Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06508.t1 | XP_013461534.1 | 97.7 | 349 | 1 | 1 | 1 | 342 | 1 | 349 | 5.50E-180 | 640.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06508.t1 | Q8RXL8 | 75.7 | 354 | 74 | 2 | 1 | 342 | 1 | 354 | 9.3e-144 | 511.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06508.t1 | A0A072V0L7 | 97.7 | 349 | 1 | 1 | 1 | 342 | 1 | 349 | 4.0e-180 | 640.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059337 | MS.gene06508 | 0.87751 | 5.93E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06508 | MS.gene88927 | PPI |
| MS.gene24078 | MS.gene06508 | PPI |
| MS.gene06508 | MS.gene24076 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06508.t1 | MTR_3g094260 | 97.708 | 349 | 1 | 1 | 1 | 342 | 1 | 349 | 0.0 | 686 |
| MS.gene06508.t1 | MTR_3g094270 | 82.235 | 349 | 51 | 2 | 1 | 342 | 1 | 345 | 0.0 | 562 |
| MS.gene06508.t1 | MTR_4g058860 | 63.506 | 348 | 117 | 3 | 1 | 340 | 1 | 346 | 5.85e-155 | 439 |
| MS.gene06508.t1 | MTR_2g094640 | 61.782 | 348 | 123 | 3 | 1 | 340 | 1 | 346 | 6.08e-154 | 436 |
| MS.gene06508.t1 | MTR_1g026590 | 38.305 | 295 | 173 | 1 | 13 | 298 | 14 | 308 | 1.42e-55 | 185 |
| MS.gene06508.t1 | MTR_8g092190 | 37.075 | 294 | 173 | 4 | 3 | 286 | 6 | 297 | 2.04e-53 | 179 |
| MS.gene06508.t1 | MTR_3g095130 | 34.932 | 292 | 182 | 2 | 3 | 286 | 6 | 297 | 5.26e-53 | 178 |
| MS.gene06508.t1 | MTR_5g004620 | 34.688 | 320 | 197 | 3 | 5 | 314 | 8 | 325 | 1.85e-49 | 169 |
| MS.gene06508.t1 | MTR_1g098240 | 36.655 | 281 | 170 | 2 | 14 | 286 | 17 | 297 | 9.80e-48 | 164 |
| MS.gene06508.t1 | MTR_3g095130 | 36.364 | 231 | 146 | 1 | 57 | 286 | 18 | 248 | 1.41e-47 | 162 |
| MS.gene06508.t1 | MTR_1291s0010 | 63.107 | 103 | 31 | 1 | 1 | 96 | 1 | 103 | 3.54e-36 | 127 |
| MS.gene06508.t1 | MTR_5g096310 | 27.976 | 336 | 212 | 5 | 3 | 314 | 44 | 373 | 7.33e-29 | 115 |
| MS.gene06508.t1 | MTR_2g038410 | 27.451 | 306 | 203 | 3 | 5 | 297 | 49 | 348 | 1.52e-27 | 111 |
| MS.gene06508.t1 | MTR_3g072380 | 28.279 | 244 | 170 | 3 | 77 | 318 | 93 | 333 | 4.06e-22 | 95.9 |
| MS.gene06508.t1 | MTR_1g030320 | 27.344 | 256 | 175 | 5 | 77 | 326 | 92 | 342 | 9.00e-22 | 94.7 |
| MS.gene06508.t1 | MTR_3g107470 | 24.490 | 343 | 210 | 10 | 1 | 310 | 1 | 327 | 1.39e-16 | 80.1 |
| MS.gene06508.t1 | MTR_0011s0320 | 23.692 | 325 | 215 | 10 | 22 | 324 | 25 | 338 | 3.21e-16 | 79.0 |
| MS.gene06508.t1 | MTR_4g114360 | 24.000 | 325 | 199 | 10 | 22 | 312 | 25 | 335 | 9.25e-16 | 77.8 |
| MS.gene06508.t1 | MTR_2g070400 | 26.437 | 261 | 174 | 8 | 67 | 318 | 82 | 333 | 6.06e-14 | 72.0 |
| MS.gene06508.t1 | MTR_7g110380 | 23.512 | 336 | 222 | 10 | 22 | 338 | 26 | 345 | 1.94e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06508.t1 | AT1G06890 | 75.706 | 354 | 74 | 2 | 1 | 342 | 1 | 354 | 0.0 | 522 |
| MS.gene06508.t1 | AT1G06890 | 75.706 | 354 | 74 | 2 | 1 | 342 | 1 | 354 | 0.0 | 522 |
| MS.gene06508.t1 | AT2G30460 | 76.571 | 350 | 74 | 2 | 1 | 342 | 1 | 350 | 0.0 | 521 |
| MS.gene06508.t1 | AT2G30460 | 76.571 | 350 | 74 | 2 | 1 | 342 | 1 | 350 | 0.0 | 521 |
| MS.gene06508.t1 | AT1G06890 | 77.515 | 338 | 69 | 1 | 1 | 331 | 1 | 338 | 0.0 | 511 |
| MS.gene06508.t1 | AT1G06890 | 77.515 | 338 | 69 | 1 | 1 | 331 | 1 | 338 | 0.0 | 511 |
| MS.gene06508.t1 | AT2G30460 | 75.076 | 329 | 76 | 2 | 20 | 342 | 1 | 329 | 1.37e-180 | 503 |
| MS.gene06508.t1 | AT2G30460 | 75.076 | 329 | 76 | 2 | 20 | 342 | 1 | 329 | 1.37e-180 | 503 |
| MS.gene06508.t1 | AT2G30460 | 75.076 | 329 | 76 | 2 | 20 | 342 | 1 | 329 | 1.37e-180 | 503 |
| MS.gene06508.t1 | AT2G28315 | 64.244 | 344 | 113 | 3 | 1 | 336 | 1 | 342 | 1.48e-154 | 437 |
| MS.gene06508.t1 | AT2G28315 | 70.724 | 304 | 82 | 1 | 1 | 297 | 1 | 304 | 7.08e-153 | 432 |
| MS.gene06508.t1 | AT2G30460 | 79.911 | 224 | 38 | 1 | 1 | 217 | 1 | 224 | 8.22e-114 | 334 |
| MS.gene06508.t1 | AT5G42420 | 33.731 | 335 | 209 | 3 | 2 | 324 | 3 | 336 | 8.81e-59 | 193 |
| MS.gene06508.t1 | AT1G21070 | 36.393 | 305 | 185 | 1 | 3 | 298 | 7 | 311 | 2.22e-57 | 189 |
| MS.gene06508.t1 | AT4G09810 | 36.677 | 319 | 180 | 5 | 13 | 310 | 16 | 333 | 3.15e-57 | 189 |
| MS.gene06508.t1 | AT1G76670 | 35.962 | 317 | 194 | 1 | 5 | 312 | 8 | 324 | 2.42e-56 | 187 |
| MS.gene06508.t1 | AT1G76670 | 35.962 | 317 | 194 | 1 | 5 | 312 | 8 | 324 | 2.42e-56 | 187 |
| MS.gene06508.t1 | AT1G34020 | 38.351 | 279 | 162 | 4 | 17 | 286 | 20 | 297 | 1.80e-53 | 179 |
| MS.gene06508.t1 | AT1G34020 | 38.351 | 279 | 162 | 4 | 17 | 286 | 20 | 297 | 1.80e-53 | 179 |
| MS.gene06508.t1 | AT1G34020 | 38.351 | 279 | 162 | 4 | 17 | 286 | 20 | 297 | 1.80e-53 | 179 |
| MS.gene06508.t1 | AT4G09810 | 38.340 | 253 | 143 | 2 | 71 | 310 | 24 | 276 | 2.85e-52 | 174 |
| MS.gene06508.t1 | AT4G39390 | 36.462 | 277 | 168 | 2 | 18 | 286 | 22 | 298 | 3.72e-52 | 176 |
| MS.gene06508.t1 | AT4G39390 | 36.331 | 278 | 169 | 2 | 17 | 286 | 25 | 302 | 4.99e-52 | 175 |
| MS.gene06508.t1 | AT4G39390 | 36.331 | 278 | 169 | 2 | 17 | 286 | 25 | 302 | 4.99e-52 | 175 |
| MS.gene06508.t1 | AT4G09810 | 38.756 | 209 | 119 | 3 | 13 | 213 | 16 | 223 | 3.21e-36 | 131 |
| MS.gene06508.t1 | AT5G55950 | 30.976 | 297 | 185 | 5 | 5 | 288 | 52 | 341 | 1.24e-33 | 128 |
| MS.gene06508.t1 | AT5G55950 | 30.314 | 287 | 181 | 4 | 15 | 288 | 1 | 281 | 5.11e-32 | 122 |
| MS.gene06508.t1 | AT5G55950 | 32.000 | 250 | 164 | 3 | 39 | 288 | 20 | 263 | 1.10e-31 | 121 |
| MS.gene06508.t1 | AT5G42420 | 28.523 | 298 | 150 | 7 | 2 | 295 | 3 | 241 | 1.04e-30 | 118 |
| MS.gene06508.t1 | AT5G57100 | 29.010 | 293 | 193 | 3 | 10 | 291 | 63 | 351 | 1.08e-30 | 120 |
| MS.gene06508.t1 | AT5G57100 | 28.279 | 244 | 166 | 2 | 91 | 334 | 40 | 274 | 1.12e-23 | 99.0 |
| MS.gene06508.t1 | AT5G55950 | 30.120 | 249 | 154 | 5 | 3 | 238 | 50 | 291 | 2.26e-23 | 99.0 |
| MS.gene06508.t1 | AT5G57100 | 27.917 | 240 | 158 | 3 | 10 | 238 | 63 | 298 | 3.40e-21 | 92.4 |
| MS.gene06508.t1 | AT1G77610 | 27.309 | 249 | 173 | 3 | 77 | 321 | 87 | 331 | 3.71e-19 | 87.4 |
| MS.gene06508.t1 | AT1G21870 | 26.829 | 246 | 172 | 4 | 77 | 318 | 93 | 334 | 5.63e-18 | 84.0 |
| MS.gene06508.t1 | AT2G25520 | 25.352 | 355 | 208 | 12 | 1 | 313 | 1 | 340 | 7.10e-17 | 80.9 |
| MS.gene06508.t1 | AT5G57100 | 30.814 | 172 | 108 | 2 | 10 | 170 | 63 | 234 | 7.55e-17 | 79.7 |
| MS.gene06508.t1 | AT5G25400 | 22.857 | 350 | 236 | 9 | 1 | 325 | 1 | 341 | 6.84e-16 | 78.2 |
| MS.gene06508.t1 | AT5G11230 | 23.276 | 348 | 219 | 9 | 9 | 314 | 1 | 342 | 2.24e-15 | 76.6 |
| MS.gene06508.t1 | AT4G32390 | 23.714 | 350 | 233 | 11 | 1 | 325 | 1 | 341 | 4.46e-15 | 75.9 |
Find 69 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAGTACATTTCTTGTTAT+TGG | 0.090811 | 3.2:-79017794 | MS.gene06508:CDS |
| ATCTGATCCTTTCATTAGTA+TGG | 0.192587 | 3.2:-79017438 | MS.gene06508:CDS |
| TTAACCGACCAAAATGTATT+TGG | 0.205055 | 3.2:-79017977 | MS.gene06508:CDS |
| TGAATTTCTTCCCGAGAAAA+AGG | 0.209450 | 3.2:+79019063 | None:intergenic |
| CAGAAAGCCGTAGTTGGATT+TGG | 0.240775 | 3.2:-79019287 | MS.gene06508:CDS |
| GGGATCTTTCTTATCTCTTC+TGG | 0.246449 | 3.2:-79018616 | MS.gene06508:CDS |
| ACTTGAAACCAAATACATTT+TGG | 0.258828 | 3.2:+79017969 | None:intergenic |
| AAGAAACCTTGTACTTCTTC+TGG | 0.267156 | 3.2:+79018077 | None:intergenic |
| CCAGTCACTTATCAGGTTCT+TGG | 0.270456 | 3.2:-79017761 | MS.gene06508:CDS |
| AACAGGGTTGCTGCTTGATA+TGG | 0.291943 | 3.2:+79018028 | None:intergenic |
| GTTAATCTCTGGTCCATATC+TGG | 0.296236 | 3.2:-79018008 | MS.gene06508:CDS |
| CCTTTCATTAGTATGGAAAA+AGG | 0.297104 | 3.2:-79017431 | MS.gene06508:CDS |
| GATATGGACCAGAGATTAAC+AGG | 0.298493 | 3.2:+79018011 | None:intergenic |
| ACATGCCTTGTATTGGCATT+TGG | 0.350342 | 3.2:-79017728 | MS.gene06508:CDS |
| TTCTCCAGCTGAATGGGTCT+TGG | 0.351507 | 3.2:+79017693 | None:intergenic |
| AGAAAGCCGTAGTTGGATTT+GGG | 0.351984 | 3.2:-79019286 | MS.gene06508:CDS |
| CCAATACAAGGCATGTCTTC+AGG | 0.361826 | 3.2:+79017735 | None:intergenic |
| GACATCTCCAGTCACTTATC+AGG | 0.378688 | 3.2:-79017768 | MS.gene06508:CDS |
| GTTAAAAGTTTATCCAGATA+TGG | 0.383577 | 3.2:+79017995 | None:intergenic |
| ATTCAGCTGGAGAAACATAA+TGG | 0.385481 | 3.2:-79017684 | MS.gene06508:CDS |
| CACCCATGAGGAGGATAGAT+AGG | 0.391612 | 3.2:+79018679 | None:intergenic |
| TTATGTTTCTCCAGCTGAAT+GGG | 0.399962 | 3.2:+79017687 | None:intergenic |
| TCTTTGTCTTTGTTCCAGAC+AGG | 0.403719 | 3.2:+79017371 | None:intergenic |
| AGATTTGCAGTTGAATGCTC+TGG | 0.404522 | 3.2:-79018637 | MS.gene06508:CDS |
| TTCCCTATCTATCCTCCTCA+TGG | 0.422013 | 3.2:-79018682 | MS.gene06508:CDS |
| ATTATGTTTCTCCAGCTGAA+TGG | 0.435593 | 3.2:+79017686 | None:intergenic |
| AGCCTAGGGTTCAATTCTGT+CGG | 0.444368 | 3.2:-79019227 | MS.gene06508:CDS |
| AGCTGTTGAAGCCGCGGCAC+AGG | 0.450223 | 3.2:-79017594 | MS.gene06508:CDS |
| GACATGATTGATATAGAAGC+TGG | 0.450805 | 3.2:+79018050 | None:intergenic |
| CTTTGTCTTTGTTCCAGACA+GGG | 0.460471 | 3.2:+79017372 | None:intergenic |
| CCTGAAGACATGCCTTGTAT+TGG | 0.463142 | 3.2:-79017735 | MS.gene06508:CDS |
| TTTGAGCAGAAAGCCGTAGT+TGG | 0.477606 | 3.2:-79019293 | MS.gene06508:CDS |
| TGGGACATAAGTCCCCTGTC+TGG | 0.481095 | 3.2:-79017385 | MS.gene06508:CDS |
| TCTATCCTCCTCATGGGTGT+TGG | 0.481095 | 3.2:-79018675 | MS.gene06508:CDS |
| TTCAGCTGGAGAAACATAAT+GGG | 0.488898 | 3.2:-79017683 | MS.gene06508:CDS |
| AGCCGCGGCACAGGCATCCC+AGG | 0.490553 | 3.2:-79017585 | MS.gene06508:intron |
| TGCTCCAAGACCCATTCAGC+TGG | 0.496804 | 3.2:-79017697 | MS.gene06508:CDS |
| CATTCCATGTACTGTACTGT+TGG | 0.507133 | 3.2:-79019090 | MS.gene06508:CDS |
| TCCCTATCTATCCTCCTCAT+GGG | 0.517975 | 3.2:-79018681 | MS.gene06508:CDS |
| GCAGCAACCCTGTTAATCTC+TGG | 0.529946 | 3.2:-79018019 | MS.gene06508:CDS |
| TAAAATCCCAAATCCAACTA+CGG | 0.535809 | 3.2:+79019280 | None:intergenic |
| GACAGAAATTGAGATGAGGC+AGG | 0.537485 | 3.2:+79017820 | None:intergenic |
| GATTTGCAGTTGAATGCTCT+GGG | 0.539099 | 3.2:-79018636 | MS.gene06508:CDS |
| CAGCTACAACTCTGACAAGC+TGG | 0.546757 | 3.2:-79019382 | MS.gene06508:CDS |
| TTTGTCTTTGTTCCAGACAG+GGG | 0.559552 | 3.2:+79017373 | None:intergenic |
| ACAGGGGACTTATGTCCCAC+AGG | 0.562073 | 3.2:+79017389 | None:intergenic |
| AATGAGATTCTTCGAGCACA+AGG | 0.570074 | 3.2:-79019318 | MS.gene06508:CDS |
| CCAAGAACCTGATAAGTGAC+TGG | 0.571372 | 3.2:+79017761 | None:intergenic |
| CACTATCCAGAAGAAGTACA+AGG | 0.572849 | 3.2:-79018083 | MS.gene06508:CDS |
| TATAACCAAATGCCAATACA+AGG | 0.574384 | 3.2:+79017723 | None:intergenic |
| GTCTCCAACAGTACAGTACA+TGG | 0.575499 | 3.2:+79019086 | None:intergenic |
| GGGAGCTTTATCTCTTTCTG+TGG | 0.578502 | 3.2:-79020332 | MS.gene06508:CDS |
| AAATCTTTCCAGGCAAGAGA+AGG | 0.583785 | 3.2:-79017464 | MS.gene06508:intron |
| ACCCATGAGGAGGATAGATA+GGG | 0.590497 | 3.2:+79018680 | None:intergenic |
| ATCTTTCTTATCTCTTCTGG+CGG | 0.601235 | 3.2:-79018613 | MS.gene06508:CDS |
| AATTGAGCAAAGATGGGTGA+AGG | 0.609841 | 3.2:-79020379 | None:intergenic |
| TGCTTTGTTGCAAATAACAA+TGG | 0.610561 | 3.2:+79020297 | None:intergenic |
| CAAGTACACAACACAAGTGA+CGG | 0.616273 | 3.2:-79017951 | MS.gene06508:intron |
| AGCCGACAGAATTGAACCCT+AGG | 0.639934 | 3.2:+79019225 | None:intergenic |
| CGATGCTGTGATTGACCCTG+TGG | 0.642015 | 3.2:-79017405 | MS.gene06508:CDS |
| CAATTCCAACACCCATGAGG+AGG | 0.643900 | 3.2:+79018670 | None:intergenic |
| ACATGATTGATATAGAAGCT+GGG | 0.643948 | 3.2:+79018051 | None:intergenic |
| AACCTGGGATGCCTGTGCCG+CGG | 0.646370 | 3.2:+79017583 | None:intergenic |
| ATATAGAATCATCCCAACCA+TGG | 0.647960 | 3.2:+79017649 | None:intergenic |
| CAGGGGACTTATGTCCCACA+GGG | 0.661489 | 3.2:+79017390 | None:intergenic |
| AATTGACAGAAATTGAGATG+AGG | 0.667892 | 3.2:+79017816 | None:intergenic |
| TTGCAATTCCAACACCCATG+AGG | 0.723808 | 3.2:+79018667 | None:intergenic |
| ATATGGACCAGAGATTAACA+GGG | 0.762761 | 3.2:+79018012 | None:intergenic |
| GATGCTGTGATTGACCCTGT+GGG | 0.771297 | 3.2:-79017404 | MS.gene06508:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATACTTAAATATCTTAA+CGG | - | chr3.2:79018745-79018764 | MS.gene06508:intron | 10.0% |
| !! | ATAAATTACCAAAAATGAAA+TGG | + | chr3.2:79017477-79017496 | None:intergenic | 15.0% |
| !! | ATTAATGGAAAAACTATTAA+AGG | + | chr3.2:79018969-79018988 | None:intergenic | 15.0% |
| !! | TACTTAAATAAACATCTTAA+CGG | - | chr3.2:79018778-79018797 | MS.gene06508:intron | 15.0% |
| !! | TGTTTACAAATTAACATTAA+TGG | + | chr3.2:79018984-79019003 | None:intergenic | 15.0% |
| !!! | GAATTTTACAATTTATCATT+TGG | - | chr3.2:79017814-79017833 | MS.gene06508:CDS | 15.0% |
| !! | ACAATAATATTTACTTCCAA+AGG | + | chr3.2:79018007-79018026 | None:intergenic | 20.0% |
| !! | ACTAAAACAAAAAACATACT+TGG | + | chr3.2:79018539-79018558 | None:intergenic | 20.0% |
| !! | ATAAAAATCATAGTATGGAA+AGG | + | chr3.2:79018712-79018731 | None:intergenic | 20.0% |
| !! | ATTGAAGCTAATAGAATAAA+AGG | + | chr3.2:79017556-79017575 | None:intergenic | 20.0% |
| !! | CAAAAATTATCTCATAGTAT+TGG | + | chr3.2:79019208-79019227 | None:intergenic | 20.0% |
| !! | CAATAACGTTATTATTTATG+AGG | + | chr3.2:79018111-79018130 | None:intergenic | 20.0% |
| !! | CAATAATATTTACTTCCAAA+GGG | + | chr3.2:79018006-79018025 | None:intergenic | 20.0% |
| !! | CTTGAAATGTTTACAAAAAA+TGG | - | chr3.2:79019548-79019567 | MS.gene06508:intron | 20.0% |
| !! | TTGAAGCTAATAGAATAAAA+GGG | + | chr3.2:79017555-79017574 | None:intergenic | 20.0% |
| !!! | AACATTTAATTTGAAAAGGA+AGG | + | chr3.2:79017895-79017914 | None:intergenic | 20.0% |
| !!! | ATATGGATTAATCAATTTGT+TGG | - | chr3.2:79017865-79017884 | MS.gene06508:intron | 20.0% |
| !!! | ATTTTTTTCTGTGGAAATTT+TGG | - | chr3.2:79017637-79017656 | MS.gene06508:CDS | 20.0% |
| !!! | GGTGAAACTAATTATTTTTA+AGG | + | chr3.2:79019177-79019196 | None:intergenic | 20.0% |
| !!! | TAAACATTTCAAGTACAATA+AGG | + | chr3.2:79019541-79019560 | None:intergenic | 20.0% |
| !!! | TTCCTTTTCAAATTAAATGT+TGG | - | chr3.2:79017894-79017913 | MS.gene06508:intron | 20.0% |
| !!! | TTCTGTTATATTTTTTTCTG+TGG | - | chr3.2:79017628-79017647 | MS.gene06508:CDS | 20.0% |
| !!! | TTTAGTACATTTCTTGTTAT+TGG | - | chr3.2:79019940-79019959 | MS.gene06508:intron | 20.0% |
| ! | AAAAACTAAAAGAAAGTCTG+TGG | + | chr3.2:79019846-79019865 | None:intergenic | 25.0% |
| ! | AAATTTATTGCCTCCTAAAT+GGG | - | chr3.2:79018220-79018239 | MS.gene06508:intron | 25.0% |
| ! | AATAAATTTACCTACTTCAC+GGG | + | chr3.2:79018209-79018228 | None:intergenic | 25.0% |
| ! | ACAAATCCAATTAATAGTTC+TGG | + | chr3.2:79017793-79017812 | None:intergenic | 25.0% |
| ! | ACAATAATCTATACTTCCAA+AGG | + | chr3.2:79017921-79017940 | None:intergenic | 25.0% |
| ! | ATATAGTCTGCTAACTATAT+AGG | - | chr3.2:79019322-79019341 | MS.gene06508:CDS | 25.0% |
| ! | ATCATCAAAAAACATCTTAC+TGG | + | chr3.2:79019304-79019323 | None:intergenic | 25.0% |
| ! | CAATAAATTTACCTACTTCA+CGG | + | chr3.2:79018210-79018229 | None:intergenic | 25.0% |
| ! | CAATAATCTATACTTCCAAA+GGG | + | chr3.2:79017920-79017939 | None:intergenic | 25.0% |
| ! | CAGACATAAAAATCATAGTA+TGG | + | chr3.2:79018717-79018736 | None:intergenic | 25.0% |
| ! | GAATTAGTGATCAATGTTAA+GGG | + | chr3.2:79018165-79018184 | None:intergenic | 25.0% |
| ! | GCAACAAATCATACAAAAAA+AGG | + | chr3.2:79017583-79017602 | None:intergenic | 25.0% |
| ! | GGAATAGAACTATATATTAC+AGG | - | chr3.2:79019236-79019255 | MS.gene06508:CDS | 25.0% |
| ! | GTATAACCAGAACTATTAAT+TGG | - | chr3.2:79017784-79017803 | MS.gene06508:CDS | 25.0% |
| ! | GTTAAAAGTTTATCCAGATA+TGG | + | chr3.2:79019742-79019761 | None:intergenic | 25.0% |
| ! | TAAATTTATTGCCTCCTAAA+TGG | - | chr3.2:79018219-79018238 | MS.gene06508:intron | 25.0% |
| ! | TATAGTCTGCTAACTATATA+GGG | - | chr3.2:79019323-79019342 | MS.gene06508:CDS | 25.0% |
| ! | TGAATTAGTGATCAATGTTA+AGG | + | chr3.2:79018166-79018185 | None:intergenic | 25.0% |
| ! | TTATTGTCATATTCGTTAAC+AGG | - | chr3.2:79017977-79017996 | MS.gene06508:CDS | 25.0% |
| ! | TTGTGTTCAAATGACATAAA+TGG | + | chr3.2:79019501-79019520 | None:intergenic | 25.0% |
| !! | ACTTGAAACCAAATACATTT+TGG | + | chr3.2:79019768-79019787 | None:intergenic | 25.0% |
| !! | ATTTTAAACGGAATCTCAAT+TGG | - | chr3.2:79018471-79018490 | MS.gene06508:intron | 25.0% |
| !! | GAGATAATTTTTGTGATAGA+TGG | - | chr3.2:79019215-79019234 | MS.gene06508:intron | 25.0% |
| !! | TATGTCATTTGAACACAATT+AGG | - | chr3.2:79019503-79019522 | MS.gene06508:intron | 25.0% |
| !!! | AAACATAATGGGTATTTTGT+TGG | - | chr3.2:79020062-79020081 | MS.gene06508:intron | 25.0% |
| !!! | CAATTTTAATTTGTAATCCC+AGG | + | chr3.2:79018321-79018340 | None:intergenic | 25.0% |
| !!! | TATCATTTGGCTTTATGTTT+TGG | - | chr3.2:79017827-79017846 | MS.gene06508:CDS | 25.0% |
| !!! | TTGTTTTTTTTTTGCTTTGC+AGG | - | chr3.2:79019876-79019895 | MS.gene06508:intron | 25.0% |
| !!! | TTTTTTTATCACGTGTTGAT+TGG | - | chr3.2:79018564-79018583 | MS.gene06508:intron | 25.0% |
| AAAGTTACGTTATACTTGCT+TGG | - | chr3.2:79017664-79017683 | MS.gene06508:CDS | 30.0% | |
| AAGAAAGTCTGTGGAAAAAA+AGG | + | chr3.2:79019837-79019856 | None:intergenic | 30.0% | |
| AATTGACAGAAATTGAGATG+AGG | + | chr3.2:79019921-79019940 | None:intergenic | 30.0% | |
| ACATGATTGATATAGAAGCT+GGG | + | chr3.2:79019686-79019705 | None:intergenic | 30.0% | |
| ATCTGATCCTTTCATTAGTA+TGG | - | chr3.2:79020296-79020315 | MS.gene06508:CDS | 30.0% | |
| ATGTTAAGGGATTAATGTTC+AGG | + | chr3.2:79018152-79018171 | None:intergenic | 30.0% | |
| CCTTTCATTAGTATGGAAAA+AGG | - | chr3.2:79020303-79020322 | MS.gene06508:CDS | 30.0% | |
| CTAATTCATTTGCCAATTTC+TGG | - | chr3.2:79018178-79018197 | MS.gene06508:intron | 30.0% | |
| CTTTGCATTATCATTTACCA+CGG | - | chr3.2:79020221-79020240 | MS.gene06508:intron | 30.0% | |
| GCAATGCACTGAATATAAAA+GGG | + | chr3.2:79018299-79018318 | None:intergenic | 30.0% | |
| GTAGTCTCTAGATAAAGAAA+TGG | + | chr3.2:79019479-79019498 | None:intergenic | 30.0% | |
| TAAAATCCCAAATCCAACTA+CGG | + | chr3.2:79018457-79018476 | None:intergenic | 30.0% | |
| TAGTGTTTGTCATCTGAAAA+CGG | + | chr3.2:79019636-79019655 | None:intergenic | 30.0% | |
| TATAACCAAATGCCAATACA+AGG | + | chr3.2:79020014-79020033 | None:intergenic | 30.0% | |
| TTAACCGACCAAAATGTATT+TGG | - | chr3.2:79019757-79019776 | MS.gene06508:intron | 30.0% | |
| TTTGCATTATCATTTACCAC+GGG | - | chr3.2:79020222-79020241 | MS.gene06508:intron | 30.0% | |
| ! | AGTTCACTCCATTTCATTTT+TGG | - | chr3.2:79017466-79017485 | MS.gene06508:intron | 30.0% |
| ! | CCTTTTTCCATACTAATGAA+AGG | + | chr3.2:79020306-79020325 | None:intergenic | 30.0% |
| ! | GACTTTTAAATTTGAGCCTA+GGG | - | chr3.2:79018493-79018512 | MS.gene06508:intron | 30.0% |
| ! | GGTTGACTGATAATTTTTCA+TGG | - | chr3.2:79019569-79019588 | MS.gene06508:intron | 30.0% |
| ! | TATCAACCTACCTATTTTGT+CGG | - | chr3.2:79018828-79018847 | MS.gene06508:intron | 30.0% |
| ! | TGCTTTGTTGCAAATAACAA+TGG | + | chr3.2:79017440-79017459 | None:intergenic | 30.0% |
| !! | CTCATAGTATTGGTACATAT+AGG | + | chr3.2:79019198-79019217 | None:intergenic | 30.0% |
| !! | GAAACCAAATACATTTTGGT+CGG | + | chr3.2:79019764-79019783 | None:intergenic | 30.0% |
| !! | GGAATGTTGTTTCATAGATA+TGG | - | chr3.2:79017848-79017867 | MS.gene06508:intron | 30.0% |
| !! | GGCCAACATTTAATTTGAAA+AGG | + | chr3.2:79017899-79017918 | None:intergenic | 30.0% |
| !! | GTTGGATTTGGGATTTTAAA+CGG | - | chr3.2:79018459-79018478 | MS.gene06508:intron | 30.0% |
| !!! | CATTGTTTTGACCTGAATTA+TGG | - | chr3.2:79018893-79018912 | MS.gene06508:intron | 30.0% |
| AAGAAACCTTGTACTTCTTC+TGG | + | chr3.2:79019660-79019679 | None:intergenic | 35.0% | |
| ATATAGAATCATCCCAACCA+TGG | + | chr3.2:79020088-79020107 | None:intergenic | 35.0% | |
| ATATGGACCAGAGATTAACA+GGG | + | chr3.2:79019725-79019744 | None:intergenic | 35.0% | |
| ATCTTTCTTATCTCTTCTGG+CGG | - | chr3.2:79019121-79019140 | MS.gene06508:intron | 35.0% | |
| ATTATGTTTCTCCAGCTGAA+TGG | + | chr3.2:79020051-79020070 | None:intergenic | 35.0% | |
| ATTCAGCTGGAGAAACATAA+TGG | - | chr3.2:79020050-79020069 | MS.gene06508:intron | 35.0% | |
| CAAATTAAATGTTGGCCCTT+TGG | - | chr3.2:79017902-79017921 | MS.gene06508:intron | 35.0% | |
| CATCATGAATTTGCCTTTCA+AGG | - | chr3.2:79019353-79019372 | MS.gene06508:CDS | 35.0% | |
| CATCTGAAAACGGCTAATTA+AGG | + | chr3.2:79019626-79019645 | None:intergenic | 35.0% | |
| GAATTTCTTCCCGAGAAAAA+GGG | + | chr3.2:79018673-79018692 | None:intergenic | 35.0% | |
| GACATGATTGATATAGAAGC+TGG | + | chr3.2:79019687-79019706 | None:intergenic | 35.0% | |
| GGCAATGCACTGAATATAAA+AGG | + | chr3.2:79018300-79018319 | None:intergenic | 35.0% | |
| GTGTCAATTAACCCTAGATT+CGG | + | chr3.2:79018048-79018067 | None:intergenic | 35.0% | |
| TGAATTTCTTCCCGAGAAAA+AGG | + | chr3.2:79018674-79018693 | None:intergenic | 35.0% | |
| TGCACTGAATATAAAAGGGA+AGG | + | chr3.2:79018295-79018314 | None:intergenic | 35.0% | |
| TGTTTCCTCTAAATCTTTCC+AGG | - | chr3.2:79020260-79020279 | MS.gene06508:intron | 35.0% | |
| TTATATTCAGTGCATTGCCT+GGG | - | chr3.2:79018301-79018320 | MS.gene06508:intron | 35.0% | |
| TTATGTTTCTCCAGCTGAAT+GGG | + | chr3.2:79020050-79020069 | None:intergenic | 35.0% | |
| TTCAGCTGGAGAAACATAAT+GGG | - | chr3.2:79020051-79020070 | MS.gene06508:intron | 35.0% | |
| TTGTCATATTCGTTAACAGG+TGG | - | chr3.2:79017980-79017999 | MS.gene06508:CDS | 35.0% | |
| TTTATATTCAGTGCATTGCC+TGG | - | chr3.2:79018300-79018319 | MS.gene06508:intron | 35.0% | |
| ! | ATTAACCCTAGATTCGGTAA+CGG | + | chr3.2:79018042-79018061 | None:intergenic | 35.0% |
| ! | CACATTTTGTTCCCTTCATT+TGG | - | chr3.2:79018386-79018405 | MS.gene06508:intron | 35.0% |
| ! | GGACTTTTAAATTTGAGCCT+AGG | - | chr3.2:79018492-79018511 | MS.gene06508:intron | 35.0% |
| ! | TTTTTCTCGGGAAGAAATTC+AGG | - | chr3.2:79018673-79018692 | MS.gene06508:CDS | 35.0% |
| !! | CATTTTGAGTGCCAAATGAA+GGG | + | chr3.2:79018400-79018419 | None:intergenic | 35.0% |
| !! | TCATTTTGAGTGCCAAATGA+AGG | + | chr3.2:79018401-79018420 | None:intergenic | 35.0% |
| AAATCTTTCCAGGCAAGAGA+AGG | - | chr3.2:79020270-79020289 | MS.gene06508:intron | 40.0% | |
| AATGAGATTCTTCGAGCACA+AGG | - | chr3.2:79018416-79018435 | MS.gene06508:intron | 40.0% | |
| AATTTACCTACTTCACGGGT+AGG | + | chr3.2:79018205-79018224 | None:intergenic | 40.0% | |
| ACATCTTACTGGCGAAGAAA+TGG | + | chr3.2:79019293-79019312 | None:intergenic | 40.0% | |
| ACCACCATATACACCCATTT+AGG | + | chr3.2:79018236-79018255 | None:intergenic | 40.0% | |
| ACCATATACACCCATTTAGG+AGG | + | chr3.2:79018233-79018252 | None:intergenic | 40.0% | |
| AGAAAGCCGTAGTTGGATTT+GGG | - | chr3.2:79018448-79018467 | MS.gene06508:intron | 40.0% | |
| AGATTTGCAGTTGAATGCTC+TGG | - | chr3.2:79019097-79019116 | MS.gene06508:CDS | 40.0% | |
| ATCAGTGAGTAAAACCAACC+TGG | + | chr3.2:79020170-79020189 | None:intergenic | 40.0% | |
| CAAGTACACAACACAAGTGA+CGG | - | chr3.2:79019783-79019802 | MS.gene06508:intron | 40.0% | |
| CATTCCATGTACTGTACTGT+TGG | - | chr3.2:79018644-79018663 | MS.gene06508:CDS | 40.0% | |
| CTTTGTCTTTGTTCCAGACA+GGG | + | chr3.2:79020365-79020384 | None:intergenic | 40.0% | |
| GAAAAGCAAGCCGACAAAAT+AGG | + | chr3.2:79018841-79018860 | None:intergenic | 40.0% | |
| GATATGGACCAGAGATTAAC+AGG | + | chr3.2:79019726-79019745 | None:intergenic | 40.0% | |
| GATTTGCAGTTGAATGCTCT+GGG | - | chr3.2:79019098-79019117 | MS.gene06508:CDS | 40.0% | |
| GCAGTCTGCAATTGAGTAAT+TGG | - | chr3.2:79018069-79018088 | MS.gene06508:CDS | 40.0% | |
| GGGATCTTTCTTATCTCTTC+TGG | - | chr3.2:79019118-79019137 | MS.gene06508:intron | 40.0% | |
| GTTAATCTCTGGTCCATATC+TGG | - | chr3.2:79019726-79019745 | MS.gene06508:intron | 40.0% | |
| TAAATGGGTGTATATGGTGG+TGG | - | chr3.2:79018235-79018254 | MS.gene06508:intron | 40.0% | |
| TATTAAAGGCAGCAACGCTT+AGG | + | chr3.2:79018955-79018974 | None:intergenic | 40.0% | |
| TCAGTGAGTAAAACCAACCT+GGG | + | chr3.2:79020169-79020188 | None:intergenic | 40.0% | |
| TCCTAAATGGGTGTATATGG+TGG | - | chr3.2:79018232-79018251 | MS.gene06508:intron | 40.0% | |
| TCTTGCCTGGAAAGATTTAG+AGG | + | chr3.2:79020268-79020287 | None:intergenic | 40.0% | |
| TCTTTGTCTTTGTTCCAGAC+AGG | + | chr3.2:79020366-79020385 | None:intergenic | 40.0% | |
| TGCCTTTCAAGGTACATGAA+AGG | - | chr3.2:79019364-79019383 | MS.gene06508:CDS | 40.0% | |
| TGCCTTTCATGTACCTTGAA+AGG | + | chr3.2:79019369-79019388 | None:intergenic | 40.0% | |
| TTGTCGTATTCGTTAACCTG+TGG | - | chr3.2:79017937-79017956 | MS.gene06508:intron | 40.0% | |
| TTTCAAGGTACATGAAAGGC+AGG | - | chr3.2:79019368-79019387 | MS.gene06508:CDS | 40.0% | |
| TTTGTCTTTGTTCCAGACAG+GGG | + | chr3.2:79020364-79020383 | None:intergenic | 40.0% | |
| ! | AATGGGTATTTTGTTGGCCA+TGG | - | chr3.2:79020068-79020087 | MS.gene06508:intron | 40.0% |
| ! | ACATGCCTTGTATTGGCATT+TGG | - | chr3.2:79020006-79020025 | MS.gene06508:intron | 40.0% |
| ! | CACTATCCAGAAGAAGTACA+AGG | - | chr3.2:79019651-79019670 | MS.gene06508:intron | 40.0% |
| ! | GCTAACGGATACCATAATTC+AGG | + | chr3.2:79018907-79018926 | None:intergenic | 40.0% |
| ! | GTATTTTGTTGGCCATGGTT+GGG | - | chr3.2:79020073-79020092 | MS.gene06508:intron | 40.0% |
| ! | TGATTGCAAGCTTTGTCATC+TGG | + | chr3.2:79018626-79018645 | None:intergenic | 40.0% |
| AAGGTACATGAAAGGCAGGA+AGG | - | chr3.2:79019372-79019391 | MS.gene06508:CDS | 45.0% | |
| ACCCATGAGGAGGATAGATA+GGG | + | chr3.2:79019057-79019076 | None:intergenic | 45.0% | |
| AGCAAGCCGACAAAATAGGT+AGG | + | chr3.2:79018837-79018856 | None:intergenic | 45.0% | |
| AGCCTAGGGTTCAATTCTGT+CGG | - | chr3.2:79018507-79018526 | MS.gene06508:intron | 45.0% | |
| AGGTACATGAAAGGCAGGAA+GGG | - | chr3.2:79019373-79019392 | MS.gene06508:CDS | 45.0% | |
| CAGAAAGCCGTAGTTGGATT+TGG | - | chr3.2:79018447-79018466 | MS.gene06508:intron | 45.0% | |
| CAGGTCAAAACAATGAGCCA+GGG | + | chr3.2:79018888-79018907 | None:intergenic | 45.0% | |
| CCAAGAACCTGATAAGTGAC+TGG | + | chr3.2:79019976-79019995 | None:intergenic | 45.0% | |
| CCAATACAAGGCATGTCTTC+AGG | + | chr3.2:79020002-79020021 | None:intergenic | 45.0% | |
| CCAGTCACTTATCAGGTTCT+TGG | - | chr3.2:79019973-79019992 | MS.gene06508:intron | 45.0% | |
| CCTGAAGACATGCCTTGTAT+TGG | - | chr3.2:79019999-79020018 | MS.gene06508:intron | 45.0% | |
| CGGGTTAAAAAGAGGGGTAA+GGG | + | chr3.2:79019415-79019434 | None:intergenic | 45.0% | |
| GAAATGGTGCACAGAGAAAC+AGG | + | chr3.2:79019277-79019296 | None:intergenic | 45.0% | |
| GACAGAAATTGAGATGAGGC+AGG | + | chr3.2:79019917-79019936 | None:intergenic | 45.0% | |
| GACATCTCCAGTCACTTATC+AGG | - | chr3.2:79019966-79019985 | MS.gene06508:intron | 45.0% | |
| GCCTCCTAAATGGGTGTATA+TGG | - | chr3.2:79018229-79018248 | MS.gene06508:intron | 45.0% | |
| GGTTCAACAGAAACACGAGA+AGG | - | chr3.2:79017685-79017704 | MS.gene06508:CDS | 45.0% | |
| GTCTCCAACAGTACAGTACA+TGG | + | chr3.2:79018651-79018670 | None:intergenic | 45.0% | |
| GTTAGCCGTTACCGAATCTA+GGG | - | chr3.2:79018034-79018053 | MS.gene06508:CDS | 45.0% | |
| GTTATACTACGCGCCTGATA+AGG | + | chr3.2:79017771-79017790 | None:intergenic | 45.0% | |
| TAAAAACGAGCACGAGTGGA+TGG | + | chr3.2:79018929-79018948 | None:intergenic | 45.0% | |
| TCAAAACAATGAGCCAGGGA+GGG | + | chr3.2:79018884-79018903 | None:intergenic | 45.0% | |
| TCAACAGAAACACGAGAAGG+TGG | - | chr3.2:79017688-79017707 | MS.gene06508:CDS | 45.0% | |
| TCAGGTCAAAACAATGAGCC+AGG | + | chr3.2:79018889-79018908 | None:intergenic | 45.0% | |
| TCCCTATCTATCCTCCTCAT+GGG | - | chr3.2:79019053-79019072 | MS.gene06508:intron | 45.0% | |
| TCTCTTGTGCTCACTCTGAT+TGG | - | chr3.2:79019440-79019459 | MS.gene06508:intron | 45.0% | |
| TTCCCTATCTATCCTCCTCA+TGG | - | chr3.2:79019052-79019071 | MS.gene06508:intron | 45.0% | |
| TTGCAATTCCAACACCCATG+AGG | + | chr3.2:79019070-79019089 | None:intergenic | 45.0% | |
| TTTGAGCAGAAAGCCGTAGT+TGG | - | chr3.2:79018441-79018460 | MS.gene06508:intron | 45.0% | |
| ! | AACAGGGTTGCTGCTTGATA+TGG | + | chr3.2:79019709-79019728 | None:intergenic | 45.0% |
| ! | AGAGCTTGCGGGTTAAAAAG+AGG | + | chr3.2:79019423-79019442 | None:intergenic | 45.0% |
| ! | AGCTTGCGGGTTAAAAAGAG+GGG | + | chr3.2:79019421-79019440 | None:intergenic | 45.0% |
| ! | CTGTTGGAGACCCTTTTTCT+CGG | - | chr3.2:79018660-79018679 | MS.gene06508:CDS | 45.0% |
| ! | GAAGGTGAACGTTTTCAGCT+GGG | - | chr3.2:79017373-79017392 | MS.gene06508:CDS | 45.0% |
| ! | GAGCTTGCGGGTTAAAAAGA+GGG | + | chr3.2:79019422-79019441 | None:intergenic | 45.0% |
| ! | GGGAGCTTTATCTCTTTCTG+TGG | - | chr3.2:79017402-79017421 | MS.gene06508:CDS | 45.0% |
| ! | GGTATTTTGTTGGCCATGGT+TGG | - | chr3.2:79020072-79020091 | MS.gene06508:intron | 45.0% |
| ! | TGAAGGTGAACGTTTTCAGC+TGG | - | chr3.2:79017372-79017391 | MS.gene06508:CDS | 45.0% |
| ! | TGTTGGAGACCCTTTTTCTC+GGG | - | chr3.2:79018661-79018680 | MS.gene06508:CDS | 45.0% |
| !! | GGTGTATATGGTGGTGGTTT+GGG | - | chr3.2:79018241-79018260 | MS.gene06508:intron | 45.0% |
| AGCCGACAGAATTGAACCCT+AGG | + | chr3.2:79018512-79018531 | None:intergenic | 50.0% | |
| AGTGAGCACAAGAGAGCTTG+CGG | + | chr3.2:79019435-79019454 | None:intergenic | 50.0% | |
| AGTGTCACAGAATGTTCCCG+TGG | + | chr3.2:79020241-79020260 | None:intergenic | 50.0% | |
| CAATTCCAACACCCATGAGG+AGG | + | chr3.2:79019067-79019086 | None:intergenic | 50.0% | |
| CACCCATGAGGAGGATAGAT+AGG | + | chr3.2:79019058-79019077 | None:intergenic | 50.0% | |
| CAGCTACAACTCTGACAAGC+TGG | - | chr3.2:79018352-79018371 | MS.gene06508:intron | 50.0% | |
| CGTTAGCCGTTACCGAATCT+AGG | - | chr3.2:79018033-79018052 | MS.gene06508:CDS | 50.0% | |
| CTATACTTCCAAAGGGCCAC+AGG | + | chr3.2:79017956-79017975 | None:intergenic | 50.0% | |
| GATGCTGTGATTGACCCTGT+GGG | - | chr3.2:79020330-79020349 | MS.gene06508:CDS | 50.0% | |
| GCAAAAAGCTGTTGAAGCCG+CGG | - | chr3.2:79020134-79020153 | MS.gene06508:intron | 50.0% | |
| GCAGCAACCCTGTTAATCTC+TGG | - | chr3.2:79019715-79019734 | MS.gene06508:intron | 50.0% | |
| GCGTTAAAAACGAGCACGAG+TGG | + | chr3.2:79018933-79018952 | None:intergenic | 50.0% | |
| GTCAAAACAATGAGCCAGGG+AGG | + | chr3.2:79018885-79018904 | None:intergenic | 50.0% | |
| TCACGGGTAGGTCCAGAAAT+TGG | + | chr3.2:79018193-79018212 | None:intergenic | 50.0% | |
| TCTATCCTCCTCATGGGTGT+TGG | - | chr3.2:79019059-79019078 | MS.gene06508:intron | 50.0% | |
| TTCGTTAACAGGTGGCCCTT+TGG | - | chr3.2:79017988-79018007 | MS.gene06508:CDS | 50.0% | |
| TTCGTTAACCTGTGGCCCTT+TGG | - | chr3.2:79017945-79017964 | MS.gene06508:intron | 50.0% | |
| TTCTCCAGCTGAATGGGTCT+TGG | + | chr3.2:79020044-79020063 | None:intergenic | 50.0% | |
| ! | ACGTTTTCAGCTGGGAACTG+TGG | - | chr3.2:79017381-79017400 | MS.gene06508:CDS | 50.0% |
| ! | CGTTTTCAGCTGGGAACTGT+GGG | - | chr3.2:79017382-79017401 | MS.gene06508:CDS | 50.0% |
| ! | GCGGGTTAAAAAGAGGGGTA+AGG | + | chr3.2:79019416-79019435 | None:intergenic | 50.0% |
| ! | TCCACCAACTCAGCCTTATC+AGG | - | chr3.2:79017755-79017774 | MS.gene06508:CDS | 50.0% |
| !! | CTATTTTTCCATGCCCTCCC+TGG | - | chr3.2:79018868-79018887 | MS.gene06508:intron | 50.0% |
| !! | GGGTGTATATGGTGGTGGTT+TGG | - | chr3.2:79018240-79018259 | MS.gene06508:intron | 50.0% |
| ACAGGGGACTTATGTCCCAC+AGG | + | chr3.2:79020348-79020367 | None:intergenic | 55.0% | |
| CAGATTCGCCTTCTCTTGCC+TGG | + | chr3.2:79020281-79020300 | None:intergenic | 55.0% | |
| CAGGGGACTTATGTCCCACA+GGG | + | chr3.2:79020347-79020366 | None:intergenic | 55.0% | |
| CGATGCTGTGATTGACCCTG+TGG | - | chr3.2:79020329-79020348 | MS.gene06508:CDS | 55.0% | |
| GAGCACGAGTGGATGGCTAA+CGG | + | chr3.2:79018922-79018941 | None:intergenic | 55.0% | |
| GGCAGGAAGGGTTAACATGC+AGG | - | chr3.2:79019385-79019404 | MS.gene06508:intron | 55.0% | |
| GTGAGCACAAGAGAGCTTGC+GGG | + | chr3.2:79019434-79019453 | None:intergenic | 55.0% | |
| TCTGGACCTACCCGTGAAGT+AGG | - | chr3.2:79018196-79018215 | MS.gene06508:intron | 55.0% | |
| TGCTCCAAGACCCATTCAGC+TGG | - | chr3.2:79020037-79020056 | MS.gene06508:intron | 55.0% | |
| TGGGACATAAGTCCCCTGTC+TGG | - | chr3.2:79020349-79020368 | MS.gene06508:CDS | 55.0% | |
| ! | GCCTGATAAGGCTGAGTTGG+TGG | + | chr3.2:79017759-79017778 | None:intergenic | 55.0% |
| ACAATGAGCCAGGGAGGGCA+TGG | + | chr3.2:79018879-79018898 | None:intergenic | 60.0% | |
| CGCGCCTGATAAGGCTGAGT+TGG | + | chr3.2:79017762-79017781 | None:intergenic | 60.0% | |
| AACCTGGGATGCCTGTGCCG+CGG | + | chr3.2:79020154-79020173 | None:intergenic | 65.0% | |
| AGCTGTTGAAGCCGCGGCAC+AGG | - | chr3.2:79020140-79020159 | MS.gene06508:intron | 65.0% | |
| GCGGCACAGGCATCCCAGGT+TGG | - | chr3.2:79020153-79020172 | MS.gene06508:intron | 70.0% | |
| AGCCGCGGCACAGGCATCCC+AGG | - | chr3.2:79020149-79020168 | MS.gene06508:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 79017367 | 79020389 | 79017367 | ID=MS.gene06508 |
| chr3.2 | mRNA | 79017367 | 79020389 | 79017367 | ID=MS.gene06508.t1;Parent=MS.gene06508 |
| chr3.2 | exon | 79020290 | 79020389 | 79020290 | ID=MS.gene06508.t1.exon1;Parent=MS.gene06508.t1 |
| chr3.2 | CDS | 79020290 | 79020389 | 79020290 | ID=cds.MS.gene06508.t1;Parent=MS.gene06508.t1 |
| chr3.2 | exon | 79019217 | 79019401 | 79019217 | ID=MS.gene06508.t1.exon2;Parent=MS.gene06508.t1 |
| chr3.2 | CDS | 79019217 | 79019401 | 79019217 | ID=cds.MS.gene06508.t1;Parent=MS.gene06508.t1 |
| chr3.2 | exon | 79019062 | 79019129 | 79019062 | ID=MS.gene06508.t1.exon3;Parent=MS.gene06508.t1 |
| chr3.2 | CDS | 79019062 | 79019129 | 79019062 | ID=cds.MS.gene06508.t1;Parent=MS.gene06508.t1 |
| chr3.2 | exon | 79018587 | 79018719 | 79018587 | ID=MS.gene06508.t1.exon4;Parent=MS.gene06508.t1 |
| chr3.2 | CDS | 79018587 | 79018719 | 79018587 | ID=cds.MS.gene06508.t1;Parent=MS.gene06508.t1 |
| chr3.2 | exon | 79017952 | 79018113 | 79017952 | ID=MS.gene06508.t1.exon5;Parent=MS.gene06508.t1 |
| chr3.2 | CDS | 79017952 | 79018113 | 79017952 | ID=cds.MS.gene06508.t1;Parent=MS.gene06508.t1 |
| chr3.2 | exon | 79017586 | 79017858 | 79017586 | ID=MS.gene06508.t1.exon6;Parent=MS.gene06508.t1 |
| chr3.2 | CDS | 79017586 | 79017858 | 79017586 | ID=cds.MS.gene06508.t1;Parent=MS.gene06508.t1 |
| chr3.2 | exon | 79017367 | 79017474 | 79017367 | ID=MS.gene06508.t1.exon7;Parent=MS.gene06508.t1 |
| chr3.2 | CDS | 79017367 | 79017474 | 79017367 | ID=cds.MS.gene06508.t1;Parent=MS.gene06508.t1 |
| Gene Sequence |
| Protein sequence |
