AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065989

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065989.t1 MTR_8g087890 93.664 363 9 1 1 349 1 363 0.0 686
MS.gene065989.t1 MTR_3g024510 71.389 360 86 4 6 349 12 370 0.0 525
MS.gene065989.t1 MTR_0565s0010 69.315 365 96 3 1 349 1 365 0.0 511
MS.gene065989.t1 MTR_3g005660 55.294 340 132 6 28 349 33 370 2.46e-120 352
MS.gene065989.t1 MTR_3g005650 50.708 353 153 8 12 349 11 357 1.93e-118 347
MS.gene065989.t1 MTR_8g087870 46.839 348 147 7 23 349 21 351 1.43e-102 306
MS.gene065989.t1 MTR_3g023220 46.884 337 151 7 27 348 29 352 1.01e-101 304
MS.gene065989.t1 MTR_2g017875 47.093 344 155 7 24 349 27 361 1.26e-101 304
MS.gene065989.t1 MTR_2g017955 45.777 367 170 8 3 348 1 359 1.88e-101 304
MS.gene065989.t1 MTR_2g017925 45.355 366 170 8 1 348 1 354 2.14e-100 301
MS.gene065989.t1 MTR_2g017965 46.197 355 165 9 12 348 14 360 3.93e-98 295
MS.gene065989.t1 MTR_4g035353 42.466 365 188 7 4 349 2 363 8.26e-98 294
MS.gene065989.t1 MTR_3g098270 42.049 371 183 8 7 348 1 368 3.59e-97 293
MS.gene065989.t1 MTR_2g017915 44.022 368 152 11 4 348 2 338 2.04e-93 283
MS.gene065989.t1 MTR_2g033930 37.950 361 203 7 5 348 6 362 2.40e-82 254
MS.gene065989.t1 MTR_2g033920 39.276 359 195 7 8 348 14 367 3.34e-80 249
MS.gene065989.t1 MTR_5g078210 43.574 319 155 10 33 332 27 339 2.92e-79 246
MS.gene065989.t1 MTR_4g122200 38.938 339 186 6 28 348 32 367 6.63e-76 238
MS.gene065989.t1 MTR_7g116500 35.262 363 215 7 4 349 6 365 1.67e-68 219
MS.gene065989.t1 MTR_7g116520 36.901 355 204 7 12 349 15 366 3.60e-68 218
MS.gene065989.t1 MTR_5g009100 36.145 332 193 6 33 347 48 377 5.53e-68 218
MS.gene065989.t1 MTR_7g116570 35.211 355 208 7 13 349 16 366 5.58e-67 215
MS.gene065989.t1 MTR_1g069175 35.537 363 212 7 6 349 8 367 7.96e-65 210
MS.gene065989.t1 MTR_2g018015 40.741 324 133 10 28 348 33 300 1.34e-64 207
MS.gene065989.t1 MTR_1g079540 37.539 317 177 7 32 330 32 345 2.59e-64 208
MS.gene065989.t1 MTR_8g079050 35.180 361 197 9 15 349 27 376 1.24e-63 207
MS.gene065989.t1 MTR_1g024890 36.858 331 187 8 32 344 33 359 2.77e-63 206
MS.gene065989.t1 MTR_1g025760 34.604 341 198 8 1 320 48 384 7.14e-63 206
MS.gene065989.t1 MTR_3g435540 36.873 339 184 10 10 326 3 333 9.20e-63 204
MS.gene065989.t1 MTR_7g116510 34.637 358 212 8 11 349 4 358 1.07e-62 204
MS.gene065989.t1 MTR_4g019880 35.312 337 196 8 32 349 33 366 2.80e-62 203
MS.gene065989.t1 MTR_3g052490 37.069 348 183 11 28 349 29 366 3.25e-62 203
MS.gene065989.t1 MTR_1g025720 35.465 344 194 9 1 320 1 340 1.71e-61 201
MS.gene065989.t1 MTR_4g108690 37.778 315 169 8 33 326 29 337 5.90e-61 199
MS.gene065989.t1 MTR_3g052480 36.290 372 198 12 6 349 8 368 8.22e-61 199
MS.gene065989.t1 MTR_5g093090 34.807 362 203 11 11 346 5 359 2.29e-59 195
MS.gene065989.t1 MTR_6g021530 35.714 336 190 8 11 325 9 339 5.03e-59 194
MS.gene065989.t1 MTR_2g017895 39.855 276 148 8 78 349 6 267 5.14e-59 191
MS.gene065989.t1 MTR_2g033920 39.860 286 151 6 8 276 14 295 2.75e-58 191
MS.gene065989.t1 MTR_1g025700 35.390 308 181 5 29 320 48 353 8.79e-58 191
MS.gene065989.t1 MTR_1g025780 34.146 328 198 7 7 319 18 342 1.11e-57 191
MS.gene065989.t1 MTR_5g078210 41.549 284 141 10 33 296 27 305 4.69e-57 188
MS.gene065989.t1 MTR_3g082830 35.737 319 180 8 28 326 35 348 4.16e-56 187
MS.gene065989.t1 MTR_4g056160 35.530 349 192 10 16 341 12 350 4.45e-56 186
MS.gene065989.t1 MTR_5g084750 34.132 334 197 8 12 326 11 340 1.17e-55 185
MS.gene065989.t1 MTR_1g079530 34.078 358 202 11 13 349 11 355 3.36e-55 184
MS.gene065989.t1 MTR_5g084790 35.503 338 187 10 12 327 15 343 6.27e-55 184
MS.gene065989.t1 MTR_2g017925 41.494 241 114 6 123 348 23 251 2.15e-54 179
MS.gene065989.t1 MTR_5g022640 33.333 345 205 9 6 327 14 356 4.17e-54 182
MS.gene065989.t1 MTR_7g008060 32.011 353 208 9 13 349 16 352 4.28e-54 181
MS.gene065989.t1 MTR_5g074270 36.624 314 178 10 33 327 35 346 6.32e-54 181
MS.gene065989.t1 MTR_1g025680 34.639 332 193 8 10 320 10 338 1.10e-53 183
MS.gene065989.t1 MTR_3g114090 34.118 340 195 10 6 320 5 340 1.12e-53 181
MS.gene065989.t1 MTR_2g084585 34.431 334 197 9 10 326 12 340 2.77e-53 179
MS.gene065989.t1 MTR_3g021460 33.696 368 205 10 1 348 1 349 3.71e-53 179
MS.gene065989.t1 MTR_3g052580 32.240 366 205 13 11 349 12 361 4.25e-53 180
MS.gene065989.t1 MTR_5g084770 33.333 339 204 9 7 326 4 339 4.69e-53 179
MS.gene065989.t1 MTR_4g056280 34.524 336 198 8 10 328 12 342 7.78e-53 178
MS.gene065989.t1 MTR_3g052580 32.240 366 205 13 11 349 11 360 8.65e-53 179
MS.gene065989.t1 MTR_8g074570 34.218 339 197 10 30 347 37 370 1.33e-52 178
MS.gene065989.t1 MTR_2g100620 37.231 325 172 12 26 326 26 342 1.42e-52 177
MS.gene065989.t1 MTR_8g014910 35.693 339 191 11 10 326 10 343 3.67e-52 176
MS.gene065989.t1 MTR_8g075230 34.203 345 198 10 6 326 7 346 6.50e-52 176
MS.gene065989.t1 MTR_3g114120 33.117 308 188 6 29 320 45 350 4.27e-51 174
MS.gene065989.t1 MTR_2g461580 32.337 368 210 11 1 348 1 349 9.01e-51 172
MS.gene065989.t1 MTR_5g022630 32.081 346 209 10 6 327 14 357 9.74e-50 170
MS.gene065989.t1 MTR_3g464730 32.456 342 207 9 6 326 1 339 1.91e-49 169
MS.gene065989.t1 MTR_2g015080 29.226 349 214 10 4 321 6 352 1.93e-49 170
MS.gene065989.t1 MTR_3g011860 70.536 112 28 1 201 307 212 323 1.02e-48 166
MS.gene065989.t1 MTR_0009s0250 32.659 346 197 13 10 334 10 340 1.07e-48 167
MS.gene065989.t1 MTR_8g075220 29.697 330 206 7 30 336 39 365 2.02e-47 164
MS.gene065989.t1 MTR_8g074560 31.152 382 214 11 1 348 1 367 6.96e-47 163
MS.gene065989.t1 MTR_8g075200 30.488 328 205 7 30 338 40 363 3.37e-46 162
MS.gene065989.t1 MTR_5g083040 32.188 320 193 7 28 325 29 346 6.40e-46 160
MS.gene065989.t1 MTR_4g087985 31.034 348 209 13 7 328 15 357 3.40e-45 158
MS.gene065989.t1 MTR_2g044100 34.951 309 174 10 33 319 45 348 6.11e-42 150
MS.gene065989.t1 MTR_8g022810 30.312 320 197 9 33 331 43 357 3.95e-40 145
MS.gene065989.t1 MTR_0127s0040 33.471 242 142 5 123 349 1 238 1.12e-39 140
MS.gene065989.t1 MTR_8g074580 29.095 409 215 13 8 347 15 417 2.35e-39 144
MS.gene065989.t1 MTR_8g031420 30.000 350 222 10 1 331 1 346 2.54e-39 143
MS.gene065989.t1 MTR_1g025910 30.671 313 190 7 36 332 41 342 6.09e-39 142
MS.gene065989.t1 MTR_8g031430 32.381 315 194 9 33 332 39 349 2.25e-38 140
MS.gene065989.t1 MTR_8g031390 29.859 355 217 11 1 331 1 347 3.05e-37 137
MS.gene065989.t1 MTR_8g031400 32.063 315 193 10 33 331 39 348 3.67e-37 137
MS.gene065989.t1 MTR_5g093090 34.014 294 162 10 11 278 5 292 3.70e-37 135
MS.gene065989.t1 MTR_8g022790 30.240 334 205 12 33 349 39 361 7.83e-34 128
MS.gene065989.t1 MTR_5g087690 28.280 343 202 10 33 348 52 377 9.13e-34 128
MS.gene065989.t1 MTR_1g030340 27.586 377 222 10 9 344 20 386 5.01e-33 127
MS.gene065989.t1 MTR_1g030268 27.966 354 216 10 7 325 13 362 3.39e-30 119
MS.gene065989.t1 MTR_1g030275 29.178 353 212 11 7 325 13 361 4.83e-30 118
MS.gene065989.t1 MTR_7g087190 27.606 355 215 10 28 344 40 390 2.62e-29 116
MS.gene065989.t1 MTR_8g031390 29.524 315 195 10 1 296 1 307 2.68e-29 115
MS.gene065989.t1 MTR_1108s0010 32.524 206 136 3 131 334 3 207 5.12e-28 109
MS.gene065989.t1 MTR_8g028160 27.027 333 199 9 33 327 38 364 2.02e-27 111
MS.gene065989.t1 MTR_1g079590 37.853 177 103 5 31 202 31 205 2.40e-27 107
MS.gene065989.t1 MTR_8g089805 27.671 365 212 12 6 328 16 370 2.97e-27 110
MS.gene065989.t1 MTR_2g087292 26.946 334 163 10 10 334 10 271 3.60e-27 108
MS.gene065989.t1 MTR_7g116870 25.000 372 231 11 7 340 9 370 2.28e-26 108
MS.gene065989.t1 MTR_8g022810 26.562 320 156 11 33 331 43 304 7.11e-26 105
MS.gene065989.t1 MTR_7g111780 27.761 335 206 10 22 332 29 351 1.00e-25 106
MS.gene065989.t1 MTR_5g074210 38.849 139 84 1 190 327 64 202 1.74e-25 102
MS.gene065989.t1 MTR_1g030230 25.806 372 236 10 7 342 6 373 1.79e-25 105
MS.gene065989.t1 MTR_6g007100 27.059 340 206 10 30 341 32 357 2.05e-25 105
MS.gene065989.t1 MTR_4g036375 38.323 167 94 5 26 188 25 186 9.28e-25 99.8
MS.gene065989.t1 MTR_2g015630 27.500 360 222 12 1 326 1 355 3.37e-24 102
MS.gene065989.t1 MTR_5g093090 39.306 173 89 6 11 169 5 175 6.74e-24 98.2
MS.gene065989.t1 MTR_4g104240 25.843 356 218 12 6 326 12 356 8.57e-24 101
MS.gene065989.t1 MTR_7g113860 26.389 360 216 11 30 349 28 378 1.11e-23 100
MS.gene065989.t1 MTR_3g463960 25.749 334 198 13 33 327 46 368 1.59e-23 100
MS.gene065989.t1 MTR_3g463950 25.749 334 198 13 33 327 46 368 1.59e-23 100
MS.gene065989.t1 MTR_3g463970 25.749 334 198 13 33 327 46 368 1.59e-23 100
MS.gene065989.t1 MTR_3g463940 25.749 334 198 13 33 327 46 368 1.59e-23 100
MS.gene065989.t1 MTR_7g033165 27.794 349 209 11 30 341 32 374 4.56e-23 99.4
MS.gene065989.t1 MTR_1g030220 28.529 333 188 11 33 325 42 364 9.83e-23 98.2
MS.gene065989.t1 MTR_6g007095 28.664 307 188 9 58 341 394 692 2.84e-22 98.6
MS.gene065989.t1 MTR_6g007095 27.195 353 200 13 30 341 40 376 1.91e-20 92.8
MS.gene065989.t1 MTR_3g463930 25.449 334 206 13 33 327 46 375 6.74e-22 95.9
MS.gene065989.t1 MTR_6g049220 51.087 92 41 2 26 113 25 116 9.21e-22 91.3
MS.gene065989.t1 MTR_2g043980 26.184 359 215 14 1 327 1 341 1.42e-21 94.7
MS.gene065989.t1 MTR_1g030268 27.797 295 184 8 7 276 13 303 1.66e-21 94.0
MS.gene065989.t1 MTR_7g113860 26.243 362 214 12 30 349 34 384 1.66e-21 94.7
MS.gene065989.t1 MTR_2g087190 55.422 83 12 1 217 299 89 146 6.38e-21 89.4
MS.gene065989.t1 MTR_2g079090 26.111 360 206 15 7 327 1 339 1.10e-20 92.0
MS.gene065989.t1 MTR_7g111780 29.630 189 116 4 160 331 63 251 1.22e-20 90.5
MS.gene065989.t1 MTR_6g007090 30.030 333 194 13 28 328 36 361 1.72e-20 91.7
MS.gene065989.t1 MTR_1g060490 26.367 311 188 14 33 321 39 330 5.60e-20 90.1
MS.gene065989.t1 MTR_1g030265 26.740 273 161 6 89 325 60 329 6.83e-20 89.7
MS.gene065989.t1 MTR_2g079080 25.833 360 207 15 7 327 1 339 1.21e-19 89.0
MS.gene065989.t1 MTR_7g033155 23.426 397 241 13 10 349 10 400 1.24e-19 89.7
MS.gene065989.t1 MTR_8g038680 27.171 357 218 11 13 331 6 358 1.55e-19 89.0
MS.gene065989.t1 MTR_0029s0050 25.698 358 208 14 7 327 3 339 1.70e-19 88.6
MS.gene065989.t1 MTR_1g082390 26.409 337 202 11 30 328 30 358 1.74e-19 89.0
MS.gene065989.t1 MTR_1g079570 31.111 135 91 2 210 344 4 136 2.04e-19 84.0
MS.gene065989.t1 MTR_7g033150 23.018 391 225 11 10 341 7 380 2.19e-19 88.6
MS.gene065989.t1 MTR_0029s0100 25.698 358 208 14 7 327 3 339 2.89e-19 88.2
MS.gene065989.t1 MTR_8g089805 25.899 278 164 8 92 328 26 302 5.05e-19 87.0
MS.gene065989.t1 MTR_1g060500 23.599 339 206 13 33 341 42 357 5.29e-19 87.4
MS.gene065989.t1 MTR_3g069780 25.926 324 207 12 33 327 32 351 1.22e-18 86.3
MS.gene065989.t1 MTR_3g438030 26.061 330 199 14 33 327 32 351 1.66e-18 85.9
MS.gene065989.t1 MTR_7g104220 28.053 303 194 12 33 321 44 336 6.67e-18 84.0
MS.gene065989.t1 MTR_2g015590 25.862 348 220 13 13 327 13 355 7.07e-18 84.3
MS.gene065989.t1 MTR_7g113860 25.714 280 174 7 103 349 32 310 1.10e-17 82.8
MS.gene065989.t1 MTR_1g092750 25.641 312 190 12 33 321 42 334 1.71e-16 80.1
MS.gene065989.t1 MTR_4g036385 34.862 109 70 1 225 332 22 130 4.39e-15 71.6
MS.gene065989.t1 MTR_3g448360 25.532 329 203 14 33 327 31 351 6.67e-15 75.5
MS.gene065989.t1 MTR_1g092760 26.899 316 180 14 33 321 41 332 6.72e-15 75.1
MS.gene065989.t1 MTR_1g092690 28.025 314 178 15 33 321 53 343 9.73e-15 74.7
MS.gene065989.t1 MTR_4g056220 29.630 162 99 3 174 334 38 185 1.42e-14 72.0
MS.gene065989.t1 MTR_3g069520 25.602 332 196 12 33 327 32 349 3.68e-14 73.2
MS.gene065989.t1 MTR_8g062580 34.615 104 66 2 225 327 76 178 4.20e-14 71.6
MS.gene065989.t1 MTR_8g012540 26.959 319 189 11 13 296 6 315 1.98e-13 70.9
MS.gene065989.t1 MTR_2g015670 25.382 327 193 13 33 327 33 340 3.82e-13 70.1
MS.gene065989.t1 MTR_2g015590 25.338 296 190 10 13 281 13 304 5.85e-13 69.3
MS.gene065989.t1 MTR_1g092740 24.149 323 202 13 33 332 40 342 4.68e-12 66.6
MS.gene065989.t1 MTR_5g062890 50.000 72 30 3 10 78 10 78 4.84e-12 62.0
MS.gene065989.t1 MTR_5g084880 37.931 87 54 0 190 276 26 112 6.69e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065989.t1 AT1G29670 65.027 366 110 3 1 349 67 431 6.97e-176 495
MS.gene065989.t1 AT1G29670 65.385 364 108 3 3 349 1 363 9.90e-176 492
MS.gene065989.t1 AT1G29660 65.352 355 109 1 9 349 10 364 4.71e-173 485
MS.gene065989.t1 AT5G45670 65.169 356 109 2 9 349 7 362 2.07e-172 484
MS.gene065989.t1 AT4G18970 69.617 339 88 2 26 349 23 361 4.50e-172 483
MS.gene065989.t1 AT4G18970 69.617 339 88 2 26 349 23 361 5.78e-171 482
MS.gene065989.t1 AT1G33811 50.402 373 158 8 1 349 1 370 3.20e-120 352
MS.gene065989.t1 AT1G71691 48.378 339 155 7 26 349 50 383 3.58e-108 321
MS.gene065989.t1 AT5G08460 44.658 365 178 7 6 349 24 385 2.00e-104 312
MS.gene065989.t1 AT5G15720 46.921 341 161 6 27 349 26 364 2.37e-102 306
MS.gene065989.t1 AT1G71250 43.733 359 181 7 9 349 18 373 2.95e-98 296
MS.gene065989.t1 AT2G19010 42.017 357 167 9 12 348 11 347 4.92e-90 274
MS.gene065989.t1 AT2G19010 43.402 341 153 9 28 348 57 377 1.43e-89 274
MS.gene065989.t1 AT2G19050 42.982 342 155 8 28 349 28 349 8.88e-87 265
MS.gene065989.t1 AT2G19060 40.974 349 167 9 3 331 6 335 1.18e-81 252
MS.gene065989.t1 AT4G30140 44.311 334 154 8 28 346 30 346 4.02e-81 251
MS.gene065989.t1 AT1G71691 43.662 284 141 6 80 349 4 282 8.62e-80 245
MS.gene065989.t1 AT1G71691 47.191 267 122 6 25 276 49 311 9.67e-74 231
MS.gene065989.t1 AT5G15720 42.708 288 145 6 80 349 48 333 2.25e-73 231
MS.gene065989.t1 AT5G37690 39.535 344 183 9 6 330 2 339 1.37e-72 229
MS.gene065989.t1 AT2G19050 44.906 265 116 5 28 277 28 277 1.08e-71 224
MS.gene065989.t1 AT5G15720 45.896 268 126 5 27 276 26 292 4.08e-71 224
MS.gene065989.t1 AT2G23540 38.484 343 180 8 33 349 50 387 1.63e-70 225
MS.gene065989.t1 AT5G33370 37.538 333 186 8 32 346 31 359 1.27e-68 219
MS.gene065989.t1 AT4G10950 35.588 340 198 6 27 348 67 403 1.35e-68 221
MS.gene065989.t1 AT5G37690 38.081 344 180 10 6 330 2 331 8.53e-68 217
MS.gene065989.t1 AT3G50400 36.723 354 198 9 20 349 23 374 1.93e-66 214
MS.gene065989.t1 AT4G10950 35.294 340 195 7 27 348 67 399 1.14e-65 213
MS.gene065989.t1 AT3G04290 35.988 339 191 9 27 344 23 356 2.29e-62 203
MS.gene065989.t1 AT4G28780 36.826 334 193 7 32 349 32 363 2.70e-61 201
MS.gene065989.t1 AT1G74460 36.578 339 185 12 10 326 3 333 2.97e-58 192
MS.gene065989.t1 AT5G41890 35.345 348 189 9 33 349 33 375 2.66e-57 190
MS.gene065989.t1 AT5G18430 34.579 321 191 5 32 334 29 348 5.91e-57 189
MS.gene065989.t1 AT2G04570 34.286 350 202 9 8 336 6 348 1.26e-56 188
MS.gene065989.t1 AT1G75880 34.969 326 193 8 20 327 41 365 1.35e-55 186
MS.gene065989.t1 AT1G75880 35.276 326 191 9 20 327 41 364 1.82e-55 186
MS.gene065989.t1 AT3G53100 36.278 317 179 7 29 326 27 339 2.69e-55 184
MS.gene065989.t1 AT5G55050 36.585 328 180 10 18 321 26 349 4.97e-55 184
MS.gene065989.t1 AT5G03820 34.857 350 198 10 3 326 28 373 1.95e-54 183
MS.gene065989.t1 AT1G06990 35.238 315 184 7 30 326 36 348 2.19e-54 182
MS.gene065989.t1 AT5G42170 33.439 314 193 6 29 328 48 359 2.36e-54 182
MS.gene065989.t1 AT5G03820 34.870 347 196 10 7 327 4 346 6.32e-54 181
MS.gene065989.t1 AT5G22810 33.333 351 205 10 1 326 1 347 1.11e-53 181
MS.gene065989.t1 AT2G42990 33.628 339 200 10 12 331 11 343 1.20e-53 180
MS.gene065989.t1 AT5G03810 35.484 341 195 9 7 326 5 341 3.41e-53 179
MS.gene065989.t1 AT4G26790 33.228 316 192 6 28 326 26 339 5.58e-53 178
MS.gene065989.t1 AT4G26790 33.228 316 192 6 28 326 26 339 5.58e-53 178
MS.gene065989.t1 AT1G75890 35.000 320 188 9 30 331 46 363 3.00e-52 177
MS.gene065989.t1 AT2G31540 35.000 320 187 9 25 325 29 346 3.00e-52 177
MS.gene065989.t1 AT1G75890 35.000 320 188 9 30 331 75 392 4.13e-52 177
MS.gene065989.t1 AT2G30310 33.718 347 200 11 9 327 8 352 1.16e-51 175
MS.gene065989.t1 AT1G58430 33.642 324 189 9 25 324 29 350 1.38e-51 175
MS.gene065989.t1 AT2G30220 33.718 347 199 11 9 327 8 351 1.93e-51 175
MS.gene065989.t1 AT3G16370 36.335 322 173 11 29 326 28 341 3.58e-51 174
MS.gene065989.t1 AT1G75900 33.333 318 192 9 20 319 30 345 2.61e-50 172
MS.gene065989.t1 AT1G20120 32.500 320 189 8 30 328 77 390 3.42e-50 172
MS.gene065989.t1 AT1G20132 33.228 316 182 7 26 319 56 364 4.55e-50 172
MS.gene065989.t1 AT2G24560 33.333 315 189 9 25 320 28 340 4.56e-50 171
MS.gene065989.t1 AT4G16230 41.256 223 113 3 25 230 24 245 1.38e-49 167
MS.gene065989.t1 AT1G75890 33.434 332 190 9 30 331 46 376 1.69e-49 170
MS.gene065989.t1 AT2G03980 33.642 324 190 10 30 334 42 359 2.43e-48 167
MS.gene065989.t1 AT2G03980 33.642 324 190 10 30 334 42 359 2.43e-48 167
MS.gene065989.t1 AT2G03980 33.642 324 190 10 30 334 42 359 2.43e-48 167
MS.gene065989.t1 AT2G03980 33.642 324 190 10 30 334 42 359 2.43e-48 167
MS.gene065989.t1 AT5G63170 33.548 310 173 9 28 319 25 319 3.29e-47 163
MS.gene065989.t1 AT5G33370 37.121 264 145 7 31 276 30 290 5.73e-47 162
MS.gene065989.t1 AT3G14820 32.704 318 189 10 29 328 30 340 7.08e-47 162
MS.gene065989.t1 AT1G73610 32.209 326 179 10 29 336 33 334 1.58e-46 161
MS.gene065989.t1 AT1G59406 31.672 341 204 11 7 326 5 337 2.13e-45 159
MS.gene065989.t1 AT1G59030 31.672 341 204 11 7 326 5 337 2.13e-45 159
MS.gene065989.t1 AT1G58725 31.672 341 204 11 7 326 5 337 2.13e-45 159
MS.gene065989.t1 AT5G45950 30.409 342 215 10 11 336 20 354 2.62e-44 156
MS.gene065989.t1 AT1G20130 31.343 335 182 9 29 332 182 499 8.70e-44 158
MS.gene065989.t1 AT1G20135 30.897 301 179 8 35 319 33 320 9.98e-44 154
MS.gene065989.t1 AT1G23500 33.121 314 185 9 29 328 33 335 1.57e-43 154
MS.gene065989.t1 AT1G20130 31.343 335 182 9 29 332 202 519 2.17e-43 157
MS.gene065989.t1 AT2G40250 29.091 330 211 7 27 335 32 359 5.79e-42 150
MS.gene065989.t1 AT1G75930 30.499 341 202 11 6 327 8 332 1.18e-39 143
MS.gene065989.t1 AT1G58520 30.218 321 193 10 24 326 23 330 1.60e-39 143
MS.gene065989.t1 AT1G58525 30.218 321 193 10 24 326 23 330 1.60e-39 143
MS.gene065989.t1 AT5G45960 28.846 312 199 9 29 319 45 354 2.14e-39 143
MS.gene065989.t1 AT1G75920 28.779 344 210 9 9 328 1 333 2.32e-38 140
MS.gene065989.t1 AT3G43570 28.783 337 191 9 6 326 5 308 1.01e-37 137
MS.gene065989.t1 AT1G53920 29.769 346 217 10 26 349 43 384 1.07e-37 139
MS.gene065989.t1 AT3G14225 30.294 340 209 10 33 349 39 373 1.20e-35 133
MS.gene065989.t1 AT3G14225 30.117 342 211 10 33 349 39 377 6.23e-35 131
MS.gene065989.t1 AT1G75920 28.012 332 195 9 30 328 23 343 3.10e-34 129
MS.gene065989.t1 AT2G24560 31.636 275 167 9 25 280 28 300 1.20e-33 127
MS.gene065989.t1 AT1G75910 28.198 344 212 9 9 328 1 333 1.29e-33 127
MS.gene065989.t1 AT1G71120 29.240 342 205 12 29 347 29 356 2.67e-33 127
MS.gene065989.t1 AT2G04020 39.130 207 109 6 30 222 42 245 2.46e-32 122
MS.gene065989.t1 AT5G40990 29.412 323 201 10 33 332 39 357 3.36e-31 121
MS.gene065989.t1 AT1G53940 30.091 329 189 11 33 331 41 358 9.20e-31 120
MS.gene065989.t1 AT2G04020 39.303 201 105 6 30 216 42 239 1.54e-30 118
MS.gene065989.t1 AT3G43550 29.655 290 177 9 6 276 5 286 8.50e-30 115
MS.gene065989.t1 AT3G05180 28.409 352 207 11 30 343 35 379 1.60e-28 114
MS.gene065989.t1 AT1G75920 26.023 342 191 9 9 328 1 302 1.61e-28 113
MS.gene065989.t1 AT1G75920 27.397 292 183 8 55 328 25 305 1.81e-28 112
MS.gene065989.t1 AT1G53990 27.616 344 206 11 33 349 37 364 2.09e-28 114
MS.gene065989.t1 AT4G16233 41.860 129 73 2 222 349 3 130 2.55e-28 107
MS.gene065989.t1 AT1G54020 26.536 358 227 11 6 346 8 346 4.38e-28 113
MS.gene065989.t1 AT1G56670 25.348 359 235 9 7 340 16 366 5.12e-26 107
MS.gene065989.t1 AT2G31550 29.327 208 132 5 135 328 2 208 1.01e-25 103
MS.gene065989.t1 AT3G48460 27.795 331 189 15 33 326 40 357 2.89e-25 105
MS.gene065989.t1 AT3G27950 26.989 352 218 11 10 328 8 353 6.43e-25 104
MS.gene065989.t1 AT1G31550 26.879 346 216 12 35 349 40 379 7.22e-25 104
MS.gene065989.t1 AT1G54790 24.932 365 229 10 7 333 8 365 8.55e-25 103
MS.gene065989.t1 AT1G54030 27.246 334 202 11 33 349 54 363 2.14e-24 103
MS.gene065989.t1 AT1G67830 27.859 341 193 12 28 325 27 357 4.44e-24 102
MS.gene065989.t1 AT4G01130 25.496 353 217 12 10 322 11 357 6.84e-24 101
MS.gene065989.t1 AT1G54000 25.205 365 230 11 8 346 7 354 1.10e-23 101
MS.gene065989.t1 AT1G28570 25.130 386 234 17 3 347 5 376 2.54e-23 100
MS.gene065989.t1 AT4G16220 49.533 107 50 2 9 113 10 114 3.25e-23 97.1
MS.gene065989.t1 AT1G54010 25.208 361 233 10 6 346 11 354 3.37e-23 99.8
MS.gene065989.t1 AT1G09390 26.269 335 216 9 30 340 36 363 4.70e-23 99.0
MS.gene065989.t1 AT1G28600 26.050 357 229 13 1 326 1 353 1.30e-22 98.2
MS.gene065989.t1 AT1G54790 24.796 367 231 10 7 333 3 364 1.75e-22 97.4
MS.gene065989.t1 AT1G28650 27.217 327 198 12 35 327 41 361 1.79e-22 97.4
MS.gene065989.t1 AT5G14450 26.902 368 226 13 12 341 20 382 2.78e-22 97.1
MS.gene065989.t1 AT3G14220 28.056 360 217 15 13 346 7 350 3.87e-22 96.3
MS.gene065989.t1 AT1G28580 25.382 327 204 12 35 327 41 361 8.18e-22 95.9
MS.gene065989.t1 AT1G31550 25.797 345 218 12 35 349 40 376 1.30e-21 95.1
MS.gene065989.t1 AT5G03610 27.445 317 181 14 33 321 45 340 1.08e-20 92.0
MS.gene065989.t1 AT5G45910 28.610 367 204 19 7 326 3 358 1.13e-20 92.4
MS.gene065989.t1 AT1G53940 29.478 268 154 10 33 276 41 297 2.33e-20 90.5
MS.gene065989.t1 AT1G28640 26.524 328 199 13 35 327 39 359 3.09e-20 91.3
MS.gene065989.t1 AT3G26430 26.776 366 210 14 12 328 5 361 3.40e-20 90.9
MS.gene065989.t1 AT3G14210 27.566 341 198 15 33 346 38 356 1.21e-19 89.7
MS.gene065989.t1 AT3G62280 25.846 325 204 10 28 326 33 346 2.16e-19 88.6
MS.gene065989.t1 AT1G28610 26.184 359 226 15 1 326 1 353 2.31e-19 88.6
MS.gene065989.t1 AT2G27360 25.231 325 208 12 35 327 37 358 4.55e-19 87.8
MS.gene065989.t1 AT1G28670 26.814 317 199 11 35 320 39 353 8.23e-19 87.0
MS.gene065989.t1 AT1G28660 26.627 338 185 14 35 327 39 358 9.90e-19 86.7
MS.gene065989.t1 AT1G28660 26.549 339 185 14 35 327 39 359 1.56e-18 86.3
MS.gene065989.t1 AT3G09930 25.559 313 193 12 33 321 41 337 2.53e-18 85.5
MS.gene065989.t1 AT3G09930 25.559 313 193 12 33 321 41 337 2.53e-18 85.5
MS.gene065989.t1 AT4G01130 25.170 294 187 10 10 276 11 298 1.02e-17 83.2
MS.gene065989.t1 AT1G54790 23.664 393 229 12 7 333 3 390 1.42e-17 83.6
MS.gene065989.t1 AT1G54020 25.090 279 174 10 84 346 1 260 7.18e-16 77.4
MS.gene065989.t1 AT1G54020 25.090 279 174 10 84 346 1 260 7.18e-16 77.4
MS.gene065989.t1 AT1G54020 25.090 279 174 10 84 346 1 260 7.18e-16 77.4
MS.gene065989.t1 AT5G03600 24.522 314 196 12 28 321 11 303 8.17e-16 77.8
MS.gene065989.t1 AT1G56670 24.483 290 191 7 7 276 16 297 8.90e-16 77.4
MS.gene065989.t1 AT5G03600 24.522 314 196 12 28 321 46 338 1.05e-15 77.8
MS.gene065989.t1 AT1G54020 27.317 205 134 6 155 346 9 211 2.11e-14 72.4
MS.gene065989.t1 AT4G01130 24.870 193 115 5 158 322 81 271 4.55e-14 72.4
MS.gene065989.t1 AT1G28600 28.889 180 114 6 1 170 1 176 1.63e-12 66.6
MS.gene065989.t1 AT3G62280 25.092 271 169 8 28 276 33 291 2.32e-11 64.3

Find 80 sgRNAs with CRISPR-Local

Find 153 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTTGCTGTTGAATATT+TGG 0.149733 4.3:-13170816 None:intergenic
CTCCTTGTAGCCAATATATT+TGG 0.164654 4.3:-13170751 None:intergenic
GTTCCTTGTTACTTCATATT+TGG 0.188601 4.3:+13168887 MS.gene065989:CDS
CTTCATATTTGGTGATTCTT+TGG 0.189419 4.3:+13168898 MS.gene065989:CDS
GCAAGGAAAATGGTACTATT+TGG 0.193855 4.3:+13170706 MS.gene065989:CDS
CAACAATGGTCTTCAATCTT+TGG 0.266111 4.3:+13168934 MS.gene065989:CDS
GTTATCTATGTAAATTCTTA+TGG 0.274377 4.3:+13170883 MS.gene065989:CDS
CTTAGAACTCTTTATAATAA+TGG 0.282837 4.3:+13170682 MS.gene065989:intron
ATAAGCAACCCTTCAGCTTA+TGG 0.283201 4.3:+13170922 MS.gene065989:CDS
CATAAACATGTTTGCATTGT+TGG 0.293332 4.3:+13168820 MS.gene065989:CDS
ACAGAAGAGAGTATTTGTTT+TGG 0.298948 4.3:+13171131 MS.gene065989:CDS
AGAGCTGATTACTTTCCTTA+TGG 0.305355 4.3:+13168959 MS.gene065989:CDS
CTATTTGGGATTGGTCAAAT+AGG 0.314934 4.3:+13170721 MS.gene065989:CDS
AGCAAGTGTATTTACTCAAT+TGG 0.316742 4.3:+13170544 MS.gene065989:CDS
ATAATTGACTCCTTTGAGTA+TGG 0.322702 4.3:-13170291 None:intergenic
CAAGGAAAATGGTACTATTT+GGG 0.330075 4.3:+13170707 MS.gene065989:CDS
TCCTTGTAGCCAATATATTT+GGG 0.330974 4.3:-13170750 None:intergenic
TAATAATGGAGCAAGGAAAA+TGG 0.350040 4.3:+13170696 MS.gene065989:CDS
TCCACACATGTTACGCCATC+CGG 0.350778 4.3:-13170775 None:intergenic
TTGTGCTTGGTTTGTTGAGT+GGG 0.361594 4.3:+13168846 MS.gene065989:CDS
GGTGATTCTTTGGTGGATAA+TGG 0.370098 4.3:+13168908 MS.gene065989:CDS
CCTTATGGAATTGACTTTGG+TGG 0.378784 4.3:+13168974 MS.gene065989:CDS
AATTTAACAGCTGAGCTATT+GGG 0.380127 4.3:+13170224 MS.gene065989:intron
CTTGGTTTGTTGAGTGGGGT+TGG 0.398393 4.3:+13168851 MS.gene065989:CDS
AGGCTGCAGCCCAAATATAT+TGG 0.400606 4.3:+13170741 MS.gene065989:CDS
TTTCCTTATGGAATTGACTT+TGG 0.406222 4.3:+13168971 MS.gene065989:CDS
GCACTTGGGCACTAAAACTA+AGG 0.408185 4.3:-13170450 None:intergenic
AAATTTAACAGCTGAGCTAT+TGG 0.411633 4.3:+13170223 MS.gene065989:intron
ATTGACTTTGGTGGACCTAC+TGG 0.426568 4.3:+13168983 MS.gene065989:CDS
GTGTATTTACTCAATTGGAT+TGG 0.426674 4.3:+13170549 MS.gene065989:CDS
GCTAAGTGGCTAATATCAAT+AGG 0.428046 4.3:-13171235 None:intergenic
GCATTGTTGGTTGTTGTGCT+TGG 0.430718 4.3:+13168833 MS.gene065989:CDS
TGCTTTGGTAATTCTGCACT+TGG 0.435688 4.3:-13170465 None:intergenic
TGTATTTACTCAATTGGATT+GGG 0.440503 4.3:+13170550 MS.gene065989:CDS
CTACTTGTGACACAGTGCTT+TGG 0.442326 4.3:-13170480 None:intergenic
AATTATGCTTCTGCAGCAGC+TGG 0.464686 4.3:+13170308 MS.gene065989:CDS
CATATTTGGTGATTCTTTGG+TGG 0.471586 4.3:+13168901 MS.gene065989:CDS
AAAACCACTGTTGATGCAAT+TGG 0.478051 4.3:+13169022 MS.gene065989:CDS
AGATCATCAGCATACTCATC+TGG 0.478200 4.3:-13170637 None:intergenic
GCTGGAATTAGAGAGGAAAC+TGG 0.486290 4.3:+13170326 MS.gene065989:CDS
AAAATGGTACTATTTGGGAT+TGG 0.509987 4.3:+13170712 MS.gene065989:CDS
CCACCAAAGTCAATTCCATA+AGG 0.510808 4.3:-13168974 None:intergenic
TCAATAGGATAAGCATCCTC+TGG 0.512358 4.3:-13171220 None:intergenic
ATGCCTCAATTCTATAGCAC+AGG 0.522685 4.3:+13170601 MS.gene065989:CDS
ATTAAATTACCATAAGCTGA+AGG 0.527446 4.3:-13170931 None:intergenic
ATGAAGTAACAAGGAACTTG+TGG 0.528070 4.3:-13168881 None:intergenic
GTTGTGCTTGGTTTGTTGAG+TGG 0.531237 4.3:+13168845 MS.gene065989:CDS
GCCCAAATATATTGGCTACA+AGG 0.535288 4.3:+13170749 MS.gene065989:CDS
TTCTCACATGGTGTTTGCAA+TGG 0.539683 4.3:-13171109 None:intergenic
TCACAAGTAGTGAATATACT+AGG 0.545333 4.3:+13170493 MS.gene065989:CDS
TTAAATTACCATAAGCTGAA+GGG 0.562936 4.3:-13170930 None:intergenic
TGTGCTTGGTTTGTTGAGTG+GGG 0.564540 4.3:+13168847 MS.gene065989:CDS
CCACACATGTTACGCCATCC+GGG 0.567099 4.3:-13170774 None:intergenic
ATCATCACTAGCAGATGCAT+AGG 0.567991 4.3:-13170267 None:intergenic
TATATTGGCTACAAGGAGCC+CGG 0.568733 4.3:+13170756 MS.gene065989:CDS
GCTTTGGTAATTCTGCACTT+GGG 0.580136 4.3:-13170464 None:intergenic
CCCGGATGGCGTAACATGTG+TGG 0.590019 4.3:+13170774 MS.gene065989:CDS
AGTGATGATGCCATACTCAA+AGG 0.595556 4.3:+13170281 MS.gene065989:CDS
AATGCTGGATGCTGTGGAGT+AGG 0.598356 4.3:+13171058 MS.gene065989:CDS
GTTACAAATGCTGGATGCTG+TGG 0.599550 4.3:+13171052 MS.gene065989:CDS
TAGATCAGAGCTGAGCTAAG+TGG 0.600707 4.3:-13171249 None:intergenic
CCATTGGAAAACCTTCCAGT+AGG 0.600738 4.3:-13168998 None:intergenic
GTGGATAATGGTAACAACAA+TGG 0.606722 4.3:+13168920 MS.gene065989:CDS
ACTTTGGTGGACCTACTGGA+AGG 0.612651 4.3:+13168987 MS.gene065989:CDS
TACTCTCTTCTGTTCTCACA+TGG 0.612707 4.3:-13171121 None:intergenic
TCATCACTAGCAGATGCATA+GGG 0.614085 4.3:-13170266 None:intergenic
CTCTTTATAATAATGGAGCA+AGG 0.616381 4.3:+13170689 MS.gene065989:CDS
ACTACATTTCCAGCTTCAGT+CGG 0.632841 4.3:-13171166 None:intergenic
TGCAGCAGCTGGAATTAGAG+AGG 0.635095 4.3:+13170319 MS.gene065989:CDS
CTGGATGCTGTGGAGTAGGA+AGG 0.636608 4.3:+13171062 MS.gene065989:CDS
TTGGCTACAAGGAGCCCGGA+TGG 0.639850 4.3:+13170760 MS.gene065989:CDS
CTTACCAATTGCATCAACAG+TGG 0.640720 4.3:-13169026 None:intergenic
ATATTCAACAGCAAATTGAA+AGG 0.643543 4.3:+13170820 MS.gene065989:CDS
GTGCCTGTGCTATAGAATTG+AGG 0.644555 4.3:-13170604 None:intergenic
TCACTAGCAGATGCATAGGG+TGG 0.661781 4.3:-13170263 None:intergenic
TTACAGTGCTCAATCTCCAG+AGG 0.662313 4.3:+13171204 MS.gene065989:CDS
AGTGAATATACTAGGAACTG+AGG 0.666217 4.3:+13170501 MS.gene065989:CDS
TCACCAAATATGAAGTAACA+AGG 0.672914 4.3:-13168890 None:intergenic
GAATTAGAGAGGAAACTGGA+CGG 0.701371 4.3:+13170330 MS.gene065989:CDS
TGTGGAGTAGGAAGGAACAA+TGG 0.715337 4.3:+13171070 MS.gene065989:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGATTTTTTTTTTTTTTTG+AGG + chr4.3:13170123-13170142 MS.gene065989:intron 10.0%
!! AAGATCAATTAAAACAATTA+AGG + chr4.3:13169705-13169724 MS.gene065989:intron 15.0%
!! AATTAAATTTGATGTCAATA+AGG - chr4.3:13171019-13171038 None:intergenic 15.0%
!! AGATCAATTAAAACAATTAA+GGG + chr4.3:13169706-13169725 MS.gene065989:intron 15.0%
!! ATAAAATAAAAGAAAAGCAA+AGG - chr4.3:13169054-13169073 None:intergenic 15.0%
!! ATATTATGATTTCACTATTA+AGG - chr4.3:13169828-13169847 None:intergenic 15.0%
!! TAAAATAAAAGAAAAGCAAA+GGG - chr4.3:13169053-13169072 None:intergenic 15.0%
!!! AATATGTTCTAAATATTTGT+AGG + chr4.3:13170420-13170439 MS.gene065989:intron 15.0%
!!! ATATGTTCTAAATATTTGTA+GGG + chr4.3:13170421-13170440 MS.gene065989:intron 15.0%
!!! ATGAAATTCAAATCTTTTTT+AGG + chr4.3:13169436-13169455 MS.gene065989:intron 15.0%
!!! TAAGTATTTTATGAAAAGTT+GGG + chr4.3:13169775-13169794 MS.gene065989:intron 15.0%
!!! TTAAATTTGTTATATTTCAC+TGG + chr4.3:13169230-13169249 MS.gene065989:intron 15.0%
!! AATGGTCAAAATTATAGAAA+TGG - chr4.3:13169598-13169617 None:intergenic 20.0%
!! CTTAGAACTCTTTATAATAA+TGG + chr4.3:13170682-13170701 MS.gene065989:intron 20.0%
!! GTTATCTATGTAAATTCTTA+TGG + chr4.3:13170883-13170902 MS.gene065989:CDS 20.0%
!!! AATTCAAATCTTTTTTAGGA+TGG + chr4.3:13169440-13169459 MS.gene065989:intron 20.0%
!!! ATTTAATACAGTTTTGACAA+AGG + chr4.3:13169984-13170003 MS.gene065989:intron 20.0%
!!! GTAAGTATTTTATGAAAAGT+TGG + chr4.3:13169774-13169793 MS.gene065989:intron 20.0%
!!! TGACATCAAATTTAATTTTC+AGG + chr4.3:13171022-13171041 MS.gene065989:intron 20.0%
! AAACAAACACAAGATTTAAG+TGG + chr4.3:13170079-13170098 MS.gene065989:intron 25.0%
! AACAAACACAAGATTTAAGT+GGG + chr4.3:13170080-13170099 MS.gene065989:intron 25.0%
! AGATCAAAATGATGTCTTAT+GGG + chr4.3:13169642-13169661 MS.gene065989:intron 25.0%
! ATATTCAACAGCAAATTGAA+AGG + chr4.3:13170820-13170839 MS.gene065989:CDS 25.0%
! ATGTGACTAGAAAAATGTTA+AGG - chr4.3:13170963-13170982 None:intergenic 25.0%
! ATTAAATTACCATAAGCTGA+AGG - chr4.3:13170934-13170953 None:intergenic 25.0%
! ATTGAAGATTTGGCTAAAAT+AGG - chr4.3:13169538-13169557 None:intergenic 25.0%
! TAGATCAAAATGATGTCTTA+TGG + chr4.3:13169641-13169660 MS.gene065989:intron 25.0%
! TGTATTTACTCAATTGGATT+GGG + chr4.3:13170550-13170569 MS.gene065989:CDS 25.0%
! TTAAATTACCATAAGCTGAA+GGG - chr4.3:13170933-13170952 None:intergenic 25.0%
! TTCTAGGTAGTTAAAATAAC+TGG - chr4.3:13169360-13169379 None:intergenic 25.0%
! TTGAAGATTTGGCTAAAATA+GGG - chr4.3:13169537-13169556 None:intergenic 25.0%
!! ACATAGATAACTTTTGAATC+AGG - chr4.3:13170874-13170893 None:intergenic 25.0%
!! TCTACCAGTATAATTTTAGA+CGG - chr4.3:13169193-13169212 None:intergenic 25.0%
!! TTTAGCCAAATCTTCAATTT+TGG + chr4.3:13169540-13169559 MS.gene065989:intron 25.0%
!!! TCAATTTGCTGTTGAATATT+TGG - chr4.3:13170819-13170838 None:intergenic 25.0%
AAATTTAACAGCTGAGCTAT+TGG + chr4.3:13170223-13170242 MS.gene065989:intron 30.0%
AAGCGTTTGAATTTGTAACA+GGG + chr4.3:13169413-13169432 MS.gene065989:intron 30.0%
AATTTAACAGCTGAGCTATT+GGG + chr4.3:13170224-13170243 MS.gene065989:intron 30.0%
AGCAAGTGTATTTACTCAAT+TGG + chr4.3:13170544-13170563 MS.gene065989:CDS 30.0%
AGGTAGTTAAAATAACTGGA+GGG - chr4.3:13169356-13169375 None:intergenic 30.0%
ATTGCCAATTAGAAATAGAG+TGG - chr4.3:13169566-13169585 None:intergenic 30.0%
ATTTCATGGATCATGTTTCT+AGG - chr4.3:13169376-13169395 None:intergenic 30.0%
CAAGGAAAATGGTACTATTT+GGG + chr4.3:13170707-13170726 MS.gene065989:CDS 30.0%
CATAAACATGTTTGCATTGT+TGG + chr4.3:13168820-13168839 MS.gene065989:CDS 30.0%
CCTATTACTATCAATTAGAG+TGG - chr4.3:13169495-13169514 None:intergenic 30.0%
CTAAAATTATACTGGTAGAG+TGG + chr4.3:13169194-13169213 MS.gene065989:intron 30.0%
GATCAAAATGATGTCTTATG+GGG + chr4.3:13169643-13169662 MS.gene065989:intron 30.0%
GCATGCACTTGTATATTATA+TGG + chr4.3:13169097-13169116 MS.gene065989:intron 30.0%
GTGTATTTACTCAATTGGAT+TGG + chr4.3:13170549-13170568 MS.gene065989:CDS 30.0%
TAGGTAGTTAAAATAACTGG+AGG - chr4.3:13169357-13169376 None:intergenic 30.0%
TCACAAGTAGTGAATATACT+AGG + chr4.3:13170493-13170512 MS.gene065989:CDS 30.0%
TCACCAAATATGAAGTAACA+AGG - chr4.3:13168893-13168912 None:intergenic 30.0%
TCCTTGTAGCCAATATATTT+GGG - chr4.3:13170753-13170772 None:intergenic 30.0%
TTGTCACATCATCAATTGAA+TGG - chr4.3:13169616-13169635 None:intergenic 30.0%
! AAAATGGTACTATTTGGGAT+TGG + chr4.3:13170712-13170731 MS.gene065989:CDS 30.0%
! ATAATTGACTCCTTTGAGTA+TGG - chr4.3:13170294-13170313 None:intergenic 30.0%
! ATCAGTACTTCTGGTAATTT+TGG - chr4.3:13170050-13170069 None:intergenic 30.0%
! CCACTCTAATTGATAGTAAT+AGG + chr4.3:13169492-13169511 MS.gene065989:intron 30.0%
! CTAACCGTCTAAAATTATAC+TGG + chr4.3:13169186-13169205 MS.gene065989:intron 30.0%
! CTCTTTATAATAATGGAGCA+AGG + chr4.3:13170689-13170708 MS.gene065989:CDS 30.0%
! CTTCATATTTGGTGATTCTT+TGG + chr4.3:13168898-13168917 MS.gene065989:CDS 30.0%
! GTTCCTTGTTACTTCATATT+TGG + chr4.3:13168887-13168906 MS.gene065989:CDS 30.0%
! TAATAATGGAGCAAGGAAAA+TGG + chr4.3:13170696-13170715 MS.gene065989:CDS 30.0%
! TTTCCTTATGGAATTGACTT+TGG + chr4.3:13168971-13168990 MS.gene065989:CDS 30.0%
!! AATTACCAGAAGTACTGATT+CGG + chr4.3:13170051-13170070 MS.gene065989:intron 30.0%
!!! ACAGAAGAGAGTATTTGTTT+TGG + chr4.3:13171131-13171150 MS.gene065989:CDS 30.0%
!!! CAGAAGAGAGTATTTGTTTT+GGG + chr4.3:13171132-13171151 MS.gene065989:CDS 30.0%
!!! TCAAATCTTTTTTAGGATGG+TGG + chr4.3:13169443-13169462 MS.gene065989:intron 30.0%
AAAAAAACCACCTAGAAGCA+TGG + chr4.3:13169801-13169820 MS.gene065989:intron 35.0%
AAAACCACTGTTGATGCAAT+TGG + chr4.3:13169022-13169041 MS.gene065989:CDS 35.0%
AGAGCTGATTACTTTCCTTA+TGG + chr4.3:13168959-13168978 MS.gene065989:CDS 35.0%
AGTGAATATACTAGGAACTG+AGG + chr4.3:13170501-13170520 MS.gene065989:CDS 35.0%
AGTGGCCAAAATTGAAGATT+TGG - chr4.3:13169548-13169567 None:intergenic 35.0%
ATGAAGTAACAAGGAACTTG+TGG - chr4.3:13168884-13168903 None:intergenic 35.0%
CAACAATGGTCTTCAATCTT+TGG + chr4.3:13168934-13168953 MS.gene065989:CDS 35.0%
CAAGCGTTTGAATTTGTAAC+AGG + chr4.3:13169412-13169431 MS.gene065989:intron 35.0%
CTCCTTGTAGCCAATATATT+TGG - chr4.3:13170754-13170773 None:intergenic 35.0%
GCAAGGAAAATGGTACTATT+TGG + chr4.3:13170706-13170725 MS.gene065989:CDS 35.0%
GCTAAGTGGCTAATATCAAT+AGG - chr4.3:13171238-13171257 None:intergenic 35.0%
TACTGTTGTCTAACTAACTG+TGG + chr4.3:13170200-13170219 MS.gene065989:intron 35.0%
! ATCAACAGTGGTTTTTCCAT+TGG - chr4.3:13169017-13169036 None:intergenic 35.0%
! ATGGAATGGAATTTAAAGCC+CGG - chr4.3:13169925-13169944 None:intergenic 35.0%
! CATATTTGGTGATTCTTTGG+TGG + chr4.3:13168901-13168920 MS.gene065989:CDS 35.0%
! CTGGTAATTTTGGATCTCTT+TGG - chr4.3:13170040-13170059 None:intergenic 35.0%
! GTGGATAATGGTAACAACAA+TGG + chr4.3:13168920-13168939 MS.gene065989:CDS 35.0%
! TAACTTTTGAATCAGGAAGC+TGG - chr4.3:13170867-13170886 None:intergenic 35.0%
! TTTTACCGAATCAGTACTTC+TGG - chr4.3:13170059-13170078 None:intergenic 35.0%
!! CTATTTGGGATTGGTCAAAT+AGG + chr4.3:13170721-13170740 MS.gene065989:CDS 35.0%
!! GGTTTTAGTGTTACAAATGC+TGG + chr4.3:13171043-13171062 MS.gene065989:intron 35.0%
!! TTGGCCACTCTATTTCTAAT+TGG + chr4.3:13169559-13169578 MS.gene065989:intron 35.0%
ACAGAACCATGTGAATGGAA+TGG - chr4.3:13169944-13169963 None:intergenic 40.0%
ACCAAACAGAACCATGTGAA+TGG - chr4.3:13169949-13169968 None:intergenic 40.0%
ACCATGTGAATGGAATGGAA+TGG - chr4.3:13169939-13169958 None:intergenic 40.0%
ACTACATTTCCAGCTTCAGT+CGG - chr4.3:13171169-13171188 None:intergenic 40.0%
AGATCATCAGCATACTCATC+TGG - chr4.3:13170640-13170659 None:intergenic 40.0%
ATAAGCAACCCTTCAGCTTA+TGG + chr4.3:13170922-13170941 MS.gene065989:CDS 40.0%
ATAGAGCTGCTGACATTTCA+TGG - chr4.3:13169390-13169409 None:intergenic 40.0%
ATCATCACTAGCAGATGCAT+AGG - chr4.3:13170270-13170289 None:intergenic 40.0%
ATGAGTGTGAATCTTGTGAC+CGG + chr4.3:13169903-13169922 MS.gene065989:intron 40.0%
ATGCCTCAATTCTATAGCAC+AGG + chr4.3:13170601-13170620 MS.gene065989:CDS 40.0%
CAAGATTCACACTCATCAAG+AGG - chr4.3:13169899-13169918 None:intergenic 40.0%
CCACCAAAGTCAATTCCATA+AGG - chr4.3:13168977-13168996 None:intergenic 40.0%
CTATTAAGGACCATGCTTCT+AGG - chr4.3:13169814-13169833 None:intergenic 40.0%
CTTACCAATTGCATCAACAG+TGG - chr4.3:13169029-13169048 None:intergenic 40.0%
GAATTAGAGAGGAAACTGGA+CGG + chr4.3:13170330-13170349 MS.gene065989:CDS 40.0%
TACTCTCTTCTGTTCTCACA+TGG - chr4.3:13171124-13171143 None:intergenic 40.0%
TCAATAGGATAAGCATCCTC+TGG - chr4.3:13171223-13171242 None:intergenic 40.0%
TCATCACTAGCAGATGCATA+GGG - chr4.3:13170269-13170288 None:intergenic 40.0%
TCCATTCCATTCCATTCACA+TGG + chr4.3:13169935-13169954 MS.gene065989:intron 40.0%
TTCTCACATGGTGTTTGCAA+TGG - chr4.3:13171112-13171131 None:intergenic 40.0%
! AGTGATGATGCCATACTCAA+AGG + chr4.3:13170281-13170300 MS.gene065989:CDS 40.0%
! CCTTATGGAATTGACTTTGG+TGG + chr4.3:13168974-13168993 MS.gene065989:CDS 40.0%
! GCCCAAATATATTGGCTACA+AGG + chr4.3:13170749-13170768 MS.gene065989:CDS 40.0%
! GCTTTGGTAATTCTGCACTT+GGG - chr4.3:13170467-13170486 None:intergenic 40.0%
! GGTGATTCTTTGGTGGATAA+TGG + chr4.3:13168908-13168927 MS.gene065989:CDS 40.0%
! TCCATTCACATGGTTCTGTT+TGG + chr4.3:13169945-13169964 MS.gene065989:intron 40.0%
! TGCTTTGGTAATTCTGCACT+TGG - chr4.3:13170468-13170487 None:intergenic 40.0%
!! TAAAGTGCTTAAAGAGTGCC+CGG - chr4.3:13169750-13169769 None:intergenic 40.0%
!! TTGTGCTTGGTTTGTTGAGT+GGG + chr4.3:13168846-13168865 MS.gene065989:CDS 40.0%
AATTATGCTTCTGCAGCAGC+TGG + chr4.3:13170308-13170327 MS.gene065989:CDS 45.0%
AGGCTGCAGCCCAAATATAT+TGG + chr4.3:13170741-13170760 MS.gene065989:CDS 45.0%
CCATTGGAAAACCTTCCAGT+AGG - chr4.3:13169001-13169020 None:intergenic 45.0%
CTACTTGTGACACAGTGCTT+TGG - chr4.3:13170483-13170502 None:intergenic 45.0%
GCACTTGGGCACTAAAACTA+AGG - chr4.3:13170453-13170472 None:intergenic 45.0%
GCTGGAATTAGAGAGGAAAC+TGG + chr4.3:13170326-13170345 MS.gene065989:CDS 45.0%
GTGCCTGTGCTATAGAATTG+AGG - chr4.3:13170607-13170626 None:intergenic 45.0%
GTTACAAATGCTGGATGCTG+TGG + chr4.3:13171052-13171071 MS.gene065989:CDS 45.0%
TGAGTGTGAATCTTGTGACC+GGG + chr4.3:13169904-13169923 MS.gene065989:intron 45.0%
TGTGGAGTAGGAAGGAACAA+TGG + chr4.3:13171070-13171089 MS.gene065989:CDS 45.0%
TTAAGGACCATGCTTCTAGG+TGG - chr4.3:13169811-13169830 None:intergenic 45.0%
TTACAGTGCTCAATCTCCAG+AGG + chr4.3:13171204-13171223 MS.gene065989:CDS 45.0%
! ATTGACTTTGGTGGACCTAC+TGG + chr4.3:13168983-13169002 MS.gene065989:CDS 45.0%
! CCTACTGGAAGGTTTTCCAA+TGG + chr4.3:13168998-13169017 MS.gene065989:CDS 45.0%
! GCATTGTTGGTTGTTGTGCT+TGG + chr4.3:13168833-13168852 MS.gene065989:CDS 45.0%
! TATATTGGCTACAAGGAGCC+CGG + chr4.3:13170756-13170775 MS.gene065989:CDS 45.0%
!! AAAGTGCTTAAAGAGTGCCC+GGG - chr4.3:13169749-13169768 None:intergenic 45.0%
!! GTTGTGCTTGGTTTGTTGAG+TGG + chr4.3:13168845-13168864 MS.gene065989:CDS 45.0%
!! TGTGCTTGGTTTGTTGAGTG+GGG + chr4.3:13168847-13168866 MS.gene065989:CDS 45.0%
AAATGTTAACGAGTGCCCCC+GGG + chr4.3:13169729-13169748 MS.gene065989:intron 50.0%
AATGCTGGATGCTGTGGAGT+AGG + chr4.3:13171058-13171077 MS.gene065989:CDS 50.0%
GAAATGTTAACGAGTGCCCC+CGG + chr4.3:13169728-13169747 MS.gene065989:intron 50.0%
TCACTAGCAGATGCATAGGG+TGG - chr4.3:13170266-13170285 None:intergenic 50.0%
TCCACACATGTTACGCCATC+CGG - chr4.3:13170778-13170797 None:intergenic 50.0%
TGCAGCAGCTGGAATTAGAG+AGG + chr4.3:13170319-13170338 MS.gene065989:CDS 50.0%
! ACTTTGGTGGACCTACTGGA+AGG + chr4.3:13168987-13169006 MS.gene065989:CDS 50.0%
! GCTTTTCATCCGACTGAAGC+TGG + chr4.3:13171157-13171176 MS.gene065989:CDS 50.0%
!! AAGTGCTTAAAGAGTGCCCG+GGG - chr4.3:13169748-13169767 None:intergenic 50.0%
!! CTTGGTTTGTTGAGTGGGGT+TGG + chr4.3:13168851-13168870 MS.gene065989:CDS 50.0%
CCACACATGTTACGCCATCC+GGG - chr4.3:13170777-13170796 None:intergenic 55.0%
CTGGATGCTGTGGAGTAGGA+AGG + chr4.3:13171062-13171081 MS.gene065989:CDS 55.0%
!! AGTGCTTAAAGAGTGCCCGG+GGG - chr4.3:13169747-13169766 None:intergenic 55.0%
CCCGGATGGCGTAACATGTG+TGG + chr4.3:13170774-13170793 MS.gene065989:CDS 60.0%
TTGGCTACAAGGAGCCCGGA+TGG + chr4.3:13170760-13170779 MS.gene065989:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 13168803 13171267 13168803 ID=MS.gene065989
chr4.3 mRNA 13168803 13171267 13168803 ID=MS.gene065989.t1;Parent=MS.gene065989
chr4.3 exon 13168803 13169043 13168803 ID=MS.gene065989.t1.exon1;Parent=MS.gene065989.t1
chr4.3 CDS 13168803 13169043 13168803 ID=cds.MS.gene065989.t1;Parent=MS.gene065989.t1
chr4.3 exon 13170234 13170358 13170234 ID=MS.gene065989.t1.exon2;Parent=MS.gene065989.t1
chr4.3 CDS 13170234 13170358 13170234 ID=cds.MS.gene065989.t1;Parent=MS.gene065989.t1
chr4.3 exon 13170442 13170644 13170442 ID=MS.gene065989.t1.exon3;Parent=MS.gene065989.t1
chr4.3 CDS 13170442 13170644 13170442 ID=cds.MS.gene065989.t1;Parent=MS.gene065989.t1
chr4.3 exon 13170687 13170943 13170687 ID=MS.gene065989.t1.exon4;Parent=MS.gene065989.t1
chr4.3 CDS 13170687 13170943 13170687 ID=cds.MS.gene065989.t1;Parent=MS.gene065989.t1
chr4.3 exon 13171044 13171267 13171044 ID=MS.gene065989.t1.exon5;Parent=MS.gene065989.t1
chr4.3 CDS 13171044 13171267 13171044 ID=cds.MS.gene065989.t1;Parent=MS.gene065989.t1
Gene Sequence

>MS.gene065989

ATGGCATTTGAGGATGTCATAAACATGTTTGCATTGTTGGTTGTTGTGCTTGGTTTGTTGAGTGGGGTTGGAGCTGATCCACAAGTTCCTTGTTACTTCATATTTGGTGATTCTTTGGTGGATAATGGTAACAACAATGGTCTTCAATCTTTGGCTAGAGCTGATTACTTTCCTTATGGAATTGACTTTGGTGGACCTACTGGAAGGTTTTCCAATGGAAAAACCACTGTTGATGCAATTGGTAAGACCCTTTGCTTTTCTTTTATTTTATTTTCTTAAACATTAAATATATATGCATGCACTTGTATATTATATGGTCTTAATTCTTAAACTAGTTGCACTTGCATGCACATGAAATAATCATAATTGTCAAAATCATTTATCTAACCGTCTAAAATTATACTGGTAGAGTGGTAGTATTTTGTTTTTAAATTTGTTATATTTCACTGGCTTTCAGTTGATCAGATAAGCATCTAAATCTAAATATTATGCACTTATTTTAATGTTCAAATGAATGTCAATTTATTATGATAAATTCAGAAAATAAATTCCCTCCAGTTATTTTAACTACCTAGAAACATGATCCATGAAATGTCAGCAGCTCTATAGCAAGCGTTTGAATTTGTAACAGGGATGAAATTCAAATCTTTTTTAGGATGGTGGTTAAATAGTACTAGTAATGCTTAATACCACTCTAATTGATAGTAATAGGCTTAATTGAAGTTTTGATTCCCTATTTTAGCCAAATCTTCAATTTTGGCCACTCTATTTCTAATTGGCAATTTTGATTATCCATTTCTATAATTTTGACCATTCAATTGATGATGTGACAATAAATTAGATCAAAATGATGTCTTATGGGGTGTTAAATTAAGTCGTGACTAATCATAGAAAATTAAAATAAGATCAATTAAAACAATTAAGGGAAATGTTAACGAGTGCCCCCGGGCACTCTTTAAGCACTTTAAATAGTAAGTATTTTATGAAAAGTTGGGTAAAAAAAAACCACCTAGAAGCATGGTCCTTAATAGTGAAATCATAATATAGCATGCACAGAACTAAAACAGAATCATGATGCTAGTACTCTACTACACCTCTTGATGAGTGTGAATCTTGTGACCGGGCTTTAAATTCCATTCCATTCCATTCACATGGTTCTGTTTGGTAGCATTAAATATGCAATTTAATACAGTTTTGACAAAGGTAAAGTGCATCATGAGACATAAATTAACTGCCAAAGAGATCCAAAATTACCAGAAGTACTGATTCGGTAAAAAAACAAACACAAGATTTAAGTGGGACATATTCTTGCATATAATATTGATTTTTTTTTTTTTTTGAGGAATGCATATAGTATTGATTGTTTCACATCTTGTAAATGCACAGTAAACTTCTTTTACTGTTGTCTAACTAACTGTGGAAATTTAACAGCTGAGCTATTGGGATTCGATGATTATATTCCACCCTATGCATCTGCTAGTGATGATGCCATACTCAAAGGAGTCAATTATGCTTCTGCAGCAGCTGGAATTAGAGAGGAAACTGGACGGCAACTAGTATGCATTTATAGTATATAGTTTCATTTTGTTTGCTTAATAGAACATTATTAATTTTTTGAATATGTTCTAAATATTTGTAGGGAGCTCGCCTTAGTTTTAGTGCCCAAGTGCAGAATTACCAAAGCACTGTGTCACAAGTAGTGAATATACTAGGAACTGAGGATCAAGCTGCAAGTCACTTGAGCAAGTGTATTTACTCAATTGGATTGGGTAGCAATGATTACTTGAACAACTATTTCATGCCTCAATTCTATAGCACAGGCACTCAGTATACACCAGATGAGTATGCTGATGATCTTATTCAAGCATATACTGAACAACTTAGAACTCTTTATAATAATGGAGCAAGGAAAATGGTACTATTTGGGATTGGTCAAATAGGCTGCAGCCCAAATATATTGGCTACAAGGAGCCCGGATGGCGTAACATGTGTGGAAGAAATCAATTCAGCAAACCAAATATTCAACAGCAAATTGAAAGGTCTTGTTGATCAATTTAACAACCAGCTTCCTGATTCAAAAGTTATCTATGTAAATTCTTATGGTATTTTTCAAGATATTATAAGCAACCCTTCAGCTTATGGTAATTTAATTTCTATCCTTAACATTTTTCTAGTCACATTTCTTTAAAATCAAATAACATATGAACATGTCACCTTATTGACATCAAATTTAATTTTCAGGTTTTAGTGTTACAAATGCTGGATGCTGTGGAGTAGGAAGGAACAATGGTCAATTTACATGTCTACCATTGCAAACACCATGTGAGAACAGAAGAGAGTATTTGTTTTGGGATGCTTTTCATCCGACTGAAGCTGGAAATGTAGTTGTTGCTCAGAGAGCTTACAGTGCTCAATCTCCAGAGGATGCTTATCCTATTGATATTAGCCACTTAGCTCAGCTCTGA
Protein sequence

>MS.gene065989.t1

MAFEDVINMFALLVVVLGLLSGVGADPQVPCYFIFGDSLVDNGNNNGLQSLARADYFPYGIDFGGPTGRFSNGKTTVDAIAELLGFDDYIPPYASASDDAILKGVNYASAAAGIREETGRQLGARLSFSAQVQNYQSTVSQVVNILGTEDQAASHLSKCIYSIGLGSNDYLNNYFMPQFYSTGTQYTPDETLYNNGARKMVLFGIGQIGCSPNILATRSPDGVTCVEEINSANQIFNSKLKGLVDQFNNQLPDSKVIYVNSYGIFQDIISNPSAYGFSVTNAGCCGVGRNNGQFTCLPLQTPCENRREYLFWDAFHPTEAGNVVVAQRAYSAQSPEDAYPIDISHLAQL