AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065106

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065106.t1 MTR_1g111280 97.093 344 10 0 1 344 1 344 0.0 697
MS.gene065106.t1 MTR_7g406880 55.043 347 137 8 13 343 7 350 7.07e-125 362
MS.gene065106.t1 MTR_4g050140 36.420 324 190 8 25 341 4 318 7.20e-61 197
MS.gene065106.t1 MTR_4g086510 36.810 326 185 8 24 342 6 317 1.36e-57 189
MS.gene065106.t1 MTR_6g464510 37.294 303 167 7 16 306 4 295 3.65e-56 186
MS.gene065106.t1 MTR_1g102170 35.873 315 182 7 24 329 27 330 7.92e-56 185
MS.gene065106.t1 MTR_0007s0520 38.284 303 165 6 34 325 21 312 8.40e-56 185
MS.gene065106.t1 MTR_7g107040 37.748 302 166 8 26 318 7 295 1.51e-55 184
MS.gene065106.t1 MTR_1g012430 39.437 284 152 9 25 303 2 270 6.98e-55 182
MS.gene065106.t1 MTR_3g101420 35.737 319 177 9 27 331 8 312 1.10e-54 182
MS.gene065106.t1 MTR_7g056207 34.831 356 197 11 8 344 12 351 5.56e-54 181
MS.gene065106.t1 MTR_6g464320 36.156 307 167 7 41 333 31 322 2.13e-53 179
MS.gene065106.t1 MTR_8g035520 36.392 316 182 7 34 342 21 324 2.19e-53 179
MS.gene065106.t1 MTR_6g464120 38.276 290 159 5 39 319 29 307 3.75e-53 183
MS.gene065106.t1 MTR_6g464280 37.582 306 162 7 42 333 31 321 1.66e-52 176
MS.gene065106.t1 MTR_1g102160 33.951 324 182 8 34 342 19 325 2.21e-51 173
MS.gene065106.t1 MTR_8g035540 35.526 304 178 7 34 326 9 305 3.01e-50 171
MS.gene065106.t1 MTR_1g105020 32.390 318 196 9 28 335 10 318 3.09e-47 162
MS.gene065106.t1 MTR_4g086480 33.775 302 180 5 26 319 12 301 4.54e-47 162
MS.gene065106.t1 MTR_3g012440 32.919 322 183 10 22 320 3 314 1.49e-44 156
MS.gene065106.t1 MTR_4g086470 33.813 278 169 4 29 303 14 279 1.54e-44 155
MS.gene065106.t1 MTR_8g035500 32.792 308 185 10 34 329 12 309 3.70e-44 154
MS.gene065106.t1 MTR_6g065120 35.117 299 160 11 57 338 54 335 3.04e-42 150
MS.gene065106.t1 MTR_6g065400 32.450 302 173 9 52 338 48 333 9.60e-42 149
MS.gene065106.t1 MTR_1g089310 38.115 244 130 6 81 321 114 339 3.71e-41 147
MS.gene065106.t1 MTR_6g065270 34.106 302 164 11 56 338 50 335 4.02e-41 147
MS.gene065106.t1 MTR_1g089310 38.115 244 130 6 81 321 98 323 4.15e-41 147
MS.gene065106.t1 MTR_6g065430 35.849 265 148 8 61 318 58 307 9.89e-41 145
MS.gene065106.t1 MTR_8g040860 31.692 325 200 10 26 339 16 329 2.63e-40 144
MS.gene065106.t1 MTR_6g065110 32.792 308 177 10 46 338 42 334 3.74e-40 144
MS.gene065106.t1 MTR_3g450680 31.515 330 203 11 23 339 13 332 6.79e-40 144
MS.gene065106.t1 MTR_6g065370 30.795 302 178 9 52 338 48 333 6.92e-40 144
MS.gene065106.t1 MTR_5g005850 33.226 310 181 13 26 321 13 310 7.98e-40 143
MS.gene065106.t1 MTR_7g093950 37.143 245 136 5 81 321 99 329 1.82e-39 143
MS.gene065106.t1 MTR_1g082210 31.833 311 170 9 51 342 53 340 7.37e-39 141
MS.gene065106.t1 MTR_4g086540 29.936 314 185 8 24 333 16 298 4.56e-36 133
MS.gene065106.t1 MTR_6g065340 31.803 305 165 9 52 343 59 333 6.68e-36 133
MS.gene065106.t1 MTR_1g104930 33.808 281 175 7 26 303 12 284 5.85e-35 130
MS.gene065106.t1 MTR_5g005920 28.402 338 212 10 15 335 2 326 2.03e-34 129
MS.gene065106.t1 MTR_5g005900 32.646 291 170 10 26 302 9 287 3.21e-34 128
MS.gene065106.t1 MTR_7g051020 32.075 318 200 10 26 335 12 321 2.49e-33 126
MS.gene065106.t1 MTR_1g104933 34.155 284 166 8 26 303 10 278 1.87e-29 115
MS.gene065106.t1 MTR_0007s0480 40.625 160 84 4 174 325 2 158 1.13e-20 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065106.t1 AT5G16080 53.313 332 142 6 15 342 19 341 2.35e-115 338
MS.gene065106.t1 AT1G68620 51.090 321 139 5 26 342 23 329 7.81e-114 334
MS.gene065106.t1 AT5G62180 36.634 303 164 8 39 325 21 311 1.18e-54 182
MS.gene065106.t1 AT3G63010 37.091 275 133 8 68 321 69 324 1.29e-46 162
MS.gene065106.t1 AT1G19190 34.615 312 175 11 34 333 13 307 2.88e-46 160
MS.gene065106.t1 AT2G45600 35.254 295 172 8 57 342 31 315 2.33e-45 158
MS.gene065106.t1 AT3G05120 30.655 336 189 8 25 342 32 341 1.23e-44 156
MS.gene065106.t1 AT5G06570 37.086 302 174 8 26 318 10 304 2.99e-43 152
MS.gene065106.t1 AT5G06570 37.086 302 174 8 26 318 10 304 2.99e-43 152
MS.gene065106.t1 AT5G27320 33.981 309 165 9 51 342 53 339 3.03e-43 152
MS.gene065106.t1 AT2G45610 30.938 320 197 8 34 342 17 323 3.14e-43 152
MS.gene065106.t1 AT5G06570 37.417 302 173 8 26 318 25 319 3.29e-43 152
MS.gene065106.t1 AT5G06570 37.417 302 173 8 26 318 25 319 3.29e-43 152
MS.gene065106.t1 AT2G03550 33.441 311 185 9 33 336 12 307 2.78e-42 149
MS.gene065106.t1 AT3G48700 31.629 313 189 8 24 320 3 306 1.12e-41 148
MS.gene065106.t1 AT3G48690 33.218 289 175 9 24 303 3 282 2.08e-40 145
MS.gene065106.t1 AT5G23530 33.803 284 167 8 61 339 60 327 7.51e-40 143
MS.gene065106.t1 AT1G49650 30.935 278 174 7 33 303 68 334 3.01e-38 140
MS.gene065106.t1 AT1G49660 35.294 204 121 3 24 222 3 200 3.65e-38 139
MS.gene065106.t1 AT1G47480 29.747 316 189 9 36 342 18 309 2.08e-37 136
MS.gene065106.t1 AT1G49640 35.714 196 108 5 33 222 13 196 4.77e-36 133
MS.gene065106.t1 AT5G14310 29.496 278 157 7 79 321 140 413 6.52e-26 107
MS.gene065106.t1 AT3G27320 28.283 297 172 8 77 339 120 409 5.57e-23 99.4
MS.gene065106.t1 AT3G27320 28.283 297 172 8 77 339 152 441 7.13e-23 99.4

Find 65 sgRNAs with CRISPR-Local

Find 82 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAGACCCTTTAAATTTAA+AGG 0.113115 1.2:+82421645 None:intergenic
TCTAAGGCCTTTAAATTTAA+AGG 0.122353 1.2:-82421652 MS.gene065106:CDS
TAGCAGCTTCAGATACTTAT+TGG 0.192800 1.2:-82421539 MS.gene065106:CDS
GTGTAATCCATTGGTGAAAA+TGG 0.278139 1.2:-82421475 MS.gene065106:CDS
TTGACAGTGTTACAAACATT+TGG 0.291499 1.2:-82422055 MS.gene065106:CDS
TCTGTTGTTGAGGAAATTAA+AGG 0.293639 1.2:-82422185 MS.gene065106:CDS
CCTGAGATTTACTTAGAATC+TGG 0.322976 1.2:+82421304 None:intergenic
GTTGAATGTGAAGTGTTTAA+AGG 0.324790 1.2:-82421342 MS.gene065106:CDS
TTCACATGAATCTACCCTTT+TGG 0.340159 1.2:+82421683 None:intergenic
TGGGATAAGGTTTAGGTTTG+AGG 0.343721 1.2:+82422244 None:intergenic
CATGTTGTGGGATAAGGTTT+AGG 0.353922 1.2:+82422237 None:intergenic
CTAAGGCCTTTAAATTTAAA+GGG 0.355632 1.2:-82421651 MS.gene065106:CDS
CATGTGAAGGTGCATTTCTA+AGG 0.401620 1.2:-82421668 MS.gene065106:CDS
TGACAGTGTTACAAACATTT+GGG 0.402530 1.2:-82422054 MS.gene065106:CDS
AAATGCATGGAACAATTATC+TGG 0.405311 1.2:-82421576 MS.gene065106:CDS
CATGGTGGTGGTTTCTGTGT+TGG 0.410665 1.2:-82421975 MS.gene065106:CDS
TTTGAGGTAAGAGCAGTCAT+AGG 0.413432 1.2:+82422260 None:intergenic
GATAAGAGTTGTTCAAATGA+TGG 0.417122 1.2:-82421274 MS.gene065106:CDS
TATATTGAAGGATGGGAACT+TGG 0.427652 1.2:-82421400 MS.gene065106:CDS
TCTGTGTTGGTTCTGCAGCT+TGG 0.430002 1.2:-82421962 MS.gene065106:CDS
TAGCTTATAATGTTGCCAAA+AGG 0.432588 1.2:-82421698 MS.gene065106:CDS
TGTGATGCTTTAGGAAGAAC+AGG 0.432736 1.2:-82421372 MS.gene065106:CDS
GCTATGCTATCTTCAAAAGT+TGG 0.433482 1.2:-82421918 MS.gene065106:CDS
TGGCGATTGGCATTACCATA+TGG 0.434796 1.2:-82421519 MS.gene065106:CDS
AAGAACCTTGGTGTTGTTGA+TGG 0.457967 1.2:+82422207 None:intergenic
ATAGCATAGCAAGAAATTCA+TGG 0.460707 1.2:+82421931 None:intergenic
CTACCAGCACCTTATGATGA+TGG 0.461625 1.2:-82421849 MS.gene065106:CDS
CTGTTGTTGAGGAAATTAAA+GGG 0.462106 1.2:-82422184 MS.gene065106:CDS
AGCTTATAATGTTGCCAAAA+GGG 0.466546 1.2:-82421697 MS.gene065106:CDS
TTCAGATACTTATTGGCGAT+TGG 0.468433 1.2:-82421532 MS.gene065106:CDS
CCAAGGTTCTTCTGTTGTTG+AGG 0.469139 1.2:-82422195 MS.gene065106:CDS
TGTGAAGTGTTTAAAGGTGT+TGG 0.470256 1.2:-82421336 MS.gene065106:CDS
CCAGATTCTAAGTAAATCTC+AGG 0.474814 1.2:-82421304 MS.gene065106:CDS
GAGATGGATATATTGAAGGA+TGG 0.476380 1.2:-82421408 MS.gene065106:CDS
CTTTAGGAAGAACAGGTACA+AGG 0.492026 1.2:-82421365 MS.gene065106:CDS
TGATCACGATCTTCACCATA+TGG 0.493029 1.2:+82421504 None:intergenic
ATCTGAGATGGATATATTGA+AGG 0.500971 1.2:-82421412 MS.gene065106:CDS
CTAATTAAAGTACACAAAGA+TGG 0.506796 1.2:-82422161 MS.gene065106:CDS
GGATTGTGTCGAATCATTCA+TGG 0.508629 1.2:-82421253 MS.gene065106:CDS
GTGACACATGGAACAATGTT+GGG 0.516249 1.2:+82422125 None:intergenic
GCATTTAAACCATCATCATA+AGG 0.523827 1.2:+82421840 None:intergenic
TCATCATAAGGTGCTGGTAG+AGG 0.523884 1.2:+82421852 None:intergenic
TTCTTAGGAGGTGATAGTGC+AGG 0.529844 1.2:-82421729 MS.gene065106:CDS
AGTGACACATGGAACAATGT+TGG 0.542629 1.2:+82422124 None:intergenic
AAACCATCATCATAAGGTGC+TGG 0.546605 1.2:+82421846 None:intergenic
AGATGGATATATTGAAGGAT+GGG 0.547736 1.2:-82421407 MS.gene065106:CDS
CCTCAACAACAGAAGAACCT+TGG 0.574186 1.2:+82422195 None:intergenic
TCAGATATACACACCAACAT+AGG 0.575792 1.2:+82421429 None:intergenic
GCTACTGATGATGCCTATGT+TGG 0.579488 1.2:-82421442 MS.gene065106:CDS
ATGAGAGTAGTGAATTTGAA+TGG 0.584788 1.2:-82421782 MS.gene065106:CDS
GATTGTGTCGAATCATTCAT+GGG 0.584850 1.2:-82421252 MS.gene065106:CDS
AACATTATCAGAGAAATGCA+TGG 0.593132 1.2:-82421589 MS.gene065106:CDS
TTCACCAATGGATTACACCA+TGG 0.598695 1.2:+82421480 None:intergenic
GTTGGTGTGTATATCTGAGA+TGG 0.604384 1.2:-82421424 MS.gene065106:CDS
TCATCCATGGTGTAATCCAT+TGG 0.611826 1.2:-82421484 MS.gene065106:CDS
AAAAGGGTAGATTCATGTGA+AGG 0.616937 1.2:-82421681 MS.gene065106:CDS
CTAAACCTTATCCCACAACA+TGG 0.621453 1.2:-82422236 MS.gene065106:CDS
TAATCCATTGGTGAAAATGG+AGG 0.623717 1.2:-82421472 MS.gene065106:CDS
CCATGAAAATACACTAACAA+AGG 0.627388 1.2:+82421993 None:intergenic
GTGAAGATCGTGATCATCCA+TGG 0.631742 1.2:-82421497 MS.gene065106:CDS
CATAGATCAGAAGTGACACA+TGG 0.632301 1.2:+82422113 None:intergenic
TTTAGGAAGAACAGGTACAA+GGG 0.650756 1.2:-82421364 MS.gene065106:CDS
TTAGGAGGTGATAGTGCAGG+TGG 0.653434 1.2:-82421726 MS.gene065106:CDS
AGAGTAGTGAATTTGAATGG+TGG 0.668440 1.2:-82421779 MS.gene065106:CDS
ATGGTTTAAATGCACTAATG+TGG 0.680277 1.2:-82421830 MS.gene065106:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGACCCTTTAAATTTAA+AGG + chr1.2:82421860-82421879 None:intergenic 20.0%
!!! ATTTTGATACAACCATTTTT+TGG - chr1.2:82421878-82421897 MS.gene065106:CDS 20.0%
!!! CTTGAAGTTACATTTATTTT+TGG + chr1.2:82421416-82421435 None:intergenic 20.0%
! CTAAGGCCTTTAAATTTAAA+GGG - chr1.2:82421851-82421870 MS.gene065106:CDS 25.0%
! CTAATTAAAGTACACAAAGA+TGG - chr1.2:82421341-82421360 MS.gene065106:CDS 25.0%
!! AACTTTTCTAATGTCTTCTT+AGG - chr1.2:82421758-82421777 MS.gene065106:CDS 25.0%
!! TCTAAGGCCTTTAAATTTAA+AGG - chr1.2:82421850-82421869 MS.gene065106:CDS 25.0%
!!! AGTTTTTTTGTGTTGGAATT+TGG + chr1.2:82421488-82421507 None:intergenic 25.0%
AAATGCATGGAACAATTATC+TGG - chr1.2:82421926-82421945 MS.gene065106:CDS 30.0%
AACATTATCAGAGAAATGCA+TGG - chr1.2:82421913-82421932 MS.gene065106:CDS 30.0%
AGATGGATATATTGAAGGAT+GGG - chr1.2:82422095-82422114 MS.gene065106:CDS 30.0%
AGCTTATAATGTTGCCAAAA+GGG - chr1.2:82421805-82421824 MS.gene065106:CDS 30.0%
ATAGCATAGCAAGAAATTCA+TGG + chr1.2:82421574-82421593 None:intergenic 30.0%
ATGAGAGTAGTGAATTTGAA+TGG - chr1.2:82421720-82421739 MS.gene065106:CDS 30.0%
ATGGTTTAAATGCACTAATG+TGG - chr1.2:82421672-82421691 MS.gene065106:CDS 30.0%
CCATGAAAATACACTAACAA+AGG + chr1.2:82421512-82421531 None:intergenic 30.0%
CTGTTGTTGAGGAAATTAAA+GGG - chr1.2:82421318-82421337 MS.gene065106:CDS 30.0%
GATAAGAGTTGTTCAAATGA+TGG - chr1.2:82422228-82422247 MS.gene065106:CDS 30.0%
GCATTTAAACCATCATCATA+AGG + chr1.2:82421665-82421684 None:intergenic 30.0%
TAGCTTATAATGTTGCCAAA+AGG - chr1.2:82421804-82421823 MS.gene065106:CDS 30.0%
TCTGTTGTTGAGGAAATTAA+AGG - chr1.2:82421317-82421336 MS.gene065106:CDS 30.0%
TGACAGTGTTACAAACATTT+GGG - chr1.2:82421448-82421467 MS.gene065106:CDS 30.0%
TTGACAGTGTTACAAACATT+TGG - chr1.2:82421447-82421466 MS.gene065106:CDS 30.0%
! ATCTGAGATGGATATATTGA+AGG - chr1.2:82422090-82422109 MS.gene065106:CDS 30.0%
! CCTTTGTTAGTGTATTTTCA+TGG - chr1.2:82421509-82421528 MS.gene065106:CDS 30.0%
! CTTTCTTTTCCACCAAAAAA+TGG + chr1.2:82421893-82421912 None:intergenic 30.0%
! GTTGAATGTGAAGTGTTTAA+AGG - chr1.2:82422160-82422179 MS.gene065106:CDS 30.0%
! TTGTTAGTGTATTTTCATGG+TGG - chr1.2:82421512-82421531 MS.gene065106:CDS 30.0%
! TTTTCTAATGTCTTCTTAGG+AGG - chr1.2:82421761-82421780 MS.gene065106:CDS 30.0%
!!! CAAAGGTAGTTTTTTTGTGT+TGG + chr1.2:82421495-82421514 None:intergenic 30.0%
!!! TTGATACAACCATTTTTTGG+TGG - chr1.2:82421881-82421900 MS.gene065106:CDS 30.0%
AAAAACCATCAACAACACCA+AGG - chr1.2:82421290-82421309 MS.gene065106:CDS 35.0%
AAAAGGGTAGATTCATGTGA+AGG - chr1.2:82421821-82421840 MS.gene065106:CDS 35.0%
AGAGTAGTGAATTTGAATGG+TGG - chr1.2:82421723-82421742 MS.gene065106:CDS 35.0%
CCAGATTCTAAGTAAATCTC+AGG - chr1.2:82422198-82422217 MS.gene065106:CDS 35.0%
CCTGAGATTTACTTAGAATC+TGG + chr1.2:82422201-82422220 None:intergenic 35.0%
GAGATGGATATATTGAAGGA+TGG - chr1.2:82422094-82422113 MS.gene065106:CDS 35.0%
GATTGTGTCGAATCATTCAT+GGG - chr1.2:82422250-82422269 MS.gene065106:CDS 35.0%
GCTATGCTATCTTCAAAAGT+TGG - chr1.2:82421584-82421603 MS.gene065106:CDS 35.0%
GTGTAATCCATTGGTGAAAA+TGG - chr1.2:82422027-82422046 MS.gene065106:CDS 35.0%
TAATCCATTGGTGAAAATGG+AGG - chr1.2:82422030-82422049 MS.gene065106:CDS 35.0%
TAGCAGCTTCAGATACTTAT+TGG - chr1.2:82421963-82421982 MS.gene065106:CDS 35.0%
TATATTGAAGGATGGGAACT+TGG - chr1.2:82422102-82422121 MS.gene065106:CDS 35.0%
TCAGATATACACACCAACAT+AGG + chr1.2:82422076-82422095 None:intergenic 35.0%
TTCAGATACTTATTGGCGAT+TGG - chr1.2:82421970-82421989 MS.gene065106:CDS 35.0%
TTTAGGAAGAACAGGTACAA+GGG - chr1.2:82422138-82422157 MS.gene065106:CDS 35.0%
! AATTCCTCCATTTTCACCAA+TGG + chr1.2:82422037-82422056 None:intergenic 35.0%
! GATGGTTTTTACCATGTTGT+GGG + chr1.2:82421280-82421299 None:intergenic 35.0%
! TGATGGTTTTTACCATGTTG+TGG + chr1.2:82421281-82421300 None:intergenic 35.0%
! TGTGAAGTGTTTAAAGGTGT+TGG - chr1.2:82422166-82422185 MS.gene065106:CDS 35.0%
! TTAGTGTATTTTCATGGTGG+TGG - chr1.2:82421515-82421534 MS.gene065106:CDS 35.0%
! TTCACATGAATCTACCCTTT+TGG + chr1.2:82421822-82421841 None:intergenic 35.0%
! TTTTACCATGTTGTGGGATA+AGG + chr1.2:82421274-82421293 None:intergenic 35.0%
!! TTGGAGTTTTGTGATGCTTT+AGG - chr1.2:82422121-82422140 MS.gene065106:CDS 35.0%
AAACCATCATCATAAGGTGC+TGG + chr1.2:82421659-82421678 None:intergenic 40.0%
AGTGACACATGGAACAATGT+TGG + chr1.2:82421381-82421400 None:intergenic 40.0%
CATAGATCAGAAGTGACACA+TGG + chr1.2:82421392-82421411 None:intergenic 40.0%
CATGTTGTGGGATAAGGTTT+AGG + chr1.2:82421268-82421287 None:intergenic 40.0%
CTAAACCTTATCCCACAACA+TGG - chr1.2:82421266-82421285 MS.gene065106:CDS 40.0%
GGATTGTGTCGAATCATTCA+TGG - chr1.2:82422249-82422268 MS.gene065106:CDS 40.0%
GTGACACATGGAACAATGTT+GGG + chr1.2:82421380-82421399 None:intergenic 40.0%
GTTGGTGTGTATATCTGAGA+TGG - chr1.2:82422078-82422097 MS.gene065106:CDS 40.0%
TCATCCATGGTGTAATCCAT+TGG - chr1.2:82422018-82422037 MS.gene065106:CDS 40.0%
TGATCACGATCTTCACCATA+TGG + chr1.2:82422001-82422020 None:intergenic 40.0%
! CATGTGAAGGTGCATTTCTA+AGG - chr1.2:82421834-82421853 MS.gene065106:CDS 40.0%
! CTTTAGGAAGAACAGGTACA+AGG - chr1.2:82422137-82422156 MS.gene065106:CDS 40.0%
! TGGGATAAGGTTTAGGTTTG+AGG + chr1.2:82421261-82421280 None:intergenic 40.0%
!! AAGAACCTTGGTGTTGTTGA+TGG + chr1.2:82421298-82421317 None:intergenic 40.0%
!! TGTGATGCTTTAGGAAGAAC+AGG - chr1.2:82422130-82422149 MS.gene065106:CDS 40.0%
!! TTCACCAATGGATTACACCA+TGG + chr1.2:82422025-82422044 None:intergenic 40.0%
CCAAGGTTCTTCTGTTGTTG+AGG - chr1.2:82421307-82421326 MS.gene065106:CDS 45.0%
CCTCAACAACAGAAGAACCT+TGG + chr1.2:82421310-82421329 None:intergenic 45.0%
CTACCAGCACCTTATGATGA+TGG - chr1.2:82421653-82421672 MS.gene065106:CDS 45.0%
GTGAAGATCGTGATCATCCA+TGG - chr1.2:82422005-82422024 MS.gene065106:CDS 45.0%
TGGCGATTGGCATTACCATA+TGG - chr1.2:82421983-82422002 MS.gene065106:CDS 45.0%
! GCTACTGATGATGCCTATGT+TGG - chr1.2:82422060-82422079 MS.gene065106:CDS 45.0%
! TTCTTAGGAGGTGATAGTGC+AGG - chr1.2:82421773-82421792 MS.gene065106:CDS 45.0%
!! TCATCATAAGGTGCTGGTAG+AGG + chr1.2:82421653-82421672 None:intergenic 45.0%
! TTAGGAGGTGATAGTGCAGG+TGG - chr1.2:82421776-82421795 MS.gene065106:CDS 50.0%
!! CATGGTGGTGGTTTCTGTGT+TGG - chr1.2:82421527-82421546 MS.gene065106:CDS 50.0%
!! TCTGTGTTGGTTCTGCAGCT+TGG - chr1.2:82421540-82421559 MS.gene065106:CDS 50.0%
!!! GGTGCTGGTAGAGGATTTTC+TGG + chr1.2:82421644-82421663 None:intergenic 50.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 82421245 82422279 82421245 ID=MS.gene065106
chr1.2 mRNA 82421245 82422279 82421245 ID=MS.gene065106.t1;Parent=MS.gene065106
chr1.2 exon 82421245 82422279 82421245 ID=MS.gene065106.t1.exon1;Parent=MS.gene065106.t1
chr1.2 CDS 82421245 82422279 82421245 ID=cds.MS.gene065106.t1;Parent=MS.gene065106.t1
Gene Sequence

>MS.gene065106

ATGACTGCTCTTACCTCAAACCTAAACCTTATCCCACAACATGGTAAAAACCATCAACAACACCAAGGTTCTTCTGTTGTTGAGGAAATTAAAGGGCTAATTAAAGTACACAAAGATGGATATATAGAACGACCCAACATTGTTCCATGTGTCACTTCTGATCTATGTCCAAAAATAAATGTAACTTCAAGAGACATTATCATTGACAGTGTTACAAACATTTGGGCACGTTTCTATGTTCCAAATTCCAACACAAAAAAACTACCTTTGTTAGTGTATTTTCATGGTGGTGGTTTCTGTGTTGGTTCTGCAGCTTGGAGTTGCTACCATGAATTTCTTGCTATGCTATCTTCAAAAGTTGGTTGCTTGATTATGTCAGTTAACTATAGATTAGCACCAGAAAATCCTCTACCAGCACCTTATGATGATGGTTTAAATGCACTAATGTGGTTGAAAAAACAATTTTTATATCAAAATGAGAGTAGTGAATTTGAATGGTGGACTAAAAAATGCAACTTTTCTAATGTCTTCTTAGGAGGTGATAGTGCAGGTGGTAACATAGCTTATAATGTTGCCAAAAGGGTAGATTCATGTGAAGGTGCATTTCTAAGGCCTTTAAATTTAAAGGGTCTTATTTTGATACAACCATTTTTTGGTGGAAAAGAAAGAACATTATCAGAGAAATGCATGGAACAATTATCTGGTTCTGCTTTGAATTTAGCAGCTTCAGATACTTATTGGCGATTGGCATTACCATATGGTGAAGATCGTGATCATCCATGGTGTAATCCATTGGTGAAAATGGAGGAATTGAAGCTACTGATGATGCCTATGTTGGTGTGTATATCTGAGATGGATATATTGAAGGATGGGAACTTGGAGTTTTGTGATGCTTTAGGAAGAACAGGTACAAGGGTTGAATGTGAAGTGTTTAAAGGTGTTGGACATGCTTTCCAGATTCTAAGTAAATCTCAGGTCTCTAAGATAAGAGTTGTTCAAATGATGGATTGTGTCGAATCATTCATGGGTCTTTGA
Protein sequence

>MS.gene065106.t1

MTALTSNLNLIPQHGKNHQQHQGSSVVEEIKGLIKVHKDGYIERPNIVPCVTSDLCPKINVTSRDIIIDSVTNIWARFYVPNSNTKKLPLLVYFHGGGFCVGSAAWSCYHEFLAMLSSKVGCLIMSVNYRLAPENPLPAPYDDGLNALMWLKKQFLYQNESSEFEWWTKKCNFSNVFLGGDSAGGNIAYNVAKRVDSCEGAFLRPLNLKGLILIQPFFGGKERTLSEKCMEQLSGSALNLAASDTYWRLALPYGEDRDHPWCNPLVKMEELKLLMMPMLVCISEMDILKDGNLEFCDALGRTGTRVECEVFKGVGHAFQILSKSQVSKIRVVQMMDCVESFMGL