4:+97609801 | None:intergenic |
| ATACTGCTTGGACATTCTTT+TGG | 0.272412 | 3.4:-97610022 | MS.gene064731:CDS |
| GTGGCAGAGGTTTAGGTCCT+TGG | 0.277706 | 3.4:-97608541 | MS.gene064731:intron |
| GAGCCGTTCTGAACCATCTA+TGG | 0.283949 | 3.4:-97609758 | MS.gene064731:CDS |
| TGCATTTGTGGCAGAGGTTT+AGG | 0.300561 | 3.4:-97608548 | MS.gene064731:intron |
| TGGCAGAGGTTTAGGTCCTT+GGG | 0.303425 | 3.4:-97608540 | MS.gene064731:intron |
| TCATATGCTTGCGAGCTTCT+TGG | 0.307279 | 3.4:+97607203 | None:intergenic |
| TCATGGATACGCTGCTTCTC+AGG | 0.312153 | 3.4:-97610396 | MS.gene064731:CDS |
| CATCGAAATCTAAAAGCTTC+TGG | 0.316718 | 3.4:-97610722 | MS.gene064731:CDS |
| TCATATATGGTTACGAAGAT+TGG | 0.317405 | 3.4:-97607243 | MS.gene064731:CDS |
| CATATGCTTGCGAGCTTCTT+GGG | 0.332927 | 3.4:+97607204 | None:intergenic |
| GTATATTTGCGGACCATGTT+AGG | 0.355647 | 3.4:+97608515 | None:intergenic |
| TAAAATTAGATTCCCATAGA+TGG | 0.360134 | 3.4:+97609745 | None:intergenic |
| AAGGTTTCTTACCCCAAATT+CGG | 0.374235 | 3.4:-97607000 | MS.gene064731:CDS |
| TGATTCTCCTACGCTTGTTA+TGG | 0.377711 | 3.4:-97610420 | MS.gene064731:CDS |
| GAGAAAACGTGGTTCATTAC+TGG | 0.383415 | 3.4:+97610469 | None:intergenic |
| GTGCCCACCACATTCATATA+TGG | 0.386094 | 3.4:-97607256 | MS.gene064731:CDS |
| ATAACAAGCGTAGGAGAATC+AGG | 0.396588 | 3.4:+97610422 | None:intergenic |
| GTTCAAGAGCGTGTTAATAT+AGG | 0.397338 | 3.4:-97610533 | MS.gene064731:CDS |
| TAAGCAGACGATAGCCCTTC+GGG | 0.404316 | 3.4:+97606963 | None:intergenic |
| ATTAAGTGTTGTACATGCTC+AGG | 0.405149 | 3.4:+97609861 | None:intergenic |
| ACACAGCTCCCCACTAGCTT+TGG | 0.405889 | 3.4:+97608315 | None:intergenic |
| ATGTCCAAGCAGTATGAAAT+TGG | 0.409418 | 3.4:+97610030 | None:intergenic |
| AGGTTTGGTACACATTCAAC+CGG | 0.416717 | 3.4:-97608485 | MS.gene064731:CDS |
| ACCTAGCGCTTGTATATTTG+CGG | 0.429818 | 3.4:+97608504 | None:intergenic |
| GAGCGTGTTAATATAGGTTC+TGG | 0.437567 | 3.4:-97610527 | MS.gene064731:CDS |
| CTAGGATGCCCCTTCTTCAA+AGG | 0.443647 | 3.4:-97608261 | MS.gene064731:intron |
| GAGGAATCAAGTCTGCTAAC+TGG | 0.445927 | 3.4:-97608446 | MS.gene064731:intron |
| GTACTTCTACATGTGAAATC+AGG | 0.449921 | 3.4:+97610200 | None:intergenic |
| CTCCTGGCTCTAAAGTTAGA+TGG | 0.450780 | 3.4:-97610502 | MS.gene064731:CDS |
| GCTTCTGGTCTTCACTCCGT+TGG | 0.462666 | 3.4:-97610707 | MS.gene064731:CDS |
| CTGACCAATTTCATACTGCT+TGG | 0.468352 | 3.4:-97610034 | MS.gene064731:CDS |
| CTAAGCAGACGATAGCCCTT+CGG | 0.468701 | 3.4:+97606962 | None:intergenic |
| AATATAGGTTCTGGTCCTCC+TGG | 0.478496 | 3.4:-97610518 | MS.gene064731:CDS |
| GTCAATGAACACAAAATGTC+CGG | 0.479554 | 3.4:+97607064 | None:intergenic |
| TGAAATTATCAGGGTCCCTC+AGG | 0.480922 | 3.4:-97607170 | MS.gene064731:intron |
| AAATATACAAGCGCTAGGTT+TGG | 0.481313 | 3.4:-97608500 | MS.gene064731:CDS |
| GATTGCCAAACCTTTGAAGA+AGG | 0.482203 | 3.4:+97608251 | None:intergenic |
| AGGTCCTTGGGGTCCTAACA+TGG | 0.493507 | 3.4:-97608528 | MS.gene064731:CDS |
| CGAAGGGCTATCGTCTGCTT+AGG | 0.496103 | 3.4:-97606961 | None:intergenic |
| CTTACTTGATAATGGAAAGA+AGG | 0.504243 | 3.4:+97610643 | None:intergenic |
| TTGCATTTGGAGCATTTGCT+AGG | 0.504415 | 3.4:-97608279 | MS.gene064731:CDS |
| ATCATTGCTGTTGATCAACT+TGG | 0.506443 | 3.4:-97610329 | MS.gene064731:CDS |
| GTTTCTTCTGTAAACCCGGC+AGG | 0.515353 | 3.4:+97609828 | None:intergenic |
| CATGGATACGCTGCTTCTCA+GGG | 0.521168 | 3.4:-97610395 | MS.gene064731:CDS |
| GTGGTGGGCACTTTCCACTC+TGG | 0.523249 | 3.4:+97607268 | None:intergenic |
| AGATTATGTTTATCATACAT+TGG | 0.527652 | 3.4:-97608341 | MS.gene064731:CDS |
| CAGCTGAATGGAAGCCACTT+GGG | 0.528872 | 3.4:+97607039 | None:intergenic |
| AAGCATAAAACACAGCTGAA+TGG | 0.533305 | 3.4:+97607027 | None:intergenic |
| ACAGCTGAATGGAAGCCACT+TGG | 0.534128 | 3.4:+97607038 | None:intergenic |
| ATCTGTTTCTTCTGTAAACC+CGG | 0.536750 | 3.4:+97609824 | None:intergenic |
| ATTGCCAAACCTTTGAAGAA+GGG | 0.549575 | 3.4:+97608252 | None:intergenic |
| CATTGGCGGCCAAAGCTAGT+GGG | 0.553970 | 3.4:-97608324 | MS.gene064731:CDS |
| AACCATCTAACTTTAGAGCC+AGG | 0.557305 | 3.4:+97610500 | None:intergenic |
| AGAAGCTCGCAAGCATATGA+AGG | 0.558147 | 3.4:-97607200 | MS.gene064731:CDS |
| GTGGTTCATTACTGGTTGAA+CGG | 0.564216 | 3.4:+97610477 | None:intergenic |
| GGCAGAGGTTTAGGTCCTTG+GGG | 0.564857 | 3.4:-97608539 | MS.gene064731:intron |
| ACATTGGCGGCCAAAGCTAG+TGG | 0.568091 | 3.4:-97608325 | MS.gene064731:CDS |
| ATGATATGATCGGTTGAAGT+GGG | 0.570401 | 3.4:+97610681 | None:intergenic |
| TTGCCAAACCTTTGAAGAAG+GGG | 0.577063 | 3.4:+97608253 | None:intergenic |
| GAAAATGAATCTCTTCCCGA+AGG | 0.579910 | 3.4:-97606978 | MS.gene064731:CDS |
| AAGTTTCGAGCAACATGGAA+GGG | 0.587783 | 3.4:-97609780 | MS.gene064731:CDS |
| TTCACATGTAGAAGTACTGA+AGG | 0.587873 | 3.4:-97610194 | MS.gene064731:intron |
| AGCCGTTCTGAACCATCTAT+GGG | 0.595543 | 3.4:-97609757 | MS.gene064731:CDS |
| TAAGTTTCGAGCAACATGGA+AGG | 0.597296 | 3.4:-97609781 | MS.gene064731:CDS |
| TGCTTCCAAATACGCGCTCA+AGG | 0.600744 | 3.4:-97609990 | MS.gene064731:intron |
| TTATGTTTATCATACATTGG+CGG | 0.606664 | 3.4:-97608338 | MS.gene064731:CDS |
| TTAAGTGTTGTACATGCTCA+GGG | 0.606900 | 3.4:+97609862 | None:intergenic |
| GATGATATGATCGGTTGAAG+TGG | 0.613666 | 3.4:+97610680 | None:intergenic |
| ATCTTGCAGAAACTGAGGCA+TGG | 0.614755 | 3.4:-97610096 | MS.gene064731:intron |
| TTCGTAACCATATATGAATG+TGG | 0.615369 | 3.4:+97607249 | None:intergenic |
| CTCAGCGGCGATGATATGAT+CGG | 0.621828 | 3.4:+97610671 | None:intergenic |
| CCATGAACCATAACAAGCGT+AGG | 0.627502 | 3.4:+97610413 | None:intergenic |
| TAACCATATATGAATGTGGT+GGG | 0.627519 | 3.4:+97607253 | None:intergenic |
| TCATTGCTGTTGATCAACTT+GGG | 0.634448 | 3.4:-97610328 | MS.gene064731:intron |
| GTGTTCATTGACAACCCAAG+TGG | 0.634463 | 3.4:-97607053 | MS.gene064731:CDS |
| TTTCTTGCAGTGCTCCAGAG+TGG | 0.634871 | 3.4:-97607282 | MS.gene064731:intron |
| ATTGGCGGCCAAAGCTAGTG+GGG | 0.638338 | 3.4:-97608323 | MS.gene064731:CDS |
| GGTTCCATGTGAAATTATCA+GGG | 0.643857 | 3.4:-97607179 | MS.gene064731:CDS |
| CGGACCATGTTAGGACCCCA+AGG | 0.646328 | 3.4:+97608524 | None:intergenic |
| AAAATGAATCTCTTCCCGAA+GGG | 0.646555 | 3.4:-97606977 | MS.gene064731:CDS |
| AGCAATGATTCTGAAACGAG+AGG | 0.649538 | 3.4:+97610343 | None:intergenic |
| TTACTAAGTTTCGAGCAACA+TGG | 0.649865 | 3.4:-97609785 | MS.gene064731:CDS |
| GGAAAGAAGGCGTTTCTCAG+CGG | 0.650667 | 3.4:+97610656 | None:intergenic |
| TCCGCAAATATACAAGCGCT+AGG | 0.656139 | 3.4:-97608505 | MS.gene064731:CDS |
| GTAACCATATATGAATGTGG+TGG | 0.658814 | 3.4:+97607252 | None:intergenic |
| TGTTGATCTTGCAGAAACTG+AGG | 0.661163 | 3.4:-97610101 | MS.gene064731:intron |
| ATTAGACAAAACGACGACGT+CGG | 0.664772 | 3.4:-97610753 | MS.gene064731:CDS |
| TTCCCATAGATGGTTCAGAA+CGG | 0.677131 | 3.4:+97609755 | None:intergenic |
| CGGTTGAAGTGGGAATCCAA+CGG | 0.678476 | 3.4:+97610691 | None:intergenic |
| GAAGATTGGATGAATTACGA+AGG | 0.684343 | 3.4:-97607229 | MS.gene064731:CDS |
| GTAACAGTGTTGAGAAAACG+TGG | 0.691173 | 3.4:+97610458 | None:intergenic |
| GGTTTGGTACACATTCAACC+GGG | 0.692249 | 3.4:-97608484 | MS.gene064731:CDS |
| GGGACCCTGATAATTTCACA+TGG | 0.704694 | 3.4:+97607175 | None:intergenic |
| CATCTAACTTTAGAGCCAGG+AGG | 0.752922 | 3.4:+97610503 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAATATATTTTTGCATT+TGG | - | chr3.4:97609435-97609454 | MS.gene064731:intron | 10.0% |
| !!! | TTTTTGATGATAAAAATATA+GGG | + | chr3.4:97610144-97610163 | None:intergenic | 10.0% |
| !!! | TTTTTTGATGATAAAAATAT+AGG | + | chr3.4:97610145-97610164 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTCTCTTATTA+TGG | - | chr3.4:97608748-97608767 | MS.gene064731:intron | 10.0% |
| !! | AAAATTAAAACATGAACTTA+AGG | - | chr3.4:97610280-97610299 | MS.gene064731:intron | 15.0% |
| !! | AAATTAAAACATGAACTTAA+GGG | - | chr3.4:97610281-97610300 | MS.gene064731:intron | 15.0% |
| !! | ACAAAATAATATAACAATGT+TGG | + | chr3.4:97609135-97609154 | None:intergenic | 15.0% |
| !! | ACAAATACATATTAAATGAA+GGG | + | chr3.4:97608409-97608428 | None:intergenic | 15.0% |
| !! | AGATAAATATCTTGATTATT+AGG | - | chr3.4:97610364-97610383 | MS.gene064731:CDS | 15.0% |
| !! | CAAGATATTAAATTGATATA+TGG | - | chr3.4:97609309-97609328 | MS.gene064731:intron | 15.0% |
| !! | TAATAACAATAAAAAGTGAT+TGG | + | chr3.4:97608805-97608824 | None:intergenic | 15.0% |
| !! | TACAAATACATATTAAATGA+AGG | + | chr3.4:97608410-97608429 | None:intergenic | 15.0% |
| !! | TTATTACTCAAATCAAATAT+GGG | - | chr3.4:97608819-97608838 | MS.gene064731:intron | 15.0% |
| !!! | AAAAAATGTTTCATTGTTTT+AGG | + | chr3.4:97610602-97610621 | None:intergenic | 15.0% |
| !!! | ACAATTTTCTGTTATTATAT+TGG | - | chr3.4:97608153-97608172 | MS.gene064731:intron | 15.0% |
| !!! | TAAATAAACTTCAATTTGTT+TGG | - | chr3.4:97607158-97607177 | MS.gene064731:intron | 15.0% |
| !!! | TCTTTTTTGTTTTCATTTTT+GGG | - | chr3.4:97609658-97609677 | MS.gene064731:intron | 15.0% |
| !!! | TTCTTTTTTGTTTTCATTTT+TGG | - | chr3.4:97609657-97609676 | MS.gene064731:intron | 15.0% |
| !! | AAATGAATAAAATATGCATC+AGG | + | chr3.4:97607835-97607854 | None:intergenic | 20.0% |
| !! | AATTAAAACATGAACTTAAG+GGG | - | chr3.4:97610282-97610301 | MS.gene064731:intron | 20.0% |
| !! | ACGAAATTTAAATAGGTAAA+CGG | + | chr3.4:97607606-97607625 | None:intergenic | 20.0% |
| !! | AGATTATGTTTATCATACAT+TGG | - | chr3.4:97609386-97609405 | MS.gene064731:intron | 20.0% |
| !! | AGTTCTACTTAATAACTATT+TGG | - | chr3.4:97608482-97608501 | MS.gene064731:CDS | 20.0% |
| !! | ATCAACAACGAAATTTAAAT+AGG | + | chr3.4:97607613-97607632 | None:intergenic | 20.0% |
| !! | CCATAGAATAAAGTATAAAA+TGG | - | chr3.4:97609092-97609111 | MS.gene064731:intron | 20.0% |
| !! | GATTAAAAAATTATACCTGA+GGG | + | chr3.4:97610575-97610594 | None:intergenic | 20.0% |
| !! | GTTATTACTCAAATCAAATA+TGG | - | chr3.4:97608818-97608837 | MS.gene064731:intron | 20.0% |
| !! | TATCATAGGATGATAAAAAT+GGG | + | chr3.4:97608046-97608065 | None:intergenic | 20.0% |
| !! | TGATAAACATAATCTTCAAT+AGG | + | chr3.4:97609381-97609400 | None:intergenic | 20.0% |
| !! | TGATTAAAAAATTATACCTG+AGG | + | chr3.4:97610576-97610595 | None:intergenic | 20.0% |
| !! | TTATCATAGGATGATAAAAA+TGG | + | chr3.4:97608047-97608066 | None:intergenic | 20.0% |
| !!! | CCATTTTATACTTTATTCTA+TGG | + | chr3.4:97609095-97609114 | None:intergenic | 20.0% |
| !!! | TCATAAATAAAAGTATACAC+AGG | + | chr3.4:97608119-97608138 | None:intergenic | 20.0% |
| !!! | TTCTATATATTTTCACAGTT+GGG | - | chr3.4:97607490-97607509 | MS.gene064731:intron | 20.0% |
| !!! | TTTCTATATATTTTCACAGT+TGG | - | chr3.4:97607489-97607508 | MS.gene064731:intron | 20.0% |
| ! | AAATCAAATATGGGATTAGA+GGG | - | chr3.4:97608828-97608847 | MS.gene064731:intron | 25.0% |
| ! | AAATTAATTACTTCTATCGC+AGG | - | chr3.4:97610640-97610659 | MS.gene064731:intron | 25.0% |
| ! | ACAAGAACAATTAAGTCAAT+AGG | + | chr3.4:97609748-97609767 | None:intergenic | 25.0% |
| ! | ATGTTTGGGAAAAATAGAAT+AGG | - | chr3.4:97609848-97609867 | MS.gene064731:CDS | 25.0% |
| ! | CAAAAAATTGTCAGGTAAAA+AGG | - | chr3.4:97608010-97608029 | MS.gene064731:intron | 25.0% |
| ! | CATCAAAAAAGAAAAAAGCT+TGG | - | chr3.4:97610155-97610174 | MS.gene064731:intron | 25.0% |
| ! | GTAAAAGAAAGTTAAGAAGT+CGG | + | chr3.4:97607805-97607824 | None:intergenic | 25.0% |
| ! | TAAAATTAGATTCCCATAGA+TGG | + | chr3.4:97607985-97608004 | None:intergenic | 25.0% |
| ! | TAGTACTACTTACTTGATAA+TGG | + | chr3.4:97607095-97607114 | None:intergenic | 25.0% |
| ! | TATCAGGTTTCAATAAATGA+GGG | - | chr3.4:97608911-97608930 | MS.gene064731:intron | 25.0% |
| ! | TATTACTAACTCTTAAGTCA+TGG | - | chr3.4:97608571-97608590 | MS.gene064731:intron | 25.0% |
| ! | TGATAAAAATATAGGGTGAA+AGG | + | chr3.4:97610137-97610156 | None:intergenic | 25.0% |
| ! | TTATGTTTATCATACATTGG+CGG | - | chr3.4:97609389-97609408 | MS.gene064731:intron | 25.0% |
| ! | TTATTAGGATTAATATCCCA+TGG | - | chr3.4:97610379-97610398 | MS.gene064731:CDS | 25.0% |
| !! | CTTAACTTTCTTTTACCAAA+CGG | - | chr3.4:97607809-97607828 | MS.gene064731:intron | 25.0% |
| !! | TAAACTTCAATTTGTTTGGT+AGG | - | chr3.4:97607162-97607181 | MS.gene064731:intron | 25.0% |
| !! | TATGAAATTGGTCAGATTTT+TGG | + | chr3.4:97607688-97607707 | None:intergenic | 25.0% |
| !! | TCTATATATTTTCACAGTTG+GGG | - | chr3.4:97607491-97607510 | MS.gene064731:intron | 25.0% |
| !! | TGATTGTGTTGGTAAAAAAT+TGG | + | chr3.4:97610035-97610054 | None:intergenic | 25.0% |
| !! | TTTTACCTGACAATTTTTTG+AGG | + | chr3.4:97608010-97608029 | None:intergenic | 25.0% |
| !!! | AATTTTCATTTCTGTTTCTG+TGG | - | chr3.4:97609005-97609024 | MS.gene064731:intron | 25.0% |
| !!! | TGACTTAATTGTTCTTGTTT+TGG | - | chr3.4:97609750-97609769 | MS.gene064731:CDS | 25.0% |
| !!! | TTCTGTTATTATATTGGTTC+TGG | - | chr3.4:97608159-97608178 | MS.gene064731:intron | 25.0% |
| AACAATTAAGTCAATAGGAG+TGG | + | chr3.4:97609743-97609762 | None:intergenic | 30.0% | |
| AACAGTTATCTTGATTGTGT+TGG | + | chr3.4:97610046-97610065 | None:intergenic | 30.0% | |
| AATCAAATATGGGATTAGAG+GGG | - | chr3.4:97608829-97608848 | MS.gene064731:intron | 30.0% | |
| AATGTGTGCTAACTTATCAT+AGG | + | chr3.4:97608060-97608079 | None:intergenic | 30.0% | |
| ACAATTAAGTCAATAGGAGT+GGG | + | chr3.4:97609742-97609761 | None:intergenic | 30.0% | |
| ACTTAAAACAGCTAATCAGA+TGG | + | chr3.4:97609511-97609530 | None:intergenic | 30.0% | |
| ACTTAAGGGGAAAAAAATTC+AGG | - | chr3.4:97610295-97610314 | MS.gene064731:intron | 30.0% | |
| AGAGTCTTCTACTATATATC+AGG | - | chr3.4:97608216-97608235 | MS.gene064731:intron | 30.0% | |
| ATCTCTATGTATGACATGAT+TGG | + | chr3.4:97609583-97609602 | None:intergenic | 30.0% | |
| CAAATCAAATATGGGATTAG+AGG | - | chr3.4:97608827-97608846 | MS.gene064731:intron | 30.0% | |
| CTTAAAACAGCTAATCAGAT+GGG | + | chr3.4:97609510-97609529 | None:intergenic | 30.0% | |
| GAGTCTTCTACTATATATCA+GGG | - | chr3.4:97608217-97608236 | MS.gene064731:intron | 30.0% | |
| GTAATCTTAAGTCAATATGC+CGG | + | chr3.4:97608455-97608474 | None:intergenic | 30.0% | |
| GTATCAGGTTTCAATAAATG+AGG | - | chr3.4:97608910-97608929 | MS.gene064731:intron | 30.0% | |
| TAACCATATATGAATGTGGT+GGG | + | chr3.4:97610477-97610496 | None:intergenic | 30.0% | |
| TCAACCATTAATTAAGCCAA+GGG | + | chr3.4:97608626-97608645 | None:intergenic | 30.0% | |
| TCATATATGGTTACGAAGAT+TGG | - | chr3.4:97610484-97610503 | MS.gene064731:CDS | 30.0% | |
| TTAATTAATGGTTGAGGACT+TGG | - | chr3.4:97608631-97608650 | MS.gene064731:intron | 30.0% | |
| TTACACCTCAAAAAATTGTC+AGG | - | chr3.4:97608002-97608021 | MS.gene064731:intron | 30.0% | |
| TTAGTAACAAACTCAGTCTT+TGG | + | chr3.4:97607929-97607948 | None:intergenic | 30.0% | |
| TTATTATGGTTACAAGCAGA+AGG | - | chr3.4:97608762-97608781 | MS.gene064731:intron | 30.0% | |
| TTCGTAACCATATATGAATG+TGG | + | chr3.4:97610481-97610500 | None:intergenic | 30.0% | |
| TTGTTATAACTGAAGTTGAC+CGG | - | chr3.4:97608433-97608452 | MS.gene064731:intron | 30.0% | |
| ! | AGAGATTCATTTTCCGAATT+TGG | + | chr3.4:97610743-97610762 | None:intergenic | 30.0% |
| ! | AGATTCATTTTCCGAATTTG+GGG | + | chr3.4:97610741-97610760 | None:intergenic | 30.0% |
| ! | AGTCATGGATGTAATCATTT+TGG | - | chr3.4:97608586-97608605 | MS.gene064731:intron | 30.0% |
| ! | GAGATTCATTTTCCGAATTT+GGG | + | chr3.4:97610742-97610761 | None:intergenic | 30.0% |
| ! | GCATGTACAACACTTAATTT+TGG | - | chr3.4:97607871-97607890 | MS.gene064731:intron | 30.0% |
| ! | TAATTTTCTTCCTGAATGCT+TGG | + | chr3.4:97610267-97610286 | None:intergenic | 30.0% |
| ! | TGTACAACACTTAATTTTGG+TGG | - | chr3.4:97607874-97607893 | MS.gene064731:intron | 30.0% |
| ! | TTATGCTACTTCTAAGTATC+AGG | - | chr3.4:97608895-97608914 | MS.gene064731:intron | 30.0% |
| !! | AGCTTTATTGTATATGAGCA+CGG | - | chr3.4:97608723-97608742 | MS.gene064731:intron | 30.0% |
| !! | ATTTTAATGCAATGCAGCAA+TGG | + | chr3.4:97607771-97607790 | None:intergenic | 30.0% |
| !! | CTTACTTGATAATGGAAAGA+AGG | + | chr3.4:97607087-97607106 | None:intergenic | 30.0% |
| !! | GTACAACACTTAATTTTGGT+GGG | - | chr3.4:97607875-97607894 | MS.gene064731:intron | 30.0% |
| !! | TTGTCTTTGAAATGAAGTGT+TGG | - | chr3.4:97608329-97608348 | MS.gene064731:CDS | 30.0% |
| !! | TTTTAGCCAATGTCTTGTTA+AGG | - | chr3.4:97610403-97610422 | MS.gene064731:CDS | 30.0% |
| !!! | AATCACCCTTACATGTTTTT+TGG | - | chr3.4:97609045-97609064 | MS.gene064731:intron | 30.0% |
| !!! | ATGGTTCATTGATTCTTTTG+AGG | - | chr3.4:97607650-97607669 | MS.gene064731:intron | 30.0% |
| !!! | GTGGTGCTACAATTTTTATA+AGG | + | chr3.4:97609716-97609735 | None:intergenic | 30.0% |
| !!! | TCATTGATTCTTTTGAGGAA+TGG | - | chr3.4:97607655-97607674 | MS.gene064731:intron | 30.0% |
| AAAAAGAAAAAAGCTTGGCC+AGG | - | chr3.4:97610160-97610179 | MS.gene064731:intron | 35.0% | |
| AAAAGAAAAAAGCTTGGCCA+GGG | - | chr3.4:97610161-97610180 | MS.gene064731:intron | 35.0% | |
| AAAATGAATCTCTTCCCGAA+GGG | - | chr3.4:97610750-97610769 | MS.gene064731:CDS | 35.0% | |
| AAATATACAAGCGCTAGGTT+TGG | - | chr3.4:97609227-97609246 | MS.gene064731:intron | 35.0% | |
| AAATATCATTCCACGAAGCA+TGG | - | chr3.4:97608955-97608974 | MS.gene064731:intron | 35.0% | |
| AAATGTCTAACCAAGCATTC+AGG | - | chr3.4:97610254-97610273 | MS.gene064731:intron | 35.0% | |
| AAGCATAAAACACAGCTGAA+TGG | + | chr3.4:97610703-97610722 | None:intergenic | 35.0% | |
| AAGGTTTCTTACCCCAAATT+CGG | - | chr3.4:97610727-97610746 | MS.gene064731:CDS | 35.0% | |
| AGAGTCATTCTTCTACTTGT+AGG | - | chr3.4:97608854-97608873 | MS.gene064731:intron | 35.0% | |
| AGGTTCCATGTGAAATTATC+AGG | - | chr3.4:97610547-97610566 | MS.gene064731:intron | 35.0% | |
| ATACAATAAAGCTCTTGCCA+CGG | + | chr3.4:97608716-97608735 | None:intergenic | 35.0% | |
| ATGACCCTTGGCTTAATTAA+TGG | - | chr3.4:97608619-97608638 | MS.gene064731:intron | 35.0% | |
| ATGATATGATCGGTTGAAGT+GGG | + | chr3.4:97607049-97607068 | None:intergenic | 35.0% | |
| ATGTCCAAGCAGTATGAAAT+TGG | + | chr3.4:97607700-97607719 | None:intergenic | 35.0% | |
| CATCGAAATCTAAAAGCTTC+TGG | - | chr3.4:97607005-97607024 | MS.gene064731:CDS | 35.0% | |
| CTCAACCATTAATTAAGCCA+AGG | + | chr3.4:97608627-97608646 | None:intergenic | 35.0% | |
| CTTGGCTTAATTAATGGTTG+AGG | - | chr3.4:97608625-97608644 | MS.gene064731:intron | 35.0% | |
| GAAGATTGGATGAATTACGA+AGG | - | chr3.4:97610498-97610517 | MS.gene064731:CDS | 35.0% | |
| GAGAACCTAAGTCAATATGT+CGG | + | chr3.4:97608532-97608551 | None:intergenic | 35.0% | |
| GGTTCCATGTGAAATTATCA+GGG | - | chr3.4:97610548-97610567 | MS.gene064731:intron | 35.0% | |
| GTAACCATATATGAATGTGG+TGG | + | chr3.4:97610478-97610497 | None:intergenic | 35.0% | |
| GTACTTCTACATGTGAAATC+AGG | + | chr3.4:97607530-97607549 | None:intergenic | 35.0% | |
| GTCAATGAACACAAAATGTC+CGG | + | chr3.4:97610666-97610685 | None:intergenic | 35.0% | |
| GTGACTATTCTCATGTTTGT+TGG | + | chr3.4:97609071-97609090 | None:intergenic | 35.0% | |
| GTTGGCCAAAAAACATGTAA+GGG | + | chr3.4:97609053-97609072 | None:intergenic | 35.0% | |
| TACTTTGTTGCTCGACTTTA+AGG | - | chr3.4:97607577-97607596 | MS.gene064731:intron | 35.0% | |
| TCTACAGTATCAACAAACTG+AGG | + | chr3.4:97608199-97608218 | None:intergenic | 35.0% | |
| TGAGGGAAAGCTAGAAAAAA+TGG | - | chr3.4:97608928-97608947 | MS.gene064731:intron | 35.0% | |
| TGTTGGCCAAAAAACATGTA+AGG | + | chr3.4:97609054-97609073 | None:intergenic | 35.0% | |
| TTACTAAGTTTCGAGCAACA+TGG | - | chr3.4:97607942-97607961 | MS.gene064731:intron | 35.0% | |
| ! | AAGAACAACATATACCGACT+AGG | - | chr3.4:97609818-97609837 | MS.gene064731:CDS | 35.0% |
| ! | AAGACATTGGCTAAAAACCA+TGG | + | chr3.4:97610399-97610418 | None:intergenic | 35.0% |
| ! | AGACATTGGCTAAAAACCAT+GGG | + | chr3.4:97610398-97610417 | None:intergenic | 35.0% |
| ! | ATACTGCTTGGACATTCTTT+TGG | - | chr3.4:97607705-97607724 | MS.gene064731:intron | 35.0% |
| ! | ATATATTTTCACAGTTGGGG+CGG | - | chr3.4:97607494-97607513 | MS.gene064731:intron | 35.0% |
| ! | ATCATTGCTGTTGATCAACT+TGG | - | chr3.4:97607398-97607417 | MS.gene064731:intron | 35.0% |
| ! | ATCTGTTTCTTCTGTAAACC+CGG | + | chr3.4:97607906-97607925 | None:intergenic | 35.0% |
| ! | ATTAAGTGTTGTACATGCTC+AGG | + | chr3.4:97607869-97607888 | None:intergenic | 35.0% |
| ! | ATTGCCAAACCTTTGAAGAA+GGG | + | chr3.4:97609478-97609497 | None:intergenic | 35.0% |
| ! | CAGTTTTTCTGATGCATTTG+TGG | - | chr3.4:97609167-97609186 | MS.gene064731:intron | 35.0% |
| ! | GGATGAATTTTTATGACCCT+TGG | - | chr3.4:97608607-97608626 | MS.gene064731:intron | 35.0% |
| ! | GTTCAAGAGCGTGTTAATAT+AGG | - | chr3.4:97607194-97607213 | MS.gene064731:CDS | 35.0% |
| ! | TCAATTTGTTTGGTAGGACT+GGG | - | chr3.4:97607168-97607187 | MS.gene064731:intron | 35.0% |
| ! | TCATTGCTGTTGATCAACTT+GGG | - | chr3.4:97607399-97607418 | MS.gene064731:intron | 35.0% |
| ! | TTAAGTGTTGTACATGCTCA+GGG | + | chr3.4:97607868-97607887 | None:intergenic | 35.0% |
| ! | TTCAATTTGTTTGGTAGGAC+TGG | - | chr3.4:97607167-97607186 | MS.gene064731:intron | 35.0% |
| !! | TTCACATGTAGAAGTACTGA+AGG | - | chr3.4:97607533-97607552 | MS.gene064731:intron | 35.0% |
| AAAATATGCATCAGGCCGTT+TGG | + | chr3.4:97607827-97607846 | None:intergenic | 40.0% | |
| AAAATTCCTTCCCGATACCA+GGG | + | chr3.4:97608991-97609010 | None:intergenic | 40.0% | |
| AAGTTTCGAGCAACATGGAA+GGG | - | chr3.4:97607947-97607966 | MS.gene064731:intron | 40.0% | |
| AATAGGTTAGTAGCTGCTGA+TGG | - | chr3.4:97609865-97609884 | MS.gene064731:CDS | 40.0% | |
| ACCTAGCGCTTGTATATTTG+CGG | + | chr3.4:97609226-97609245 | None:intergenic | 40.0% | |
| AGGTTCTCTTTGTCACTGTT+GGG | - | chr3.4:97608544-97608563 | MS.gene064731:intron | 40.0% | |
| AGTATCAACAAACTGAGGTG+AGG | + | chr3.4:97608194-97608213 | None:intergenic | 40.0% | |
| ATAACAAGCGTAGGAGAATC+AGG | + | chr3.4:97607308-97607327 | None:intergenic | 40.0% | |
| ATAATGCTCCACTGCAATGT+AGG | + | chr3.4:97610114-97610133 | None:intergenic | 40.0% | |
| ATCAAGTCTGCTAACTGGTA+TGG | - | chr3.4:97609286-97609305 | MS.gene064731:intron | 40.0% | |
| ATGTGCATCCTGATTTCTGA+GGG | - | chr3.4:97609947-97609966 | MS.gene064731:intron | 40.0% | |
| ATTAGACAAAACGACGACGT+CGG | - | chr3.4:97606974-97606993 | MS.gene064731:CDS | 40.0% | |
| CAAACATGTAGTTGCCTAGT+CGG | + | chr3.4:97609835-97609854 | None:intergenic | 40.0% | |
| CATATCTATCCTGTATCACC+AGG | - | chr3.4:97609919-97609938 | MS.gene064731:intron | 40.0% | |
| CATTTCCATTCTTACCCAAG+AGG | + | chr3.4:97610239-97610258 | None:intergenic | 40.0% | |
| CTGACCAATTTCATACTGCT+TGG | - | chr3.4:97607693-97607712 | MS.gene064731:intron | 40.0% | |
| GAAAATGAATCTCTTCCCGA+AGG | - | chr3.4:97610749-97610768 | MS.gene064731:CDS | 40.0% | |
| GAATCGCATCTCAAAAAAGC+AGG | + | chr3.4:97609640-97609659 | None:intergenic | 40.0% | |
| GACTAGGCAACTACATGTTT+GGG | - | chr3.4:97609834-97609853 | MS.gene064731:CDS | 40.0% | |
| GAGAAAACGTGGTTCATTAC+TGG | + | chr3.4:97607261-97607280 | None:intergenic | 40.0% | |
| GAGCCCTTACAAATGATACA+AGG | + | chr3.4:97610072-97610091 | None:intergenic | 40.0% | |
| GAGCGTGTTAATATAGGTTC+TGG | - | chr3.4:97607200-97607219 | MS.gene064731:CDS | 40.0% | |
| GAGTAAAGGGAGCAGTAAAT+AGG | - | chr3.4:97609995-97610014 | MS.gene064731:CDS | 40.0% | |
| GATGAATATCTGTGCCTCTT+GGG | - | chr3.4:97610222-97610241 | MS.gene064731:CDS | 40.0% | |
| GATGATATGATCGGTTGAAG+TGG | + | chr3.4:97607050-97607069 | None:intergenic | 40.0% | |
| GCGCCTTGTATCATTTGTAA+GGG | - | chr3.4:97610066-97610085 | MS.gene064731:CDS | 40.0% | |
| GTATATTTGCGGACCATGTT+AGG | + | chr3.4:97609215-97609234 | None:intergenic | 40.0% | |
| TAAAAAGTGATTGGCAACCC+AGG | + | chr3.4:97608796-97608815 | None:intergenic | 40.0% | |
| TAAGTTTCGAGCAACATGGA+AGG | - | chr3.4:97607946-97607965 | MS.gene064731:intron | 40.0% | |
| TAATGCTCCACTGCAATGTA+GGG | + | chr3.4:97610113-97610132 | None:intergenic | 40.0% | |
| TAATTACTTCTATCGCAGGC+CGG | - | chr3.4:97610644-97610663 | MS.gene064731:intron | 40.0% | |
| TAGGTTCTCTTTGTCACTGT+TGG | - | chr3.4:97608543-97608562 | MS.gene064731:intron | 40.0% | |
| TATGCCACACCACAAATTCA+AGG | + | chr3.4:97610193-97610212 | None:intergenic | 40.0% | |
| TGATGAATATCTGTGCCTCT+TGG | - | chr3.4:97610221-97610240 | MS.gene064731:CDS | 40.0% | |
| TGCAAGAAAGTGATGTAGAG+AGG | + | chr3.4:97610434-97610453 | None:intergenic | 40.0% | |
| TGCGCCTTGTATCATTTGTA+AGG | - | chr3.4:97610065-97610084 | MS.gene064731:CDS | 40.0% | |
| TGTTGATCTTGCAGAAACTG+AGG | - | chr3.4:97607626-97607645 | MS.gene064731:intron | 40.0% | |
| TTCCCATAGATGGTTCAGAA+CGG | + | chr3.4:97607975-97607994 | None:intergenic | 40.0% | |
| TTGACCTTGAATTTGTGGTG+TGG | - | chr3.4:97610186-97610205 | MS.gene064731:intron | 40.0% | |
| ! | AGGTTTGGTACACATTCAAC+CGG | - | chr3.4:97609242-97609261 | MS.gene064731:intron | 40.0% |
| ! | CTCTTCAATCAGTTTTTGCC+CGG | + | chr3.4:97609264-97609283 | None:intergenic | 40.0% |
| ! | CTGTGTTTTATGCTTGTCGA+AGG | - | chr3.4:97610708-97610727 | MS.gene064731:CDS | 40.0% |
| ! | GATTGCCAAACCTTTGAAGA+AGG | + | chr3.4:97609479-97609498 | None:intergenic | 40.0% |
| ! | GTAACAGTGTTGAGAAAACG+TGG | + | chr3.4:97607272-97607291 | None:intergenic | 40.0% |
| ! | GTGGTTCATTACTGGTTGAA+CGG | + | chr3.4:97607253-97607272 | None:intergenic | 40.0% |
| ! | TGATTCTCCTACGCTTGTTA+TGG | - | chr3.4:97607307-97607326 | MS.gene064731:intron | 40.0% |
| ! | TGTTTCTGTGGAATTAGCCA+TGG | - | chr3.4:97609017-97609036 | MS.gene064731:intron | 40.0% |
| ! | TTGCATTTGGAGCATTTGCT+AGG | - | chr3.4:97609448-97609467 | MS.gene064731:intron | 40.0% |
| ! | TTGCCAAACCTTTGAAGAAG+GGG | + | chr3.4:97609477-97609496 | None:intergenic | 40.0% |
| !! | AACCATCTAACTTTAGAGCC+AGG | + | chr3.4:97607230-97607249 | None:intergenic | 40.0% |
| !! | AGCAATGATTCTGAAACGAG+AGG | + | chr3.4:97607387-97607406 | None:intergenic | 40.0% |
| !! | GTAGACCGACATATTGACTT+AGG | - | chr3.4:97608524-97608543 | MS.gene064731:CDS | 40.0% |
| AATCACCAATCCCTGGTATC+GGG | - | chr3.4:97608978-97608997 | MS.gene064731:intron | 45.0% | |
| AATGCATTTCGCACGAGTTC+AGG | - | chr3.4:97608367-97608386 | MS.gene064731:intron | 45.0% | |
| AGAAGCTCGCAAGCATATGA+AGG | - | chr3.4:97610527-97610546 | MS.gene064731:CDS | 45.0% | |
| ATCTTGCAGAAACTGAGGCA+TGG | - | chr3.4:97607631-97607650 | MS.gene064731:intron | 45.0% | |
| ATGCCCCTTCTTCAAAGGTT+TGG | - | chr3.4:97609471-97609490 | MS.gene064731:intron | 45.0% | |
| CAAATTCAAGGTCAACTCCC+TGG | + | chr3.4:97610181-97610200 | None:intergenic | 45.0% | |
| CATATGCTTGCGAGCTTCTT+GGG | + | chr3.4:97610526-97610545 | None:intergenic | 45.0% | |
| CATGTGCATCCTGATTTCTG+AGG | - | chr3.4:97609946-97609965 | MS.gene064731:intron | 45.0% | |
| CCATGAACCATAACAAGCGT+AGG | + | chr3.4:97607317-97607336 | None:intergenic | 45.0% | |
| CGACTAGGCAACTACATGTT+TGG | - | chr3.4:97609833-97609852 | MS.gene064731:CDS | 45.0% | |
| CGAGTTCAGGTCAATAATGC+TGG | - | chr3.4:97608380-97608399 | MS.gene064731:intron | 45.0% | |
| CGGGCAAAAACTGATTGAAG+AGG | - | chr3.4:97609262-97609281 | MS.gene064731:intron | 45.0% | |
| CTGTGGAATTAGCCATGGAA+AGG | - | chr3.4:97609022-97609041 | MS.gene064731:intron | 45.0% | |
| GAAAATTCCTTCCCGATACC+AGG | + | chr3.4:97608992-97609011 | None:intergenic | 45.0% | |
| GAAAGTGATGTAGAGAGGTG+AGG | + | chr3.4:97610429-97610448 | None:intergenic | 45.0% | |
| GAATCACCAATCCCTGGTAT+CGG | - | chr3.4:97608977-97608996 | MS.gene064731:intron | 45.0% | |
| GAGGAATCAAGTCTGCTAAC+TGG | - | chr3.4:97609281-97609300 | MS.gene064731:intron | 45.0% | |
| GCAATGTAGGGAAGACCTTA+GGG | + | chr3.4:97610101-97610120 | None:intergenic | 45.0% | |
| GGGACCCTGATAATTTCACA+TGG | + | chr3.4:97610555-97610574 | None:intergenic | 45.0% | |
| GGGAGTTGACCTTGAATTTG+TGG | - | chr3.4:97610181-97610200 | MS.gene064731:intron | 45.0% | |
| GTAAGGGTGATTCCTTTCCA+TGG | + | chr3.4:97609037-97609056 | None:intergenic | 45.0% | |
| GTGACCTCTTAGTCACATGA+AGG | + | chr3.4:97608662-97608681 | None:intergenic | 45.0% | |
| GTGAGGCCTTAACAAGACAT+TGG | + | chr3.4:97610412-97610431 | None:intergenic | 45.0% | |
| GTGCCCACCACATTCATATA+TGG | - | chr3.4:97610471-97610490 | MS.gene064731:CDS | 45.0% | |
| GTGTTCATTGACAACCCAAG+TGG | - | chr3.4:97610674-97610693 | MS.gene064731:CDS | 45.0% | |
| GTTGCCTTCATGTGACTAAG+AGG | - | chr3.4:97608655-97608674 | MS.gene064731:intron | 45.0% | |
| TAAGGGCTCTTTAAGCCCTA+AGG | - | chr3.4:97610083-97610102 | MS.gene064731:CDS | 45.0% | |
| TCATATGCTTGCGAGCTTCT+TGG | + | chr3.4:97610527-97610546 | None:intergenic | 45.0% | |
| TCCGCAAATATACAAGCGCT+AGG | - | chr3.4:97609222-97609241 | MS.gene064731:intron | 45.0% | |
| TGAAATTATCAGGGTCCCTC+AGG | - | chr3.4:97610557-97610576 | MS.gene064731:intron | 45.0% | |
| TGCAATGTAGGGAAGACCTT+AGG | + | chr3.4:97610102-97610121 | None:intergenic | 45.0% | |
| TGCATTTGTGGCAGAGGTTT+AGG | - | chr3.4:97609179-97609198 | MS.gene064731:intron | 45.0% | |
| TGTGACTAAGAGGTCACAAG+TGG | - | chr3.4:97608665-97608684 | MS.gene064731:intron | 45.0% | |
| TGTGCATCCTGATTTCTGAG+GGG | - | chr3.4:97609948-97609967 | MS.gene064731:intron | 45.0% | |
| TTCTGATGCATTTGTGGCAG+AGG | - | chr3.4:97609173-97609192 | MS.gene064731:intron | 45.0% | |
| ! | AAAGCAGGCTCGATTGACTT+CGG | + | chr3.4:97609625-97609644 | None:intergenic | 45.0% |
| ! | AATATAGGTTCTGGTCCTCC+TGG | - | chr3.4:97607209-97607228 | MS.gene064731:CDS | 45.0% |
| ! | AGCCGTTCTGAACCATCTAT+GGG | - | chr3.4:97607970-97607989 | MS.gene064731:intron | 45.0% |
| ! | ATCCTGATTTCTGAGGGGAA+TGG | - | chr3.4:97609953-97609972 | MS.gene064731:intron | 45.0% |
| ! | ATTGGTGATTCCATGCTTCG+TGG | + | chr3.4:97608968-97608987 | None:intergenic | 45.0% |
| ! | CTGCTTGGACATTCTTTTGG+TGG | - | chr3.4:97607708-97607727 | MS.gene064731:intron | 45.0% |
| ! | GGTTTGGTACACATTCAACC+GGG | - | chr3.4:97609243-97609262 | MS.gene064731:intron | 45.0% |
| ! | TGATTTCTGAGGGGAATGGT+GGG | - | chr3.4:97609957-97609976 | MS.gene064731:intron | 45.0% |
| !! | CATCTAACTTTAGAGCCAGG+AGG | + | chr3.4:97607227-97607246 | None:intergenic | 45.0% |
| !! | CCTACGCTTGTTATGGTTCA+TGG | - | chr3.4:97607314-97607333 | MS.gene064731:intron | 45.0% |
| !! | CTCCTGGCTCTAAAGTTAGA+TGG | - | chr3.4:97607225-97607244 | MS.gene064731:CDS | 45.0% |
| !! | TTAATTTTGGTGGGACCTGC+CGG | - | chr3.4:97607884-97607903 | MS.gene064731:intron | 45.0% |
| !!! | TTATTTTAAATTTTAAGATT+AGG | + | chr3.4:97608308-97608327 | None:intergenic | 5.0% |
| ACAGCTGAATGGAAGCCACT+TGG | + | chr3.4:97610692-97610711 | None:intergenic | 50.0% | |
| ACATGTGCTCCTGGTGATAC+AGG | + | chr3.4:97609931-97609950 | None:intergenic | 50.0% | |
| ACTGACCTTGAGCGCGTATT+TGG | + | chr3.4:97607745-97607764 | None:intergenic | 50.0% | |
| AGCATGGAATCACCAATCCC+TGG | - | chr3.4:97608971-97608990 | MS.gene064731:intron | 50.0% | |
| AGGTCTTCCCTACATTGCAG+TGG | - | chr3.4:97610103-97610122 | MS.gene064731:intron | 50.0% | |
| AGTCAATAGGAGTGGGCAAG+TGG | + | chr3.4:97609735-97609754 | None:intergenic | 50.0% | |
| CACAAGTGGTAAGACTGCCT+GGG | - | chr3.4:97608679-97608698 | MS.gene064731:intron | 50.0% | |
| CACCATTCCCCTCAGAAATC+AGG | + | chr3.4:97609958-97609977 | None:intergenic | 50.0% | |
| CAGCTGAATGGAAGCCACTT+GGG | + | chr3.4:97610691-97610710 | None:intergenic | 50.0% | |
| CATGGATACGCTGCTTCTCA+GGG | - | chr3.4:97607332-97607351 | MS.gene064731:intron | 50.0% | |
| CGGTTGAAGTGGGAATCCAA+CGG | + | chr3.4:97607039-97607058 | None:intergenic | 50.0% | |
| CTAAGCAGACGATAGCCCTT+CGG | + | chr3.4:97610768-97610787 | None:intergenic | 50.0% | |
| CTAGGATGCCCCTTCTTCAA+AGG | - | chr3.4:97609466-97609485 | MS.gene064731:intron | 50.0% | |
| CTCAGCGGCGATGATATGAT+CGG | + | chr3.4:97607059-97607078 | None:intergenic | 50.0% | |
| CTGTGCCTCTTGGGTAAGAA+TGG | - | chr3.4:97610231-97610250 | MS.gene064731:intron | 50.0% | |
| GTTTCTTCTGTAAACCCGGC+AGG | + | chr3.4:97607902-97607921 | None:intergenic | 50.0% | |
| TAAGCAGACGATAGCCCTTC+GGG | + | chr3.4:97610767-97610786 | None:intergenic | 50.0% | |
| TCACAAGTGGTAAGACTGCC+TGG | - | chr3.4:97608678-97608697 | MS.gene064731:intron | 50.0% | |
| TCATGGATACGCTGCTTCTC+AGG | - | chr3.4:97607331-97607350 | MS.gene064731:intron | 50.0% | |
| TGCTTCCAAATACGCGCTCA+AGG | - | chr3.4:97607737-97607756 | MS.gene064731:intron | 50.0% | |
| TGGCAGAGGTTTAGGTCCTT+GGG | - | chr3.4:97609187-97609206 | MS.gene064731:intron | 50.0% | |
| TTTCTTGCAGTGCTCCAGAG+TGG | - | chr3.4:97610445-97610464 | MS.gene064731:CDS | 50.0% | |
| ! | AAGCAGAAGGAGCTTGTTCC+TGG | - | chr3.4:97608775-97608794 | MS.gene064731:intron | 50.0% |
| ! | AGCAGAAGGAGCTTGTTCCT+GGG | - | chr3.4:97608776-97608795 | MS.gene064731:intron | 50.0% |
| ! | CTGATTTCTGAGGGGAATGG+TGG | - | chr3.4:97609956-97609975 | MS.gene064731:intron | 50.0% |
| ! | GAGCCGTTCTGAACCATCTA+TGG | - | chr3.4:97607969-97607988 | MS.gene064731:intron | 50.0% |
| ! | GATTTCTGAGGGGAATGGTG+GGG | - | chr3.4:97609958-97609977 | MS.gene064731:intron | 50.0% |
| !! | GGAAAGAAGGCGTTTCTCAG+CGG | + | chr3.4:97607074-97607093 | None:intergenic | 50.0% |
| !! | TAATTTTGGTGGGACCTGCC+GGG | - | chr3.4:97607885-97607904 | MS.gene064731:intron | 50.0% |
| ACATTGGCGGCCAAAGCTAG+TGG | - | chr3.4:97609402-97609421 | MS.gene064731:intron | 55.0% | |
| AGGTCCTTGGGGTCCTAACA+TGG | - | chr3.4:97609199-97609218 | MS.gene064731:intron | 55.0% | |
| ATTGGCGGCCAAAGCTAGTG+GGG | - | chr3.4:97609404-97609423 | MS.gene064731:intron | 55.0% | |
| CATTGGCGGCCAAAGCTAGT+GGG | - | chr3.4:97609403-97609422 | MS.gene064731:intron | 55.0% | |
| CCACGGAAGAATCCTTTCCC+AGG | + | chr3.4:97608699-97608718 | None:intergenic | 55.0% | |
| CCTGGGAAAGGATTCTTCCG+TGG | - | chr3.4:97608696-97608715 | MS.gene064731:intron | 55.0% | |
| GGCAGAGGTTTAGGTCCTTG+GGG | - | chr3.4:97609188-97609207 | MS.gene064731:intron | 55.0% | |
| GTGGCAGAGGTTTAGGTCCT+TGG | - | chr3.4:97609186-97609205 | MS.gene064731:intron | 55.0% | |
| GTGGTAAGACTGCCTGGGAA+AGG | - | chr3.4:97608684-97608703 | MS.gene064731:intron | 55.0% | |
| TCAGGATGCACATGTGCTCC+TGG | + | chr3.4:97609940-97609959 | None:intergenic | 55.0% | |
| TCCTTCCCGATACCAGGGAT+TGG | + | chr3.4:97608986-97609005 | None:intergenic | 55.0% | |
| ! | ACACAGCTCCCCACTAGCTT+TGG | + | chr3.4:97609415-97609434 | None:intergenic | 55.0% |
| ! | ACCAATCCCTGGTATCGGGA+AGG | - | chr3.4:97608982-97609001 | MS.gene064731:intron | 55.0% |
| ! | GCTTCTGGTCTTCACTCCGT+TGG | - | chr3.4:97607020-97607039 | MS.gene064731:CDS | 55.0% |
| ACTGTGGGGAGGGGGAGTAA+AGG | - | chr3.4:97609981-97610000 | MS.gene064731:intron | 60.0% | |
| CGGACCATGTTAGGACCCCA+AGG | + | chr3.4:97609206-97609225 | None:intergenic | 60.0% | |
| CTGTGGGGAGGGGGAGTAAA+GGG | - | chr3.4:97609982-97610001 | MS.gene064731:intron | 60.0% | |
| ! | AATGGTGGGGACTGTGGGGA+GGG | - | chr3.4:97609971-97609990 | MS.gene064731:intron | 60.0% |
| ! | AGGGGAATGGTGGGGACTGT+GGG | - | chr3.4:97609966-97609985 | MS.gene064731:intron | 60.0% |
| !! | GTGGTGGGCACTTTCCACTC+TGG | + | chr3.4:97610462-97610481 | None:intergenic | 60.0% |
| ! | ATGGTGGGGACTGTGGGGAG+GGG | - | chr3.4:97609972-97609991 | MS.gene064731:intron | 65.0% |
| ! | GAATGGTGGGGACTGTGGGG+AGG | - | chr3.4:97609970-97609989 | MS.gene064731:intron | 65.0% |
| ! | GAGGGGAATGGTGGGGACTG+TGG | - | chr3.4:97609965-97609984 | MS.gene064731:intron | 65.0% |
| ! | GGGGAATGGTGGGGACTGTG+GGG | - | chr3.4:97609967-97609986 | MS.gene064731:intron | 65.0% |
| TGGTGGGGACTGTGGGGAGG+GGG | - | chr3.4:97609973-97609992 | MS.gene064731:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 97606962 | 97610787 | 97606962 | ID=MS.gene064731 |
| chr3.4 | mRNA | 97606962 | 97610787 | 97606962 | ID=MS.gene064731.t1;Parent=MS.gene064731 |
| chr3.4 | exon | 97610648 | 97610787 | 97610648 | ID=MS.gene064731.t1.exon1;Parent=MS.gene064731.t1 |
| chr3.4 | CDS | 97610648 | 97610787 | 97610648 | ID=cds.MS.gene064731.t1;Parent=MS.gene064731.t1 |
| chr3.4 | exon | 97610329 | 97610565 | 97610329 | ID=MS.gene064731.t1.exon2;Parent=MS.gene064731.t1 |
| chr3.4 | CDS | 97610329 | 97610565 | 97610329 | ID=cds.MS.gene064731.t1;Parent=MS.gene064731.t1 |
| chr3.4 | exon | 97610195 | 97610241 | 97610195 | ID=MS.gene064731.t1.exon3;Parent=MS.gene064731.t1 |
| chr3.4 | CDS | 97610195 | 97610241 | 97610195 | ID=cds.MS.gene064731.t1;Parent=MS.gene064731.t1 |
| chr3.4 | exon | 97609991 | 97610109 | 97609991 | ID=MS.gene064731.t1.exon4;Parent=MS.gene064731.t1 |
| chr3.4 | CDS | 97609991 | 97610109 | 97609991 | ID=cds.MS.gene064731.t1;Parent=MS.gene064731.t1 |
| chr3.4 | exon | 97609726 | 97609886 | 97609726 | ID=MS.gene064731.t1.exon5;Parent=MS.gene064731.t1 |
| chr3.4 | CDS | 97609726 | 97609886 | 97609726 | ID=cds.MS.gene064731.t1;Parent=MS.gene064731.t1 |
| chr3.4 | exon | 97608447 | 97608556 | 97608447 | ID=MS.gene064731.t1.exon6;Parent=MS.gene064731.t1 |
| chr3.4 | CDS | 97608447 | 97608556 | 97608447 | ID=cds.MS.gene064731.t1;Parent=MS.gene064731.t1 |
| chr3.4 | exon | 97608262 | 97608361 | 97608262 | ID=MS.gene064731.t1.exon7;Parent=MS.gene064731.t1 |
| chr3.4 | CDS | 97608262 | 97608361 | 97608262 | ID=cds.MS.gene064731.t1;Parent=MS.gene064731.t1 |
| chr3.4 | exon | 97607171 | 97607294 | 97607171 | ID=MS.gene064731.t1.exon8;Parent=MS.gene064731.t1 |
| chr3.4 | CDS | 97607171 | 97607294 | 97607171 | ID=cds.MS.gene064731.t1;Parent=MS.gene064731.t1 |
| chr3.4 | exon | 97606962 | 97607087 | 97606962 | ID=MS.gene064731.t1.exon9;Parent=MS.gene064731.t1 |
| chr3.4 | CDS | 97606962 | 97607087 | 97606962 | ID=cds.MS.gene064731.t1;Parent=MS.gene064731.t1 |
| Gene Sequence |
| Protein sequence |
