Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06482.t1 | XP_003602483.1 | 94.1 | 358 | 17 | 2 | 1 | 356 | 1 | 356 | 2.50E-167 | 598.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06482.t1 | Q9SJ04 | 51.7 | 356 | 155 | 7 | 7 | 351 | 18 | 367 | 2.1e-90 | 334.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06482.t1 | G7JAA2 | 94.1 | 358 | 17 | 2 | 1 | 356 | 1 | 356 | 1.8e-167 | 598.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049362 | MS.gene06482 | 0.872878 | 2.27E-67 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene06482 | MS.gene40382 | PPI |
MS.gene06482 | MS.gene073014 | PPI |
MS.gene06482 | MS.gene014725 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06482.t1 | MTR_3g094850 | 96.648 | 358 | 8 | 2 | 1 | 356 | 1 | 356 | 0.0 | 703 |
MS.gene06482.t1 | MTR_8g030940 | 30.337 | 267 | 156 | 8 | 4 | 250 | 20 | 276 | 5.69e-28 | 112 |
MS.gene06482.t1 | MTR_4g114110 | 30.547 | 311 | 192 | 12 | 2 | 294 | 74 | 378 | 5.95e-26 | 108 |
MS.gene06482.t1 | MTR_8g085600 | 28.947 | 304 | 192 | 11 | 9 | 294 | 77 | 374 | 5.37e-25 | 105 |
MS.gene06482.t1 | MTR_2g019230 | 29.252 | 294 | 179 | 11 | 9 | 280 | 52 | 338 | 4.16e-24 | 102 |
MS.gene06482.t1 | MTR_3g073640 | 24.638 | 345 | 181 | 8 | 4 | 270 | 38 | 381 | 4.45e-22 | 97.4 |
MS.gene06482.t1 | MTR_7g066320 | 93.478 | 46 | 1 | 1 | 1 | 46 | 32 | 75 | 1.73e-19 | 82.0 |
MS.gene06482.t1 | MTR_2g008440 | 24.207 | 347 | 183 | 7 | 4 | 270 | 38 | 384 | 7.39e-19 | 87.8 |
MS.gene06482.t1 | MTR_8g080370 | 27.848 | 237 | 151 | 7 | 4 | 224 | 46 | 278 | 1.34e-18 | 86.7 |
MS.gene06482.t1 | MTR_3g085570 | 29.493 | 217 | 138 | 7 | 5 | 212 | 31 | 241 | 2.79e-16 | 79.7 |
MS.gene06482.t1 | MTR_2g094093 | 25.723 | 311 | 195 | 11 | 6 | 290 | 17 | 317 | 6.74e-16 | 78.6 |
MS.gene06482.t1 | MTR_7g095220 | 30.612 | 196 | 115 | 5 | 7 | 186 | 2 | 192 | 1.27e-15 | 77.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06482.t1 | AT2G21950 | 55.618 | 356 | 141 | 7 | 7 | 351 | 18 | 367 | 3.78e-138 | 397 |
MS.gene06482.t1 | AT4G39550 | 38.421 | 380 | 194 | 12 | 5 | 353 | 19 | 389 | 6.05e-72 | 229 |
MS.gene06482.t1 | AT4G39580 | 35.657 | 373 | 204 | 13 | 2 | 350 | 9 | 369 | 1.73e-63 | 207 |
MS.gene06482.t1 | AT4G39240 | 34.078 | 358 | 203 | 10 | 13 | 356 | 37 | 375 | 1.26e-60 | 199 |
MS.gene06482.t1 | AT5G49000 | 35.537 | 363 | 204 | 14 | 11 | 356 | 23 | 372 | 2.08e-56 | 188 |
MS.gene06482.t1 | AT4G23580 | 36.141 | 368 | 194 | 14 | 1 | 340 | 9 | 363 | 1.87e-55 | 186 |
MS.gene06482.t1 | AT4G39590 | 36.340 | 377 | 194 | 17 | 10 | 355 | 38 | 399 | 8.48e-55 | 185 |
MS.gene06482.t1 | AT4G33900 | 36.134 | 357 | 186 | 14 | 13 | 340 | 15 | 358 | 8.53e-55 | 184 |
MS.gene06482.t1 | AT5G48990 | 34.465 | 383 | 204 | 14 | 2 | 356 | 9 | 372 | 2.46e-54 | 183 |
MS.gene06482.t1 | AT4G11770 | 32.346 | 405 | 196 | 15 | 10 | 356 | 12 | 396 | 9.29e-51 | 174 |
MS.gene06482.t1 | AT4G29370 | 31.081 | 370 | 223 | 12 | 6 | 356 | 22 | 378 | 1.49e-50 | 173 |
MS.gene06482.t1 | AT1G60570 | 34.037 | 379 | 221 | 14 | 1 | 356 | 9 | 381 | 9.01e-50 | 171 |
MS.gene06482.t1 | AT4G19330 | 32.044 | 362 | 206 | 11 | 13 | 351 | 34 | 378 | 3.66e-48 | 167 |
MS.gene06482.t1 | AT3G43710 | 33.718 | 347 | 207 | 11 | 10 | 342 | 26 | 363 | 5.83e-48 | 166 |
MS.gene06482.t1 | AT4G39290 | 31.818 | 374 | 211 | 13 | 2 | 350 | 5 | 359 | 1.31e-47 | 165 |
MS.gene06482.t1 | AT4G39600 | 33.516 | 364 | 201 | 14 | 11 | 350 | 15 | 361 | 2.02e-47 | 164 |
MS.gene06482.t1 | AT4G39600 | 33.516 | 364 | 201 | 14 | 11 | 350 | 26 | 372 | 2.44e-47 | 165 |
MS.gene06482.t1 | AT4G19870 | 31.746 | 378 | 210 | 10 | 15 | 356 | 35 | 400 | 4.10e-47 | 164 |
MS.gene06482.t1 | AT4G19870 | 31.746 | 378 | 210 | 10 | 15 | 356 | 35 | 400 | 4.10e-47 | 164 |
MS.gene06482.t1 | AT4G14905 | 30.994 | 342 | 203 | 10 | 15 | 342 | 36 | 358 | 8.92e-47 | 163 |
MS.gene06482.t1 | AT4G14905 | 30.994 | 342 | 203 | 10 | 15 | 342 | 36 | 358 | 8.92e-47 | 163 |
MS.gene06482.t1 | AT2G29600 | 32.514 | 366 | 218 | 13 | 11 | 356 | 59 | 415 | 2.36e-46 | 163 |
MS.gene06482.t1 | AT2G29810 | 33.604 | 369 | 225 | 12 | 1 | 356 | 22 | 383 | 4.20e-46 | 161 |
MS.gene06482.t1 | AT1G19930 | 34.444 | 360 | 182 | 11 | 1 | 340 | 1 | 326 | 5.11e-45 | 157 |
MS.gene06482.t1 | AT4G39570 | 33.245 | 376 | 210 | 14 | 10 | 356 | 32 | 395 | 2.15e-44 | 157 |
MS.gene06482.t1 | AT4G34170 | 34.564 | 298 | 168 | 10 | 13 | 305 | 15 | 290 | 3.74e-44 | 154 |
MS.gene06482.t1 | AT2G29830 | 31.215 | 362 | 204 | 14 | 2 | 333 | 13 | 359 | 3.77e-44 | 156 |
MS.gene06482.t1 | AT5G49000 | 32.571 | 350 | 188 | 14 | 11 | 356 | 23 | 328 | 1.31e-43 | 154 |
MS.gene06482.t1 | AT4G35120 | 32.970 | 367 | 222 | 11 | 10 | 356 | 27 | 389 | 1.60e-43 | 155 |
MS.gene06482.t1 | AT2G29770 | 32.162 | 370 | 216 | 15 | 2 | 348 | 22 | 379 | 2.78e-43 | 154 |
MS.gene06482.t1 | AT4G38940 | 32.249 | 369 | 211 | 13 | 9 | 356 | 20 | 370 | 3.52e-43 | 154 |
MS.gene06482.t1 | AT4G39756 | 30.769 | 364 | 212 | 13 | 12 | 351 | 22 | 369 | 1.14e-42 | 152 |
MS.gene06482.t1 | AT1G61540 | 33.333 | 387 | 205 | 18 | 10 | 356 | 27 | 400 | 2.63e-42 | 152 |
MS.gene06482.t1 | AT5G51250 | 33.155 | 374 | 217 | 13 | 10 | 356 | 1 | 368 | 5.27e-42 | 150 |
MS.gene06482.t1 | AT4G11750 | 31.186 | 388 | 217 | 12 | 10 | 356 | 8 | 386 | 2.71e-41 | 149 |
MS.gene06482.t1 | AT2G21680 | 32.090 | 402 | 201 | 18 | 13 | 356 | 42 | 429 | 1.33e-40 | 148 |
MS.gene06482.t1 | AT5G38680 | 31.593 | 364 | 194 | 12 | 6 | 344 | 12 | 345 | 4.12e-40 | 145 |
MS.gene06482.t1 | AT2G22030 | 32.626 | 377 | 215 | 14 | 4 | 355 | 20 | 382 | 2.77e-39 | 143 |
MS.gene06482.t1 | AT3G06570 | 31.319 | 364 | 214 | 13 | 13 | 349 | 29 | 383 | 3.17e-39 | 143 |
MS.gene06482.t1 | AT3G27910 | 34.615 | 260 | 150 | 9 | 105 | 356 | 47 | 294 | 3.20e-39 | 141 |
MS.gene06482.t1 | AT3G46050 | 34.332 | 367 | 188 | 15 | 2 | 341 | 5 | 345 | 6.35e-39 | 142 |
MS.gene06482.t1 | AT1G19470 | 31.956 | 363 | 220 | 15 | 13 | 356 | 58 | 412 | 8.23e-39 | 143 |
MS.gene06482.t1 | AT4G39760 | 29.973 | 367 | 219 | 14 | 12 | 356 | 19 | 369 | 3.71e-38 | 140 |
MS.gene06482.t1 | AT2G29780 | 31.398 | 379 | 214 | 13 | 5 | 356 | 39 | 398 | 8.16e-38 | 140 |
MS.gene06482.t1 | AT4G19865 | 29.679 | 374 | 216 | 12 | 15 | 356 | 35 | 393 | 8.79e-38 | 140 |
MS.gene06482.t1 | AT1G19460 | 30.601 | 366 | 225 | 13 | 13 | 356 | 58 | 416 | 2.74e-37 | 139 |
MS.gene06482.t1 | AT5G48980 | 32.021 | 381 | 207 | 18 | 11 | 355 | 33 | 397 | 5.42e-37 | 137 |
MS.gene06482.t1 | AT5G39560 | 32.267 | 375 | 197 | 16 | 12 | 344 | 31 | 390 | 1.36e-36 | 137 |
MS.gene06482.t1 | AT2G44030 | 31.956 | 363 | 198 | 14 | 12 | 347 | 21 | 361 | 3.37e-36 | 135 |
MS.gene06482.t1 | AT4G39560 | 38.618 | 246 | 137 | 7 | 1 | 235 | 18 | 260 | 3.65e-36 | 132 |
MS.gene06482.t1 | AT4G39560 | 38.618 | 246 | 137 | 7 | 1 | 235 | 18 | 260 | 3.65e-36 | 132 |
MS.gene06482.t1 | AT5G02980 | 34.006 | 347 | 176 | 12 | 7 | 341 | 11 | 316 | 9.77e-36 | 133 |
MS.gene06482.t1 | AT5G03000 | 33.043 | 345 | 173 | 13 | 8 | 341 | 38 | 335 | 1.11e-35 | 133 |
MS.gene06482.t1 | AT2G44630 | 31.832 | 333 | 190 | 10 | 12 | 323 | 26 | 342 | 3.07e-35 | 132 |
MS.gene06482.t1 | AT4G11745 | 34.100 | 261 | 147 | 12 | 107 | 356 | 36 | 282 | 2.40e-34 | 128 |
MS.gene06482.t1 | AT4G19250 | 34.034 | 238 | 138 | 8 | 117 | 351 | 2 | 223 | 6.31e-34 | 125 |
MS.gene06482.t1 | AT2G29800 | 30.769 | 351 | 211 | 11 | 13 | 343 | 63 | 401 | 1.15e-33 | 129 |
MS.gene06482.t1 | AT2G29780 | 34.328 | 268 | 149 | 8 | 2 | 250 | 36 | 295 | 1.78e-33 | 127 |
MS.gene06482.t1 | AT2G29820 | 31.098 | 328 | 194 | 13 | 22 | 333 | 53 | 364 | 2.61e-33 | 127 |
MS.gene06482.t1 | AT4G25710 | 30.108 | 372 | 225 | 10 | 11 | 356 | 28 | 390 | 2.83e-33 | 127 |
MS.gene06482.t1 | AT5G28160 | 27.701 | 361 | 185 | 11 | 12 | 350 | 12 | 318 | 1.48e-30 | 119 |
MS.gene06482.t1 | AT5G28180 | 27.322 | 366 | 181 | 14 | 12 | 350 | 39 | 346 | 6.80e-30 | 117 |
MS.gene06482.t1 | AT2G22050 | 36.596 | 235 | 114 | 12 | 12 | 223 | 33 | 255 | 2.25e-29 | 114 |
MS.gene06482.t1 | AT2G22050 | 36.797 | 231 | 111 | 12 | 12 | 219 | 33 | 251 | 8.24e-29 | 112 |
MS.gene06482.t1 | AT3G24610 | 28.084 | 381 | 183 | 12 | 4 | 342 | 22 | 353 | 3.29e-28 | 113 |
MS.gene06482.t1 | AT2G44700 | 28.771 | 358 | 227 | 12 | 9 | 355 | 27 | 367 | 3.93e-28 | 113 |
MS.gene06482.t1 | AT2G03460 | 31.197 | 234 | 150 | 6 | 124 | 350 | 21 | 250 | 1.03e-27 | 109 |
MS.gene06482.t1 | AT4G02310 | 29.526 | 359 | 220 | 14 | 3 | 350 | 6 | 342 | 1.22e-27 | 111 |
MS.gene06482.t1 | AT1G55270 | 28.032 | 371 | 222 | 13 | 9 | 352 | 78 | 430 | 2.13e-27 | 112 |
MS.gene06482.t1 | AT2G29860 | 34.928 | 209 | 123 | 7 | 6 | 206 | 15 | 218 | 2.40e-26 | 105 |
MS.gene06482.t1 | AT3G10510 | 27.671 | 365 | 210 | 14 | 2 | 333 | 7 | 350 | 4.31e-26 | 107 |
MS.gene06482.t1 | AT2G20380 | 26.684 | 386 | 209 | 16 | 2 | 356 | 6 | 348 | 5.82e-26 | 107 |
MS.gene06482.t1 | AT3G08810 | 27.688 | 372 | 195 | 11 | 2 | 349 | 15 | 336 | 6.03e-26 | 106 |
MS.gene06482.t1 | AT4G39753 | 27.624 | 362 | 227 | 14 | 15 | 354 | 40 | 388 | 6.84e-26 | 107 |
MS.gene06482.t1 | AT2G41360 | 27.676 | 383 | 230 | 19 | 1 | 351 | 1 | 368 | 4.05e-25 | 105 |
MS.gene06482.t1 | AT5G03020 | 29.769 | 346 | 199 | 11 | 15 | 348 | 22 | 335 | 4.58e-25 | 104 |
MS.gene06482.t1 | AT4G25710 | 31.667 | 240 | 142 | 5 | 11 | 228 | 28 | 267 | 2.63e-22 | 95.5 |
MS.gene06482.t1 | AT5G38670 | 27.147 | 361 | 188 | 17 | 1 | 356 | 1 | 291 | 7.98e-22 | 94.4 |
MS.gene06482.t1 | AT1G67480 | 29.710 | 276 | 170 | 9 | 9 | 266 | 39 | 308 | 2.25e-21 | 94.4 |
MS.gene06482.t1 | AT1G67480 | 29.710 | 276 | 170 | 9 | 9 | 266 | 39 | 308 | 2.25e-21 | 94.4 |
MS.gene06482.t1 | AT1G67480 | 29.710 | 276 | 170 | 9 | 9 | 266 | 39 | 308 | 2.25e-21 | 94.4 |
MS.gene06482.t1 | AT1G22040 | 26.124 | 356 | 180 | 8 | 9 | 281 | 43 | 398 | 4.70e-21 | 94.4 |
MS.gene06482.t1 | AT3G61350 | 27.138 | 269 | 173 | 10 | 9 | 265 | 21 | 278 | 5.43e-21 | 93.2 |
MS.gene06482.t1 | AT3G61350 | 27.138 | 269 | 173 | 10 | 9 | 265 | 21 | 278 | 5.43e-21 | 93.2 |
MS.gene06482.t1 | AT4G36840 | 30.667 | 225 | 130 | 8 | 138 | 342 | 1 | 219 | 8.39e-21 | 90.5 |
MS.gene06482.t1 | AT1G30090 | 28.125 | 320 | 191 | 12 | 9 | 302 | 53 | 359 | 7.72e-20 | 90.1 |
MS.gene06482.t1 | AT5G02995 | 27.848 | 316 | 194 | 9 | 29 | 332 | 2 | 295 | 1.26e-19 | 88.6 |
MS.gene06482.t1 | AT1G27420 | 27.719 | 285 | 181 | 10 | 3 | 268 | 4 | 282 | 8.70e-18 | 84.0 |
MS.gene06482.t1 | AT4G36840 | 30.097 | 206 | 120 | 7 | 138 | 323 | 1 | 202 | 9.06e-17 | 78.6 |
MS.gene06482.t1 | AT3G63220 | 25.806 | 310 | 200 | 11 | 2 | 294 | 4 | 300 | 1.05e-16 | 80.9 |
MS.gene06482.t1 | AT3G63220 | 25.806 | 310 | 200 | 11 | 2 | 294 | 4 | 300 | 1.05e-16 | 80.9 |
MS.gene06482.t1 | AT2G24540 | 25.175 | 286 | 192 | 10 | 3 | 270 | 22 | 303 | 2.24e-16 | 80.1 |
MS.gene06482.t1 | AT3G63220 | 26.230 | 305 | 195 | 11 | 7 | 294 | 2 | 293 | 2.36e-16 | 79.7 |
MS.gene06482.t1 | AT2G45406 | 40.964 | 83 | 47 | 2 | 109 | 190 | 1 | 82 | 1.33e-13 | 67.4 |
MS.gene06482.t1 | AT5G02990 | 35.556 | 135 | 83 | 2 | 16 | 146 | 24 | 158 | 2.86e-13 | 67.4 |
MS.gene06482.t1 | AT1G16250 | 26.639 | 244 | 153 | 8 | 6 | 227 | 5 | 244 | 5.20e-12 | 67.0 |
MS.gene06482.t1 | AT1G16250 | 26.639 | 244 | 153 | 8 | 6 | 227 | 5 | 244 | 5.20e-12 | 67.0 |
MS.gene06482.t1 | AT5G60570 | 24.883 | 213 | 148 | 6 | 1 | 210 | 41 | 244 | 5.80e-12 | 67.0 |
MS.gene06482.t1 | AT5G60570 | 24.883 | 213 | 148 | 6 | 1 | 210 | 41 | 244 | 5.80e-12 | 67.0 |
MS.gene06482.t1 | AT5G60570 | 24.883 | 213 | 148 | 6 | 1 | 210 | 41 | 244 | 5.80e-12 | 67.0 |
Find 146 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTATTGCTATGATTATTT+AGG | 0.101723 | 3.2:+79317691 | MS.gene06482:CDS |
TGGGAAATTGGTTGTGGTTT+GGG | 0.195904 | 3.2:+79317819 | MS.gene06482:CDS |
AGAATAAGGATGGGGAATTA+TGG | 0.232884 | 3.2:+79317923 | MS.gene06482:CDS |
ATCCATTTCTCACGAATTTC+TGG | 0.252013 | 3.2:-79317520 | None:intergenic |
ATGGGATCAGGTTTGAGTTT+TGG | 0.259611 | 3.2:-79316967 | None:intergenic |
GACCCGTGCAAGGCAGTTTA+TGG | 0.265673 | 3.2:-79317008 | None:intergenic |
TGTATTGCTATGATTATTTA+GGG | 0.266313 | 3.2:+79317692 | MS.gene06482:CDS |
TGATTATTTAGGGAAAATTA+AGG | 0.267251 | 3.2:+79317702 | MS.gene06482:CDS |
GTGGGAAATTGGTTGTGGTT+TGG | 0.275006 | 3.2:+79317818 | MS.gene06482:CDS |
CTCTCCCACGCGCCGTTATA+AGG | 0.283691 | 3.2:-79317610 | None:intergenic |
CAGTTTATGGCTACGTCGTC+TGG | 0.300590 | 3.2:-79316995 | None:intergenic |
GGCTGATGTTGGTGGGAAAT+TGG | 0.300862 | 3.2:+79317807 | MS.gene06482:CDS |
AAGGAAGAGGAGGGAGAGGG+AGG | 0.303836 | 3.2:-79317210 | None:intergenic |
CTTTCCCAGCGGTTGGTAAC+AGG | 0.327535 | 3.2:-79317484 | None:intergenic |
GTTGGGAGGGAGCTTGATTT+AGG | 0.327637 | 3.2:+79317634 | MS.gene06482:CDS |
GGGGAAGGAAGAGGAGGGAG+AGG | 0.332205 | 3.2:-79317214 | None:intergenic |
AATTATGGGGTGAAGTTTGT+TGG | 0.338791 | 3.2:+79317938 | MS.gene06482:CDS |
GTGGAGAAGAGAGGAGAGAA+TGG | 0.338796 | 3.2:-79317075 | None:intergenic |
GAATAAGGATGGGGAATTAT+GGG | 0.351182 | 3.2:+79317924 | MS.gene06482:CDS |
GCGCGTGAATTCGCCGCTGC+TGG | 0.373544 | 3.2:+79317376 | MS.gene06482:CDS |
CGCGACGCGCATGGAGGGAC+CGG | 0.384207 | 3.2:-79317356 | None:intergenic |
GAGGAGAGAATGGATTGGTT+TGG | 0.385212 | 3.2:-79317065 | None:intergenic |
CGGGGAGCCAGCGGTGGAAT+CGG | 0.393995 | 3.2:-79317336 | None:intergenic |
GGAGGAGACGGTGGTTATTG+TGG | 0.394778 | 3.2:-79317192 | None:intergenic |
GAGGAGGGAGAGGGAGGAGA+CGG | 0.398264 | 3.2:-79317204 | None:intergenic |
CACCAGAAATTCGTGAGAAA+TGG | 0.399575 | 3.2:+79317518 | MS.gene06482:CDS |
AGGGGAAAGAAATGGAGATT+TGG | 0.400105 | 3.2:+79317872 | MS.gene06482:CDS |
CTCAGACCAATTGGCTGACC+TGG | 0.409808 | 3.2:-79317452 | None:intergenic |
GAGAGAGGTAGAGGATGTGT+TGG | 0.414107 | 3.2:-79317132 | None:intergenic |
TTGATTGCCGATTCCACCGC+TGG | 0.415692 | 3.2:+79317329 | MS.gene06482:CDS |
TATTGTGGAGGGTGAAGAAT+TGG | 0.417411 | 3.2:-79317177 | None:intergenic |
TGAACAATGGAAGATCCTTT+AGG | 0.424469 | 3.2:-79317982 | None:intergenic |
GTGGAAGGAGTTGAAAGGTT+TGG | 0.425255 | 3.2:+79317747 | MS.gene06482:CDS |
CGTCTGGGAGGGATGGGATC+AGG | 0.425632 | 3.2:-79316979 | None:intergenic |
AATGTTCTTTCTGTTCCTAA+AGG | 0.426640 | 3.2:+79317967 | MS.gene06482:CDS |
GATTATTTAGGGAAAATTAA+GGG | 0.427665 | 3.2:+79317703 | MS.gene06482:CDS |
ACGGCGCGTGGGAGAGCGTT+GGG | 0.443660 | 3.2:+79317617 | MS.gene06482:CDS |
TTGGTTTGGAAACGAGGGTG+AGG | 0.443707 | 3.2:-79317051 | None:intergenic |
CCGCTGCTGGTGTTATCAAC+GGG | 0.445241 | 3.2:+79317389 | MS.gene06482:CDS |
GCTACGTCGTCTGGGAGGGA+TGG | 0.445851 | 3.2:-79316986 | None:intergenic |
ATGTACCATCTCGTCATGTA+TGG | 0.447118 | 3.2:+79317302 | MS.gene06482:CDS |
CGATTCCACCGCTGGCTCCC+CGG | 0.454099 | 3.2:+79317337 | MS.gene06482:CDS |
ATCGAAAACCTCAGACCAAT+TGG | 0.454196 | 3.2:-79317461 | None:intergenic |
TAGAGGATGTGTTGGGTGGA+AGG | 0.455700 | 3.2:-79317124 | None:intergenic |
CTACGTCGTCTGGGAGGGAT+GGG | 0.457938 | 3.2:-79316985 | None:intergenic |
GAGGGAGAGGGAGGAGACGG+TGG | 0.459896 | 3.2:-79317201 | None:intergenic |
AAGAAGAAGAAGAATAAGGA+TGG | 0.461286 | 3.2:+79317913 | MS.gene06482:CDS |
GGAGGGAGCTTGATTTAGGT+TGG | 0.464558 | 3.2:+79317638 | MS.gene06482:CDS |
GGGAAGGAAGAGGAGGGAGA+GGG | 0.467938 | 3.2:-79317213 | None:intergenic |
GCGTAAGCGGAGCCGATTGT+AGG | 0.471244 | 3.2:-79317235 | None:intergenic |
CGTAAGCGGAGCCGATTGTA+GGG | 0.471976 | 3.2:-79317234 | None:intergenic |
GTGTGCGGAGAGAGAGGTAG+AGG | 0.475726 | 3.2:-79317141 | None:intergenic |
TGTTGGTGGGAAATTGGTTG+TGG | 0.476458 | 3.2:+79317813 | MS.gene06482:CDS |
CCTCTTCCTTCCCCTACAAT+CGG | 0.477902 | 3.2:+79317223 | MS.gene06482:CDS |
TCGATCCTGTTACCAACCGC+TGG | 0.491929 | 3.2:+79317479 | MS.gene06482:CDS |
AGAGGATGTGTTGGGTGGAA+GGG | 0.494197 | 3.2:-79317123 | None:intergenic |
AGCGGTGGAATCGGCAATCA+AGG | 0.496819 | 3.2:-79317327 | None:intergenic |
AAATAAGAAGGGGAAAGAAA+TGG | 0.497591 | 3.2:+79317864 | MS.gene06482:CDS |
GCGACGCGCATGGAGGGACC+GGG | 0.501360 | 3.2:-79317355 | None:intergenic |
TGGTTTGGAAACGAGGGTGA+GGG | 0.501416 | 3.2:-79317050 | None:intergenic |
AGGGTTGTGTGGTGAGAGCG+TGG | 0.503990 | 3.2:-79317031 | None:intergenic |
TCACGAATTTCTGGTGGACT+AGG | 0.504253 | 3.2:-79317511 | None:intergenic |
GAAGAGAGGAGAGAATGGAT+TGG | 0.505986 | 3.2:-79317070 | None:intergenic |
GTTTACCAAGGTTTCTGTGT+GGG | 0.506144 | 3.2:+79317776 | MS.gene06482:CDS |
CAGGTCAGCCAATTGGTCTG+AGG | 0.506793 | 3.2:+79317453 | MS.gene06482:CDS |
AGGGACCGGGGAGCCAGCGG+TGG | 0.509897 | 3.2:-79317342 | None:intergenic |
GGGAGAGCAACTGTTGTGGA+TGG | 0.510495 | 3.2:+79317664 | MS.gene06482:CDS |
GCTACAATGGCTGATGTTGG+TGG | 0.511043 | 3.2:+79317799 | MS.gene06482:CDS |
GAATTTGAATGCAAATAAGA+AGG | 0.511518 | 3.2:+79317852 | MS.gene06482:CDS |
CACGCTAGCGCGGTCGTAGA+CGG | 0.513221 | 3.2:+79317544 | MS.gene06482:CDS |
AGAGAGGTAGAGGATGTGTT+GGG | 0.517370 | 3.2:-79317131 | None:intergenic |
AATTTGAATGCAAATAAGAA+GGG | 0.517396 | 3.2:+79317853 | MS.gene06482:CDS |
TTGTGGTTTGGGAGTGTCAA+AGG | 0.519615 | 3.2:+79317830 | MS.gene06482:CDS |
CATTTCTCACGAATTTCTGG+TGG | 0.520076 | 3.2:-79317517 | None:intergenic |
GGTGAAGAATTGGAGAGAGG+TGG | 0.521152 | 3.2:-79317167 | None:intergenic |
GTTTCTGTGTGGGGCTACAA+TGG | 0.522064 | 3.2:+79317786 | MS.gene06482:CDS |
CCGATTGTAGGGGAAGGAAG+AGG | 0.526253 | 3.2:-79317223 | None:intergenic |
AATGGATTGGTTTGGAAACG+AGG | 0.527115 | 3.2:-79317057 | None:intergenic |
CGTCATCGGTGGTTGCGTGC+CGG | 0.527892 | 3.2:+79317420 | MS.gene06482:CDS |
GAGGTAGAGGATGTGTTGGG+TGG | 0.532415 | 3.2:-79317128 | None:intergenic |
TGAAGAAGAGTGGAGAAGAG+AGG | 0.534364 | 3.2:-79317084 | None:intergenic |
GGGGCTACAATGGCTGATGT+TGG | 0.535073 | 3.2:+79317796 | MS.gene06482:CDS |
AGAAGAAGAAGAATAAGGAT+GGG | 0.535671 | 3.2:+79317914 | MS.gene06482:CDS |
TAGCCATAAACTGCCTTGCA+CGG | 0.537984 | 3.2:+79317005 | MS.gene06482:CDS |
TGGAGCGTGTGCGGAGAGAG+AGG | 0.541247 | 3.2:-79317147 | None:intergenic |
GCCGCTGCTGGTGTTATCAA+CGG | 0.547810 | 3.2:+79317388 | MS.gene06482:CDS |
TTTACCAAGGTTTCTGTGTG+GGG | 0.550464 | 3.2:+79317777 | MS.gene06482:CDS |
TCACGCGCGACGCGCATGGA+GGG | 0.550890 | 3.2:-79317361 | None:intergenic |
AGCTTGATTTAGGTTGGCGC+GGG | 0.552408 | 3.2:+79317644 | MS.gene06482:CDS |
GAATTCACGCGCGACGCGCA+TGG | 0.553981 | 3.2:-79317365 | None:intergenic |
AGGAACACTTTCCCAGCGGT+TGG | 0.557279 | 3.2:-79317491 | None:intergenic |
GGAGACGGTGGTTATTGTGG+AGG | 0.557706 | 3.2:-79317189 | None:intergenic |
CTACAATGGCTGATGTTGGT+GGG | 0.559479 | 3.2:+79317800 | MS.gene06482:CDS |
TGGAGGGACCGGGGAGCCAG+CGG | 0.559843 | 3.2:-79317345 | None:intergenic |
AACGGCGCGTGGGAGAGCGT+TGG | 0.560168 | 3.2:+79317616 | MS.gene06482:CDS |
TATGGCTACGTCGTCTGGGA+GGG | 0.561867 | 3.2:-79316990 | None:intergenic |
GAGCGAGCGGTGAAGAAGAG+TGG | 0.563340 | 3.2:-79317094 | None:intergenic |
GAAGAAGAAGAATAAGGATG+GGG | 0.563686 | 3.2:+79317915 | MS.gene06482:CDS |
CGATCCTGTTACCAACCGCT+GGG | 0.564306 | 3.2:+79317480 | MS.gene06482:CDS |
CGCGTGGGAGAGCGTTGGGA+GGG | 0.565591 | 3.2:+79317621 | MS.gene06482:CDS |
GAGAGCGTGGGACCCGTGCA+AGG | 0.565651 | 3.2:-79317018 | None:intergenic |
GGAGAGAGGTGGAGCGTGTG+CGG | 0.565891 | 3.2:-79317156 | None:intergenic |
AGTTTATGGCTACGTCGTCT+GGG | 0.567545 | 3.2:-79316994 | None:intergenic |
ATTGTAGGGGAAGGAAGAGG+AGG | 0.569549 | 3.2:-79317220 | None:intergenic |
AGCCATAAACTGCCTTGCAC+GGG | 0.572097 | 3.2:+79317006 | MS.gene06482:CDS |
TTGATCCTTATAACGGCGCG+TGG | 0.574303 | 3.2:+79317605 | MS.gene06482:CDS |
ATGGATTGGTTTGGAAACGA+GGG | 0.575321 | 3.2:-79317056 | None:intergenic |
GAGGGTGAAGAATTGGAGAG+AGG | 0.589538 | 3.2:-79317170 | None:intergenic |
GAGCTTGATTTAGGTTGGCG+CGG | 0.591579 | 3.2:+79317643 | MS.gene06482:CDS |
CCCGTTGATAACACCAGCAG+CGG | 0.593565 | 3.2:-79317389 | None:intergenic |
GGAGAGCAACTGTTGTGGAT+GGG | 0.594745 | 3.2:+79317665 | MS.gene06482:CDS |
GCGCGTGGGAGAGCGTTGGG+AGG | 0.596820 | 3.2:+79317620 | MS.gene06482:CDS |
AATAAGGATGGGGAATTATG+GGG | 0.597570 | 3.2:+79317925 | MS.gene06482:CDS |
CACCACAAAATCTACCTCAT+CGG | 0.600911 | 3.2:+79317265 | MS.gene06482:CDS |
TTGTAGGGGAAGGAAGAGGA+GGG | 0.601044 | 3.2:-79317219 | None:intergenic |
CGACGCGCATGGAGGGACCG+GGG | 0.602014 | 3.2:-79317354 | None:intergenic |
TTATGGCTACGTCGTCTGGG+AGG | 0.604755 | 3.2:-79316991 | None:intergenic |
AAACGAGGGTGAGGGTTGTG+TGG | 0.611470 | 3.2:-79317042 | None:intergenic |
AACGGGAAAATCTACGTCAT+CGG | 0.611762 | 3.2:+79317406 | MS.gene06482:CDS |
GTGGTGGATGACAGCGTAAG+CGG | 0.611973 | 3.2:-79317248 | None:intergenic |
GTAGCCCCACACAGAAACCT+TGG | 0.612328 | 3.2:-79317781 | None:intergenic |
TTGATGTGAAGAAAGGGTTG+TGG | 0.612357 | 3.2:+79317728 | MS.gene06482:CDS |
TGATCCTTATAACGGCGCGT+GGG | 0.620505 | 3.2:+79317606 | MS.gene06482:CDS |
GCGGAGCCGATTGTAGGGGA+AGG | 0.620894 | 3.2:-79317229 | None:intergenic |
GGGTTGTGGAAGGAGTTGAA+AGG | 0.624861 | 3.2:+79317742 | MS.gene06482:CDS |
AGGATCCATACATGACGAGA+TGG | 0.628694 | 3.2:-79317307 | None:intergenic |
ATTTGAATGCAAATAAGAAG+GGG | 0.632620 | 3.2:+79317854 | MS.gene06482:CDS |
CACAAAATCTACCTCATCGG+TGG | 0.633655 | 3.2:+79317268 | MS.gene06482:CDS |
GGGAAAATCTACGTCATCGG+TGG | 0.638696 | 3.2:+79317409 | MS.gene06482:CDS |
TTCACGCGCGACGCGCATGG+AGG | 0.638860 | 3.2:-79317362 | None:intergenic |
GAGACGGTGGTTATTGTGGA+GGG | 0.639572 | 3.2:-79317188 | None:intergenic |
GGAAGGGATGAGAGAGCGAG+CGG | 0.643411 | 3.2:-79317107 | None:intergenic |
GCGCGGGAGAGCAACTGTTG+TGG | 0.648340 | 3.2:+79317660 | MS.gene06482:CDS |
TACGCGATGGCGGATCGCGG+TGG | 0.651378 | 3.2:+79317574 | MS.gene06482:CDS |
AACAGAAGAACAATGAACAA+TGG | 0.652676 | 3.2:-79317995 | None:intergenic |
GTTTACGCGATGGCGGATCG+CGG | 0.654239 | 3.2:+79317571 | MS.gene06482:CDS |
TGTGAAGAAAGGGTTGTGGA+AGG | 0.655527 | 3.2:+79317732 | MS.gene06482:CDS |
AGACGGCAAAGTTTACGCGA+TGG | 0.658808 | 3.2:+79317561 | MS.gene06482:CDS |
GGGTTGTGTGGTGAGAGCGT+GGG | 0.659765 | 3.2:-79317030 | None:intergenic |
CGGCAAAGTTTACGCGATGG+CGG | 0.661397 | 3.2:+79317564 | MS.gene06482:CDS |
GAAATGGATGCACGCTAGCG+CGG | 0.679178 | 3.2:+79317534 | MS.gene06482:CDS |
AGTTTACCAAGGTTTCTGTG+TGG | 0.681635 | 3.2:+79317775 | MS.gene06482:CDS |
GTTTGGATAAGAGTTTACCA+AGG | 0.687199 | 3.2:+79317764 | MS.gene06482:CDS |
GACTAGGAACACTTTCCCAG+CGG | 0.689950 | 3.2:-79317495 | None:intergenic |
CGTTGACTGAACCACCGATG+AGG | 0.690906 | 3.2:-79317279 | None:intergenic |
GTAAGCGGAGCCGATTGTAG+GGG | 0.695680 | 3.2:-79317233 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTTGAATGCAAATAAGAA+GGG | + | chr3.2:79317853-79317872 | MS.gene06482:CDS | 20.0% |
!! | GATTATTTAGGGAAAATTAA+GGG | + | chr3.2:79317703-79317722 | MS.gene06482:CDS | 20.0% |
!! | TGATTATTTAGGGAAAATTA+AGG | + | chr3.2:79317702-79317721 | MS.gene06482:CDS | 20.0% |
!! | TGTATTGCTATGATTATTTA+GGG | + | chr3.2:79317692-79317711 | MS.gene06482:CDS | 20.0% |
!! | TTGTATTGCTATGATTATTT+AGG | + | chr3.2:79317691-79317710 | MS.gene06482:CDS | 20.0% |
! | ATTTGAATGCAAATAAGAAG+GGG | + | chr3.2:79317854-79317873 | MS.gene06482:CDS | 25.0% |
! | GAATTTGAATGCAAATAAGA+AGG | + | chr3.2:79317852-79317871 | MS.gene06482:CDS | 25.0% |
!!! | GTTTTGTTTGATCCTTATAA+CGG | + | chr3.2:79317598-79317617 | MS.gene06482:CDS | 25.0% |
AAATAAGAAGGGGAAAGAAA+TGG | + | chr3.2:79317864-79317883 | MS.gene06482:CDS | 30.0% | |
AACAGAAGAACAATGAACAA+TGG | - | chr3.2:79317998-79318017 | None:intergenic | 30.0% | |
AAGAAGAAGAAGAATAAGGA+TGG | + | chr3.2:79317913-79317932 | MS.gene06482:CDS | 30.0% | |
AATGTTCTTTCTGTTCCTAA+AGG | + | chr3.2:79317967-79317986 | MS.gene06482:CDS | 30.0% | |
AGAAGAAGAAGAATAAGGAT+GGG | + | chr3.2:79317914-79317933 | MS.gene06482:CDS | 30.0% | |
TGTGAAGAAGAAGAAGAATA+AGG | + | chr3.2:79317909-79317928 | MS.gene06482:CDS | 30.0% | |
AATAAGGATGGGGAATTATG+GGG | + | chr3.2:79317925-79317944 | MS.gene06482:CDS | 35.0% | |
AATTATGGGGTGAAGTTTGT+TGG | + | chr3.2:79317938-79317957 | MS.gene06482:CDS | 35.0% | |
AGAATAAGGATGGGGAATTA+TGG | + | chr3.2:79317923-79317942 | MS.gene06482:CDS | 35.0% | |
ATCCATTTCTCACGAATTTC+TGG | - | chr3.2:79317523-79317542 | None:intergenic | 35.0% | |
GAAGAAGAAGAATAAGGATG+GGG | + | chr3.2:79317915-79317934 | MS.gene06482:CDS | 35.0% | |
GAATAAGGATGGGGAATTAT+GGG | + | chr3.2:79317924-79317943 | MS.gene06482:CDS | 35.0% | |
GTTTGGATAAGAGTTTACCA+AGG | + | chr3.2:79317764-79317783 | MS.gene06482:CDS | 35.0% | |
TGAACAATGGAAGATCCTTT+AGG | - | chr3.2:79317985-79318004 | None:intergenic | 35.0% | |
!! | AAGGGTTTTGATGTGAAGAA+AGG | + | chr3.2:79317721-79317740 | MS.gene06482:CDS | 35.0% |
!! | AGGGTTTTGATGTGAAGAAA+GGG | + | chr3.2:79317722-79317741 | MS.gene06482:CDS | 35.0% |
AACGGGAAAATCTACGTCAT+CGG | + | chr3.2:79317406-79317425 | MS.gene06482:CDS | 40.0% | |
AGGGGAAAGAAATGGAGATT+TGG | + | chr3.2:79317872-79317891 | MS.gene06482:CDS | 40.0% | |
AGTTTACCAAGGTTTCTGTG+TGG | + | chr3.2:79317775-79317794 | MS.gene06482:CDS | 40.0% | |
ATCGAAAACCTCAGACCAAT+TGG | - | chr3.2:79317464-79317483 | None:intergenic | 40.0% | |
ATGTACCATCTCGTCATGTA+TGG | + | chr3.2:79317302-79317321 | MS.gene06482:CDS | 40.0% | |
CACCACAAAATCTACCTCAT+CGG | + | chr3.2:79317265-79317284 | MS.gene06482:CDS | 40.0% | |
CACCAGAAATTCGTGAGAAA+TGG | + | chr3.2:79317518-79317537 | MS.gene06482:CDS | 40.0% | |
GCTGACCTGGAAAAATTATC+CGG | - | chr3.2:79317442-79317461 | None:intergenic | 40.0% | |
GTTTACCAAGGTTTCTGTGT+GGG | + | chr3.2:79317776-79317795 | MS.gene06482:CDS | 40.0% | |
TATTGTGGAGGGTGAAGAAT+TGG | - | chr3.2:79317180-79317199 | None:intergenic | 40.0% | |
TGGGAAATTGGTTGTGGTTT+GGG | + | chr3.2:79317819-79317838 | MS.gene06482:CDS | 40.0% | |
TTGATGTGAAGAAAGGGTTG+TGG | + | chr3.2:79317728-79317747 | MS.gene06482:CDS | 40.0% | |
TTTACCAAGGTTTCTGTGTG+GGG | + | chr3.2:79317777-79317796 | MS.gene06482:CDS | 40.0% | |
! | ATTTTTCCAGGTCAGCCAAT+TGG | + | chr3.2:79317446-79317465 | MS.gene06482:CDS | 40.0% |
! | CATTTCTCACGAATTTCTGG+TGG | - | chr3.2:79317520-79317539 | None:intergenic | 40.0% |
!! | AATGGATTGGTTTGGAAACG+AGG | - | chr3.2:79317060-79317079 | None:intergenic | 40.0% |
!! | ATGGATTGGTTTGGAAACGA+GGG | - | chr3.2:79317059-79317078 | None:intergenic | 40.0% |
!! | ATGGGATCAGGTTTGAGTTT+TGG | - | chr3.2:79316970-79316989 | None:intergenic | 40.0% |
AGAGAGGTAGAGGATGTGTT+GGG | - | chr3.2:79317134-79317153 | None:intergenic | 45.0% | |
AGGATCCATACATGACGAGA+TGG | - | chr3.2:79317310-79317329 | None:intergenic | 45.0% | |
AGTTTATGGCTACGTCGTCT+GGG | - | chr3.2:79316997-79317016 | None:intergenic | 45.0% | |
CACAAAATCTACCTCATCGG+TGG | + | chr3.2:79317268-79317287 | MS.gene06482:CDS | 45.0% | |
CTACAATGGCTGATGTTGGT+GGG | + | chr3.2:79317800-79317819 | MS.gene06482:CDS | 45.0% | |
GAAGAGAGGAGAGAATGGAT+TGG | - | chr3.2:79317073-79317092 | None:intergenic | 45.0% | |
GTGGAAGGAGTTGAAAGGTT+TGG | + | chr3.2:79317747-79317766 | MS.gene06482:CDS | 45.0% | |
GTGGGAAATTGGTTGTGGTT+TGG | + | chr3.2:79317818-79317837 | MS.gene06482:CDS | 45.0% | |
TAGCCATAAACTGCCTTGCA+CGG | + | chr3.2:79317005-79317024 | MS.gene06482:CDS | 45.0% | |
TGAAGAAGAGTGGAGAAGAG+AGG | - | chr3.2:79317087-79317106 | None:intergenic | 45.0% | |
TGTGAAGAAAGGGTTGTGGA+AGG | + | chr3.2:79317732-79317751 | MS.gene06482:CDS | 45.0% | |
! | CACCGATGAGGTAGATTTTG+TGG | - | chr3.2:79317270-79317289 | None:intergenic | 45.0% |
! | CGATGAGGTAGATTTTGTGG+TGG | - | chr3.2:79317267-79317286 | None:intergenic | 45.0% |
! | TGTTGGTGGGAAATTGGTTG+TGG | + | chr3.2:79317813-79317832 | MS.gene06482:CDS | 45.0% |
!! | GAGGAGAGAATGGATTGGTT+TGG | - | chr3.2:79317068-79317087 | None:intergenic | 45.0% |
!! | TCACGAATTTCTGGTGGACT+AGG | - | chr3.2:79317514-79317533 | None:intergenic | 45.0% |
!! | TTGTGGTTTGGGAGTGTCAA+AGG | + | chr3.2:79317830-79317849 | MS.gene06482:CDS | 45.0% |
AGACGGCAAAGTTTACGCGA+TGG | + | chr3.2:79317561-79317580 | MS.gene06482:CDS | 50.0% | |
AGAGGATGTGTTGGGTGGAA+GGG | - | chr3.2:79317126-79317145 | None:intergenic | 50.0% | |
AGCCATAAACTGCCTTGCAC+GGG | + | chr3.2:79317006-79317025 | MS.gene06482:CDS | 50.0% | |
ATTGTAGGGGAAGGAAGAGG+AGG | - | chr3.2:79317223-79317242 | None:intergenic | 50.0% | |
CAGTTTATGGCTACGTCGTC+TGG | - | chr3.2:79316998-79317017 | None:intergenic | 50.0% | |
CCTCTTCCTTCCCCTACAAT+CGG | + | chr3.2:79317223-79317242 | MS.gene06482:CDS | 50.0% | |
GACTAGGAACACTTTCCCAG+CGG | - | chr3.2:79317498-79317517 | None:intergenic | 50.0% | |
GAGACGGTGGTTATTGTGGA+GGG | - | chr3.2:79317191-79317210 | None:intergenic | 50.0% | |
GAGAGAGGTAGAGGATGTGT+TGG | - | chr3.2:79317135-79317154 | None:intergenic | 50.0% | |
GAGGGTGAAGAATTGGAGAG+AGG | - | chr3.2:79317173-79317192 | None:intergenic | 50.0% | |
GCTACAATGGCTGATGTTGG+TGG | + | chr3.2:79317799-79317818 | MS.gene06482:CDS | 50.0% | |
GGAGAGCAACTGTTGTGGAT+GGG | + | chr3.2:79317665-79317684 | MS.gene06482:CDS | 50.0% | |
GGAGGGAGCTTGATTTAGGT+TGG | + | chr3.2:79317638-79317657 | MS.gene06482:CDS | 50.0% | |
GGGAAAATCTACGTCATCGG+TGG | + | chr3.2:79317409-79317428 | MS.gene06482:CDS | 50.0% | |
GGGTTGTGGAAGGAGTTGAA+AGG | + | chr3.2:79317742-79317761 | MS.gene06482:CDS | 50.0% | |
GGTGAAGAATTGGAGAGAGG+TGG | - | chr3.2:79317170-79317189 | None:intergenic | 50.0% | |
GTGGAGAAGAGAGGAGAGAA+TGG | - | chr3.2:79317078-79317097 | None:intergenic | 50.0% | |
GTTGGGAGGGAGCTTGATTT+AGG | + | chr3.2:79317634-79317653 | MS.gene06482:CDS | 50.0% | |
GTTTCTGTGTGGGGCTACAA+TGG | + | chr3.2:79317786-79317805 | MS.gene06482:CDS | 50.0% | |
TAGAGGATGTGTTGGGTGGA+AGG | - | chr3.2:79317127-79317146 | None:intergenic | 50.0% | |
TGATCCTTATAACGGCGCGT+GGG | + | chr3.2:79317606-79317625 | MS.gene06482:CDS | 50.0% | |
TTGATCCTTATAACGGCGCG+TGG | + | chr3.2:79317605-79317624 | MS.gene06482:CDS | 50.0% | |
TTGTAGGGGAAGGAAGAGGA+GGG | - | chr3.2:79317222-79317241 | None:intergenic | 50.0% | |
! | GCGTGCCGGATAATTTTTCC+AGG | + | chr3.2:79317434-79317453 | MS.gene06482:CDS | 50.0% |
! | GGCTGATGTTGGTGGGAAAT+TGG | + | chr3.2:79317807-79317826 | MS.gene06482:CDS | 50.0% |
! | TGGTTTGGAAACGAGGGTGA+GGG | - | chr3.2:79317053-79317072 | None:intergenic | 50.0% |
!! | AGCTTGATTTAGGTTGGCGC+GGG | + | chr3.2:79317644-79317663 | MS.gene06482:CDS | 50.0% |
!! | GAGCTTGATTTAGGTTGGCG+CGG | + | chr3.2:79317643-79317662 | MS.gene06482:CDS | 50.0% |
!! | TTGGTTTGGAAACGAGGGTG+AGG | - | chr3.2:79317054-79317073 | None:intergenic | 50.0% |
AAACGAGGGTGAGGGTTGTG+TGG | - | chr3.2:79317045-79317064 | None:intergenic | 55.0% | |
AGCGGTGGAATCGGCAATCA+AGG | - | chr3.2:79317330-79317349 | None:intergenic | 55.0% | |
AGGAACACTTTCCCAGCGGT+TGG | - | chr3.2:79317494-79317513 | None:intergenic | 55.0% | |
CCGATTGTAGGGGAAGGAAG+AGG | - | chr3.2:79317226-79317245 | None:intergenic | 55.0% | |
CGATCCTGTTACCAACCGCT+GGG | + | chr3.2:79317480-79317499 | MS.gene06482:CDS | 55.0% | |
CGGCAAAGTTTACGCGATGG+CGG | + | chr3.2:79317564-79317583 | MS.gene06482:CDS | 55.0% | |
CGTAAGCGGAGCCGATTGTA+GGG | - | chr3.2:79317237-79317256 | None:intergenic | 55.0% | |
CTCAGACCAATTGGCTGACC+TGG | - | chr3.2:79317455-79317474 | None:intergenic | 55.0% | |
GAAATGGATGCACGCTAGCG+CGG | + | chr3.2:79317534-79317553 | MS.gene06482:CDS | 55.0% | |
GACCCGTGCAAGGCAGTTTA+TGG | - | chr3.2:79317011-79317030 | None:intergenic | 55.0% | |
GAGGTAGAGGATGTGTTGGG+TGG | - | chr3.2:79317131-79317150 | None:intergenic | 55.0% | |
GGAGACGGTGGTTATTGTGG+AGG | - | chr3.2:79317192-79317211 | None:intergenic | 55.0% | |
GGAGGAGACGGTGGTTATTG+TGG | - | chr3.2:79317195-79317214 | None:intergenic | 55.0% | |
GGGAGAGCAACTGTTGTGGA+TGG | + | chr3.2:79317664-79317683 | MS.gene06482:CDS | 55.0% | |
GGGGCTACAATGGCTGATGT+TGG | + | chr3.2:79317796-79317815 | MS.gene06482:CDS | 55.0% | |
GTAAGCGGAGCCGATTGTAG+GGG | - | chr3.2:79317236-79317255 | None:intergenic | 55.0% | |
GTAGCCCCACACAGAAACCT+TGG | - | chr3.2:79317784-79317803 | None:intergenic | 55.0% | |
TATGGCTACGTCGTCTGGGA+GGG | - | chr3.2:79316993-79317012 | None:intergenic | 55.0% | |
TCGATCCTGTTACCAACCGC+TGG | + | chr3.2:79317479-79317498 | MS.gene06482:CDS | 55.0% | |
TTATGGCTACGTCGTCTGGG+AGG | - | chr3.2:79316994-79317013 | None:intergenic | 55.0% | |
! | CAGGTCAGCCAATTGGTCTG+AGG | + | chr3.2:79317453-79317472 | MS.gene06482:CDS | 55.0% |
! | CGTTGACTGAACCACCGATG+AGG | - | chr3.2:79317282-79317301 | None:intergenic | 55.0% |
!! | CCCGTTGATAACACCAGCAG+CGG | - | chr3.2:79317392-79317411 | None:intergenic | 55.0% |
!! | CCGCTGCTGGTGTTATCAAC+GGG | + | chr3.2:79317389-79317408 | MS.gene06482:CDS | 55.0% |
!! | CTTTCCCAGCGGTTGGTAAC+AGG | - | chr3.2:79317487-79317506 | None:intergenic | 55.0% |
!! | GCCGCTGCTGGTGTTATCAA+CGG | + | chr3.2:79317388-79317407 | MS.gene06482:CDS | 55.0% |
!! | GTGGTGGATGACAGCGTAAG+CGG | - | chr3.2:79317251-79317270 | None:intergenic | 55.0% |
!! | TTGATTGCCGATTCCACCGC+TGG | + | chr3.2:79317329-79317348 | MS.gene06482:CDS | 55.0% |
AAGGAAGAGGAGGGAGAGGG+AGG | - | chr3.2:79317213-79317232 | None:intergenic | 60.0% | |
AGGGTTGTGTGGTGAGAGCG+TGG | - | chr3.2:79317034-79317053 | None:intergenic | 60.0% | |
CTACGTCGTCTGGGAGGGAT+GGG | - | chr3.2:79316988-79317007 | None:intergenic | 60.0% | |
CTCTCCCACGCGCCGTTATA+AGG | - | chr3.2:79317613-79317632 | None:intergenic | 60.0% | |
GAGCGAGCGGTGAAGAAGAG+TGG | - | chr3.2:79317097-79317116 | None:intergenic | 60.0% | |
GCGTAAGCGGAGCCGATTGT+AGG | - | chr3.2:79317238-79317257 | None:intergenic | 60.0% | |
GGAAGGGATGAGAGAGCGAG+CGG | - | chr3.2:79317110-79317129 | None:intergenic | 60.0% | |
GGGAAGGAAGAGGAGGGAGA+GGG | - | chr3.2:79317216-79317235 | None:intergenic | 60.0% | |
GTGTGCGGAGAGAGAGGTAG+AGG | - | chr3.2:79317144-79317163 | None:intergenic | 60.0% | |
! | GGGTTGTGTGGTGAGAGCGT+GGG | - | chr3.2:79317033-79317052 | None:intergenic | 60.0% |
!! | GTTTACGCGATGGCGGATCG+CGG | + | chr3.2:79317571-79317590 | MS.gene06482:CDS | 60.0% |
CACGCTAGCGCGGTCGTAGA+CGG | + | chr3.2:79317544-79317563 | MS.gene06482:CDS | 65.0% | |
CGTCATCGGTGGTTGCGTGC+CGG | + | chr3.2:79317420-79317439 | MS.gene06482:CDS | 65.0% | |
CGTCTGGGAGGGATGGGATC+AGG | - | chr3.2:79316982-79317001 | None:intergenic | 65.0% | |
GAATTCACGCGCGACGCGCA+TGG | - | chr3.2:79317368-79317387 | None:intergenic | 65.0% | |
GAGGAGGGAGAGGGAGGAGA+CGG | - | chr3.2:79317207-79317226 | None:intergenic | 65.0% | |
GCGCGGGAGAGCAACTGTTG+TGG | + | chr3.2:79317660-79317679 | MS.gene06482:CDS | 65.0% | |
GCGGAGCCGATTGTAGGGGA+AGG | - | chr3.2:79317232-79317251 | None:intergenic | 65.0% | |
GCTACGTCGTCTGGGAGGGA+TGG | - | chr3.2:79316989-79317008 | None:intergenic | 65.0% | |
GGAGAGAGGTGGAGCGTGTG+CGG | - | chr3.2:79317159-79317178 | None:intergenic | 65.0% | |
GGGGAAGGAAGAGGAGGGAG+AGG | - | chr3.2:79317217-79317236 | None:intergenic | 65.0% | |
TGGAGCGTGTGCGGAGAGAG+AGG | - | chr3.2:79317150-79317169 | None:intergenic | 65.0% | |
CGGGGAGCCAGCGGTGGAAT+CGG | - | chr3.2:79317339-79317358 | None:intergenic | 70.0% | |
GAGGGAGAGGGAGGAGACGG+TGG | - | chr3.2:79317204-79317223 | None:intergenic | 70.0% | |
GCGCGTGAATTCGCCGCTGC+TGG | + | chr3.2:79317376-79317395 | MS.gene06482:CDS | 70.0% | |
TCACGCGCGACGCGCATGGA+GGG | - | chr3.2:79317364-79317383 | None:intergenic | 70.0% | |
TTCACGCGCGACGCGCATGG+AGG | - | chr3.2:79317365-79317384 | None:intergenic | 70.0% | |
! | AACGGCGCGTGGGAGAGCGT+TGG | + | chr3.2:79317616-79317635 | MS.gene06482:CDS | 70.0% |
! | GAGAGCGTGGGACCCGTGCA+AGG | - | chr3.2:79317021-79317040 | None:intergenic | 70.0% |
!! | ACGGCGCGTGGGAGAGCGTT+GGG | + | chr3.2:79317617-79317636 | MS.gene06482:CDS | 70.0% |
!! | CGATTCCACCGCTGGCTCCC+CGG | + | chr3.2:79317337-79317356 | MS.gene06482:CDS | 70.0% |
!! | CGCGTGGGAGAGCGTTGGGA+GGG | + | chr3.2:79317621-79317640 | MS.gene06482:CDS | 70.0% |
!! | TACGCGATGGCGGATCGCGG+TGG | + | chr3.2:79317574-79317593 | MS.gene06482:CDS | 70.0% |
CGACGCGCATGGAGGGACCG+GGG | - | chr3.2:79317357-79317376 | None:intergenic | 75.0% | |
CGCGACGCGCATGGAGGGAC+CGG | - | chr3.2:79317359-79317378 | None:intergenic | 75.0% | |
GCGACGCGCATGGAGGGACC+GGG | - | chr3.2:79317358-79317377 | None:intergenic | 75.0% | |
TGGAGGGACCGGGGAGCCAG+CGG | - | chr3.2:79317348-79317367 | None:intergenic | 75.0% | |
!! | GCGCGTGGGAGAGCGTTGGG+AGG | + | chr3.2:79317620-79317639 | MS.gene06482:CDS | 75.0% |
! | AGGGACCGGGGAGCCAGCGG+TGG | - | chr3.2:79317345-79317364 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 79316956 | 79318026 | 79316956 | ID=MS.gene06482 |
chr3.2 | mRNA | 79316956 | 79318026 | 79316956 | ID=MS.gene06482.t1;Parent=MS.gene06482 |
chr3.2 | exon | 79316956 | 79318026 | 79316956 | ID=MS.gene06482.t1.exon1;Parent=MS.gene06482.t1 |
chr3.2 | CDS | 79316956 | 79318026 | 79316956 | ID=cds.MS.gene06482.t1;Parent=MS.gene06482.t1 |
Gene Sequence |
Protein sequence |