Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065050.t1 | XP_013470283.1 | 97.6 | 210 | 5 | 0 | 1 | 210 | 1 | 210 | 2.00E-111 | 411.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065050.t1 | Q9SR72 | 59.0 | 210 | 76 | 3 | 10 | 209 | 12 | 221 | 6.2e-66 | 251.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065050.t1 | A0A072VRM6 | 97.6 | 210 | 5 | 0 | 1 | 210 | 1 | 210 | 1.4e-111 | 411.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene065050 | 0.835153 | 1.98E-56 | -1.69E-46 |
| MS.gene049178 | MS.gene065050 | 0.803162 | 3.98E-49 | -1.69E-46 |
| MS.gene04917 | MS.gene065050 | 0.83021 | 3.34E-55 | -1.69E-46 |
| MS.gene049378 | MS.gene065050 | 0.805138 | 1.54E-49 | -1.69E-46 |
| MS.gene04984 | MS.gene065050 | 0.801823 | 7.51E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene065050 | 0.818106 | 2.33E-52 | -1.69E-46 |
| MS.gene050763 | MS.gene065050 | 0.815922 | 7.21E-52 | -1.69E-46 |
| MS.gene052302 | MS.gene065050 | 0.802348 | 5.85E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene065050 | 0.804805 | 1.81E-49 | -1.69E-46 |
| MS.gene052856 | MS.gene065050 | 0.801668 | 8.08E-49 | -1.69E-46 |
| MS.gene054379 | MS.gene065050 | 0.826882 | 2.13E-54 | -1.69E-46 |
| MS.gene056830 | MS.gene065050 | -0.801683 | 8.02E-49 | -1.69E-46 |
| MS.gene060869 | MS.gene065050 | 0.875114 | 3.98E-68 | -1.69E-46 |
| MS.gene060870 | MS.gene065050 | 0.82987 | 4.04E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065050.t1 | MTR_1g112200 | 97.619 | 210 | 5 | 0 | 1 | 210 | 1 | 210 | 8.48e-150 | 414 |
| MS.gene065050.t1 | MTR_1g060120 | 55.882 | 204 | 79 | 1 | 17 | 209 | 20 | 223 | 1.09e-80 | 240 |
| MS.gene065050.t1 | MTR_1g085500 | 42.857 | 210 | 113 | 3 | 7 | 209 | 7 | 216 | 1.35e-53 | 171 |
| MS.gene065050.t1 | MTR_7g111240 | 45.596 | 193 | 99 | 4 | 22 | 209 | 19 | 210 | 5.73e-53 | 169 |
| MS.gene065050.t1 | MTR_7g111240 | 44.898 | 196 | 99 | 4 | 22 | 209 | 19 | 213 | 2.58e-52 | 167 |
| MS.gene065050.t1 | MTR_1g085140 | 43.719 | 199 | 103 | 4 | 19 | 209 | 20 | 217 | 4.00e-51 | 165 |
| MS.gene065050.t1 | MTR_1g079490 | 44.554 | 202 | 97 | 6 | 19 | 207 | 18 | 217 | 6.39e-48 | 157 |
| MS.gene065050.t1 | MTR_6g005340 | 45.161 | 217 | 102 | 8 | 5 | 207 | 2 | 215 | 8.91e-48 | 156 |
| MS.gene065050.t1 | MTR_6g005330 | 44.907 | 216 | 101 | 8 | 7 | 207 | 3 | 215 | 9.30e-48 | 156 |
| MS.gene065050.t1 | MTR_6g005310 | 45.161 | 217 | 102 | 8 | 5 | 207 | 2 | 215 | 2.05e-47 | 155 |
| MS.gene065050.t1 | MTR_6g005360 | 44.907 | 216 | 104 | 7 | 5 | 207 | 2 | 215 | 3.80e-47 | 154 |
| MS.gene065050.t1 | MTR_4g017050 | 42.786 | 201 | 99 | 7 | 19 | 206 | 18 | 215 | 4.54e-44 | 147 |
| MS.gene065050.t1 | MTR_5g046410 | 42.786 | 201 | 99 | 7 | 19 | 206 | 18 | 215 | 5.29e-44 | 147 |
| MS.gene065050.t1 | MTR_5g046430 | 42.786 | 201 | 99 | 7 | 19 | 206 | 18 | 215 | 5.29e-44 | 147 |
| MS.gene065050.t1 | MTR_4g017030 | 42.786 | 201 | 99 | 7 | 19 | 206 | 18 | 215 | 5.29e-44 | 147 |
| MS.gene065050.t1 | MTR_4g017040 | 41.204 | 216 | 106 | 8 | 9 | 206 | 3 | 215 | 1.54e-43 | 145 |
| MS.gene065050.t1 | MTR_2g019250 | 42.786 | 201 | 99 | 7 | 19 | 206 | 18 | 215 | 2.71e-43 | 145 |
| MS.gene065050.t1 | MTR_1g023770 | 39.604 | 202 | 115 | 4 | 11 | 207 | 10 | 209 | 3.14e-43 | 144 |
| MS.gene065050.t1 | MTR_2g031270 | 42.021 | 188 | 101 | 5 | 27 | 207 | 27 | 213 | 5.07e-43 | 144 |
| MS.gene065050.t1 | MTR_2g030855 | 41.026 | 195 | 107 | 5 | 20 | 207 | 19 | 212 | 5.93e-43 | 144 |
| MS.gene065050.t1 | MTR_5g036570 | 40.722 | 194 | 107 | 4 | 22 | 207 | 26 | 219 | 5.32e-41 | 139 |
| MS.gene065050.t1 | MTR_2g041570 | 37.255 | 204 | 119 | 3 | 9 | 205 | 3 | 204 | 1.45e-38 | 132 |
| MS.gene065050.t1 | MTR_2g041580 | 37.438 | 203 | 118 | 3 | 9 | 204 | 3 | 203 | 1.49e-38 | 132 |
| MS.gene065050.t1 | MTR_2g030895 | 43.023 | 172 | 92 | 4 | 42 | 207 | 7 | 178 | 2.78e-38 | 130 |
| MS.gene065050.t1 | MTR_2g041550 | 37.313 | 201 | 121 | 2 | 9 | 204 | 3 | 203 | 2.93e-38 | 131 |
| MS.gene065050.t1 | MTR_6g005350 | 40.196 | 204 | 100 | 6 | 19 | 207 | 18 | 214 | 4.44e-38 | 131 |
| MS.gene065050.t1 | MTR_2g030865 | 42.442 | 172 | 93 | 4 | 42 | 207 | 7 | 178 | 5.79e-37 | 127 |
| MS.gene065050.t1 | MTR_8g020590 | 36.538 | 208 | 114 | 5 | 10 | 205 | 1 | 202 | 1.48e-36 | 127 |
| MS.gene065050.t1 | MTR_3g019710 | 34.783 | 207 | 124 | 5 | 8 | 207 | 3 | 205 | 2.72e-35 | 124 |
| MS.gene065050.t1 | MTR_8g020630 | 35.922 | 206 | 123 | 6 | 8 | 207 | 3 | 205 | 3.84e-35 | 123 |
| MS.gene065050.t1 | MTR_8g020610 | 33.010 | 206 | 129 | 4 | 8 | 207 | 1 | 203 | 1.77e-34 | 122 |
| MS.gene065050.t1 | MTR_2g086640 | 34.762 | 210 | 111 | 5 | 12 | 208 | 8 | 204 | 1.83e-34 | 122 |
| MS.gene065050.t1 | MTR_2g036120 | 32.843 | 204 | 132 | 2 | 8 | 207 | 3 | 205 | 2.89e-34 | 121 |
| MS.gene065050.t1 | MTR_2g045100 | 37.079 | 178 | 105 | 4 | 33 | 207 | 32 | 205 | 1.03e-33 | 120 |
| MS.gene065050.t1 | MTR_8g020650 | 37.968 | 187 | 107 | 6 | 27 | 207 | 22 | 205 | 1.94e-33 | 119 |
| MS.gene065050.t1 | MTR_3g019680 | 35.266 | 207 | 119 | 5 | 8 | 207 | 6 | 204 | 4.50e-33 | 118 |
| MS.gene065050.t1 | MTR_6g005380 | 38.916 | 203 | 107 | 6 | 7 | 197 | 9 | 206 | 1.34e-32 | 117 |
| MS.gene065050.t1 | MTR_3g019650 | 35.749 | 207 | 118 | 6 | 8 | 207 | 6 | 204 | 2.70e-32 | 116 |
| MS.gene065050.t1 | MTR_8g020670 | 34.483 | 203 | 124 | 5 | 11 | 207 | 6 | 205 | 3.36e-32 | 116 |
| MS.gene065050.t1 | MTR_4g010340 | 33.673 | 196 | 121 | 4 | 16 | 207 | 11 | 201 | 4.09e-32 | 115 |
| MS.gene065050.t1 | MTR_2g044040 | 32.683 | 205 | 131 | 4 | 8 | 207 | 3 | 205 | 1.20e-31 | 114 |
| MS.gene065050.t1 | MTR_4g052770 | 33.491 | 212 | 121 | 5 | 5 | 208 | 7 | 206 | 3.00e-31 | 113 |
| MS.gene065050.t1 | MTR_8g020763 | 34.706 | 170 | 107 | 3 | 40 | 207 | 19 | 186 | 3.96e-31 | 112 |
| MS.gene065050.t1 | MTR_2g086620 | 32.212 | 208 | 119 | 5 | 12 | 208 | 9 | 205 | 8.53e-31 | 112 |
| MS.gene065050.t1 | MTR_2g086630 | 32.212 | 208 | 119 | 5 | 12 | 208 | 9 | 205 | 9.19e-31 | 112 |
| MS.gene065050.t1 | MTR_8g020750 | 33.010 | 206 | 131 | 3 | 8 | 207 | 4 | 208 | 9.30e-31 | 112 |
| MS.gene065050.t1 | MTR_8g007300 | 34.759 | 187 | 114 | 2 | 22 | 200 | 25 | 211 | 1.60e-30 | 112 |
| MS.gene065050.t1 | MTR_3g096330 | 41.176 | 170 | 88 | 2 | 15 | 172 | 563 | 732 | 1.62e-30 | 118 |
| MS.gene065050.t1 | MTR_0284s0010 | 31.220 | 205 | 134 | 4 | 8 | 207 | 3 | 205 | 2.07e-30 | 111 |
| MS.gene065050.t1 | MTR_4g052780 | 38.125 | 160 | 95 | 2 | 53 | 208 | 47 | 206 | 2.87e-30 | 111 |
| MS.gene065050.t1 | MTR_8g020760 | 33.810 | 210 | 123 | 8 | 8 | 207 | 4 | 207 | 4.48e-29 | 108 |
| MS.gene065050.t1 | MTR_2g031300 | 41.875 | 160 | 68 | 4 | 42 | 196 | 7 | 146 | 8.63e-29 | 105 |
| MS.gene065050.t1 | MTR_7g011340 | 31.892 | 185 | 121 | 2 | 27 | 207 | 22 | 205 | 1.27e-28 | 107 |
| MS.gene065050.t1 | MTR_3g073170 | 35.263 | 190 | 102 | 6 | 29 | 207 | 27 | 206 | 1.64e-28 | 106 |
| MS.gene065050.t1 | MTR_5g031460 | 29.412 | 204 | 139 | 2 | 8 | 207 | 3 | 205 | 5.35e-28 | 105 |
| MS.gene065050.t1 | MTR_8g020770 | 30.583 | 206 | 136 | 3 | 8 | 207 | 4 | 208 | 1.25e-27 | 104 |
| MS.gene065050.t1 | MTR_2g019780 | 32.086 | 187 | 112 | 7 | 29 | 207 | 29 | 208 | 4.23e-25 | 97.8 |
| MS.gene065050.t1 | MTR_3g019810 | 28.846 | 208 | 133 | 5 | 3 | 204 | 104 | 302 | 1.04e-20 | 88.2 |
| MS.gene065050.t1 | MTR_4g027415 | 33.333 | 123 | 75 | 4 | 27 | 144 | 22 | 142 | 3.11e-14 | 67.4 |
| MS.gene065050.t1 | MTR_2g072560 | 31.579 | 114 | 72 | 3 | 8 | 116 | 3 | 115 | 6.59e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065050.t1 | AT3G10080 | 59.709 | 206 | 71 | 3 | 13 | 209 | 19 | 221 | 2.34e-85 | 252 |
| MS.gene065050.t1 | AT3G10080 | 59.709 | 206 | 71 | 3 | 13 | 209 | 90 | 292 | 1.08e-84 | 253 |
| MS.gene065050.t1 | AT1G02335 | 42.791 | 215 | 115 | 4 | 1 | 207 | 1 | 215 | 3.12e-56 | 178 |
| MS.gene065050.t1 | AT3G04200 | 45.540 | 213 | 103 | 5 | 8 | 209 | 14 | 224 | 3.17e-54 | 173 |
| MS.gene065050.t1 | AT1G18980 | 45.192 | 208 | 105 | 4 | 7 | 207 | 13 | 218 | 5.56e-53 | 169 |
| MS.gene065050.t1 | AT1G18970 | 42.788 | 208 | 110 | 4 | 7 | 207 | 13 | 218 | 1.41e-52 | 169 |
| MS.gene065050.t1 | AT5G38960 | 44.878 | 205 | 93 | 6 | 19 | 207 | 22 | 222 | 2.54e-51 | 165 |
| MS.gene065050.t1 | AT5G39160 | 41.827 | 208 | 111 | 5 | 7 | 207 | 11 | 215 | 3.10e-51 | 165 |
| MS.gene065050.t1 | AT5G39160 | 41.315 | 213 | 109 | 6 | 7 | 207 | 11 | 219 | 3.49e-51 | 165 |
| MS.gene065050.t1 | AT5G39130 | 40.845 | 213 | 110 | 6 | 7 | 207 | 11 | 219 | 5.22e-51 | 164 |
| MS.gene065050.t1 | AT3G62020 | 43.204 | 206 | 109 | 4 | 12 | 209 | 12 | 217 | 5.37e-51 | 164 |
| MS.gene065050.t1 | AT5G39190 | 41.315 | 213 | 109 | 6 | 7 | 207 | 11 | 219 | 6.01e-51 | 164 |
| MS.gene065050.t1 | AT5G26700 | 40.758 | 211 | 112 | 5 | 7 | 209 | 6 | 211 | 1.07e-50 | 163 |
| MS.gene065050.t1 | AT3G05950 | 44.393 | 214 | 104 | 6 | 7 | 208 | 12 | 222 | 6.89e-50 | 162 |
| MS.gene065050.t1 | AT1G09560 | 43.367 | 196 | 102 | 4 | 22 | 209 | 23 | 217 | 7.20e-50 | 161 |
| MS.gene065050.t1 | AT5G39110 | 41.475 | 217 | 112 | 6 | 5 | 207 | 5 | 220 | 1.73e-49 | 160 |
| MS.gene065050.t1 | AT3G05930 | 38.710 | 217 | 125 | 3 | 1 | 209 | 1 | 217 | 6.80e-49 | 159 |
| MS.gene065050.t1 | AT5G39180 | 41.315 | 213 | 111 | 5 | 8 | 207 | 8 | 219 | 7.36e-49 | 159 |
| MS.gene065050.t1 | AT5G39150 | 41.315 | 213 | 111 | 5 | 8 | 207 | 8 | 219 | 2.22e-48 | 158 |
| MS.gene065050.t1 | AT5G39120 | 41.096 | 219 | 112 | 6 | 5 | 207 | 2 | 219 | 5.65e-48 | 157 |
| MS.gene065050.t1 | AT3G62020 | 45.699 | 186 | 95 | 4 | 28 | 209 | 5 | 188 | 2.21e-47 | 154 |
| MS.gene065050.t1 | AT5G38910 | 41.860 | 215 | 110 | 6 | 6 | 207 | 7 | 219 | 7.18e-47 | 154 |
| MS.gene065050.t1 | AT5G38940 | 41.919 | 198 | 102 | 5 | 22 | 207 | 25 | 221 | 1.11e-46 | 154 |
| MS.gene065050.t1 | AT3G04170 | 42.254 | 213 | 109 | 6 | 8 | 210 | 13 | 221 | 1.64e-46 | 153 |
| MS.gene065050.t1 | AT5G38940 | 41.919 | 198 | 102 | 5 | 22 | 207 | 49 | 245 | 1.67e-46 | 154 |
| MS.gene065050.t1 | AT5G39160 | 39.614 | 207 | 99 | 6 | 7 | 207 | 11 | 197 | 7.79e-46 | 150 |
| MS.gene065050.t1 | AT5G39190 | 39.614 | 207 | 99 | 6 | 7 | 207 | 11 | 197 | 1.18e-45 | 150 |
| MS.gene065050.t1 | AT4G14630 | 40.000 | 200 | 106 | 5 | 21 | 207 | 24 | 222 | 2.64e-45 | 150 |
| MS.gene065050.t1 | AT3G04180 | 39.500 | 200 | 110 | 4 | 20 | 208 | 23 | 222 | 2.15e-44 | 147 |
| MS.gene065050.t1 | AT3G04150 | 39.623 | 212 | 115 | 5 | 8 | 208 | 13 | 222 | 3.18e-44 | 147 |
| MS.gene065050.t1 | AT5G38930 | 40.704 | 199 | 105 | 5 | 21 | 207 | 24 | 221 | 7.19e-44 | 146 |
| MS.gene065050.t1 | AT3G04190 | 40.097 | 207 | 99 | 6 | 20 | 208 | 23 | 222 | 2.79e-43 | 145 |
| MS.gene065050.t1 | AT3G04150 | 38.222 | 225 | 113 | 6 | 8 | 208 | 13 | 235 | 1.53e-42 | 144 |
| MS.gene065050.t1 | AT5G20630 | 38.798 | 183 | 107 | 2 | 27 | 204 | 22 | 204 | 2.25e-40 | 137 |
| MS.gene065050.t1 | AT1G10460 | 35.678 | 199 | 114 | 5 | 22 | 207 | 18 | 215 | 2.16e-38 | 132 |
| MS.gene065050.t1 | AT5G61750 | 38.983 | 177 | 101 | 3 | 9 | 178 | 5 | 181 | 8.03e-35 | 123 |
| MS.gene065050.t1 | AT1G72610 | 37.037 | 189 | 102 | 3 | 27 | 204 | 19 | 201 | 4.16e-34 | 121 |
| MS.gene065050.t1 | AT1G74820 | 31.390 | 223 | 134 | 6 | 2 | 208 | 7 | 226 | 1.32e-33 | 120 |
| MS.gene065050.t1 | AT5G38910 | 35.211 | 213 | 90 | 6 | 6 | 207 | 7 | 182 | 3.47e-30 | 110 |
| MS.gene065050.t1 | AT5G38950 | 50.794 | 63 | 29 | 1 | 138 | 198 | 2 | 64 | 4.72e-13 | 63.2 |
Find 20 sgRNAs with CRISPR-Local
Find 41 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGATTAAAGATGAGCTTT+TGG | 0.232327 | 1.2:+83023204 | MS.gene065050:CDS |
| GAATTTGTTATCTTCTGATT+TGG | 0.267937 | 1.2:-83022756 | None:intergenic |
| TTCTGATCCGGATCCTGTTA+TGG | 0.323739 | 1.2:+83022721 | MS.gene065050:CDS |
| CTAGTATCTTTGAAGTTTCC+TGG | 0.326307 | 1.2:-83022839 | None:intergenic |
| GTGAATTCAAATGTGTTTCC+AGG | 0.358885 | 1.2:+83022878 | MS.gene065050:CDS |
| TTTGGAGAAAGGTGAGGTTA+TGG | 0.393881 | 1.2:+83023060 | MS.gene065050:CDS |
| TGAAAATGCACAAGTCCTCT+TGG | 0.414763 | 1.2:-83023088 | None:intergenic |
| GCTATGCAGTAATCCATAAC+AGG | 0.434646 | 1.2:-83022734 | None:intergenic |
| ATAGCAACTTCTGTTGCTCT+TGG | 0.444865 | 1.2:-83022974 | None:intergenic |
| CAGTAATCCATAACAGGATC+CGG | 0.469062 | 1.2:-83022728 | None:intergenic |
| TTTCCAGGTTTAAACACTCT+TGG | 0.469660 | 1.2:+83022893 | MS.gene065050:CDS |
| CAGCAATGATGAAACACATA+AGG | 0.504374 | 1.2:-83022691 | None:intergenic |
| ACACATAAGGACTAAAAGAA+TGG | 0.521199 | 1.2:-83022678 | None:intergenic |
| AGAAGTTGCTATTGTGTTGG+AGG | 0.523101 | 1.2:+83022985 | MS.gene065050:CDS |
| AACAGAAGTTGCTATTGTGT+TGG | 0.541553 | 1.2:+83022982 | MS.gene065050:CDS |
| GAAGTTGCTATTGTGTTGGA+GGG | 0.567803 | 1.2:+83022986 | MS.gene065050:CDS |
| ACTCCAAGAGTGTTTAAACC+TGG | 0.567991 | 1.2:-83022896 | None:intergenic |
| GAAATCTTCAACTGTTGCTG+TGG | 0.571728 | 1.2:-83022795 | None:intergenic |
| AGCTTTCTAAGTTAAAGAAG+AGG | 0.576087 | 1.2:+83023254 | MS.gene065050:CDS |
| GTTGCTCTTGGATGAAAGTG+AGG | 0.618955 | 1.2:-83022962 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTCCAAATGTTGTTTT+TGG | + | chr1.2:83023178-83023197 | MS.gene065050:CDS | 20.0% |
| !! | AGATACTAGATTTTCTTCAA+TGG | + | chr1.2:83022853-83022872 | MS.gene065050:CDS | 25.0% |
| !! | CAAGATTTTTGCTAAAGTTT+TGG | + | chr1.2:83023042-83023061 | MS.gene065050:CDS | 25.0% |
| !! | GATACTAGATTTTCTTCAAT+GGG | + | chr1.2:83022854-83022873 | MS.gene065050:CDS | 25.0% |
| !!! | GAATTTGTTATCTTCTGATT+TGG | - | chr1.2:83022759-83022778 | None:intergenic | 25.0% |
| AAACTACCAAAAATAGTAGC+AGG | - | chr1.2:83023133-83023152 | None:intergenic | 30.0% | |
| ACACATAAGGACTAAAAGAA+TGG | - | chr1.2:83022681-83022700 | None:intergenic | 30.0% | |
| AGCTTTCTAAGTTAAAGAAG+AGG | + | chr1.2:83023254-83023273 | MS.gene065050:CDS | 30.0% | |
| TCAGATCCAAAAACAACATT+TGG | - | chr1.2:83023187-83023206 | None:intergenic | 30.0% | |
| TTGGAGGGAAAAATTTATTC+AGG | + | chr1.2:83023001-83023020 | MS.gene065050:CDS | 30.0% | |
| ! | TGAGATTAAAGATGAGCTTT+TGG | + | chr1.2:83023204-83023223 | MS.gene065050:CDS | 30.0% |
| !! | AGTTTTGATAGTCAAAATCC+TGG | + | chr1.2:83023148-83023167 | MS.gene065050:CDS | 30.0% |
| !! | TTTGGAATTTTCATCAAACC+AGG | - | chr1.2:83023169-83023188 | None:intergenic | 30.0% |
| !! | TTTTCTGGTATAAAACTACC+AGG | + | chr1.2:83022821-83022840 | MS.gene065050:CDS | 30.0% |
| !!! | GTTGAAGATTTCACTTTTTC+TGG | + | chr1.2:83022806-83022825 | MS.gene065050:CDS | 30.0% |
| !!! | TTTGCTAAAGTTTTGGAGAA+AGG | + | chr1.2:83023049-83023068 | MS.gene065050:CDS | 30.0% |
| CAGCAATGATGAAACACATA+AGG | - | chr1.2:83022694-83022713 | None:intergenic | 35.0% | |
| GTGAATTCAAATGTGTTTCC+AGG | + | chr1.2:83022878-83022897 | MS.gene065050:CDS | 35.0% | |
| TTTCCAGGTTTAAACACTCT+TGG | + | chr1.2:83022893-83022912 | MS.gene065050:CDS | 35.0% | |
| ! | AACAGAAGTTGCTATTGTGT+TGG | + | chr1.2:83022982-83023001 | MS.gene065050:CDS | 35.0% |
| ! | AGCTTTTGGACTTGATTCTA+AGG | + | chr1.2:83023231-83023250 | MS.gene065050:CDS | 35.0% |
| ! | GATGTTCCTGCTACTATTTT+TGG | + | chr1.2:83023124-83023143 | MS.gene065050:CDS | 35.0% |
| ! | GTGCATTTTCAGATGAATGT+TGG | + | chr1.2:83023100-83023119 | MS.gene065050:CDS | 35.0% |
| !! | CTAGTATCTTTGAAGTTTCC+TGG | - | chr1.2:83022842-83022861 | None:intergenic | 35.0% |
| !! | GAGCTTTTGGAAAAAGCTTT+TGG | + | chr1.2:83023217-83023236 | MS.gene065050:CDS | 35.0% |
| !! | GTTAGAGCAGATTTTGATGT+TGG | + | chr1.2:83022926-83022945 | MS.gene065050:CDS | 35.0% |
| !!! | TAAAGTTTTGGAGAAAGGTG+AGG | + | chr1.2:83023054-83023073 | MS.gene065050:CDS | 35.0% |
| ATAGCAACTTCTGTTGCTCT+TGG | - | chr1.2:83022977-83022996 | None:intergenic | 40.0% | |
| CAGTAATCCATAACAGGATC+CGG | - | chr1.2:83022731-83022750 | None:intergenic | 40.0% | |
| GAAATCTTCAACTGTTGCTG+TGG | - | chr1.2:83022798-83022817 | None:intergenic | 40.0% | |
| GCTATGCAGTAATCCATAAC+AGG | - | chr1.2:83022737-83022756 | None:intergenic | 40.0% | |
| TGAAAATGCACAAGTCCTCT+TGG | - | chr1.2:83023091-83023110 | None:intergenic | 40.0% | |
| TTTGGAGAAAGGTGAGGTTA+TGG | + | chr1.2:83023060-83023079 | MS.gene065050:CDS | 40.0% | |
| ! | AGAAGTTGCTATTGTGTTGG+AGG | + | chr1.2:83022985-83023004 | MS.gene065050:CDS | 40.0% |
| ! | GAAGTTGCTATTGTGTTGGA+GGG | + | chr1.2:83022986-83023005 | MS.gene065050:CDS | 40.0% |
| ! | GAGGTTATGGTTTTTCCAAG+AGG | + | chr1.2:83023073-83023092 | MS.gene065050:CDS | 40.0% |
| !! | ACTCCAAGAGTGTTTAAACC+TGG | - | chr1.2:83022899-83022918 | None:intergenic | 40.0% |
| !! | AGAGCAGATTTTGATGTTGG+TGG | + | chr1.2:83022929-83022948 | MS.gene065050:CDS | 40.0% |
| !!! | TGCTGCTTTTTGTTCTGATC+CGG | + | chr1.2:83022709-83022728 | MS.gene065050:CDS | 40.0% |
| GTTGCTCTTGGATGAAAGTG+AGG | - | chr1.2:83022965-83022984 | None:intergenic | 45.0% | |
| TTCTGATCCGGATCCTGTTA+TGG | + | chr1.2:83022721-83022740 | MS.gene065050:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 83022659 | 83023291 | 83022659 | ID=MS.gene065050 |
| chr1.2 | mRNA | 83022659 | 83023291 | 83022659 | ID=MS.gene065050.t1;Parent=MS.gene065050 |
| chr1.2 | exon | 83022659 | 83023291 | 83022659 | ID=MS.gene065050.t1.exon1;Parent=MS.gene065050.t1 |
| chr1.2 | CDS | 83022659 | 83023291 | 83022659 | ID=cds.MS.gene065050.t1;Parent=MS.gene065050.t1 |
| Gene Sequence |
| Protein sequence |
