Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06555.t1 | XP_013461475.1 | 99.4 | 346 | 2 | 0 | 33 | 378 | 1 | 346 | 1.10E-189 | 672.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06555.t1 | A7RK30 | 40.5 | 336 | 182 | 7 | 35 | 367 | 41 | 361 | 4.1e-60 | 233.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06555.t1 | A0A072VBF3 | 99.4 | 346 | 2 | 0 | 33 | 378 | 1 | 346 | 8.0e-190 | 672.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06555 | MS.gene01763 | PPI |
| MS.gene047518 | MS.gene06555 | PPI |
| MS.gene06555 | MS.gene002381 | PPI |
| MS.gene01359 | MS.gene06555 | PPI |
| MS.gene01357 | MS.gene06555 | PPI |
| MS.gene002379 | MS.gene06555 | PPI |
| MS.gene01765 | MS.gene06555 | PPI |
| MS.gene047515 | MS.gene06555 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06555.t1 | MTR_3g093620 | 99.422 | 346 | 2 | 0 | 33 | 378 | 1 | 346 | 0.0 | 696 |
| MS.gene06555.t1 | MTR_2g012420 | 30.233 | 344 | 212 | 8 | 33 | 368 | 1 | 324 | 4.59e-34 | 129 |
| MS.gene06555.t1 | MTR_4g086410 | 31.190 | 311 | 183 | 9 | 76 | 370 | 328 | 623 | 6.24e-33 | 130 |
| MS.gene06555.t1 | MTR_4g050760 | 30.795 | 302 | 197 | 4 | 72 | 368 | 30 | 324 | 2.27e-31 | 121 |
| MS.gene06555.t1 | MTR_2g012380 | 30.795 | 302 | 197 | 4 | 72 | 368 | 30 | 324 | 2.27e-31 | 121 |
| MS.gene06555.t1 | MTR_4g086400 | 31.270 | 307 | 188 | 9 | 76 | 370 | 188 | 483 | 7.21e-31 | 123 |
| MS.gene06555.t1 | MTR_4g086400 | 31.270 | 307 | 188 | 9 | 76 | 370 | 328 | 623 | 1.22e-30 | 123 |
| MS.gene06555.t1 | MTR_2g012380 | 32.927 | 246 | 153 | 4 | 72 | 312 | 30 | 268 | 1.41e-28 | 112 |
| MS.gene06555.t1 | MTR_4g029500 | 30.100 | 299 | 201 | 5 | 72 | 368 | 81 | 373 | 1.62e-28 | 114 |
| MS.gene06555.t1 | MTR_8g064610 | 28.803 | 309 | 173 | 10 | 72 | 367 | 106 | 380 | 8.69e-24 | 101 |
| MS.gene06555.t1 | MTR_4g050710 | 28.745 | 247 | 172 | 2 | 123 | 368 | 4 | 247 | 6.78e-20 | 88.2 |
| MS.gene06555.t1 | MTR_2g012420 | 28.745 | 247 | 172 | 2 | 123 | 368 | 10 | 253 | 7.63e-20 | 88.2 |
| MS.gene06555.t1 | MTR_6g012170 | 28.213 | 319 | 179 | 11 | 62 | 367 | 35 | 316 | 6.61e-18 | 84.0 |
| MS.gene06555.t1 | MTR_6g012160 | 32.099 | 243 | 138 | 8 | 62 | 293 | 35 | 261 | 1.00e-17 | 83.2 |
| MS.gene06555.t1 | MTR_7g034395 | 29.012 | 324 | 176 | 11 | 60 | 367 | 28 | 313 | 4.87e-16 | 78.6 |
| MS.gene06555.t1 | MTR_7g406860 | 26.335 | 281 | 183 | 8 | 100 | 367 | 72 | 341 | 6.36e-16 | 78.6 |
| MS.gene06555.t1 | MTR_8g095220 | 25.301 | 249 | 168 | 8 | 124 | 367 | 187 | 422 | 2.49e-14 | 74.3 |
| MS.gene06555.t1 | MTR_2g012420 | 28.497 | 193 | 134 | 2 | 177 | 368 | 3 | 192 | 5.59e-14 | 70.5 |
| MS.gene06555.t1 | MTR_4g036310 | 33.149 | 181 | 107 | 5 | 62 | 232 | 29 | 205 | 8.72e-14 | 72.0 |
| MS.gene06555.t1 | MTR_2g095840 | 27.407 | 270 | 179 | 5 | 49 | 308 | 46 | 308 | 4.67e-13 | 70.1 |
| MS.gene06555.t1 | MTR_4g033205 | 30.601 | 183 | 109 | 6 | 62 | 232 | 29 | 205 | 3.53e-12 | 67.4 |
| MS.gene06555.t1 | MTR_4g032995 | 30.601 | 183 | 109 | 6 | 62 | 232 | 29 | 205 | 4.02e-12 | 67.0 |
| MS.gene06555.t1 | MTR_0001s0660 | 23.664 | 393 | 221 | 13 | 28 | 367 | 5 | 371 | 7.56e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06555.t1 | AT3G56460 | 77.101 | 345 | 78 | 1 | 33 | 376 | 1 | 345 | 0.0 | 523 |
| MS.gene06555.t1 | AT1G49670 | 31.429 | 315 | 187 | 9 | 76 | 375 | 328 | 628 | 3.07e-31 | 125 |
| MS.gene06555.t1 | AT1G49670 | 30.088 | 339 | 183 | 12 | 76 | 375 | 328 | 651 | 3.13e-29 | 119 |
| MS.gene06555.t1 | AT4G21580 | 29.630 | 297 | 205 | 2 | 72 | 367 | 30 | 323 | 2.57e-28 | 113 |
| MS.gene06555.t1 | AT5G61510 | 29.431 | 299 | 203 | 5 | 72 | 368 | 56 | 348 | 1.55e-25 | 106 |
| MS.gene06555.t1 | AT4G21580 | 29.195 | 298 | 199 | 5 | 72 | 367 | 30 | 317 | 2.82e-25 | 104 |
| MS.gene06555.t1 | AT5G61510 | 30.000 | 300 | 200 | 6 | 72 | 368 | 113 | 405 | 3.74e-25 | 105 |
| MS.gene06555.t1 | AT4G21580 | 28.328 | 293 | 206 | 2 | 76 | 367 | 1 | 290 | 1.12e-24 | 102 |
| MS.gene06555.t1 | AT1G23740 | 26.852 | 324 | 189 | 11 | 57 | 367 | 94 | 382 | 2.32e-23 | 100 |
| MS.gene06555.t1 | AT3G15090 | 27.353 | 340 | 199 | 13 | 57 | 369 | 48 | 366 | 2.25e-17 | 83.2 |
| MS.gene06555.t1 | AT3G45770 | 25.325 | 308 | 215 | 8 | 13 | 312 | 17 | 317 | 9.22e-14 | 72.4 |
| MS.gene06555.t1 | AT4G13010 | 35.359 | 181 | 105 | 6 | 62 | 232 | 27 | 205 | 9.84e-14 | 72.0 |
| MS.gene06555.t1 | AT5G63620 | 25.000 | 236 | 164 | 5 | 132 | 364 | 196 | 421 | 1.26e-12 | 69.3 |
| MS.gene06555.t1 | AT5G63620 | 25.000 | 236 | 164 | 5 | 132 | 364 | 196 | 421 | 3.67e-12 | 67.8 |
Find 103 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGCGAACATTCTAATAAT+TGG | 0.169619 | 3.2:-78555590 | MS.gene06555:CDS |
| GCTAATTACTTGCAGATTCT+TGG | 0.190783 | 3.2:-78557031 | MS.gene06555:CDS |
| TGATTCTTGGATATGATTAT+TGG | 0.197695 | 3.2:+78557121 | None:intergenic |
| CTTAAGGTCAAAAGGCTTAA+AGG | 0.221379 | 3.2:-78555680 | MS.gene06555:CDS |
| GGACAGTACATGGACTTTAT+TGG | 0.229971 | 3.2:-78553807 | MS.gene06555:CDS |
| GACAGTACATGGACTTTATT+GGG | 0.241684 | 3.2:-78553806 | MS.gene06555:CDS |
| CCTCCTTTGCCATTCATTCC+TGG | 0.241695 | 3.2:-78556992 | MS.gene06555:CDS |
| GTTTGTTCCTTTGCTGCTCT+TGG | 0.265097 | 3.2:-78556902 | MS.gene06555:CDS |
| GGAGCACTTGCTGTGGCATT+TGG | 0.265900 | 3.2:-78556563 | MS.gene06555:CDS |
| TTCATGAGCTTGCCTCCTAC+TGG | 0.267191 | 3.2:+78555638 | None:intergenic |
| AGGATCACCAACACGGAAAT+TGG | 0.272120 | 3.2:+78556925 | None:intergenic |
| GAGTACTTCCTTACCTTATA+TGG | 0.275893 | 3.2:-78557278 | MS.gene06555:CDS |
| TTTGTAGGTATTGCTAGTTT+TGG | 0.301867 | 3.2:-78556396 | MS.gene06555:intron |
| GATTCTTGGATATGATTATT+GGG | 0.311570 | 3.2:+78557122 | None:intergenic |
| TGTTGATCATGTGGTGGACT+TGG | 0.319846 | 3.2:-78555738 | MS.gene06555:CDS |
| AATCTTTGCGGCTTCTGAAA+TGG | 0.328075 | 3.2:-78555613 | MS.gene06555:CDS |
| TTAAGGTCAAAAGGCTTAAA+GGG | 0.333113 | 3.2:-78555679 | MS.gene06555:CDS |
| CTCCTACATCGGTTAGAGTT+AGG | 0.333628 | 3.2:-78557078 | MS.gene06555:CDS |
| GAACAAAACGTGCGTTGAAA+TGG | 0.339912 | 3.2:-78557203 | MS.gene06555:CDS |
| ATCTTTGCGGCTTCTGAAAT+GGG | 0.343716 | 3.2:-78555612 | MS.gene06555:CDS |
| GGTTGTGATTTGGTTGCTGC+TGG | 0.359205 | 3.2:-78556584 | MS.gene06555:CDS |
| TTGAGGGATAGGGTGATTCT+TGG | 0.360038 | 3.2:+78557108 | None:intergenic |
| CGTCTTCAACGCTCACCGTT+GGG | 0.366387 | 3.2:+78557152 | None:intergenic |
| TTCCTTACCTTATATGGTTG+TGG | 0.368077 | 3.2:-78557272 | MS.gene06555:CDS |
| ATCAGAGATAGGAAAGCTAT+AGG | 0.384250 | 3.2:-78552919 | MS.gene06555:CDS |
| GAGCGAACATTCTAATAATT+GGG | 0.396914 | 3.2:-78555589 | MS.gene06555:CDS |
| GGTCTTGCAGCTGTGCAAAT+TGG | 0.397069 | 3.2:-78556356 | MS.gene06555:CDS |
| GAATCACCCTATCCCTCAAT+TGG | 0.401681 | 3.2:-78557104 | MS.gene06555:CDS |
| CCTTCACTGCCATCAGAGAT+AGG | 0.409182 | 3.2:-78552930 | MS.gene06555:CDS |
| AATTTGTAGGTTTCGCGTGC+CGG | 0.416854 | 3.2:-78556609 | MS.gene06555:intron |
| CATAGAGCTCAGTTGAAATC+TGG | 0.418835 | 3.2:-78556518 | MS.gene06555:CDS |
| CGTGCCGGAGGGTTGTGATT+TGG | 0.423686 | 3.2:-78556594 | MS.gene06555:CDS |
| GTTCACATTTCTCATTCTTA+CGG | 0.428188 | 3.2:-78553700 | MS.gene06555:CDS |
| AGAGAATCTTCAAGAACAGC+TGG | 0.435112 | 3.2:+78553763 | None:intergenic |
| TCGTCTTCAACGCTCACCGT+TGG | 0.443222 | 3.2:+78557151 | None:intergenic |
| TCAATTGGATTCTCCTACAT+CGG | 0.456528 | 3.2:-78557089 | MS.gene06555:CDS |
| GGAGAATCCAATTGAGGGAT+AGG | 0.460120 | 3.2:+78557097 | None:intergenic |
| TTGGGTGCAGCAGGAGGTGT+GGG | 0.460493 | 3.2:-78556377 | MS.gene06555:CDS |
| AAGAGTTCCTTAAGGTCAAA+AGG | 0.464102 | 3.2:-78555688 | MS.gene06555:CDS |
| TCAGGCATCGTTGATTCCGT+TGG | 0.466758 | 3.2:-78556959 | MS.gene06555:CDS |
| GGTGCAGCTCTTGAAATCAA+TGG | 0.469140 | 3.2:-78555762 | MS.gene06555:CDS |
| CTACTGTCTTGGTTGGCAAA+AGG | 0.470601 | 3.2:-78553733 | MS.gene06555:CDS |
| TCAGAGATAGGAAAGCTATA+GGG | 0.473276 | 3.2:-78552918 | MS.gene06555:CDS |
| TTAACAAGAGCTATGTTAGC+AGG | 0.478741 | 3.2:+78555539 | None:intergenic |
| TCATGAGCTTGCCTCCTACT+GGG | 0.478839 | 3.2:+78555639 | None:intergenic |
| GCTATGTTAGCAGGGATGAC+AGG | 0.479328 | 3.2:+78555548 | None:intergenic |
| GTTTCATTACATAGCAGAAT+CGG | 0.485408 | 3.2:-78557233 | MS.gene06555:CDS |
| GTGCAGCTCTTGAAATCAAT+GGG | 0.486437 | 3.2:-78555761 | MS.gene06555:CDS |
| AGCTCAGTTGAAATCTGGTC+AGG | 0.487489 | 3.2:-78556513 | MS.gene06555:intron |
| TGCCTCCTACTGGGTCATAC+AGG | 0.492735 | 3.2:+78555648 | None:intergenic |
| TGCTAACATAGCTCTTGTTA+AGG | 0.494266 | 3.2:-78555537 | MS.gene06555:intron |
| GATGGCAGTGAAGGCGAGGT+TGG | 0.495840 | 3.2:+78552939 | None:intergenic |
| CTCTCAAGGAGCTACTGTCT+TGG | 0.497731 | 3.2:-78553744 | MS.gene06555:CDS |
| GCATTTGGCACTTCACATGT+TGG | 0.508528 | 3.2:-78556548 | MS.gene06555:CDS |
| TGCTGCTGGAGCACTTGCTG+TGG | 0.510040 | 3.2:-78556570 | MS.gene06555:CDS |
| AAATCGGATCCAGGAATGAA+TGG | 0.510104 | 3.2:+78556983 | None:intergenic |
| GTTGATCATGTGGTGGACTT+GGG | 0.511415 | 3.2:-78555737 | MS.gene06555:CDS |
| TGGCAGAATTGGACAGTACA+TGG | 0.511468 | 3.2:-78553817 | MS.gene06555:intron |
| TTTGGGTGCAGCAGGAGGTG+TGG | 0.512176 | 3.2:-78556378 | MS.gene06555:CDS |
| AGAGCAGCAAAGGAACAAAC+AGG | 0.514377 | 3.2:+78556905 | None:intergenic |
| CTATTGTCATTGCTGTTGCT+AGG | 0.516037 | 3.2:-78556319 | MS.gene06555:intron |
| TGTAGGTTTCGCGTGCCGGA+GGG | 0.517884 | 3.2:-78556605 | MS.gene06555:intron |
| TTGTAGGTTTCGCGTGCCGG+AGG | 0.522078 | 3.2:-78556606 | MS.gene06555:intron |
| AACACGGAAATTGGTAACAT+TGG | 0.526095 | 3.2:+78556934 | None:intergenic |
| TATAGCTTTCCTATCTCTGA+TGG | 0.527406 | 3.2:+78552921 | None:intergenic |
| AGCCACAACCATATAAGGTA+AGG | 0.531362 | 3.2:+78557270 | None:intergenic |
| AATGTTACCAATTTCCGTGT+TGG | 0.534038 | 3.2:-78556932 | MS.gene06555:CDS |
| ATCCTAACTCTAACCGATGT+AGG | 0.537658 | 3.2:+78557076 | None:intergenic |
| ATGTAGGAGAATCCAATTGA+GGG | 0.540400 | 3.2:+78557092 | None:intergenic |
| CTAATAATTGGGTTTGCAAG+TGG | 0.543319 | 3.2:-78555578 | MS.gene06555:CDS |
| AGCTCATGAAAGAATCTTTG+CGG | 0.548659 | 3.2:-78555625 | MS.gene06555:CDS |
| ATTAGCGAAATTCAAGCTTG+TGG | 0.550287 | 3.2:+78557048 | None:intergenic |
| ATAAGATCCAAGAGCAGCAA+AGG | 0.551039 | 3.2:+78556895 | None:intergenic |
| CCTATCTCTGATGGCAGTGA+AGG | 0.555242 | 3.2:+78552930 | None:intergenic |
| CTCTGATGGCAGTGAAGGCG+AGG | 0.567574 | 3.2:+78552935 | None:intergenic |
| CAAGGAGCTACTGTCTTGGT+TGG | 0.572684 | 3.2:-78553740 | MS.gene06555:CDS |
| CCAGGAATGAATGGCAAAGG+AGG | 0.572824 | 3.2:+78556992 | None:intergenic |
| TGTTCTTGAAGATTCTCTCA+AGG | 0.573910 | 3.2:-78553758 | MS.gene06555:CDS |
| ATTGGTAACATTGGAACCAA+CGG | 0.576019 | 3.2:+78556943 | None:intergenic |
| GAGTGTGAAAGAGTTCCTTA+AGG | 0.578196 | 3.2:-78555696 | MS.gene06555:CDS |
| GCAGATTCTTGGAAAGTACC+AGG | 0.581141 | 3.2:-78557020 | MS.gene06555:CDS |
| ATGGCAAAGGAGGTTTCTCC+TGG | 0.585688 | 3.2:+78557002 | None:intergenic |
| TGCAAATTGGAAAAGCATGT+GGG | 0.585981 | 3.2:-78556343 | MS.gene06555:CDS |
| TCATTCTTACGGCCTGTCAG+AGG | 0.586401 | 3.2:-78553689 | MS.gene06555:intron |
| GAGAATCCAATTGAGGGATA+GGG | 0.603597 | 3.2:+78557098 | None:intergenic |
| TCTTTGCGGCTTCTGAAATG+GGG | 0.609441 | 3.2:-78555611 | MS.gene06555:CDS |
| GATCCAGGAATGAATGGCAA+AGG | 0.612870 | 3.2:+78556989 | None:intergenic |
| TAACAAGAGCTATGTTAGCA+GGG | 0.614061 | 3.2:+78555540 | None:intergenic |
| GCAACCAAATCACAACCCTC+CGG | 0.621624 | 3.2:+78556590 | None:intergenic |
| CAGAAAATTGGGTGACCCAA+CGG | 0.628219 | 3.2:-78557167 | MS.gene06555:CDS |
| ATCAATGGGTGTTGATCATG+TGG | 0.629567 | 3.2:-78555747 | MS.gene06555:CDS |
| AACAAACAGGATCACCAACA+CGG | 0.633492 | 3.2:+78556918 | None:intergenic |
| GATGTAGGAGAATCCAATTG+AGG | 0.636037 | 3.2:+78557091 | None:intergenic |
| AGATAGGAAAGCTATAGGGA+AGG | 0.636916 | 3.2:-78552914 | MS.gene06555:CDS |
| GTCCTGTATGACCCAGTAGG+AGG | 0.637191 | 3.2:-78555650 | MS.gene06555:CDS |
| GTGCAAATTGGAAAAGCATG+TGG | 0.641885 | 3.2:-78556344 | MS.gene06555:CDS |
| GATGTCCTGTATGACCCAGT+AGG | 0.653197 | 3.2:-78555653 | MS.gene06555:CDS |
| GAGAATCTTCAAGAACAGCT+GGG | 0.655056 | 3.2:+78553764 | None:intergenic |
| TATGTAATGAAACTGTGCAA+CGG | 0.682933 | 3.2:+78557243 | None:intergenic |
| AATGGGTGTTGATCATGTGG+TGG | 0.686665 | 3.2:-78555744 | MS.gene06555:CDS |
| ACAGTACATGGACTTTATTG+GGG | 0.692527 | 3.2:-78553805 | MS.gene06555:CDS |
| GTAAGAATGAGAAATGTGAA+CGG | 0.692858 | 3.2:+78553702 | None:intergenic |
| GCAAATTGGAAAAGCATGTG+GGG | 0.732786 | 3.2:-78556342 | MS.gene06555:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTTAAACTAAAAAAAT+AGG | + | chr3.2:78557019-78557038 | None:intergenic | 10.0% |
| !! | AAATACACAAATTATTAGAA+CGG | + | chr3.2:78556508-78556527 | None:intergenic | 15.0% |
| !! | AACAAAAAATGACATATAAA+TGG | - | chr3.2:78555147-78555166 | MS.gene06555:intron | 15.0% |
| !! | ACAAAAAATGACATATAAAT+GGG | - | chr3.2:78555148-78555167 | MS.gene06555:intron | 15.0% |
| !! | TATAAATTCTTTGAATTTGT+AGG | - | chr3.2:78553528-78553547 | MS.gene06555:intron | 15.0% |
| !! | TATTTGGTATATAATGAAAA+AGG | - | chr3.2:78555618-78555637 | MS.gene06555:CDS | 15.0% |
| !! | TTATGTATGTAGTTTAAATT+AGG | + | chr3.2:78555931-78555950 | None:intergenic | 15.0% |
| !!! | AAATATTTTATGGATTATGT+TGG | - | chr3.2:78556976-78556995 | MS.gene06555:CDS | 15.0% |
| !!! | AATTTTGGTGAAATATTTTA+TGG | - | chr3.2:78556966-78556985 | MS.gene06555:CDS | 15.0% |
| !!! | TAAAGTTATAGTTGTTTTAT+GGG | - | chr3.2:78554115-78554134 | MS.gene06555:intron | 15.0% |
| !!! | TTACTGAATCTTTTTTTTTT+GGG | - | chr3.2:78556641-78556660 | MS.gene06555:intron | 15.0% |
| !!! | TTTACTGAATCTTTTTTTTT+TGG | - | chr3.2:78556640-78556659 | MS.gene06555:intron | 15.0% |
| !! | AAACAGAACAATATATACAT+TGG | + | chr3.2:78553699-78553718 | None:intergenic | 20.0% |
| !! | AAATAAATGCACAAATTGTA+TGG | + | chr3.2:78554982-78555001 | None:intergenic | 20.0% |
| !! | AAATAGATATGTACTAAACA+TGG | - | chr3.2:78555224-78555243 | MS.gene06555:intron | 20.0% |
| !! | AATAAATGCACAAATTGTAT+GGG | + | chr3.2:78554981-78555000 | None:intergenic | 20.0% |
| !! | AATTTGATATACTGTATACT+TGG | - | chr3.2:78557033-78557052 | MS.gene06555:CDS | 20.0% |
| !! | ACATTCTATGATAATCAATT+CGG | - | chr3.2:78554763-78554782 | MS.gene06555:intron | 20.0% |
| !! | ATAATCAATTCGGAATTAAT+TGG | - | chr3.2:78554773-78554792 | MS.gene06555:intron | 20.0% |
| !! | ATTTGATATACTGTATACTT+GGG | - | chr3.2:78557034-78557053 | MS.gene06555:CDS | 20.0% |
| !! | TAAAATTCAATGTACATTCA+AGG | - | chr3.2:78556540-78556559 | MS.gene06555:CDS | 20.0% |
| !! | TAATCAATTCGGAATTAATT+GGG | - | chr3.2:78554774-78554793 | MS.gene06555:intron | 20.0% |
| !! | TCATTATATACCAAATATGT+AGG | + | chr3.2:78555615-78555634 | None:intergenic | 20.0% |
| !! | TCCCATATAAATAAAAGAAA+AGG | - | chr3.2:78555864-78555883 | MS.gene06555:intron | 20.0% |
| !! | TTAATGTAAATATGCAATGT+GGG | + | chr3.2:78556073-78556092 | None:intergenic | 20.0% |
| !!! | AGCCTTTTCTTTTATTTATA+TGG | + | chr3.2:78555869-78555888 | None:intergenic | 20.0% |
| !!! | CTCGTTAGTTTTTAAAATTT+TGG | - | chr3.2:78556951-78556970 | MS.gene06555:CDS | 20.0% |
| !!! | GAGTATTTTAACAAACAAAA+AGG | + | chr3.2:78556313-78556332 | None:intergenic | 20.0% |
| !!! | GCCTTTTCTTTTATTTATAT+GGG | + | chr3.2:78555868-78555887 | None:intergenic | 20.0% |
| !!! | GTAAAGTTATAGTTGTTTTA+TGG | - | chr3.2:78554114-78554133 | MS.gene06555:intron | 20.0% |
| !!! | TTTTGTTTGTTAAAATACTC+TGG | - | chr3.2:78556313-78556332 | MS.gene06555:intron | 20.0% |
| ! | AAACAATTTCTTATTGTTGC+AGG | - | chr3.2:78557188-78557207 | MS.gene06555:CDS | 25.0% |
| ! | AAGACTACATTAGACAATAA+AGG | - | chr3.2:78555724-78555743 | MS.gene06555:CDS | 25.0% |
| ! | AGATACATAGCATAAAGTAA+CGG | + | chr3.2:78555470-78555489 | None:intergenic | 25.0% |
| ! | AGATACATTCACGTAAAAAT+GGG | - | chr3.2:78553437-78553456 | MS.gene06555:intron | 25.0% |
| ! | ATCAATGCTGAAAAATATAC+AGG | - | chr3.2:78555110-78555129 | MS.gene06555:intron | 25.0% |
| ! | CTTAATGTAAATATGCAATG+TGG | + | chr3.2:78556074-78556093 | None:intergenic | 25.0% |
| ! | GATTCTTGGATATGATTATT+GGG | + | chr3.2:78553031-78553050 | None:intergenic | 25.0% |
| ! | GTAGATATATATCACAACTT+TGG | + | chr3.2:78555587-78555606 | None:intergenic | 25.0% |
| ! | GTATATATTGTTCTGTTTGT+TGG | - | chr3.2:78553701-78553720 | MS.gene06555:CDS | 25.0% |
| ! | TAAAAACTAACGAGAATAGA+AGG | + | chr3.2:78556945-78556964 | None:intergenic | 25.0% |
| ! | TAGATACATTCACGTAAAAA+TGG | - | chr3.2:78553436-78553455 | MS.gene06555:intron | 25.0% |
| ! | TGATTCTTGGATATGATTAT+TGG | + | chr3.2:78553032-78553051 | None:intergenic | 25.0% |
| ! | TTAAAATTAGTGAGTGGTTA+GGG | - | chr3.2:78556774-78556793 | MS.gene06555:intron | 25.0% |
| ! | TTTACATTAAGAGAAATGCT+AGG | - | chr3.2:78556083-78556102 | MS.gene06555:intron | 25.0% |
| !! | AGTTCAATGTTCATTTTCTT+GGG | - | chr3.2:78556735-78556754 | MS.gene06555:intron | 25.0% |
| !! | GCTTAGCTAAAATGAATTTT+GGG | - | chr3.2:78554067-78554086 | MS.gene06555:intron | 25.0% |
| !! | TAGTTCAATGTTCATTTTCT+TGG | - | chr3.2:78556734-78556753 | MS.gene06555:intron | 25.0% |
| !! | TGTAACTGATGACATTATTT+TGG | + | chr3.2:78554934-78554953 | None:intergenic | 25.0% |
| !! | TTGTAGCTTCTTAATTTTCA+CGG | - | chr3.2:78553996-78554015 | MS.gene06555:intron | 25.0% |
| !!! | ACTTTTGTTTAAATACACAC+AGG | - | chr3.2:78554204-78554223 | MS.gene06555:intron | 25.0% |
| !!! | AGTTTTTTCAAGGTTAGTTA+GGG | + | chr3.2:78555354-78555373 | None:intergenic | 25.0% |
| !!! | CGTAAAAATGGGTTAAATAA+TGG | - | chr3.2:78553448-78553467 | MS.gene06555:intron | 25.0% |
| !!! | TAGTTTTTTCAAGGTTAGTT+AGG | + | chr3.2:78555355-78555374 | None:intergenic | 25.0% |
| AAATCGCTACAATACTCTAA+TGG | - | chr3.2:78555965-78555984 | MS.gene06555:intron | 30.0% | |
| AAATTAGGTTCCAAGATTCA+AGG | + | chr3.2:78555916-78555935 | None:intergenic | 30.0% | |
| AACTAAACTAGTGAGATCTT+TGG | - | chr3.2:78556010-78556029 | MS.gene06555:intron | 30.0% | |
| AAGAAACATACTGAATACCT+AGG | - | chr3.2:78555766-78555785 | MS.gene06555:CDS | 30.0% | |
| AATTCGGAATTAATTGGGAA+GGG | - | chr3.2:78554779-78554798 | MS.gene06555:intron | 30.0% | |
| ACTAAGAAATAACTGACCTA+TGG | - | chr3.2:78555554-78555573 | MS.gene06555:CDS | 30.0% | |
| AGGATTTAGTCATATGTATG+AGG | + | chr3.2:78555896-78555915 | None:intergenic | 30.0% | |
| ATGACTAAATCCTTGAATCT+TGG | - | chr3.2:78555903-78555922 | MS.gene06555:intron | 30.0% | |
| CAAACACACACTAAATAAAC+GGG | + | chr3.2:78553335-78553354 | None:intergenic | 30.0% | |
| CCAAACACACACTAAATAAA+CGG | + | chr3.2:78553336-78553355 | None:intergenic | 30.0% | |
| CTAAGAAATAACTGACCTAT+GGG | - | chr3.2:78555555-78555574 | MS.gene06555:CDS | 30.0% | |
| CTACTGTTGTAACTCTTTAA+AGG | - | chr3.2:78556591-78556610 | MS.gene06555:CDS | 30.0% | |
| CTTAACACTCATTCTCTTAT+TGG | + | chr3.2:78556213-78556232 | None:intergenic | 30.0% | |
| GAGCGAACATTCTAATAATT+GGG | - | chr3.2:78554561-78554580 | MS.gene06555:intron | 30.0% | |
| GCAAATCAACAATGACTAAA+AGG | + | chr3.2:78555016-78555035 | None:intergenic | 30.0% | |
| GTAAGAATGAGAAATGTGAA+CGG | + | chr3.2:78556451-78556470 | None:intergenic | 30.0% | |
| GTTAAAATTAGTGAGTGGTT+AGG | - | chr3.2:78556773-78556792 | MS.gene06555:intron | 30.0% | |
| GTTCACATTTCTCATTCTTA+CGG | - | chr3.2:78556450-78556469 | MS.gene06555:intron | 30.0% | |
| GTTTCATTACATAGCAGAAT+CGG | - | chr3.2:78552917-78552936 | MS.gene06555:CDS | 30.0% | |
| TATGTAATGAAACTGTGCAA+CGG | + | chr3.2:78552910-78552929 | None:intergenic | 30.0% | |
| TATTAGAACGGATAAGACAA+GGG | + | chr3.2:78556496-78556515 | None:intergenic | 30.0% | |
| TCATATTTACTAATGCCCAT+TGG | + | chr3.2:78556908-78556927 | None:intergenic | 30.0% | |
| TCTTAGTGATGAGATAGAAA+AGG | + | chr3.2:78555541-78555560 | None:intergenic | 30.0% | |
| TGATGAGAAATTGTCATATG+TGG | + | chr3.2:78554816-78554835 | None:intergenic | 30.0% | |
| TGTTATTATCTTGTCTTGCT+TGG | - | chr3.2:78554661-78554680 | MS.gene06555:intron | 30.0% | |
| TTAAAATACTCTGGCAGAAT+TGG | - | chr3.2:78556322-78556341 | MS.gene06555:CDS | 30.0% | |
| TTAAGGTCAAAAGGCTTAAA+GGG | - | chr3.2:78554471-78554490 | MS.gene06555:intron | 30.0% | |
| TTATTAGAACGGATAAGACA+AGG | + | chr3.2:78556497-78556516 | None:intergenic | 30.0% | |
| TTATTGGATGAAATCCATGT+AGG | + | chr3.2:78556197-78556216 | None:intergenic | 30.0% | |
| TTGTAGCGATTTAATCACAA+TGG | + | chr3.2:78555957-78555976 | None:intergenic | 30.0% | |
| TTTCAGCTTCACTATCTTAA+AGG | + | chr3.2:78555429-78555448 | None:intergenic | 30.0% | |
| ! | AAAGATCTCACTAGTTTAGT+TGG | + | chr3.2:78556011-78556030 | None:intergenic | 30.0% |
| ! | AAGATCTCACTAGTTTAGTT+GGG | + | chr3.2:78556010-78556029 | None:intergenic | 30.0% |
| ! | ATATTGTTCTGTTTGTTGGT+GGG | - | chr3.2:78553705-78553724 | MS.gene06555:CDS | 30.0% |
| ! | CGCTTAGCTAAAATGAATTT+TGG | - | chr3.2:78554066-78554085 | MS.gene06555:intron | 30.0% |
| ! | GTTCAATGTTCATTTTCTTG+GGG | - | chr3.2:78556736-78556755 | MS.gene06555:intron | 30.0% |
| ! | TATATTGTTCTGTTTGTTGG+TGG | - | chr3.2:78553704-78553723 | MS.gene06555:CDS | 30.0% |
| ! | TGAGGACTAGTATTATACAA+TGG | - | chr3.2:78557162-78557181 | MS.gene06555:CDS | 30.0% |
| ! | TGTTTCTTGTTTGCATAATC+TGG | - | chr3.2:78554347-78554366 | MS.gene06555:intron | 30.0% |
| ! | TTTTCACGGTATAATCACAT+CGG | - | chr3.2:78554010-78554029 | MS.gene06555:intron | 30.0% |
| !! | GGATTTTACATTGCTTTTCA+GGG | + | chr3.2:78555847-78555866 | None:intergenic | 30.0% |
| !! | GTTATAGTTGTTTTATGGGT+AGG | - | chr3.2:78554119-78554138 | MS.gene06555:intron | 30.0% |
| !! | TCGCATTTTAATCTCTAACT+TGG | - | chr3.2:78554299-78554318 | MS.gene06555:intron | 30.0% |
| !! | TTAGTGCTGACTTAACTAAT+AGG | - | chr3.2:78556697-78556716 | MS.gene06555:intron | 30.0% |
| !! | TTTGTAGGTATTGCTAGTTT+TGG | - | chr3.2:78553754-78553773 | MS.gene06555:CDS | 30.0% |
| !!! | GATGACATTATTTTGGAAGT+GGG | + | chr3.2:78554927-78554946 | None:intergenic | 30.0% |
| !!! | GTTTGCATAATCTGGTTTTA+GGG | - | chr3.2:78554355-78554374 | MS.gene06555:intron | 30.0% |
| !!! | TGATGACATTATTTTGGAAG+TGG | + | chr3.2:78554928-78554947 | None:intergenic | 30.0% |
| !!! | TGTTTGCATAATCTGGTTTT+AGG | - | chr3.2:78554354-78554373 | MS.gene06555:intron | 30.0% |
| !!! | TTGTAGGTATTGCTAGTTTT+GGG | - | chr3.2:78553755-78553774 | MS.gene06555:CDS | 30.0% |
| !!! | TTTGCATAATCTGGTTTTAG+GGG | - | chr3.2:78554356-78554375 | MS.gene06555:intron | 30.0% |
| AAAATGGATCCCACATAAAG+TGG | + | chr3.2:78556162-78556181 | None:intergenic | 35.0% | |
| AAACATACTGAATACCTAGG+TGG | - | chr3.2:78555769-78555788 | MS.gene06555:CDS | 35.0% | |
| AAATCTAGCAAACTGTGAAG+CGG | + | chr3.2:78555325-78555344 | None:intergenic | 35.0% | |
| AACATACTGAATACCTAGGT+GGG | - | chr3.2:78555770-78555789 | MS.gene06555:CDS | 35.0% | |
| AAGAGTTCCTTAAGGTCAAA+AGG | - | chr3.2:78554462-78554481 | MS.gene06555:intron | 35.0% | |
| AATGTTACCAATTTCCGTGT+TGG | - | chr3.2:78553218-78553237 | MS.gene06555:intron | 35.0% | |
| ACAGTACATGGACTTTATTG+GGG | - | chr3.2:78556345-78556364 | MS.gene06555:CDS | 35.0% | |
| ACCAGGTTAAAATTAGTGAG+TGG | - | chr3.2:78556768-78556787 | MS.gene06555:intron | 35.0% | |
| ACTTGGGTCATTATAACAGT+TGG | - | chr3.2:78557050-78557069 | MS.gene06555:CDS | 35.0% | |
| AGAAAAGGACTACATCATAC+TGG | + | chr3.2:78555526-78555545 | None:intergenic | 35.0% | |
| AGATCAAGCAACAAACAATC+AGG | + | chr3.2:78554705-78554724 | None:intergenic | 35.0% | |
| AGCTCATGAAAGAATCTTTG+CGG | - | chr3.2:78554525-78554544 | MS.gene06555:intron | 35.0% | |
| AGGCAAATGATACAAACTAC+TGG | + | chr3.2:78557121-78557140 | None:intergenic | 35.0% | |
| AGTAACGGTAGTATTTAAGC+AGG | + | chr3.2:78555455-78555474 | None:intergenic | 35.0% | |
| AGTATGTTTCTTAGATGTCG+TGG | + | chr3.2:78555758-78555777 | None:intergenic | 35.0% | |
| ATCAACGATGCCTGAAAAAT+CGG | + | chr3.2:78553186-78553205 | None:intergenic | 35.0% | |
| ATCAGAGATAGGAAAGCTAT+AGG | - | chr3.2:78557231-78557250 | MS.gene06555:CDS | 35.0% | |
| ATGTAGGAGAATCCAATTGA+GGG | + | chr3.2:78553061-78553080 | None:intergenic | 35.0% | |
| ATTAGCGAAATTCAAGCTTG+TGG | + | chr3.2:78553105-78553124 | None:intergenic | 35.0% | |
| ATTCGGAATTAATTGGGAAG+GGG | - | chr3.2:78554780-78554799 | MS.gene06555:intron | 35.0% | |
| CAAAAGCAACAGTCATGATA+TGG | + | chr3.2:78554881-78554900 | None:intergenic | 35.0% | |
| CAATTCGGAATTAATTGGGA+AGG | - | chr3.2:78554778-78554797 | MS.gene06555:intron | 35.0% | |
| CATGTTGCAATAATACATGC+AGG | + | chr3.2:78555382-78555401 | None:intergenic | 35.0% | |
| CCGTTTATTTAGTGTGTGTT+TGG | - | chr3.2:78553333-78553352 | MS.gene06555:intron | 35.0% | |
| CTAATAATTGGGTTTGCAAG+TGG | - | chr3.2:78554572-78554591 | MS.gene06555:intron | 35.0% | |
| CTTAAGGTCAAAAGGCTTAA+AGG | - | chr3.2:78554470-78554489 | MS.gene06555:intron | 35.0% | |
| GAAAAAGCCACAACCATATA+AGG | + | chr3.2:78552888-78552907 | None:intergenic | 35.0% | |
| GAACTAACATAAGAGAGCTT+TGG | + | chr3.2:78556257-78556276 | None:intergenic | 35.0% | |
| GACAGTACATGGACTTTATT+GGG | - | chr3.2:78556344-78556363 | MS.gene06555:CDS | 35.0% | |
| GAGTACTTCCTTACCTTATA+TGG | - | chr3.2:78552872-78552891 | MS.gene06555:CDS | 35.0% | |
| GCTAATTACTTGCAGATTCT+TGG | - | chr3.2:78553119-78553138 | MS.gene06555:intron | 35.0% | |
| GGAGCGAACATTCTAATAAT+TGG | - | chr3.2:78554560-78554579 | MS.gene06555:intron | 35.0% | |
| GGATAAATCAGCATGTTTAC+TGG | - | chr3.2:78556662-78556681 | MS.gene06555:intron | 35.0% | |
| TAAATATGCAATGTGGGCAA+GGG | + | chr3.2:78556067-78556086 | None:intergenic | 35.0% | |
| TAACAAGAGCTATGTTAGCA+GGG | + | chr3.2:78554613-78554632 | None:intergenic | 35.0% | |
| TAGGTCTCACACTTAGAAAA+TGG | + | chr3.2:78556178-78556197 | None:intergenic | 35.0% | |
| TAGTCCTCATTGAACATCAA+TGG | + | chr3.2:78557151-78557170 | None:intergenic | 35.0% | |
| TATAGCTTTCCTATCTCTGA+TGG | + | chr3.2:78557232-78557251 | None:intergenic | 35.0% | |
| TCAATTGGATTCTCCTACAT+CGG | - | chr3.2:78553061-78553080 | MS.gene06555:intron | 35.0% | |
| TCAGAGATAGGAAAGCTATA+GGG | - | chr3.2:78557232-78557251 | MS.gene06555:CDS | 35.0% | |
| TCTACACACACCTACATATT+TGG | - | chr3.2:78555602-78555621 | MS.gene06555:CDS | 35.0% | |
| TGAACATCAATGGAGCATAT+AGG | + | chr3.2:78557141-78557160 | None:intergenic | 35.0% | |
| TGCTAACATAGCTCTTGTTA+AGG | - | chr3.2:78554613-78554632 | MS.gene06555:intron | 35.0% | |
| TGTTCTTGAAGATTCTCTCA+AGG | - | chr3.2:78556392-78556411 | MS.gene06555:CDS | 35.0% | |
| TTAACAAGAGCTATGTTAGC+AGG | + | chr3.2:78554614-78554633 | None:intergenic | 35.0% | |
| TTATTGAGTGAATCCCATGT+GGG | - | chr3.2:78556131-78556150 | MS.gene06555:intron | 35.0% | |
| TTCCTTACCTTATATGGTTG+TGG | - | chr3.2:78552878-78552897 | MS.gene06555:CDS | 35.0% | |
| TTGTGACATCAATGACCAAT+GGG | - | chr3.2:78556890-78556909 | MS.gene06555:CDS | 35.0% | |
| ! | AACACGGAAATTGGTAACAT+TGG | + | chr3.2:78553219-78553238 | None:intergenic | 35.0% |
| ! | AGCACTTTTGTGCAGAAAAT+TGG | - | chr3.2:78552971-78552990 | MS.gene06555:intron | 35.0% |
| ! | ATTGGTAACATTGGAACCAA+CGG | + | chr3.2:78553210-78553229 | None:intergenic | 35.0% |
| ! | CATCATACTGGCATTTTGTT+TGG | + | chr3.2:78555514-78555533 | None:intergenic | 35.0% |
| ! | CTTTAAGCCTTTTGACCTTA+AGG | + | chr3.2:78554472-78554491 | None:intergenic | 35.0% |
| ! | GCACTTTTGTGCAGAAAATT+GGG | - | chr3.2:78552972-78552991 | MS.gene06555:intron | 35.0% |
| ! | GGTACATCAGGAATAGATTT+TGG | - | chr3.2:78554634-78554653 | MS.gene06555:intron | 35.0% |
| ! | TATTGTTCTGTTTGTTGGTG+GGG | - | chr3.2:78553706-78553725 | MS.gene06555:CDS | 35.0% |
| ! | TGCAAATTGGAAAAGCATGT+GGG | - | chr3.2:78553807-78553826 | MS.gene06555:CDS | 35.0% |
| ! | TTGGATCTGCAAACTTTTGT+TGG | - | chr3.2:78556029-78556048 | MS.gene06555:intron | 35.0% |
| !! | ACCACTCACTAATTTTAACC+TGG | + | chr3.2:78556772-78556791 | None:intergenic | 35.0% |
| !! | GGGATTTTACATTGCTTTTC+AGG | + | chr3.2:78555848-78555867 | None:intergenic | 35.0% |
| !! | TATGTTAGTTCTGCTATAGC+TGG | - | chr3.2:78556266-78556285 | MS.gene06555:intron | 35.0% |
| !!! | CATTGATTTTCACTTGACAG+TGG | + | chr3.2:78555097-78555116 | None:intergenic | 35.0% |
| !!! | CTGGGGAATTTTTAGTTATC+TGG | - | chr3.2:78555660-78555679 | MS.gene06555:CDS | 35.0% |
| !!! | CTTCACAGTTTGCTAGATTT+TGG | - | chr3.2:78555325-78555344 | MS.gene06555:intron | 35.0% |
| !!! | GGAATTTTTAGTTATCTGGC+TGG | - | chr3.2:78555664-78555683 | MS.gene06555:CDS | 35.0% |
| AAATCGGATCCAGGAATGAA+TGG | + | chr3.2:78553170-78553189 | None:intergenic | 40.0% | |
| AAATTAGTGAGTGGTTAGGG+TGG | - | chr3.2:78556777-78556796 | MS.gene06555:intron | 40.0% | |
| AACAAACAGGATCACCAACA+CGG | + | chr3.2:78553235-78553254 | None:intergenic | 40.0% | |
| AACATAGGCTAAGAAGCTCA+TGG | + | chr3.2:78553935-78553954 | None:intergenic | 40.0% | |
| AATTAGTGAGTGGTTAGGGT+GGG | - | chr3.2:78556778-78556797 | MS.gene06555:intron | 40.0% | |
| ACATAGGCTAAGAAGCTCAT+GGG | + | chr3.2:78553934-78553953 | None:intergenic | 40.0% | |
| ACTCAACTCCAACTTTCCAA+GGG | + | chr3.2:78554328-78554347 | None:intergenic | 40.0% | |
| AGAGAATCTTCAAGAACAGC+TGG | + | chr3.2:78556390-78556409 | None:intergenic | 40.0% | |
| AGATAGGAAAGCTATAGGGA+AGG | - | chr3.2:78557236-78557255 | MS.gene06555:CDS | 40.0% | |
| AGCCACAACCATATAAGGTA+AGG | + | chr3.2:78552883-78552902 | None:intergenic | 40.0% | |
| AGCTCTTGTTAAGGTACATC+AGG | - | chr3.2:78554622-78554641 | MS.gene06555:intron | 40.0% | |
| ATAAGATCCAAGAGCAGCAA+AGG | + | chr3.2:78553258-78553277 | None:intergenic | 40.0% | |
| ATCCTAACTCTAACCGATGT+AGG | + | chr3.2:78553077-78553096 | None:intergenic | 40.0% | |
| ATCTCTAACTTGGTATCCCT+TGG | - | chr3.2:78554309-78554328 | MS.gene06555:intron | 40.0% | |
| ATGCCATTATGCCTTTGAGT+TGG | - | chr3.2:78553883-78553902 | MS.gene06555:intron | 40.0% | |
| CACACTAAATAAACGGGAAG+AGG | + | chr3.2:78553329-78553348 | None:intergenic | 40.0% | |
| CATAGAGCTCAGTTGAAATC+TGG | - | chr3.2:78553632-78553651 | MS.gene06555:intron | 40.0% | |
| CCAAAATGAACCCAACTCAA+AGG | + | chr3.2:78553897-78553916 | None:intergenic | 40.0% | |
| CTTATTGAGTGAATCCCATG+TGG | - | chr3.2:78556130-78556149 | MS.gene06555:intron | 40.0% | |
| CTTGTGACATCAATGACCAA+TGG | - | chr3.2:78556889-78556908 | MS.gene06555:CDS | 40.0% | |
| GAACAAAACGTGCGTTGAAA+TGG | - | chr3.2:78552947-78552966 | MS.gene06555:intron | 40.0% | |
| GAGAATCCAATTGAGGGATA+GGG | + | chr3.2:78553055-78553074 | None:intergenic | 40.0% | |
| GAGAATCTTCAAGAACAGCT+GGG | + | chr3.2:78556389-78556408 | None:intergenic | 40.0% | |
| GAGTGTGAAAGAGTTCCTTA+AGG | - | chr3.2:78554454-78554473 | MS.gene06555:intron | 40.0% | |
| GATGTAGGAGAATCCAATTG+AGG | + | chr3.2:78553062-78553081 | None:intergenic | 40.0% | |
| GGACAGTACATGGACTTTAT+TGG | - | chr3.2:78556343-78556362 | MS.gene06555:CDS | 40.0% | |
| GTAAATATGCAATGTGGGCA+AGG | + | chr3.2:78556068-78556087 | None:intergenic | 40.0% | |
| GTGCAGCTCTTGAAATCAAT+GGG | - | chr3.2:78554389-78554408 | MS.gene06555:intron | 40.0% | |
| TGCTCCATTGATGTTCAATG+AGG | - | chr3.2:78557144-78557163 | MS.gene06555:CDS | 40.0% | |
| TGGGTTGTGGAATTGTTTGT+AGG | - | chr3.2:78553739-78553758 | MS.gene06555:CDS | 40.0% | |
| TTCTAAGTGTGAGACCTACA+TGG | - | chr3.2:78556180-78556199 | MS.gene06555:intron | 40.0% | |
| TTGGTGGGGTTAAGTTATGT+GGG | - | chr3.2:78553720-78553739 | MS.gene06555:CDS | 40.0% | |
| ! | AACCCAACTCAAAGGCATAA+TGG | + | chr3.2:78553889-78553908 | None:intergenic | 40.0% |
| ! | AATCTTTGCGGCTTCTGAAA+TGG | - | chr3.2:78554537-78554556 | MS.gene06555:intron | 40.0% |
| ! | ATAAACGGGAAGAGGAGTAT+CGG | + | chr3.2:78553321-78553340 | None:intergenic | 40.0% |
| ! | ATGGGAAGAGAATTTTGAGC+AGG | - | chr3.2:78555166-78555185 | MS.gene06555:intron | 40.0% |
| ! | ATTCCTGGATCCGATTTTTC+AGG | - | chr3.2:78553173-78553192 | MS.gene06555:intron | 40.0% |
| ! | CTATTGTCATTGCTGTTGCT+AGG | - | chr3.2:78553831-78553850 | MS.gene06555:intron | 40.0% |
| ! | GCAAATTGGAAAAGCATGTG+GGG | - | chr3.2:78553808-78553827 | MS.gene06555:CDS | 40.0% |
| ! | GTGCAAATTGGAAAAGCATG+TGG | - | chr3.2:78553806-78553825 | MS.gene06555:CDS | 40.0% |
| ! | TGCCATTATGCCTTTGAGTT+GGG | - | chr3.2:78553884-78553903 | MS.gene06555:intron | 40.0% |
| !! | ATCAATGGGTGTTGATCATG+TGG | - | chr3.2:78554403-78554422 | MS.gene06555:intron | 40.0% |
| !! | ATCTTTGCGGCTTCTGAAAT+GGG | - | chr3.2:78554538-78554557 | MS.gene06555:intron | 40.0% |
| !! | CAACTTTGGAATAGACCCAT+AGG | + | chr3.2:78555573-78555592 | None:intergenic | 40.0% |
| !! | CATTGTTGATTTGCTGACGA+GGG | - | chr3.2:78555022-78555041 | MS.gene06555:intron | 40.0% |
| !! | TAATTGGGAAGGGGTATCAA+GGG | - | chr3.2:78554789-78554808 | MS.gene06555:intron | 40.0% |
| !! | TCATTGTTGATTTGCTGACG+AGG | - | chr3.2:78555021-78555040 | MS.gene06555:intron | 40.0% |
| !! | TTAATTGGGAAGGGGTATCA+AGG | - | chr3.2:78554788-78554807 | MS.gene06555:intron | 40.0% |
| !! | TTAGTGTGTGTTTGGTTCTG+TGG | - | chr3.2:78553341-78553360 | MS.gene06555:intron | 40.0% |
| !!! | CCTTTGAGTTGGGTTCATTT+TGG | - | chr3.2:78553894-78553913 | MS.gene06555:intron | 40.0% |
| !!! | CTGGCATTTTGTTTGGCTTT+TGG | + | chr3.2:78555507-78555526 | None:intergenic | 40.0% |
| !!! | GCAGGCTGTTAGTTTTTTCA+AGG | + | chr3.2:78555364-78555383 | None:intergenic | 40.0% |
| !!! | TGACTGTTGCTTTTGCTGTT+CGG | - | chr3.2:78554886-78554905 | MS.gene06555:intron | 40.0% |
| AATTTGTAGGTTTCGCGTGC+CGG | - | chr3.2:78553541-78553560 | MS.gene06555:intron | 45.0% | |
| ACTGAATACCTAGGTGGGTA+AGG | - | chr3.2:78555775-78555794 | MS.gene06555:CDS | 45.0% | |
| AGAGCAGCAAAGGAACAAAC+AGG | + | chr3.2:78553248-78553267 | None:intergenic | 45.0% | |
| AGCAGTTGCTAAATGTGCTG+CGG | + | chr3.2:78553971-78553990 | None:intergenic | 45.0% | |
| AGCTCAGTTGAAATCTGGTC+AGG | - | chr3.2:78553637-78553656 | MS.gene06555:intron | 45.0% | |
| AGGATCACCAACACGGAAAT+TGG | + | chr3.2:78553228-78553247 | None:intergenic | 45.0% | |
| AGTTACATGCACCCGTAGTA+GGG | - | chr3.2:78554947-78554966 | MS.gene06555:intron | 45.0% | |
| ATAAAGTGGTGAGACCCACA+TGG | + | chr3.2:78556148-78556167 | None:intergenic | 45.0% | |
| ATGAAACTGAGAGCTGAGAC+TGG | - | chr3.2:78555641-78555660 | MS.gene06555:CDS | 45.0% | |
| ATGCCTGAAAAATCGGATCC+AGG | + | chr3.2:78553179-78553198 | None:intergenic | 45.0% | |
| CACTCAACTCCAACTTTCCA+AGG | + | chr3.2:78554329-78554348 | None:intergenic | 45.0% | |
| CAGAAAATTGGGTGACCCAA+CGG | - | chr3.2:78552983-78553002 | MS.gene06555:intron | 45.0% | |
| CTACTGTCTTGGTTGGCAAA+AGG | - | chr3.2:78556417-78556436 | MS.gene06555:intron | 45.0% | |
| CTTGGTATCCCTTGGAAAGT+TGG | - | chr3.2:78554317-78554336 | MS.gene06555:intron | 45.0% | |
| GAATCACCCTATCCCTCAAT+TGG | - | chr3.2:78553046-78553065 | MS.gene06555:intron | 45.0% | |
| GATCCAGGAATGAATGGCAA+AGG | + | chr3.2:78553164-78553183 | None:intergenic | 45.0% | |
| GCATTTGGCACTTCACATGT+TGG | - | chr3.2:78553602-78553621 | MS.gene06555:intron | 45.0% | |
| GGAGAATCCAATTGAGGGAT+AGG | + | chr3.2:78553056-78553075 | None:intergenic | 45.0% | |
| GGCAACGTGAATGCAAACAT+AGG | + | chr3.2:78553950-78553969 | None:intergenic | 45.0% | |
| GGTGCAGCTCTTGAAATCAA+TGG | - | chr3.2:78554388-78554407 | MS.gene06555:intron | 45.0% | |
| GTCAGCACTAAACCTGAACA+AGG | + | chr3.2:78556688-78556707 | None:intergenic | 45.0% | |
| GTTTGTTCCTTTGCTGCTCT+TGG | - | chr3.2:78553248-78553267 | MS.gene06555:intron | 45.0% | |
| TAAAGTGGTGAGACCCACAT+GGG | + | chr3.2:78556147-78556166 | None:intergenic | 45.0% | |
| TCTTGGGGTTCTATTTGACC+AGG | - | chr3.2:78556751-78556770 | MS.gene06555:intron | 45.0% | |
| TGAAACTGAGAGCTGAGACT+GGG | - | chr3.2:78555642-78555661 | MS.gene06555:CDS | 45.0% | |
| TGGCAGAATTGGACAGTACA+TGG | - | chr3.2:78556333-78556352 | MS.gene06555:CDS | 45.0% | |
| TGGGTCTCACCACTTTATGT+GGG | - | chr3.2:78556150-78556169 | MS.gene06555:intron | 45.0% | |
| TTGAGGGATAGGGTGATTCT+TGG | + | chr3.2:78553045-78553064 | None:intergenic | 45.0% | |
| ! | CTCCTACATCGGTTAGAGTT+AGG | - | chr3.2:78553072-78553091 | MS.gene06555:intron | 45.0% |
| ! | GGGTTAAGTTATGTGGGTTG+TGG | - | chr3.2:78553726-78553745 | MS.gene06555:CDS | 45.0% |
| ! | GTTGGTGGGGTTAAGTTATG+TGG | - | chr3.2:78553719-78553738 | MS.gene06555:CDS | 45.0% |
| !! | AATGGGTGTTGATCATGTGG+TGG | - | chr3.2:78554406-78554425 | MS.gene06555:intron | 45.0% |
| !! | CATGTTTACTGGCCTTGTTC+AGG | - | chr3.2:78556673-78556692 | MS.gene06555:intron | 45.0% |
| !! | GCAGATTCTTGGAAAGTACC+AGG | - | chr3.2:78553130-78553149 | MS.gene06555:intron | 45.0% |
| !! | GTTGATCATGTGGTGGACTT+GGG | - | chr3.2:78554413-78554432 | MS.gene06555:intron | 45.0% |
| !! | TCTTTGCGGCTTCTGAAATG+GGG | - | chr3.2:78554539-78554558 | MS.gene06555:intron | 45.0% |
| !! | TGTTGATCATGTGGTGGACT+TGG | - | chr3.2:78554412-78554431 | MS.gene06555:intron | 45.0% |
| !!! | TGGTTTTAGGGGAGCTGAAA+AGG | - | chr3.2:78554367-78554386 | MS.gene06555:intron | 45.0% |
| !! | AAATTTAAACTAAAAAAATA+GGG | + | chr3.2:78557018-78557037 | None:intergenic | 5.0% |
| AGTGGTTAGGGTGGGAAAGT+TGG | - | chr3.2:78556786-78556805 | MS.gene06555:intron | 50.0% | |
| ATGGCAAAGGAGGTTTCTCC+TGG | + | chr3.2:78553151-78553170 | None:intergenic | 50.0% | |
| CAAGGAGCTACTGTCTTGGT+TGG | - | chr3.2:78556410-78556429 | MS.gene06555:intron | 50.0% | |
| CAGTTACATGCACCCGTAGT+AGG | - | chr3.2:78554946-78554965 | MS.gene06555:intron | 50.0% | |
| CCAGGAATGAATGGCAAAGG+AGG | + | chr3.2:78553161-78553180 | None:intergenic | 50.0% | |
| CCTATCTCTGATGGCAGTGA+AGG | + | chr3.2:78557223-78557242 | None:intergenic | 50.0% | |
| CCTCCTTTGCCATTCATTCC+TGG | - | chr3.2:78553158-78553177 | MS.gene06555:intron | 50.0% | |
| CCTTCACTGCCATCAGAGAT+AGG | - | chr3.2:78557220-78557239 | MS.gene06555:CDS | 50.0% | |
| CTCTCAAGGAGCTACTGTCT+TGG | - | chr3.2:78556406-78556425 | MS.gene06555:intron | 50.0% | |
| GAAACTGAGAGCTGAGACTG+GGG | - | chr3.2:78555643-78555662 | MS.gene06555:CDS | 50.0% | |
| GATGTCCTGTATGACCCAGT+AGG | - | chr3.2:78554497-78554516 | MS.gene06555:intron | 50.0% | |
| GCAACCAAATCACAACCCTC+CGG | + | chr3.2:78553563-78553582 | None:intergenic | 50.0% | |
| GCTATGTTAGCAGGGATGAC+AGG | + | chr3.2:78554605-78554624 | None:intergenic | 50.0% | |
| GGTCTTGCAGCTGTGCAAAT+TGG | - | chr3.2:78553794-78553813 | MS.gene06555:CDS | 50.0% | |
| GTGGGTCTCACCACTTTATG+TGG | - | chr3.2:78556149-78556168 | MS.gene06555:intron | 50.0% | |
| TCATGAGCTTGCCTCCTACT+GGG | + | chr3.2:78554514-78554533 | None:intergenic | 50.0% | |
| TCATTCTTACGGCCTGTCAG+AGG | - | chr3.2:78556461-78556480 | MS.gene06555:intron | 50.0% | |
| TGAGAGAACCTTACCCACCT+AGG | + | chr3.2:78555786-78555805 | None:intergenic | 50.0% | |
| TTCATGAGCTTGCCTCCTAC+TGG | + | chr3.2:78554515-78554534 | None:intergenic | 50.0% | |
| ! | GGGATTTTCTGACCTCTGAC+AGG | + | chr3.2:78556476-78556495 | None:intergenic | 50.0% |
| !! | GGTTGTGATTTGGTTGCTGC+TGG | - | chr3.2:78553566-78553585 | MS.gene06555:intron | 50.0% |
| !! | TCAGGCATCGTTGATTCCGT+TGG | - | chr3.2:78553191-78553210 | MS.gene06555:intron | 50.0% |
| !!! | TTGCTAGTTTTGGGTGCAGC+AGG | - | chr3.2:78553764-78553783 | MS.gene06555:CDS | 50.0% |
| CGTCTTCAACGCTCACCGTT+GGG | + | chr3.2:78553001-78553020 | None:intergenic | 55.0% | |
| GTCCTGTATGACCCAGTAGG+AGG | - | chr3.2:78554500-78554519 | MS.gene06555:intron | 55.0% | |
| TCGTCTTCAACGCTCACCGT+TGG | + | chr3.2:78553002-78553021 | None:intergenic | 55.0% | |
| TGCCTCCTACTGGGTCATAC+AGG | + | chr3.2:78554505-78554524 | None:intergenic | 55.0% | |
| TGGGTCTGCTAGCCCTACTA+CGG | + | chr3.2:78554962-78554981 | None:intergenic | 55.0% | |
| !! | GGAGCACTTGCTGTGGCATT+TGG | - | chr3.2:78553587-78553606 | MS.gene06555:intron | 55.0% |
| !!! | CTAGTTTTGGGTGCAGCAGG+AGG | - | chr3.2:78553767-78553786 | MS.gene06555:CDS | 55.0% |
| CGTGCCGGAGGGTTGTGATT+TGG | - | chr3.2:78553556-78553575 | MS.gene06555:intron | 60.0% | |
| CTCTGATGGCAGTGAAGGCG+AGG | + | chr3.2:78557218-78557237 | None:intergenic | 60.0% | |
| GATGGCAGTGAAGGCGAGGT+TGG | + | chr3.2:78557214-78557233 | None:intergenic | 60.0% | |
| GGGTCTGCTAGCCCTACTAC+GGG | + | chr3.2:78554961-78554980 | None:intergenic | 60.0% | |
| TGTAGGTTTCGCGTGCCGGA+GGG | - | chr3.2:78553545-78553564 | MS.gene06555:intron | 60.0% | |
| TTGTAGGTTTCGCGTGCCGG+AGG | - | chr3.2:78553544-78553563 | MS.gene06555:intron | 60.0% | |
| TTTGGGTGCAGCAGGAGGTG+TGG | - | chr3.2:78553772-78553791 | MS.gene06555:CDS | 60.0% | |
| ! | TGCTGCTGGAGCACTTGCTG+TGG | - | chr3.2:78553580-78553599 | MS.gene06555:intron | 60.0% |
| ! | TTGGGTGCAGCAGGAGGTGT+GGG | - | chr3.2:78553773-78553792 | MS.gene06555:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 78552870 | 78557302 | 78552870 | ID=MS.gene06555 |
| chr3.2 | mRNA | 78552870 | 78557302 | 78552870 | ID=MS.gene06555.t1;Parent=MS.gene06555 |
| chr3.2 | exon | 78556863 | 78557302 | 78556863 | ID=MS.gene06555.t1.exon1;Parent=MS.gene06555.t1 |
| chr3.2 | CDS | 78556863 | 78557302 | 78556863 | ID=cds.MS.gene06555.t1;Parent=MS.gene06555.t1 |
| chr3.2 | exon | 78556514 | 78556622 | 78556514 | ID=MS.gene06555.t1.exon2;Parent=MS.gene06555.t1 |
| chr3.2 | CDS | 78556514 | 78556622 | 78556514 | ID=cds.MS.gene06555.t1;Parent=MS.gene06555.t1 |
| chr3.2 | exon | 78556320 | 78556411 | 78556320 | ID=MS.gene06555.t1.exon3;Parent=MS.gene06555.t1 |
| chr3.2 | CDS | 78556320 | 78556411 | 78556320 | ID=cds.MS.gene06555.t1;Parent=MS.gene06555.t1 |
| chr3.2 | exon | 78555538 | 78555796 | 78555538 | ID=MS.gene06555.t1.exon4;Parent=MS.gene06555.t1 |
| chr3.2 | CDS | 78555538 | 78555796 | 78555538 | ID=cds.MS.gene06555.t1;Parent=MS.gene06555.t1 |
| chr3.2 | exon | 78553690 | 78553833 | 78553690 | ID=MS.gene06555.t1.exon5;Parent=MS.gene06555.t1 |
| chr3.2 | CDS | 78553690 | 78553833 | 78553690 | ID=cds.MS.gene06555.t1;Parent=MS.gene06555.t1 |
| chr3.2 | exon | 78552870 | 78552962 | 78552870 | ID=MS.gene06555.t1.exon6;Parent=MS.gene06555.t1 |
| chr3.2 | CDS | 78552870 | 78552962 | 78552870 | ID=cds.MS.gene06555.t1;Parent=MS.gene06555.t1 |
| Gene Sequence |
| Protein sequence |
