Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065865.t1 | KEH40695.1 | 33.5 | 164 | 104 | 2 | 48 | 210 | 198 | 357 | 8.20E-15 | 90.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065865.t1 | A0A072VRD3 | 33.5 | 164 | 104 | 2 | 48 | 210 | 198 | 357 | 5.9e-15 | 90.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052456 | MS.gene065865 | 0.810904 | 9.14E-51 | -1.69E-46 |
| MS.gene05288 | MS.gene065865 | 0.826402 | 2.77E-54 | -1.69E-46 |
| MS.gene05289 | MS.gene065865 | 0.835674 | 1.46E-56 | -1.69E-46 |
| MS.gene054801 | MS.gene065865 | 0.831247 | 1.86E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065865.t1 | MTR_0572s0010 | 27.488 | 211 | 136 | 2 | 1 | 211 | 228 | 421 | 6.34e-22 | 94.0 |
| MS.gene065865.t1 | MTR_1g033450 | 33.133 | 166 | 106 | 2 | 46 | 210 | 196 | 357 | 1.04e-20 | 90.1 |
| MS.gene065865.t1 | MTR_1g050495 | 25.455 | 220 | 156 | 3 | 1 | 219 | 224 | 436 | 1.24e-20 | 90.1 |
| MS.gene065865.t1 | MTR_3g448620 | 28.019 | 207 | 142 | 3 | 1 | 207 | 219 | 418 | 1.36e-19 | 87.0 |
| MS.gene065865.t1 | MTR_6g079380 | 27.727 | 220 | 140 | 3 | 1 | 219 | 234 | 435 | 1.37e-19 | 87.0 |
| MS.gene065865.t1 | MTR_6g079240 | 27.363 | 201 | 138 | 3 | 1 | 200 | 68 | 261 | 3.89e-18 | 82.8 |
| MS.gene065865.t1 | MTR_6g079240 | 22.727 | 198 | 147 | 2 | 13 | 210 | 185 | 376 | 3.70e-12 | 65.5 |
| MS.gene065865.t1 | MTR_6g078160 | 27.273 | 220 | 152 | 3 | 1 | 219 | 222 | 434 | 4.74e-18 | 82.8 |
| MS.gene065865.t1 | MTR_6g078160 | 25.000 | 192 | 138 | 2 | 7 | 198 | 123 | 308 | 4.22e-12 | 65.1 |
| MS.gene065865.t1 | MTR_2g035630 | 27.727 | 220 | 151 | 3 | 1 | 219 | 224 | 436 | 4.89e-18 | 82.4 |
| MS.gene065865.t1 | MTR_6g077540 | 26.941 | 219 | 154 | 3 | 1 | 219 | 250 | 462 | 4.94e-18 | 82.4 |
| MS.gene065865.t1 | MTR_6g079310 | 26.941 | 219 | 152 | 3 | 1 | 218 | 180 | 391 | 5.00e-18 | 82.4 |
| MS.gene065865.t1 | MTR_6g079310 | 22.727 | 198 | 147 | 2 | 13 | 210 | 297 | 488 | 3.14e-12 | 65.5 |
| MS.gene065865.t1 | MTR_6g079920 | 26.126 | 222 | 157 | 4 | 1 | 221 | 251 | 466 | 7.19e-18 | 82.0 |
| MS.gene065865.t1 | MTR_6g079920 | 23.188 | 207 | 148 | 4 | 1 | 204 | 321 | 519 | 7.01e-12 | 64.7 |
| MS.gene065865.t1 | MTR_0014s0210 | 25.943 | 212 | 146 | 4 | 1 | 211 | 178 | 379 | 1.62e-17 | 80.9 |
| MS.gene065865.t1 | MTR_6g478210 | 26.818 | 220 | 153 | 4 | 1 | 219 | 68 | 280 | 1.95e-17 | 80.1 |
| MS.gene065865.t1 | MTR_6g079890 | 26.818 | 220 | 153 | 4 | 1 | 219 | 204 | 416 | 3.21e-17 | 80.1 |
| MS.gene065865.t1 | MTR_0014s0260 | 27.363 | 201 | 138 | 3 | 1 | 200 | 160 | 353 | 5.15e-17 | 79.3 |
| MS.gene065865.t1 | MTR_6g079830 | 25.114 | 219 | 158 | 3 | 1 | 219 | 251 | 463 | 5.80e-17 | 79.7 |
| MS.gene065865.t1 | MTR_0237s0070 | 27.523 | 218 | 150 | 3 | 2 | 218 | 360 | 570 | 8.26e-17 | 79.0 |
| MS.gene065865.t1 | MTR_0237s0070 | 25.728 | 206 | 143 | 3 | 7 | 210 | 260 | 457 | 7.38e-12 | 64.7 |
| MS.gene065865.t1 | MTR_0237s0070 | 22.564 | 195 | 145 | 2 | 16 | 210 | 479 | 667 | 3.22e-11 | 62.8 |
| MS.gene065865.t1 | MTR_7g076550 | 27.014 | 211 | 149 | 2 | 1 | 211 | 236 | 441 | 9.39e-17 | 79.0 |
| MS.gene065865.t1 | MTR_0654s0010 | 28.947 | 190 | 117 | 5 | 1 | 179 | 116 | 298 | 1.21e-16 | 78.2 |
| MS.gene065865.t1 | MTR_6g065560 | 27.749 | 191 | 132 | 2 | 1 | 191 | 267 | 451 | 1.32e-16 | 78.6 |
| MS.gene065865.t1 | MTR_6g065540 | 27.363 | 201 | 138 | 3 | 1 | 200 | 236 | 429 | 1.52e-16 | 78.2 |
| MS.gene065865.t1 | MTR_6g065540 | 21.698 | 212 | 156 | 3 | 1 | 210 | 341 | 544 | 5.18e-11 | 62.0 |
| MS.gene065865.t1 | MTR_0014s0180 | 25.472 | 212 | 150 | 3 | 1 | 211 | 227 | 431 | 1.63e-16 | 78.2 |
| MS.gene065865.t1 | MTR_6g079210 | 24.057 | 212 | 153 | 3 | 1 | 211 | 68 | 272 | 1.64e-16 | 77.8 |
| MS.gene065865.t1 | MTR_6g079210 | 21.698 | 212 | 156 | 4 | 1 | 210 | 173 | 376 | 6.54e-11 | 61.6 |
| MS.gene065865.t1 | MTR_3g034990 | 26.415 | 212 | 148 | 3 | 1 | 211 | 234 | 438 | 1.96e-16 | 77.8 |
| MS.gene065865.t1 | MTR_3g061000 | 25.000 | 220 | 157 | 3 | 1 | 219 | 235 | 447 | 2.01e-16 | 77.8 |
| MS.gene065865.t1 | MTR_0019s0210 | 23.223 | 211 | 156 | 2 | 1 | 211 | 229 | 433 | 2.19e-16 | 77.8 |
| MS.gene065865.t1 | MTR_6g079250 | 25.943 | 212 | 149 | 4 | 1 | 211 | 68 | 272 | 2.91e-16 | 77.0 |
| MS.gene065865.t1 | MTR_6g079180 | 24.545 | 220 | 158 | 3 | 1 | 219 | 68 | 280 | 3.32e-16 | 76.6 |
| MS.gene065865.t1 | MTR_6g080210 | 25.604 | 207 | 145 | 4 | 1 | 204 | 221 | 421 | 3.82e-16 | 77.0 |
| MS.gene065865.t1 | MTR_6g080210 | 23.005 | 213 | 143 | 6 | 1 | 204 | 291 | 491 | 1.99e-11 | 63.2 |
| MS.gene065865.t1 | MTR_0308s0020 | 25.000 | 220 | 157 | 3 | 1 | 219 | 220 | 432 | 4.51e-16 | 77.0 |
| MS.gene065865.t1 | MTR_1g064390 | 24.631 | 203 | 143 | 4 | 1 | 200 | 220 | 415 | 9.56e-16 | 75.9 |
| MS.gene065865.t1 | MTR_4g107180 | 23.288 | 219 | 162 | 2 | 1 | 219 | 119 | 331 | 1.10e-15 | 75.5 |
| MS.gene065865.t1 | MTR_1g045850 | 21.801 | 211 | 159 | 2 | 1 | 211 | 176 | 380 | 1.25e-15 | 75.5 |
| MS.gene065865.t1 | MTR_6g078210 | 25.114 | 219 | 158 | 2 | 1 | 219 | 238 | 450 | 1.39e-15 | 75.5 |
| MS.gene065865.t1 | MTR_6g078210 | 25.121 | 207 | 144 | 6 | 1 | 204 | 308 | 506 | 5.91e-11 | 62.0 |
| MS.gene065865.t1 | MTR_0177s0060 | 24.171 | 211 | 136 | 2 | 1 | 211 | 214 | 400 | 2.17e-15 | 74.7 |
| MS.gene065865.t1 | MTR_0014s0250 | 24.645 | 211 | 153 | 3 | 1 | 211 | 224 | 428 | 7.56e-15 | 73.2 |
| MS.gene065865.t1 | MTR_6g445320 | 24.645 | 211 | 146 | 3 | 1 | 211 | 223 | 420 | 1.15e-14 | 72.8 |
| MS.gene065865.t1 | MTR_7g012890 | 26.415 | 212 | 148 | 3 | 1 | 211 | 225 | 429 | 1.24e-14 | 72.8 |
| MS.gene065865.t1 | MTR_6g079960 | 25.571 | 219 | 157 | 3 | 1 | 219 | 229 | 441 | 1.63e-14 | 72.4 |
| MS.gene065865.t1 | MTR_6g069300 | 23.744 | 219 | 161 | 3 | 1 | 219 | 230 | 442 | 2.96e-14 | 71.6 |
| MS.gene065865.t1 | MTR_6g078190 | 24.479 | 192 | 139 | 2 | 20 | 211 | 152 | 337 | 3.12e-14 | 71.6 |
| MS.gene065865.t1 | MTR_6g078190 | 24.752 | 202 | 141 | 4 | 6 | 204 | 208 | 401 | 5.91e-11 | 62.0 |
| MS.gene065865.t1 | MTR_5g095130 | 23.474 | 213 | 154 | 3 | 1 | 213 | 648 | 851 | 4.10e-14 | 71.2 |
| MS.gene065865.t1 | MTR_1g016213 | 25.556 | 180 | 128 | 2 | 1 | 180 | 17 | 190 | 4.61e-14 | 69.7 |
| MS.gene065865.t1 | MTR_6g079220 | 22.277 | 202 | 147 | 4 | 1 | 200 | 229 | 422 | 5.08e-14 | 70.9 |
| MS.gene065865.t1 | MTR_6g079590 | 24.658 | 219 | 159 | 2 | 1 | 219 | 228 | 440 | 6.09e-14 | 70.9 |
| MS.gene065865.t1 | MTR_6g079590 | 22.115 | 208 | 152 | 4 | 7 | 212 | 129 | 328 | 1.05e-11 | 63.9 |
| MS.gene065865.t1 | MTR_6g079590 | 25.234 | 214 | 150 | 4 | 1 | 212 | 333 | 538 | 1.43e-11 | 63.5 |
| MS.gene065865.t1 | MTR_2g048635 | 26.667 | 135 | 91 | 3 | 49 | 179 | 111 | 241 | 7.97e-14 | 68.9 |
| MS.gene065865.t1 | MTR_1840s0010 | 31.298 | 131 | 84 | 2 | 1 | 131 | 211 | 335 | 1.05e-13 | 69.3 |
| MS.gene065865.t1 | MTR_0429s0020 | 23.223 | 211 | 156 | 2 | 1 | 211 | 237 | 441 | 1.38e-13 | 69.7 |
| MS.gene065865.t1 | MTR_6g061120 | 24.658 | 219 | 159 | 2 | 1 | 219 | 90 | 302 | 2.27e-13 | 68.9 |
| MS.gene065865.t1 | MTR_6g471100 | 23.474 | 213 | 155 | 3 | 1 | 212 | 304 | 509 | 2.62e-13 | 68.9 |
| MS.gene065865.t1 | MTR_6g471100 | 27.632 | 152 | 100 | 4 | 1 | 150 | 234 | 377 | 8.82e-11 | 61.6 |
| MS.gene065865.t1 | MTR_6g068820 | 23.288 | 219 | 162 | 3 | 1 | 219 | 145 | 357 | 3.25e-13 | 68.6 |
| MS.gene065865.t1 | MTR_4g068360 | 24.752 | 202 | 142 | 5 | 1 | 200 | 383 | 576 | 6.00e-13 | 67.8 |
| MS.gene065865.t1 | MTR_1g016220 | 25.143 | 175 | 125 | 2 | 6 | 180 | 27 | 195 | 6.59e-13 | 66.6 |
| MS.gene065865.t1 | MTR_6g069180 | 25.854 | 205 | 146 | 2 | 8 | 212 | 129 | 327 | 7.27e-13 | 67.4 |
| MS.gene065865.t1 | MTR_6g069180 | 24.057 | 212 | 153 | 4 | 1 | 211 | 227 | 431 | 1.01e-11 | 63.9 |
| MS.gene065865.t1 | MTR_0110s0060 | 21.918 | 219 | 165 | 2 | 1 | 219 | 221 | 433 | 1.07e-12 | 67.0 |
| MS.gene065865.t1 | MTR_1g033960 | 21.500 | 200 | 151 | 2 | 1 | 200 | 360 | 553 | 1.11e-12 | 67.0 |
| MS.gene065865.t1 | MTR_6g079290 | 22.927 | 205 | 143 | 3 | 1 | 204 | 1 | 191 | 1.46e-12 | 65.5 |
| MS.gene065865.t1 | MTR_6g082970 | 24.528 | 212 | 152 | 3 | 1 | 211 | 25 | 229 | 2.03e-12 | 64.7 |
| MS.gene065865.t1 | MTR_6g069840 | 24.855 | 173 | 120 | 4 | 1 | 171 | 207 | 371 | 2.30e-12 | 65.9 |
| MS.gene065865.t1 | MTR_6g069840 | 24.859 | 177 | 123 | 4 | 1 | 175 | 223 | 391 | 2.61e-12 | 65.9 |
| MS.gene065865.t1 | MTR_1g029490 | 20.379 | 211 | 162 | 2 | 1 | 211 | 231 | 435 | 3.20e-12 | 65.5 |
| MS.gene065865.t1 | MTR_0054s0140 | 24.876 | 201 | 143 | 4 | 1 | 200 | 284 | 477 | 4.96e-12 | 65.1 |
| MS.gene065865.t1 | MTR_1g091880 | 26.347 | 167 | 115 | 3 | 1 | 166 | 43 | 202 | 7.82e-12 | 63.9 |
| MS.gene065865.t1 | MTR_6g068790 | 23.697 | 211 | 155 | 3 | 1 | 211 | 236 | 440 | 1.01e-11 | 63.9 |
| MS.gene065865.t1 | MTR_8g107050 | 22.944 | 231 | 145 | 5 | 1 | 200 | 326 | 554 | 1.56e-11 | 63.5 |
| MS.gene065865.t1 | MTR_6g077800 | 23.077 | 182 | 129 | 4 | 6 | 184 | 223 | 396 | 2.00e-11 | 63.2 |
| MS.gene065865.t1 | MTR_8g107050 | 22.944 | 231 | 145 | 5 | 1 | 200 | 326 | 554 | 2.11e-11 | 63.2 |
| MS.gene065865.t1 | MTR_8g098755 | 25.888 | 197 | 137 | 3 | 6 | 200 | 275 | 464 | 2.33e-11 | 63.2 |
| MS.gene065865.t1 | MTR_5g029690 | 24.167 | 240 | 151 | 4 | 1 | 210 | 382 | 620 | 3.80e-11 | 62.4 |
| MS.gene065865.t1 | MTR_6g478130 | 23.671 | 207 | 147 | 4 | 1 | 204 | 152 | 350 | 4.30e-11 | 62.0 |
| MS.gene065865.t1 | MTR_7g405940 | 22.500 | 200 | 146 | 4 | 1 | 198 | 259 | 451 | 5.39e-11 | 62.0 |
| MS.gene065865.t1 | MTR_3g061020 | 25.882 | 170 | 125 | 1 | 49 | 218 | 122 | 290 | 5.66e-11 | 61.6 |
| MS.gene065865.t1 | MTR_6g079270 | 23.256 | 215 | 156 | 4 | 12 | 221 | 117 | 327 | 6.12e-11 | 61.6 |
| MS.gene065865.t1 | MTR_5g031740 | 22.477 | 218 | 154 | 4 | 13 | 225 | 263 | 470 | 8.20e-11 | 61.6 |
| MS.gene065865.t1 | MTR_5g090210 | 24.737 | 190 | 137 | 3 | 1 | 190 | 544 | 727 | 8.70e-11 | 61.6 |
| MS.gene065865.t1 | MTR_7g011500 | 26.190 | 210 | 135 | 7 | 1 | 200 | 496 | 695 | 9.14e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065865.t1 | AT3G06920 | 26.852 | 216 | 143 | 4 | 1 | 213 | 627 | 830 | 6.49e-17 | 79.7 |
| MS.gene065865.t1 | AT3G06920 | 26.852 | 216 | 143 | 4 | 1 | 213 | 627 | 830 | 6.49e-17 | 79.7 |
| MS.gene065865.t1 | AT3G06920 | 25.822 | 213 | 149 | 3 | 1 | 213 | 613 | 816 | 6.60e-17 | 79.7 |
| MS.gene065865.t1 | AT5G41170 | 25.221 | 226 | 148 | 6 | 1 | 213 | 103 | 320 | 1.07e-14 | 72.8 |
| MS.gene065865.t1 | AT5G41170 | 25.221 | 226 | 148 | 6 | 1 | 213 | 203 | 420 | 2.05e-14 | 72.0 |
| MS.gene065865.t1 | AT5G41170 | 25.221 | 226 | 148 | 6 | 1 | 213 | 203 | 420 | 2.33e-14 | 72.0 |
| MS.gene065865.t1 | AT5G59900 | 24.645 | 211 | 148 | 4 | 1 | 208 | 288 | 490 | 7.36e-14 | 70.5 |
| MS.gene065865.t1 | AT1G09900 | 21.106 | 199 | 150 | 3 | 7 | 204 | 376 | 568 | 2.86e-13 | 68.9 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.20e-13 | 68.9 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.20e-13 | 68.9 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.20e-13 | 68.9 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.20e-13 | 68.9 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.20e-13 | 68.9 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.20e-13 | 68.9 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.20e-13 | 68.9 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.20e-13 | 68.9 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.20e-13 | 68.9 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.20e-13 | 68.9 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.20e-13 | 68.9 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.20e-13 | 68.9 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.41e-13 | 68.6 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.41e-13 | 68.6 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.41e-13 | 68.6 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.41e-13 | 68.6 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.41e-13 | 68.6 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.41e-13 | 68.6 |
| MS.gene065865.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 1 | 198 | 579 | 786 | 3.41e-13 | 68.6 |
| MS.gene065865.t1 | AT4G28010 | 24.242 | 198 | 143 | 3 | 8 | 204 | 175 | 366 | 1.29e-12 | 67.0 |
| MS.gene065865.t1 | AT1G12620 | 21.782 | 202 | 152 | 2 | 11 | 212 | 283 | 478 | 1.40e-12 | 66.6 |
| MS.gene065865.t1 | AT1G12620 | 28.750 | 160 | 106 | 5 | 49 | 204 | 141 | 296 | 2.32e-12 | 66.2 |
| MS.gene065865.t1 | AT1G62930 | 24.257 | 202 | 143 | 3 | 1 | 200 | 211 | 404 | 2.98e-12 | 65.9 |
| MS.gene065865.t1 | AT2G02150 | 24.402 | 209 | 146 | 3 | 6 | 211 | 363 | 562 | 3.57e-12 | 65.5 |
| MS.gene065865.t1 | AT2G02150 | 24.402 | 209 | 146 | 3 | 6 | 211 | 363 | 562 | 3.57e-12 | 65.5 |
| MS.gene065865.t1 | AT2G01740 | 22.222 | 207 | 153 | 4 | 7 | 211 | 88 | 288 | 3.99e-12 | 65.5 |
| MS.gene065865.t1 | AT1G62590 | 25.463 | 216 | 146 | 5 | 1 | 213 | 216 | 419 | 8.25e-12 | 64.3 |
| MS.gene065865.t1 | AT1G62590 | 25.463 | 216 | 146 | 5 | 1 | 213 | 216 | 419 | 8.25e-12 | 64.3 |
| MS.gene065865.t1 | AT3G16710 | 21.963 | 214 | 157 | 3 | 1 | 212 | 249 | 454 | 1.08e-11 | 63.9 |
| MS.gene065865.t1 | AT3G16710 | 22.277 | 202 | 147 | 3 | 1 | 200 | 249 | 442 | 1.36e-11 | 63.5 |
| MS.gene065865.t1 | AT1G62720 | 25.000 | 212 | 145 | 5 | 7 | 216 | 136 | 335 | 1.53e-11 | 63.5 |
| MS.gene065865.t1 | AT4G16390 | 26.816 | 179 | 118 | 4 | 7 | 181 | 242 | 411 | 1.85e-11 | 63.5 |
| MS.gene065865.t1 | AT2G31400 | 23.423 | 222 | 160 | 4 | 5 | 224 | 404 | 617 | 2.17e-11 | 63.5 |
| MS.gene065865.t1 | AT2G31400 | 23.423 | 222 | 160 | 4 | 5 | 224 | 404 | 617 | 2.30e-11 | 63.2 |
| MS.gene065865.t1 | AT1G63080 | 22.535 | 213 | 155 | 3 | 1 | 211 | 266 | 470 | 2.38e-11 | 63.2 |
| MS.gene065865.t1 | AT1G63080 | 22.535 | 213 | 155 | 3 | 1 | 211 | 266 | 470 | 2.38e-11 | 63.2 |
| MS.gene065865.t1 | AT1G63080 | 22.535 | 213 | 155 | 3 | 1 | 211 | 266 | 470 | 2.38e-11 | 63.2 |
| MS.gene065865.t1 | AT5G39710 | 24.103 | 195 | 131 | 5 | 8 | 196 | 413 | 596 | 2.51e-11 | 63.2 |
| MS.gene065865.t1 | AT1G62680 | 23.148 | 216 | 151 | 5 | 1 | 213 | 146 | 349 | 2.99e-11 | 62.8 |
| MS.gene065865.t1 | AT1G62680 | 23.148 | 216 | 151 | 5 | 1 | 213 | 146 | 349 | 2.99e-11 | 62.8 |
| MS.gene065865.t1 | AT5G18475 | 23.810 | 210 | 154 | 3 | 3 | 211 | 189 | 393 | 3.01e-11 | 62.8 |
| MS.gene065865.t1 | AT1G05670 | 23.383 | 201 | 143 | 5 | 8 | 205 | 279 | 471 | 3.48e-11 | 62.8 |
| MS.gene065865.t1 | AT1G05670 | 23.383 | 201 | 143 | 5 | 8 | 205 | 279 | 471 | 3.48e-11 | 62.8 |
| MS.gene065865.t1 | AT1G05670 | 23.383 | 201 | 143 | 5 | 8 | 205 | 279 | 471 | 3.48e-11 | 62.8 |
| MS.gene065865.t1 | AT3G22470 | 21.649 | 194 | 142 | 3 | 7 | 198 | 137 | 322 | 4.07e-11 | 62.4 |
| MS.gene065865.t1 | AT5G46100 | 23.464 | 179 | 127 | 3 | 7 | 183 | 189 | 359 | 4.10e-11 | 62.4 |
| MS.gene065865.t1 | AT3G22470 | 21.649 | 194 | 142 | 3 | 7 | 198 | 137 | 322 | 4.32e-11 | 62.4 |
| MS.gene065865.t1 | AT1G06580 | 22.897 | 214 | 154 | 4 | 1 | 213 | 34 | 237 | 4.65e-11 | 62.0 |
| MS.gene065865.t1 | AT1G06580 | 22.897 | 214 | 154 | 4 | 1 | 213 | 34 | 237 | 4.65e-11 | 62.0 |
| MS.gene065865.t1 | AT1G63330 | 25.000 | 216 | 147 | 5 | 1 | 213 | 141 | 344 | 4.68e-11 | 62.4 |
| MS.gene065865.t1 | AT1G63330 | 25.000 | 216 | 147 | 5 | 1 | 213 | 141 | 344 | 4.68e-11 | 62.4 |
| MS.gene065865.t1 | AT1G63330 | 25.000 | 216 | 147 | 5 | 1 | 213 | 141 | 344 | 4.68e-11 | 62.4 |
| MS.gene065865.t1 | AT1G12775 | 20.792 | 202 | 150 | 3 | 13 | 212 | 301 | 494 | 7.81e-11 | 61.6 |
| MS.gene065865.t1 | AT1G06580 | 22.535 | 213 | 156 | 3 | 1 | 213 | 140 | 343 | 8.03e-11 | 61.6 |
Find 48 sgRNAs with CRISPR-Local
Find 57 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTCTATCATGATAAAAT+TGG | 0.139982 | 2.4:+31365994 | MS.gene065865:CDS |
| CAGGTTGAGCATTGCTTATT+AGG | 0.240333 | 2.4:-31366273 | None:intergenic |
| GGCTCTCTGATGGACTATTT+TGG | 0.245917 | 2.4:+31365938 | MS.gene065865:CDS |
| GCAGTAAAGGACTTCGCATT+TGG | 0.316585 | 2.4:-31366133 | None:intergenic |
| TACTTAGATATTACCTCATT+TGG | 0.327256 | 2.4:+31365917 | MS.gene065865:CDS |
| CAGTAAAGGACTTCGCATTT+GGG | 0.338011 | 2.4:-31366132 | None:intergenic |
| TTGTTAACGTCTGTGGTAAA+TGG | 0.342942 | 2.4:+31366250 | MS.gene065865:CDS |
| CTTTCTATCATGATAAAATT+GGG | 0.357563 | 2.4:+31365995 | MS.gene065865:CDS |
| GGTTGTACTCAACAGCCTTA+TGG | 0.358829 | 2.4:+31366033 | MS.gene065865:CDS |
| TTTGGTCATGCGTGTGAAAA+TGG | 0.364306 | 2.4:+31366061 | MS.gene065865:CDS |
| AACAGCCTTATGGAGGTCTT+TGG | 0.388961 | 2.4:+31366043 | MS.gene065865:CDS |
| TGACTTGATGTCAAAATATC+TGG | 0.392050 | 2.4:-31365894 | None:intergenic |
| ATCCACTCATCAATAATTCA+TGG | 0.399275 | 2.4:+31365812 | MS.gene065865:CDS |
| CAGATTTCTTAGATTTGAAA+AGG | 0.428586 | 2.4:+31366165 | MS.gene065865:CDS |
| TTCCTTTGGTTCCACCATCA+AGG | 0.433297 | 2.4:-31366408 | None:intergenic |
| GAACACAAACGTGCCCTTGA+TGG | 0.444045 | 2.4:+31366394 | MS.gene065865:CDS |
| ATTGGGAATACAGCCCAATC+TGG | 0.463417 | 2.4:+31366012 | MS.gene065865:CDS |
| TCCTTTGGTTCCACCATCAA+GGG | 0.467264 | 2.4:-31366407 | None:intergenic |
| TCTGTTAATTACTGCAGTAA+AGG | 0.468872 | 2.4:-31366146 | None:intergenic |
| AGAAACCGAAGGGCTTGTTC+CGG | 0.474472 | 2.4:-31365854 | None:intergenic |
| CCACTGCCTTGTTAAGCAAC+CGG | 0.482626 | 2.4:+31365835 | MS.gene065865:CDS |
| GCTGTTGAGTACAACCAGAT+TGG | 0.482656 | 2.4:-31366026 | None:intergenic |
| TACCTCATTTGGCTCTCTGA+TGG | 0.484871 | 2.4:+31365928 | MS.gene065865:CDS |
| CTGTTGAGTACAACCAGATT+GGG | 0.488767 | 2.4:-31366025 | None:intergenic |
| ACAAAGAGTAGTGCTTTCTC+AGG | 0.492053 | 2.4:-31366292 | None:intergenic |
| AGCAACCGGAACAAGCCCTT+CGG | 0.509997 | 2.4:+31365849 | MS.gene065865:CDS |
| CTTGTTCCGGTTGCTTAACA+AGG | 0.514050 | 2.4:-31365841 | None:intergenic |
| GCCCTTGATGGTGGAACCAA+AGG | 0.542001 | 2.4:+31366406 | MS.gene065865:CDS |
| CACAAACGTGCCCTTGATGG+TGG | 0.551888 | 2.4:+31366397 | MS.gene065865:CDS |
| TCAGAAATTGTTAACGTCTG+TGG | 0.560139 | 2.4:+31366243 | MS.gene065865:CDS |
| CCGGTTGCTTAACAAGGCAG+TGG | 0.567872 | 2.4:-31365835 | None:intergenic |
| TGGTGGAACCAAAGGAAAAG+AGG | 0.572747 | 2.4:+31366414 | MS.gene065865:CDS |
| GTGAAAATGGTCGAAATCCG+TGG | 0.574926 | 2.4:+31366074 | MS.gene065865:CDS |
| TGATGAGTGGATGAAATAAG+TGG | 0.575654 | 2.4:-31365801 | None:intergenic |
| CATGACCAAAGACCTCCATA+AGG | 0.612208 | 2.4:-31366048 | None:intergenic |
| GGTGGAACCAAAGGAAAAGA+GGG | 0.613088 | 2.4:+31366415 | MS.gene065865:CDS |
| AAGTGTTGGAAGGATTGAAG+AGG | 0.617326 | 2.4:+31365961 | MS.gene065865:CDS |
| GTCCATCAGAGAGCCAAATG+AGG | 0.621267 | 2.4:-31365930 | None:intergenic |
| AGTAAAGGACTTCGCATTTG+GGG | 0.623142 | 2.4:-31366131 | None:intergenic |
| AACAGTATAACACGGAAGGT+CGG | 0.624195 | 2.4:-31366344 | None:intergenic |
| CAAGCTTTAAAAGAAACCGA+AGG | 0.627260 | 2.4:-31365865 | None:intergenic |
| TGAAAACAGTATAACACGGA+AGG | 0.627817 | 2.4:-31366348 | None:intergenic |
| AAAACATAGAAAAGCATCCA+CGG | 0.628919 | 2.4:-31366091 | None:intergenic |
| AAGCTTTAAAAGAAACCGAA+GGG | 0.631235 | 2.4:-31365864 | None:intergenic |
| GGCCATGAATTATTGATGAG+TGG | 0.640779 | 2.4:-31365814 | None:intergenic |
| CTCATGAAAACAGTATAACA+CGG | 0.658543 | 2.4:-31366352 | None:intergenic |
| TGTACTCAACAGCCTTATGG+AGG | 0.660545 | 2.4:+31366036 | MS.gene065865:CDS |
| GATGAGTGGATGAAATAAGT+GGG | 0.663581 | 2.4:-31365800 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTTCTATCATGATAAAAT+TGG | + | chr2.4:31365994-31366013 | MS.gene065865:CDS | 20.0% |
| !! | CTTTCTATCATGATAAAATT+GGG | + | chr2.4:31365995-31366014 | MS.gene065865:CDS | 20.0% |
| ! | CAGATTTCTTAGATTTGAAA+AGG | + | chr2.4:31366165-31366184 | MS.gene065865:CDS | 25.0% |
| ! | GTTCATAGAGAAAAAGTTTA+AGG | + | chr2.4:31366321-31366340 | MS.gene065865:CDS | 25.0% |
| ! | TACTTAGATATTACCTCATT+TGG | + | chr2.4:31365917-31365936 | MS.gene065865:CDS | 25.0% |
| ATCCACTCATCAATAATTCA+TGG | + | chr2.4:31365812-31365831 | MS.gene065865:CDS | 30.0% | |
| CTCATGAAAACAGTATAACA+CGG | - | chr2.4:31366355-31366374 | None:intergenic | 30.0% | |
| TCTGTTAATTACTGCAGTAA+AGG | - | chr2.4:31366149-31366168 | None:intergenic | 30.0% | |
| TGACTTGATGTCAAAATATC+TGG | - | chr2.4:31365897-31365916 | None:intergenic | 30.0% | |
| ! | GGATGCTTTTCTATGTTTTA+GGG | + | chr2.4:31366095-31366114 | MS.gene065865:CDS | 30.0% |
| ! | GTGTTATACTGTTTTCATGA+GGG | + | chr2.4:31366354-31366373 | MS.gene065865:CDS | 30.0% |
| ! | TGGATGCTTTTCTATGTTTT+AGG | + | chr2.4:31366094-31366113 | MS.gene065865:CDS | 30.0% |
| !! | AAAACATAGAAAAGCATCCA+CGG | - | chr2.4:31366094-31366113 | None:intergenic | 30.0% |
| !! | AAGCTTTAAAAGAAACCGAA+GGG | - | chr2.4:31365867-31365886 | None:intergenic | 30.0% |
| GATGAGTGGATGAAATAAGT+GGG | - | chr2.4:31365803-31365822 | None:intergenic | 35.0% | |
| TCAGAAATTGTTAACGTCTG+TGG | + | chr2.4:31366243-31366262 | MS.gene065865:CDS | 35.0% | |
| TGAAAACAGTATAACACGGA+AGG | - | chr2.4:31366351-31366370 | None:intergenic | 35.0% | |
| TGATGAGTGGATGAAATAAG+TGG | - | chr2.4:31365804-31365823 | None:intergenic | 35.0% | |
| TTGTTAACGTCTGTGGTAAA+TGG | + | chr2.4:31366250-31366269 | MS.gene065865:CDS | 35.0% | |
| ! | AACAAAACCCTCTTTTCCTT+TGG | - | chr2.4:31366425-31366444 | None:intergenic | 35.0% |
| ! | CGTGTTATACTGTTTTCATG+AGG | + | chr2.4:31366353-31366372 | MS.gene065865:CDS | 35.0% |
| !! | ATGGACTATTTTGGAAGTGT+TGG | + | chr2.4:31365947-31365966 | MS.gene065865:CDS | 35.0% |
| !! | CAAGCTTTAAAAGAAACCGA+AGG | - | chr2.4:31365868-31365887 | None:intergenic | 35.0% |
| !!! | ACTATTTTGGAAGTGTTGGA+AGG | + | chr2.4:31365951-31365970 | MS.gene065865:CDS | 35.0% |
| AACAGTATAACACGGAAGGT+CGG | - | chr2.4:31366347-31366366 | None:intergenic | 40.0% | |
| ACAAAGAGTAGTGCTTTCTC+AGG | - | chr2.4:31366295-31366314 | None:intergenic | 40.0% | |
| AGTAAAGGACTTCGCATTTG+GGG | - | chr2.4:31366134-31366153 | None:intergenic | 40.0% | |
| CAGTAAAGGACTTCGCATTT+GGG | - | chr2.4:31366135-31366154 | None:intergenic | 40.0% | |
| CTGTTGAGTACAACCAGATT+GGG | - | chr2.4:31366028-31366047 | None:intergenic | 40.0% | |
| GGCCATGAATTATTGATGAG+TGG | - | chr2.4:31365817-31365836 | None:intergenic | 40.0% | |
| TTTGGTCATGCGTGTGAAAA+TGG | + | chr2.4:31366061-31366080 | MS.gene065865:CDS | 40.0% | |
| ! | CAGGTTGAGCATTGCTTATT+AGG | - | chr2.4:31366276-31366295 | None:intergenic | 40.0% |
| !! | AAGTGTTGGAAGGATTGAAG+AGG | + | chr2.4:31365961-31365980 | MS.gene065865:CDS | 40.0% |
| !!! | TTCATGAGGGCTTGTTTTGA+AGG | + | chr2.4:31366367-31366386 | MS.gene065865:CDS | 40.0% |
| ATTGGGAATACAGCCCAATC+TGG | + | chr2.4:31366012-31366031 | MS.gene065865:CDS | 45.0% | |
| CATGACCAAAGACCTCCATA+AGG | - | chr2.4:31366051-31366070 | None:intergenic | 45.0% | |
| CTTGTTCCGGTTGCTTAACA+AGG | - | chr2.4:31365844-31365863 | None:intergenic | 45.0% | |
| GCAGTAAAGGACTTCGCATT+TGG | - | chr2.4:31366136-31366155 | None:intergenic | 45.0% | |
| GCTGTTGAGTACAACCAGAT+TGG | - | chr2.4:31366029-31366048 | None:intergenic | 45.0% | |
| GGTGGAACCAAAGGAAAAGA+GGG | + | chr2.4:31366415-31366434 | MS.gene065865:CDS | 45.0% | |
| GGTTGTACTCAACAGCCTTA+TGG | + | chr2.4:31366033-31366052 | MS.gene065865:CDS | 45.0% | |
| GTGAAAATGGTCGAAATCCG+TGG | + | chr2.4:31366074-31366093 | MS.gene065865:CDS | 45.0% | |
| TGGTGGAACCAAAGGAAAAG+AGG | + | chr2.4:31366414-31366433 | MS.gene065865:CDS | 45.0% | |
| ! | AACAGCCTTATGGAGGTCTT+TGG | + | chr2.4:31366043-31366062 | MS.gene065865:CDS | 45.0% |
| ! | TCCTTTGGTTCCACCATCAA+GGG | - | chr2.4:31366410-31366429 | None:intergenic | 45.0% |
| ! | TGTACTCAACAGCCTTATGG+AGG | + | chr2.4:31366036-31366055 | MS.gene065865:CDS | 45.0% |
| ! | TTCCTTTGGTTCCACCATCA+AGG | - | chr2.4:31366411-31366430 | None:intergenic | 45.0% |
| !! | TACCTCATTTGGCTCTCTGA+TGG | + | chr2.4:31365928-31365947 | MS.gene065865:CDS | 45.0% |
| !!! | GGCTCTCTGATGGACTATTT+TGG | + | chr2.4:31365938-31365957 | MS.gene065865:CDS | 45.0% |
| GAACACAAACGTGCCCTTGA+TGG | + | chr2.4:31366394-31366413 | MS.gene065865:CDS | 50.0% | |
| GTCCATCAGAGAGCCAAATG+AGG | - | chr2.4:31365933-31365952 | None:intergenic | 50.0% | |
| ! | AGAAACCGAAGGGCTTGTTC+CGG | - | chr2.4:31365857-31365876 | None:intergenic | 50.0% |
| ! | CCACTGCCTTGTTAAGCAAC+CGG | + | chr2.4:31365835-31365854 | MS.gene065865:CDS | 50.0% |
| AGCAACCGGAACAAGCCCTT+CGG | + | chr2.4:31365849-31365868 | MS.gene065865:CDS | 55.0% | |
| CACAAACGTGCCCTTGATGG+TGG | + | chr2.4:31366397-31366416 | MS.gene065865:CDS | 55.0% | |
| CCGGTTGCTTAACAAGGCAG+TGG | - | chr2.4:31365838-31365857 | None:intergenic | 55.0% | |
| !! | GCCCTTGATGGTGGAACCAA+AGG | + | chr2.4:31366406-31366425 | MS.gene065865:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 31365779 | 31366456 | 31365779 | ID=MS.gene065865 |
| chr2.4 | mRNA | 31365779 | 31366456 | 31365779 | ID=MS.gene065865.t1;Parent=MS.gene065865 |
| chr2.4 | exon | 31365779 | 31366456 | 31365779 | ID=MS.gene065865.t1.exon1;Parent=MS.gene065865.t1 |
| chr2.4 | CDS | 31365779 | 31366456 | 31365779 | ID=cds.MS.gene065865.t1;Parent=MS.gene065865.t1 |
| Gene Sequence |
| Protein sequence |
