AlfalfaGEDB | MS.gene91548

M. sativa cultivar XinJiangDaYe / MS.gene91548

KEGG: K14493
GO: GO:0003674 GO:0003824 GO:0016787
PFAM: PF07859.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91548.t1	XP_024638169.1	99.7	334	1	0	1	334	1	334	5.40E-196	693.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91548.t1	Q940G6	77.9	330	72	1	4	333	15	343	8.5e-158	557.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91548.t1	G7I7F8	99.4	333	2	0	2	334	13	345	3.3e-195	690.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049150	MS.gene91548	0.815038	1.13E-51	-1.69E-46
MS.gene049151	MS.gene91548	0.812686	3.74E-51	-1.69E-46
MS.gene049260	MS.gene91548	0.839312	1.71E-57	-1.69E-46
MS.gene049297	MS.gene91548	0.849298	3.54E-60	-1.69E-46
MS.gene049346	MS.gene91548	0.821949	3.08E-53	-1.69E-46
MS.gene049378	MS.gene91548	0.818336	2.07E-52	-1.69E-46
MS.gene049758	MS.gene91548	0.841049	6.01E-58	-1.69E-46
MS.gene050226	MS.gene91548	0.812473	4.17E-51	-1.69E-46
MS.gene050227	MS.gene91548	0.810264	1.26E-50	-1.69E-46
MS.gene050228	MS.gene91548	0.805609	1.23E-49	-1.69E-46
MS.gene050301	MS.gene91548	0.83572	1.42E-56	-1.69E-46
MS.gene050330	MS.gene91548	-0.838699	2.46E-57	-1.69E-46
MS.gene050404	MS.gene91548	0.811285	7.56E-51	-1.69E-46
MS.gene050406	MS.gene91548	0.804642	1.96E-49	-1.69E-46
MS.gene050558	MS.gene91548	0.803955	2.72E-49	-1.69E-46
MS.gene050623	MS.gene91548	-0.800136	1.66E-48	-1.69E-46
MS.gene050642	MS.gene91548	0.855529	5.93E-62	-1.69E-46
MS.gene050987	MS.gene91548	0.810093	1.37E-50	-1.69E-46
MS.gene051171	MS.gene91548	0.812046	5.16E-51	-1.69E-46
MS.gene05119	MS.gene91548	-0.802913	4.48E-49	-1.69E-46
MS.gene051240	MS.gene91548	0.835349	1.77E-56	-1.69E-46
MS.gene051242	MS.gene91548	0.81478	1.29E-51	-1.69E-46
MS.gene051662	MS.gene91548	0.804584	2.01E-49	-1.69E-46
MS.gene051663	MS.gene91548	0.811695	6.16E-51	-1.69E-46
MS.gene051860	MS.gene91548	0.811321	7.42E-51	-1.69E-46
MS.gene051983	MS.gene91548	0.836621	8.41E-57	-1.69E-46
MS.gene052077	MS.gene91548	0.80815	3.57E-50	-1.69E-46
MS.gene052176	MS.gene91548	0.864169	1.48E-64	-1.69E-46
MS.gene052178	MS.gene91548	0.836354	9.83E-57	-1.69E-46
MS.gene052302	MS.gene91548	0.816255	6.08E-52	-1.69E-46
MS.gene052309	MS.gene91548	-0.810658	1.03E-50	-1.69E-46
MS.gene052340	MS.gene91548	0.817059	4.01E-52	-1.69E-46
MS.gene052376	MS.gene91548	0.815331	9.76E-52	-1.69E-46
MS.gene052389	MS.gene91548	0.818607	1.79E-52	-1.69E-46
MS.gene052600	MS.gene91548	0.848756	5.00E-60	-1.69E-46
MS.gene053836	MS.gene91548	0.86403	1.63E-64	-1.69E-46
MS.gene053907	MS.gene91548	0.83377	4.41E-56	-1.69E-46
MS.gene053971	MS.gene91548	0.813446	2.55E-51	-1.69E-46
MS.gene054011	MS.gene91548	0.81016	1.32E-50	-1.69E-46
MS.gene054012	MS.gene91548	0.804593	2.01E-49	-1.69E-46
MS.gene054214	MS.gene91548	0.810649	1.04E-50	-1.69E-46
MS.gene054379	MS.gene91548	0.801989	6.94E-49	-1.69E-46
MS.gene054473	MS.gene91548	0.852943	3.31E-61	-1.69E-46
MS.gene054930	MS.gene91548	0.835732	1.41E-56	-1.69E-46
MS.gene054942	MS.gene91548	0.849274	3.59E-60	-1.69E-46
MS.gene054983	MS.gene91548	0.843733	1.17E-58	-1.69E-46
MS.gene055277	MS.gene91548	0.806044	9.96E-50	-1.69E-46
MS.gene055358	MS.gene91548	0.801495	8.76E-49	-1.69E-46
MS.gene055422	MS.gene91548	0.812216	4.74E-51	-1.69E-46
MS.gene055428	MS.gene91548	0.859002	5.59E-63	-1.69E-46
MS.gene05553	MS.gene91548	0.809896	1.51E-50	-1.69E-46
MS.gene055604	MS.gene91548	0.837153	6.15E-57	-1.69E-46
MS.gene056069	MS.gene91548	-0.809942	1.47E-50	-1.69E-46
MS.gene056612	MS.gene91548	0.823585	1.28E-53	-1.69E-46
MS.gene056723	MS.gene91548	0.803035	4.22E-49	-1.69E-46
MS.gene056772	MS.gene91548	0.8554	6.47E-62	-1.69E-46
MS.gene056979	MS.gene91548	0.820264	7.52E-53	-1.69E-46
MS.gene05702	MS.gene91548	0.847663	1.00E-59	-1.69E-46
MS.gene057121	MS.gene91548	0.824189	9.24E-54	-1.69E-46
MS.gene057439	MS.gene91548	0.817602	3.03E-52	-1.69E-46
MS.gene057639	MS.gene91548	0.824554	7.58E-54	-1.69E-46
MS.gene058002	MS.gene91548	0.839911	1.19E-57	-1.69E-46
MS.gene05811	MS.gene91548	0.827706	1.35E-54	-1.69E-46
MS.gene058142	MS.gene91548	0.868802	4.98E-66	-1.69E-46
MS.gene058201	MS.gene91548	0.810219	1.29E-50	-1.69E-46
MS.gene058233	MS.gene91548	0.808871	2.50E-50	-1.69E-46
MS.gene058276	MS.gene91548	0.812348	4.43E-51	-1.69E-46
MS.gene058710	MS.gene91548	0.808951	2.41E-50	-1.69E-46
MS.gene058749	MS.gene91548	0.853451	2.37E-61	-1.69E-46
MS.gene058833	MS.gene91548	0.827517	1.50E-54	-1.69E-46
MS.gene05907	MS.gene91548	0.808956	2.40E-50	-1.69E-46
MS.gene059247	MS.gene91548	0.811506	6.77E-51	-1.69E-46
MS.gene059518	MS.gene91548	0.812905	3.35E-51	-1.69E-46
MS.gene05984	MS.gene91548	0.837467	5.11E-57	-1.69E-46
MS.gene059894	MS.gene91548	0.847815	9.11E-60	-1.69E-46
MS.gene059899	MS.gene91548	0.834146	3.55E-56	-1.69E-46
MS.gene06037	MS.gene91548	0.80208	6.65E-49	-1.69E-46
MS.gene060407	MS.gene91548	0.830127	3.50E-55	-1.69E-46
MS.gene060476	MS.gene91548	0.827568	1.46E-54	-1.69E-46
MS.gene061049	MS.gene91548	0.860589	1.86E-63	-1.69E-46
MS.gene061112	MS.gene91548	0.820275	7.48E-53	-1.69E-46
MS.gene061113	MS.gene91548	0.803165	3.97E-49	-1.69E-46
MS.gene061265	MS.gene91548	0.822091	2.85E-53	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene91548	MS.gene93628	PPI
MS.gene91548	MS.gene76276	PPI
MS.gene91548	MS.gene062655	PPI
MS.gene91548	MS.gene018032	PPI
MS.gene91548	MS.gene062669	PPI
MS.gene91548	MS.gene042786	PPI
MS.gene91548	MS.gene97877	PPI
MS.gene91548	MS.gene042787	PPI
MS.gene91548	MS.gene068472	PPI
MS.gene91548	MS.gene068460	PPI
MS.gene91548	MS.gene062660	PPI
MS.gene018032	MS.gene91548	PPI
MS.gene91548	MS.gene21543	PPI
MS.gene91548	MS.gene055956	PPI
MS.gene91548	MS.gene029377	PPI
MS.gene91548	MS.gene042778	PPI
MS.gene91548	MS.gene068475	PPI
MS.gene91548	MS.gene54227	PPI
MS.gene91548	MS.gene065106	PPI
MS.gene91548	MS.gene52704	PPI
MS.gene91548	MS.gene005657	PPI
MS.gene91548	MS.gene068477	PPI
MS.gene91548	MS.gene07155	PPI
MS.gene91548	MS.gene062670	PPI
MS.gene91548	MS.gene04666	PPI
MS.gene91548	MS.gene93630	PPI
MS.gene91548	MS.gene062658	PPI
MS.gene91548	MS.gene069338	PPI
MS.gene91548	MS.gene042779	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91548.t1	MTR_1g082210	99.399	333	2	0	2	334	13	345	0.0	684
MS.gene91548.t1	MTR_1g089310	72.072	333	91	2	2	333	29	360	0.0	512
MS.gene91548.t1	MTR_1g089310	72.072	333	91	2	2	333	13	344	0.0	511
MS.gene91548.t1	MTR_7g093950	71.681	339	88	6	2	333	13	350	8.03e-179	499
MS.gene91548.t1	MTR_6g065400	40.909	330	188	2	4	330	9	334	1.66e-83	256
MS.gene91548.t1	MTR_6g065110	39.583	336	196	2	2	334	8	339	1.87e-79	246
MS.gene91548.t1	MTR_6g065120	40.836	311	176	3	24	330	30	336	4.68e-79	245
MS.gene91548.t1	MTR_6g065370	39.091	330	194	2	4	330	9	334	3.80e-77	240
MS.gene91548.t1	MTR_6g065270	35.714	336	210	2	1	330	1	336	4.05e-74	232
MS.gene91548.t1	MTR_6g065430	38.065	310	176	4	25	329	29	327	4.60e-66	211
MS.gene91548.t1	MTR_6g065340	35.045	331	189	4	6	330	19	329	1.04e-62	202
MS.gene91548.t1	MTR_4g050140	35.417	288	157	6	56	329	43	315	2.41e-46	160
MS.gene91548.t1	MTR_7g406880	32.468	308	170	7	50	330	54	350	2.35e-42	150
MS.gene91548.t1	MTR_1g111280	31.310	313	175	8	42	332	51	345	1.26e-38	140
MS.gene91548.t1	MTR_7g107040	30.690	290	167	7	56	331	45	314	2.58e-37	136
MS.gene91548.t1	MTR_8g035540	29.878	328	190	9	27	334	14	321	5.16e-37	135
MS.gene91548.t1	MTR_3g101420	29.373	303	169	7	42	333	32	300	1.31e-36	134
MS.gene91548.t1	MTR_1g102170	33.223	301	175	9	21	311	37	321	1.16e-35	132
MS.gene91548.t1	MTR_1g012430	32.117	274	161	6	27	294	16	270	1.40e-35	131
MS.gene91548.t1	MTR_8g035520	30.769	325	183	9	26	331	25	326	2.16e-35	131
MS.gene91548.t1	MTR_7g056207	31.046	306	182	8	42	334	65	354	7.78e-35	130
MS.gene91548.t1	MTR_6g464510	30.065	306	177	9	21	309	22	307	6.51e-34	127
MS.gene91548.t1	MTR_1g102160	32.624	282	162	8	27	294	24	291	1.49e-33	126
MS.gene91548.t1	MTR_8g035500	31.613	310	178	10	14	310	8	296	2.15e-33	125
MS.gene91548.t1	MTR_6g464120	33.884	242	134	7	21	253	23	247	3.26e-33	129
MS.gene91548.t1	MTR_3g012440	32.627	236	148	3	86	311	80	314	1.31e-32	124
MS.gene91548.t1	MTR_4g086510	30.132	302	182	8	42	330	33	318	1.37e-32	124
MS.gene91548.t1	MTR_6g464320	30.363	303	185	9	20	308	15	305	4.70e-32	122
MS.gene91548.t1	MTR_0007s0520	32.883	222	127	5	42	254	38	246	9.13e-32	121
MS.gene91548.t1	MTR_6g022710	31.660	259	136	4	94	312	160	417	1.85e-30	120
MS.gene91548.t1	MTR_6g464280	30.769	234	143	6	26	252	23	244	6.61e-30	116
MS.gene91548.t1	MTR_4g086480	28.146	302	183	11	42	329	37	318	1.75e-29	115
MS.gene91548.t1	MTR_3g450680	28.221	326	188	11	27	329	29	331	7.25e-29	114
MS.gene91548.t1	MTR_4g086470	30.303	264	153	9	42	294	36	279	1.97e-27	109
MS.gene91548.t1	MTR_4g086540	28.617	311	172	11	27	328	31	300	2.72e-27	109
MS.gene91548.t1	MTR_1g105020	29.293	297	168	9	27	303	21	295	2.63e-26	107
MS.gene91548.t1	MTR_5g005920	28.065	310	188	10	14	304	9	302	3.14e-26	106
MS.gene91548.t1	MTR_5g005900	26.073	303	182	9	12	296	12	290	1.02e-24	102
MS.gene91548.t1	MTR_7g051020	31.343	268	149	8	54	304	48	297	2.25e-24	101
MS.gene91548.t1	MTR_8g040860	26.230	305	190	9	43	330	43	329	2.53e-24	101
MS.gene91548.t1	MTR_1g104930	31.707	287	150	11	27	294	25	284	1.01e-23	99.8
MS.gene91548.t1	MTR_5g005850	26.780	295	177	9	27	303	26	299	1.92e-23	99.0
MS.gene91548.t1	MTR_1g104933	31.641	256	137	8	54	294	46	278	4.19e-23	97.8
MS.gene91548.t1	MTR_6g065470	35.461	141	72	4	22	158	37	162	1.71e-15	73.6
MS.gene91548.t1	MTR_0007s0480	37.079	89	49	1	172	253	3	91	1.43e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91548.t1	AT5G27320	77.410	332	74	1	2	333	13	343	0.0	555
MS.gene91548.t1	AT3G05120	76.276	333	78	1	2	333	13	345	0.0	546
MS.gene91548.t1	AT3G63010	69.880	332	97	3	2	331	13	343	3.16e-177	495
MS.gene91548.t1	AT5G23530	36.202	337	188	6	2	330	10	327	1.23e-67	215
MS.gene91548.t1	AT5G62180	33.449	287	172	7	21	297	15	292	6.09e-42	149
MS.gene91548.t1	AT1G68620	35.887	248	138	5	51	291	57	290	3.27e-41	147
MS.gene91548.t1	AT5G06570	33.651	315	170	8	36	331	33	327	2.70e-40	144
MS.gene91548.t1	AT5G06570	33.651	315	170	8	36	331	33	327	2.70e-40	144
MS.gene91548.t1	AT5G06570	33.651	315	170	8	36	331	48	342	3.32e-40	144
MS.gene91548.t1	AT5G06570	33.651	315	170	8	36	331	48	342	3.32e-40	144
MS.gene91548.t1	AT5G16080	32.000	300	166	8	42	325	53	330	4.58e-38	139
MS.gene91548.t1	AT1G47480	30.070	286	175	6	22	303	16	280	2.60e-35	130
MS.gene91548.t1	AT2G45610	32.095	296	171	9	21	301	16	296	1.27e-34	129
MS.gene91548.t1	AT2G45600	33.585	265	144	7	54	301	39	288	2.97e-34	128
MS.gene91548.t1	AT2G03550	31.230	317	180	10	28	330	19	311	4.02e-34	127
MS.gene91548.t1	AT1G19190	32.039	309	172	11	42	333	30	317	5.85e-34	127
MS.gene91548.t1	AT3G48700	33.231	325	163	13	39	332	27	328	2.15e-33	126
MS.gene91548.t1	AT5G14310	31.439	264	135	4	94	312	151	413	5.74e-33	127
MS.gene91548.t1	AT3G48690	32.234	273	151	7	39	294	27	282	6.88e-33	124
MS.gene91548.t1	AT3G27320	33.080	263	131	5	94	312	134	395	4.30e-31	122
MS.gene91548.t1	AT3G27320	33.080	263	131	5	94	312	166	427	7.73e-31	121
MS.gene91548.t1	AT1G49650	30.798	263	158	7	42	294	86	334	6.73e-29	115
MS.gene91548.t1	AT1G49660	30.038	263	157	6	42	292	30	277	1.86e-26	107
MS.gene91548.t1	AT1G49640	29.020	255	165	5	43	293	32	274	2.43e-26	107

Find 91 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACAGAGAAATGCTCATTATT+TGG	0.229509	1.2:+60646591	None:intergenic
CCATCAAGGCTTCGACCTTT+TGG	0.246635	1.2:+60646762	None:intergenic
TTGTCGTCTCGGTGAATTAT+AGG	0.247260	1.2:-60647142	MS.gene91548:CDS
ATGGGTGGAAAGCTGTTAAA+TGG	0.260029	1.2:-60647082	MS.gene91548:CDS
AAGAGTCTTGTGGTGGTTGC+TGG	0.278599	1.2:-60646726	MS.gene91548:CDS
TGATCTCTGTCTTCCCCTTC+AGG	0.298031	1.2:+60646807	None:intergenic
TGCTGGTTTGGATCTTGTTC+AGG	0.302371	1.2:-60646709	MS.gene91548:CDS
ATTGTATGCTAACTTGAAAT+TGG	0.306162	1.2:+60647487	None:intergenic
TCTTGTGGTGGTTGCTGGTT+TGG	0.332790	1.2:-60646721	MS.gene91548:CDS
TCCAGCTTTCTCAAGTCCTT+TGG	0.334783	1.2:+60646668	None:intergenic
TCCACAGGATTCGCATTTGC+TGG	0.346221	1.2:+60647401	None:intergenic
AGCATTGGACTCTGGGATTC+CGG	0.350883	1.2:-60646955	MS.gene91548:CDS
GCAACCACCACAAGACTCTT+AGG	0.357754	1.2:+60646729	None:intergenic
ATAGGCGTGCGCCTGAAAAT+AGG	0.363489	1.2:-60647124	MS.gene91548:CDS
CTTGTTCAGGATTGGCAATT+GGG	0.363782	1.2:-60646696	MS.gene91548:CDS
TCTTGTTCAGGATTGGCAAT+TGG	0.368427	1.2:-60646697	MS.gene91548:CDS
GACTCTGGGATTCCGGTGTT+GGG	0.383791	1.2:-60646948	MS.gene91548:CDS
CATTGAAAGCATTGGACTCT+GGG	0.392347	1.2:-60646962	MS.gene91548:CDS
GGACTCTGGGATTCCGGTGT+TGG	0.395996	1.2:-60646949	MS.gene91548:CDS
ATACTGCTAAACCCTTTGTT+TGG	0.396562	1.2:-60646921	MS.gene91548:CDS
TTCTCGAGCAAGCCACGGTT+GGG	0.404625	1.2:-60646626	MS.gene91548:CDS
GGAAGAACCTCAGCAGTAAC+AGG	0.409700	1.2:+60647266	None:intergenic
GTTTGGATCTTGTTCAGGAT+TGG	0.415765	1.2:-60646704	MS.gene91548:CDS
GAATCCGAAAAGCGTCTTGA+TGG	0.417426	1.2:-60646882	MS.gene91548:CDS
TGAAAGATAGAGACTGGTAT+TGG	0.418998	1.2:-60646842	MS.gene91548:CDS
TGTTGTTCTTCTCCCTCAAC+AGG	0.421393	1.2:+60647314	None:intergenic
CATCACGCGTGTAACCCTTT+TGG	0.421489	1.2:-60646786	MS.gene91548:CDS
CGAATCTACCGTCCTGTTGA+GGG	0.426280	1.2:-60647326	MS.gene91548:CDS
CCAAAAGGTCGAAGCCTTGA+TGG	0.429491	1.2:-60646762	MS.gene91548:CDS
TGCTAAACCCTTTGTTTGGC+GGG	0.429653	1.2:-60646917	MS.gene91548:CDS
ATCAAAACCCACATGTTCAA+TGG	0.451446	1.2:+60647512	None:intergenic
CCTGTTGTCATGTTCTTCCA+CGG	0.459630	1.2:-60647245	MS.gene91548:CDS
TATCCTTGCGCTTATGAAGA+TGG	0.468068	1.2:-60647101	MS.gene91548:CDS
GCATTGAAAGCATTGGACTC+TGG	0.474324	1.2:-60646963	MS.gene91548:CDS
TTTCTCGAGCAAGCCACGGT+TGG	0.476045	1.2:-60646627	MS.gene91548:CDS
TGGGTGGAAAGCTGTTAAAT+GGG	0.477103	1.2:-60647081	MS.gene91548:CDS
CTACATGGTTGGTGATAGCT+CGG	0.486021	1.2:-60647009	MS.gene91548:CDS
TTGTAATGCTGTTGTCGTCT+CGG	0.487442	1.2:-60647153	MS.gene91548:CDS
CTTTCTTCCCCGCCAAACAA+AGG	0.487810	1.2:+60646909	None:intergenic
CTGCTAAACCCTTTGTTTGG+CGG	0.491910	1.2:-60646918	MS.gene91548:CDS
GTAGATTCGAGTAAGGAGAT+TGG	0.497470	1.2:+60647340	None:intergenic
TGGAACTTTCAACCGTGACT+TGG	0.499887	1.2:-60647447	MS.gene91548:CDS
CCGTGGAAGAACATGACAAC+AGG	0.502089	1.2:+60647245	None:intergenic
GCCAAAGGACTTGAGAAAGC+TGG	0.509171	1.2:-60646669	MS.gene91548:CDS
TTTCTTCCCCGCCAAACAAA+GGG	0.509175	1.2:+60646910	None:intergenic
TGCCTTTCCTAAGAGTCTTG+TGG	0.514282	1.2:-60646736	MS.gene91548:CDS
AATCTTCTCCGTCGTCCTGA+TGG	0.518337	1.2:-60647467	MS.gene91548:CDS
CAAAAGGTCGAAGCCTTGAT+GGG	0.521272	1.2:-60646761	MS.gene91548:CDS
TAGATAAAATTTGATGCAGA+TGG	0.524069	1.2:-60647540	None:intergenic
TGATACATTGTGTCGTCGAT+TGG	0.529626	1.2:-60647183	MS.gene91548:CDS
CCATGTTGCATTGAAAGCAT+TGG	0.529699	1.2:-60646970	MS.gene91548:CDS
AATGGGTTAACTCTAGAACT+TGG	0.530294	1.2:-60647064	MS.gene91548:CDS
TCGAATCTACCGTCCTGTTG+AGG	0.542489	1.2:-60647327	MS.gene91548:CDS
TCACGGTTGAAAGTTCCATC+AGG	0.545176	1.2:+60647452	None:intergenic
ACTTGGCAGAGTTTCTTGAT+CGG	0.546431	1.2:-60647430	MS.gene91548:CDS
ATCCTTGCGCTTATGAAGAT+GGG	0.546497	1.2:-60647100	MS.gene91548:CDS
AATCCGAAAAGCGTCTTGAT+GGG	0.557814	1.2:-60646881	MS.gene91548:CDS
TCAGAGTGAAAGATAGAGAC+TGG	0.557918	1.2:-60646848	MS.gene91548:CDS
AGCAGTATATTTCCCAACAC+CGG	0.572967	1.2:+60646936	None:intergenic
CAGGACGGTAGATTCGAGTA+AGG	0.573555	1.2:+60647333	None:intergenic
TAGGAAAGGCAACCCCATCA+AGG	0.574933	1.2:+60646748	None:intergenic
CACCCATCTTCATAAGCGCA+AGG	0.575641	1.2:+60647098	None:intergenic
AAGGTTCATATCTACATGGT+TGG	0.580511	1.2:-60647020	MS.gene91548:CDS
ATAAAATTTGATGCAGATGG+TGG	0.580628	1.2:-60647537	None:intergenic
TGAGCATTTCTCTGTTGTCA+TGG	0.580679	1.2:-60646583	MS.gene91548:CDS
CTTTCCTAAGAGTCTTGTGG+TGG	0.585467	1.2:-60646733	MS.gene91548:CDS
ATGGTTGGTGATAGCTCGGG+CGG	0.594503	1.2:-60647005	MS.gene91548:CDS
TACATGGTTGGTGATAGCTC+GGG	0.594607	1.2:-60647008	MS.gene91548:CDS
ACATTGTGTCGTCGATTGGT+TGG	0.596982	1.2:-60647179	MS.gene91548:CDS
CAGCAGTAACAGGCTTCTCA+AGG	0.598120	1.2:+60647276	None:intergenic
TGGTGGTTCCATTGAACATG+TGG	0.598890	1.2:-60647520	MS.gene91548:CDS
TGAGAAGCCTGTTACTGCTG+AGG	0.600623	1.2:-60647273	MS.gene91548:CDS
GCTATTTCTCGAGCAAGCCA+CGG	0.605537	1.2:-60646631	MS.gene91548:CDS
GCTAAACCCTTTGTTTGGCG+GGG	0.608927	1.2:-60646916	MS.gene91548:CDS
AAAGAGAAAACACCATCCAC+AGG	0.610297	1.2:+60647386	None:intergenic
CAAGAAACTCTGCCAAGTCA+CGG	0.617005	1.2:+60647435	None:intergenic
TGAAAGTTCCATCAGGACGA+CGG	0.623383	1.2:+60647459	None:intergenic
TAGCAAGGTTCATATCTACA+TGG	0.626488	1.2:-60647024	MS.gene91548:CDS
GTTCTTCTCCCTCAACAGGA+CGG	0.631361	1.2:+60647318	None:intergenic
TGGCAATTGGGATATGCCAA+AGG	0.633591	1.2:-60646684	MS.gene91548:CDS
CTTGCGCTTATGAAGATGGG+TGG	0.634175	1.2:-60647097	MS.gene91548:CDS
TCCAGCAAATGCGAATCCTG+TGG	0.635598	1.2:-60647402	MS.gene91548:CDS
CACCACAAGACTCTTAGGAA+AGG	0.635838	1.2:+60646734	None:intergenic
CCAATGCTTTCAATGCAACA+TGG	0.638442	1.2:+60646970	None:intergenic
GGTGGTTCCATTGAACATGT+GGG	0.653078	1.2:-60647519	MS.gene91548:CDS
AAAAGGTCGAAGCCTTGATG+GGG	0.659766	1.2:-60646760	MS.gene91548:CDS
TGGTTGGTGATAGCTCGGGC+GGG	0.665839	1.2:-60647004	MS.gene91548:CDS
GTTGTCATGTTCTTCCACGG+TGG	0.676583	1.2:-60647242	MS.gene91548:CDS
GCAAATGCGAATCCTGTGGA+TGG	0.677631	1.2:-60647398	MS.gene91548:CDS
TAGCAAGTAAAACCCAACCG+TGG	0.774514	1.2:+60646614	None:intergenic
AATGTGCAAAACTTCCACCG+TGG	0.777602	1.2:+60647228	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATTGTATGCTAACTTGAAAT+TGG	+	chr1.2:60646588-60646607	None:intergenic	25.0%
!!	CTTTTGATGTTATTGTTGAT+CGG	-	chr1.2:60646705-60646724	MS.gene91548:CDS	25.0%
!!	TTTTGATGTTATTGTTGATC+GGG	-	chr1.2:60646706-60646725	MS.gene91548:CDS	25.0%
	ACAGAGAAATGCTCATTATT+TGG	+	chr1.2:60647484-60647503	None:intergenic	30.0%
	AAGGTTCATATCTACATGGT+TGG	-	chr1.2:60647052-60647071	MS.gene91548:CDS	35.0%
	ATACTGCTAAACCCTTTGTT+TGG	-	chr1.2:60647151-60647170	MS.gene91548:CDS	35.0%
	ATCAAAACCCACATGTTCAA+TGG	+	chr1.2:60646563-60646582	None:intergenic	35.0%
	GCAGAGTAAAAAAGATAGCA+AGG	-	chr1.2:60647033-60647052	MS.gene91548:CDS	35.0%
	TAGCAAGGTTCATATCTACA+TGG	-	chr1.2:60647048-60647067	MS.gene91548:CDS	35.0%
	TGAAAGATAGAGACTGGTAT+TGG	-	chr1.2:60647230-60647249	MS.gene91548:CDS	35.0%
!	TGGAAGTTTTGCACATTCTT+CGG	-	chr1.2:60646850-60646869	MS.gene91548:CDS	35.0%
!!	AATGGGTTAACTCTAGAACT+TGG	-	chr1.2:60647008-60647027	MS.gene91548:CDS	35.0%
	AAAGAGAAAACACCATCCAC+AGG	+	chr1.2:60646689-60646708	None:intergenic	40.0%
	ACTTGGCAGAGTTTCTTGAT+CGG	-	chr1.2:60646642-60646661	MS.gene91548:CDS	40.0%
	AGCAGTATATTTCCCAACAC+CGG	+	chr1.2:60647139-60647158	None:intergenic	40.0%
	ATCCTTGCGCTTATGAAGAT+GGG	-	chr1.2:60646972-60646991	MS.gene91548:CDS	40.0%
	ATGGGTGGAAAGCTGTTAAA+TGG	-	chr1.2:60646990-60647009	MS.gene91548:CDS	40.0%
	CCAATGCTTTCAATGCAACA+TGG	+	chr1.2:60647105-60647124	None:intergenic	40.0%
	GTAGATTCGAGTAAGGAGAT+TGG	+	chr1.2:60646735-60646754	None:intergenic	40.0%
	GTTTGGATCTTGTTCAGGAT+TGG	-	chr1.2:60647368-60647387	MS.gene91548:CDS	40.0%
	TATCCTTGCGCTTATGAAGA+TGG	-	chr1.2:60646971-60646990	MS.gene91548:CDS	40.0%
	TCAGAGTGAAAGATAGAGAC+TGG	-	chr1.2:60647224-60647243	MS.gene91548:CDS	40.0%
	TGAGCATTTCTCTGTTGTCA+TGG	-	chr1.2:60647489-60647508	MS.gene91548:CDS	40.0%
	TGATACATTGTGTCGTCGAT+TGG	-	chr1.2:60646889-60646908	MS.gene91548:CDS	40.0%
	TGGGTGGAAAGCTGTTAAAT+GGG	-	chr1.2:60646991-60647010	MS.gene91548:CDS	40.0%
	TTGTAATGCTGTTGTCGTCT+CGG	-	chr1.2:60646919-60646938	MS.gene91548:CDS	40.0%
	TTGTCGTCTCGGTGAATTAT+AGG	-	chr1.2:60646930-60646949	MS.gene91548:CDS	40.0%
!	CCATGTTGCATTGAAAGCAT+TGG	-	chr1.2:60647102-60647121	MS.gene91548:CDS	40.0%
!	CTTGTTCAGGATTGGCAATT+GGG	-	chr1.2:60647376-60647395	MS.gene91548:CDS	40.0%
!	TCTTGTTCAGGATTGGCAAT+TGG	-	chr1.2:60647375-60647394	MS.gene91548:CDS	40.0%
!	TGTAACCCTTTTGGTCCAAA+AGG	-	chr1.2:60647295-60647314	MS.gene91548:CDS	40.0%
!	TTCGACCTTTTGGACCAAAA+GGG	+	chr1.2:60647303-60647322	None:intergenic	40.0%
!!	AATCCGAAAAGCGTCTTGAT+GGG	-	chr1.2:60647191-60647210	MS.gene91548:CDS	40.0%
!!	CATTGAAAGCATTGGACTCT+GGG	-	chr1.2:60647110-60647129	MS.gene91548:CDS	40.0%
	AAAAGGTCGAAGCCTTGATG+GGG	-	chr1.2:60647312-60647331	MS.gene91548:CDS	45.0%
	AATGTGCAAAACTTCCACCG+TGG	+	chr1.2:60646847-60646866	None:intergenic	45.0%
	CAAAAGGTCGAAGCCTTGAT+GGG	-	chr1.2:60647311-60647330	MS.gene91548:CDS	45.0%
	CAAGAAACTCTGCCAAGTCA+CGG	+	chr1.2:60646640-60646659	None:intergenic	45.0%
	CACCACAAGACTCTTAGGAA+AGG	+	chr1.2:60647341-60647360	None:intergenic	45.0%
	CCTGTTGTCATGTTCTTCCA+CGG	-	chr1.2:60646827-60646846	MS.gene91548:CDS	45.0%
	GGTGGTTCCATTGAACATGT+GGG	-	chr1.2:60646553-60646572	MS.gene91548:CDS	45.0%
	TAGCAAGTAAAACCCAACCG+TGG	+	chr1.2:60647461-60647480	None:intergenic	45.0%
	TCACGGTTGAAAGTTCCATC+AGG	+	chr1.2:60646623-60646642	None:intergenic	45.0%
	TCCAGCTTTCTCAAGTCCTT+TGG	+	chr1.2:60647407-60647426	None:intergenic	45.0%
	TGAAAGTTCCATCAGGACGA+CGG	+	chr1.2:60646616-60646635	None:intergenic	45.0%
	TGCCTTTCCTAAGAGTCTTG+TGG	-	chr1.2:60647336-60647355	MS.gene91548:CDS	45.0%
	TGGAACTTTCAACCGTGACT+TGG	-	chr1.2:60646625-60646644	MS.gene91548:CDS	45.0%
	TGGCAATTGGGATATGCCAA+AGG	-	chr1.2:60647388-60647407	MS.gene91548:CDS	45.0%
	TGGTGGTTCCATTGAACATG+TGG	-	chr1.2:60646552-60646571	MS.gene91548:CDS	45.0%
	TGTTGTTCTTCTCCCTCAAC+AGG	+	chr1.2:60646761-60646780	None:intergenic	45.0%
	TTTCTTCCCCGCCAAACAAA+GGG	+	chr1.2:60647165-60647184	None:intergenic	45.0%
!	ACATTGTGTCGTCGATTGGT+TGG	-	chr1.2:60646893-60646912	MS.gene91548:CDS	45.0%
!	CTGCTAAACCCTTTGTTTGG+CGG	-	chr1.2:60647154-60647173	MS.gene91548:CDS	45.0%
!	CTTCGACCTTTTGGACCAAA+AGG	+	chr1.2:60647304-60647323	None:intergenic	45.0%
!	CTTTCCTAAGAGTCTTGTGG+TGG	-	chr1.2:60647339-60647358	MS.gene91548:CDS	45.0%
!	GAGAGCTTTTCTTCCTGAAG+GGG	-	chr1.2:60647252-60647271	MS.gene91548:CDS	45.0%
!	GCGCAAGGATACCTATTTTC+AGG	+	chr1.2:60646962-60646981	None:intergenic	45.0%
!	GGAGAGCTTTTCTTCCTGAA+GGG	-	chr1.2:60647251-60647270	MS.gene91548:CDS	45.0%
!	TCTCCCATCAAGACGCTTTT+CGG	+	chr1.2:60647197-60647216	None:intergenic	45.0%
!	TGCTAAACCCTTTGTTTGGC+GGG	-	chr1.2:60647155-60647174	MS.gene91548:CDS	45.0%
!	TGGAGAGCTTTTCTTCCTGA+AGG	-	chr1.2:60647250-60647269	MS.gene91548:CDS	45.0%
!!	CTACATGGTTGGTGATAGCT+CGG	-	chr1.2:60647063-60647082	MS.gene91548:CDS	45.0%
!!	GAATCCGAAAAGCGTCTTGA+TGG	-	chr1.2:60647190-60647209	MS.gene91548:CDS	45.0%
!!	GCATTGAAAGCATTGGACTC+TGG	-	chr1.2:60647109-60647128	MS.gene91548:CDS	45.0%
!!	TACATGGTTGGTGATAGCTC+GGG	-	chr1.2:60647064-60647083	MS.gene91548:CDS	45.0%
!!	TGCTGGTTTGGATCTTGTTC+AGG	-	chr1.2:60647363-60647382	MS.gene91548:CDS	45.0%
	AATCTTCTCCGTCGTCCTGA+TGG	-	chr1.2:60646605-60646624	MS.gene91548:CDS	50.0%
	ATAGGCGTGCGCCTGAAAAT+AGG	-	chr1.2:60646948-60646967	MS.gene91548:CDS	50.0%
	CACCCATCTTCATAAGCGCA+AGG	+	chr1.2:60646977-60646996	None:intergenic	50.0%
	CAGCAGTAACAGGCTTCTCA+AGG	+	chr1.2:60646799-60646818	None:intergenic	50.0%
	CAGGACGGTAGATTCGAGTA+AGG	+	chr1.2:60646742-60646761	None:intergenic	50.0%
	CCAAAAGGTCGAAGCCTTGA+TGG	-	chr1.2:60647310-60647329	MS.gene91548:CDS	50.0%
	CCGTGGAAGAACATGACAAC+AGG	+	chr1.2:60646830-60646849	None:intergenic	50.0%
	CGAATCTACCGTCCTGTTGA+GGG	-	chr1.2:60646746-60646765	MS.gene91548:CDS	50.0%
	CTTGCGCTTATGAAGATGGG+TGG	-	chr1.2:60646975-60646994	MS.gene91548:CDS	50.0%
	CTTTCTTCCCCGCCAAACAA+AGG	+	chr1.2:60647166-60647185	None:intergenic	50.0%
	GCAAATGCGAATCCTGTGGA+TGG	-	chr1.2:60646674-60646693	MS.gene91548:CDS	50.0%
	GCAACCACCACAAGACTCTT+AGG	+	chr1.2:60647346-60647365	None:intergenic	50.0%
	GCCAAAGGACTTGAGAAAGC+TGG	-	chr1.2:60647403-60647422	MS.gene91548:CDS	50.0%
	GGAAGAACCTCAGCAGTAAC+AGG	+	chr1.2:60646809-60646828	None:intergenic	50.0%
	GTTCTTCTCCCTCAACAGGA+CGG	+	chr1.2:60646757-60646776	None:intergenic	50.0%
	GTTGTCATGTTCTTCCACGG+TGG	-	chr1.2:60646830-60646849	MS.gene91548:CDS	50.0%
	TAGGAAAGGCAACCCCATCA+AGG	+	chr1.2:60647327-60647346	None:intergenic	50.0%
	TCCACAGGATTCGCATTTGC+TGG	+	chr1.2:60646674-60646693	None:intergenic	50.0%
	TCCAGCAAATGCGAATCCTG+TGG	-	chr1.2:60646670-60646689	MS.gene91548:CDS	50.0%
	TCGAATCTACCGTCCTGTTG+AGG	-	chr1.2:60646745-60646764	MS.gene91548:CDS	50.0%
	TGAGAAGCCTGTTACTGCTG+AGG	-	chr1.2:60646799-60646818	MS.gene91548:CDS	50.0%
	TGATCTCTGTCTTCCCCTTC+AGG	+	chr1.2:60647268-60647287	None:intergenic	50.0%
!	AAGAGTCTTGTGGTGGTTGC+TGG	-	chr1.2:60647346-60647365	MS.gene91548:CDS	50.0%
!	CATCACGCGTGTAACCCTTT+TGG	-	chr1.2:60647286-60647305	MS.gene91548:CDS	50.0%
!	CCATCAAGGCTTCGACCTTT+TGG	+	chr1.2:60647313-60647332	None:intergenic	50.0%
!	GCTAAACCCTTTGTTTGGCG+GGG	-	chr1.2:60647156-60647175	MS.gene91548:CDS	50.0%
!	TCTTGTGGTGGTTGCTGGTT+TGG	-	chr1.2:60647351-60647370	MS.gene91548:CDS	50.0%
!!	AGCATTGGACTCTGGGATTC+CGG	-	chr1.2:60647117-60647136	MS.gene91548:CDS	50.0%
!!	GCTATTTCTCGAGCAAGCCA+CGG	-	chr1.2:60647441-60647460	MS.gene91548:CDS	50.0%
	TTCTCGAGCAAGCCACGGTT+GGG	-	chr1.2:60647446-60647465	MS.gene91548:CDS	55.0%
	TTTCTCGAGCAAGCCACGGT+TGG	-	chr1.2:60647445-60647464	MS.gene91548:CDS	55.0%
!!	ATGGTTGGTGATAGCTCGGG+CGG	-	chr1.2:60647067-60647086	MS.gene91548:CDS	55.0%
!!	GACTCTGGGATTCCGGTGTT+GGG	-	chr1.2:60647124-60647143	MS.gene91548:CDS	55.0%
!!	GGACTCTGGGATTCCGGTGT+TGG	-	chr1.2:60647123-60647142	MS.gene91548:CDS	60.0%
!!	TGGTTGGTGATAGCTCGGGC+GGG	-	chr1.2:60647068-60647087	MS.gene91548:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	60646545	60647549	60646545	ID=MS.gene91548
chr1.2	mRNA	60646545	60647549	60646545	ID=MS.gene91548.t1;Parent=MS.gene91548
chr1.2	exon	60646545	60647549	60646545	ID=MS.gene91548.t1.exon1;Parent=MS.gene91548.t1
chr1.2	CDS	60646545	60647549	60646545	ID=cds.MS.gene91548.t1;Parent=MS.gene91548.t1

Gene Sequence

>MS.gene91548

ATGCAGATGGTGGTTCCATTGAACATGTGGGTTTTGATCTCCAATTTCAAGTTAGCATACAATCTTCTCCGTCGTCCTGATGGAACTTTCAACCGTGACTTGGCAGAGTTTCTTGATCGGAAAGTTCCAGCAAATGCGAATCCTGTGGATGGTGTTTTCTCTTTTGATGTTATTGTTGATCGGGAAACCAATCTCCTTACTCGAATCTACCGTCCTGTTGAGGGAGAAGAACAACATGTGAACATTGTTGACCTTGAGAAGCCTGTTACTGCTGAGGTTCTTCCTGTTGTCATGTTCTTCCACGGTGGAAGTTTTGCACATTCTTCGGCTAACAGTGCTATTTATGATACATTGTGTCGTCGATTGGTTGGTATTTGTAATGCTGTTGTCGTCTCGGTGAATTATAGGCGTGCGCCTGAAAATAGGTATCCTTGCGCTTATGAAGATGGGTGGAAAGCTGTTAAATGGGTTAACTCTAGAACTTGGCTGCAGAGTAAAAAAGATAGCAAGGTTCATATCTACATGGTTGGTGATAGCTCGGGCGGGAACATTGTGCACCATGTTGCATTGAAAGCATTGGACTCTGGGATTCCGGTGTTGGGAAATATACTGCTAAACCCTTTGTTTGGCGGGGAAGAAAGAACAGAATCCGAAAAGCGTCTTGATGGGAGATATTTTGTCAGAGTGAAAGATAGAGACTGGTATTGGAGAGCTTTTCTTCCTGAAGGGGAAGACAGAGATCATCACGCGTGTAACCCTTTTGGTCCAAAAGGTCGAAGCCTTGATGGGGTTGCCTTTCCTAAGAGTCTTGTGGTGGTTGCTGGTTTGGATCTTGTTCAGGATTGGCAATTGGGATATGCCAAAGGACTTGAGAAAGCTGGACAAAATGTGAAGTTGCTATTTCTCGAGCAAGCCACGGTTGGGTTTTACTTGCTACCAAATAATGAGCATTTCTCTGTTGTCATGGATGAGATAAAACATTTTGTCAACTCTGACTGTTCATAG

Protein sequence

>MS.gene91548.t1

MQMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVFSFDVIVDRETNLLTRIYRPVEGEEQHVNIVDLEKPVTAEVLPVVMFFHGGSFAHSSANSAIYDTLCRRLVGICNAVVVSVNYRRAPENRYPCAYEDGWKAVKWVNSRTWLQSKKDSKVHIYMVGDSSGGNIVHHVALKALDSGIPVLGNILLNPLFGGEERTESEKRLDGRYFVRVKDRDWYWRAFLPEGEDRDHHACNPFGPKGRSLDGVAFPKSLVVVAGLDLVQDWQLGYAKGLEKAGQNVKLLFLEQATVGFYLLPNNEHFSVVMDEIKHFVNSDCS