AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06605

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06605.t1 MTR_3g092780 93.333 645 18 2 6 625 41 685 0.0 1248
MS.gene06605.t1 MTR_3g092780 93.178 645 18 3 6 625 41 684 0.0 1241
MS.gene06605.t1 MTR_3g092780 86.977 645 18 3 6 625 41 644 0.0 1140
MS.gene06605.t1 MTR_3g092780 86.822 645 18 4 6 625 41 643 0.0 1134
MS.gene06605.t1 MTR_7g118260 38.412 617 323 14 14 613 7 583 3.99e-106 333
MS.gene06605.t1 MTR_8g024260 38.701 385 180 11 8 357 23 386 1.49e-67 232
MS.gene06605.t1 MTR_7g118260 71.756 131 37 0 14 144 7 137 1.26e-60 212
MS.gene06605.t1 MTR_7g118260 33.136 338 197 9 291 613 223 546 8.85e-30 124
MS.gene06605.t1 MTR_4g061360 58.015 131 55 0 12 142 80 210 1.93e-48 181
MS.gene06605.t1 MTR_4g061360 76.000 50 12 0 564 613 714 763 9.34e-18 87.8
MS.gene06605.t1 MTR_7g118260 30.462 476 291 13 155 613 45 497 6.10e-34 136
MS.gene06605.t1 MTR_3g037390 45.736 129 70 0 15 143 18 146 3.66e-30 125
MS.gene06605.t1 MTR_3g037390 68.889 45 14 0 571 615 498 542 1.38e-12 70.9
MS.gene06605.t1 MTR_4g108880 44.186 129 72 0 15 143 27 155 1.17e-29 124
MS.gene06605.t1 MTR_4g108880 73.333 45 12 0 571 615 505 549 5.26e-14 75.5
MS.gene06605.t1 MTR_7g118260 32.641 337 200 8 291 613 90 413 1.37e-29 122
MS.gene06605.t1 MTR_1g032570 42.276 123 66 2 21 142 15 133 4.52e-24 107
MS.gene06605.t1 MTR_1g098620 78.333 60 13 0 335 394 28 87 5.10e-24 97.4
MS.gene06605.t1 MTR_2g034960 36.306 157 95 2 21 176 33 185 1.25e-23 105
MS.gene06605.t1 MTR_4g131580 36.986 146 80 4 21 159 21 161 1.30e-23 105
MS.gene06605.t1 MTR_3g086100 41.129 124 68 2 21 143 17 136 1.47e-23 105
MS.gene06605.t1 MTR_2g450070 37.903 124 72 2 21 143 22 141 2.10e-23 105
MS.gene06605.t1 MTR_2g450070 37.903 124 72 2 21 143 22 141 2.12e-23 105
MS.gene06605.t1 MTR_4g121020 35.669 157 96 2 21 176 35 187 2.94e-23 105
MS.gene06605.t1 MTR_4g121020 35.669 157 96 2 21 176 35 187 3.07e-23 105
MS.gene06605.t1 MTR_3g106220 30.864 162 99 3 21 181 12 161 3.06e-22 101
MS.gene06605.t1 MTR_8g079940 35.088 171 97 5 21 182 29 194 3.66e-22 100
MS.gene06605.t1 MTR_4g131570 37.008 127 75 2 21 146 21 143 7.47e-22 100
MS.gene06605.t1 MTR_4g131600 34.132 167 89 5 21 180 24 176 1.14e-21 99.8
MS.gene06605.t1 MTR_1g013170 36.220 127 76 2 21 146 9 131 3.81e-21 97.4
MS.gene06605.t1 MTR_3g102600 38.583 127 72 3 21 145 12 134 1.91e-20 89.7
MS.gene06605.t1 MTR_3g102600 33.333 174 95 5 21 192 12 166 5.96e-20 89.7
MS.gene06605.t1 MTR_1g013180 35.766 137 82 3 8 143 148 279 3.14e-19 92.4
MS.gene06605.t1 MTR_7g117705 33.594 128 79 3 21 146 9 132 1.37e-16 83.2
MS.gene06605.t1 MTR_1g049100 30.597 134 82 1 21 143 8 141 1.22e-15 76.3
MS.gene06605.t1 MTR_7g490310 29.496 139 80 2 21 141 9 147 2.13e-15 76.6
MS.gene06605.t1 MTR_3g102590 30.952 168 108 3 21 187 12 172 5.71e-15 74.3
MS.gene06605.t1 MTR_3g102590 31.515 165 105 3 21 184 12 169 6.61e-15 75.1
MS.gene06605.t1 MTR_3g102600 45.000 80 38 3 68 145 10 85 7.63e-15 72.4
MS.gene06605.t1 MTR_5g036480 27.368 190 111 4 21 197 16 191 1.01e-14 74.7
MS.gene06605.t1 MTR_3g102600 45.000 80 38 3 68 145 10 85 2.95e-14 71.6
MS.gene06605.t1 MTR_3g078613 29.851 134 85 2 21 145 23 156 6.18e-14 71.2
MS.gene06605.t1 MTR_1g067110 37.589 141 69 4 492 613 596 736 9.62e-14 75.1
MS.gene06605.t1 MTR_4g106590 29.771 131 82 2 21 141 26 156 1.02e-13 71.2
MS.gene06605.t1 MTR_1g067110 37.589 141 69 4 492 613 431 571 1.08e-13 74.7
MS.gene06605.t1 MTR_4g098870 31.469 143 89 4 9 150 8 142 3.96e-13 72.8
MS.gene06605.t1 MTR_4g098870 31.469 143 89 4 9 150 28 162 4.41e-13 72.8
MS.gene06605.t1 MTR_4g098870 31.469 143 89 4 9 150 8 142 5.02e-13 72.4
MS.gene06605.t1 MTR_4g098870 31.469 143 89 4 9 150 47 181 6.72e-13 72.0
MS.gene06605.t1 MTR_4g098870 31.973 147 87 5 9 154 28 162 6.75e-13 72.0
MS.gene06605.t1 MTR_3g037390 68.889 45 14 0 571 615 394 438 1.01e-12 71.2
MS.gene06605.t1 MTR_3g037390 69.048 42 13 0 102 143 1 42 1.37e-12 70.9
MS.gene06605.t1 MTR_1g032570 48.529 68 30 2 76 142 1 64 1.08e-12 71.2
MS.gene06605.t1 MTR_3g078613 29.630 135 85 3 21 145 23 157 2.19e-12 67.0
MS.gene06605.t1 MTR_5g014040 30.070 143 91 4 9 150 8 142 3.14e-12 69.7
MS.gene06605.t1 MTR_5g014040 30.070 143 91 4 9 150 8 142 3.37e-12 69.7
MS.gene06605.t1 MTR_3g086100 47.826 69 31 2 76 143 1 65 4.54e-12 69.3
MS.gene06605.t1 MTR_3g093860 31.746 126 71 3 23 135 20 143 1.36e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06605.t1 AT5G24470 42.035 452 176 13 6 432 35 425 5.06e-93 298
MS.gene06605.t1 AT5G24470 70.149 67 10 2 553 613 489 551 2.30e-19 92.4
MS.gene06605.t1 AT2G46790 73.381 139 37 0 4 142 20 158 4.53e-69 231
MS.gene06605.t1 AT2G46790 73.381 139 37 0 4 142 20 158 6.87e-69 231
MS.gene06605.t1 AT2G46790 81.250 48 9 0 571 618 417 464 1.25e-17 86.7
MS.gene06605.t1 AT5G60100 59.124 137 56 0 6 142 49 185 2.77e-52 185
MS.gene06605.t1 AT5G60100 59.124 137 56 0 6 142 49 185 2.77e-52 185
MS.gene06605.t1 AT5G60100 59.124 137 56 0 6 142 49 185 2.77e-52 185
MS.gene06605.t1 AT5G60100 59.124 137 56 0 6 142 49 185 7.13e-52 186
MS.gene06605.t1 AT5G60100 69.841 63 18 1 562 624 433 494 3.46e-17 85.5
MS.gene06605.t1 AT5G60100 59.124 137 56 0 6 142 49 185 7.13e-52 186
MS.gene06605.t1 AT5G60100 69.841 63 18 1 562 624 433 494 3.46e-17 85.5
MS.gene06605.t1 AT5G60100 59.124 137 56 0 6 142 49 185 7.13e-52 186
MS.gene06605.t1 AT5G60100 69.841 63 18 1 562 624 433 494 3.46e-17 85.5
MS.gene06605.t1 AT5G60100 59.124 137 56 0 6 142 49 185 7.42e-51 184
MS.gene06605.t1 AT5G60100 69.841 63 18 1 562 624 460 521 5.00e-17 85.1
MS.gene06605.t1 AT5G02810 56.489 131 57 0 12 142 69 199 4.69e-46 174
MS.gene06605.t1 AT5G02810 83.721 43 7 0 571 613 669 711 7.84e-16 81.6
MS.gene06605.t1 AT5G61380 43.511 131 74 0 13 143 11 141 3.89e-29 123
MS.gene06605.t1 AT5G61380 68.889 45 14 0 571 615 533 577 1.20e-12 71.2
MS.gene06605.t1 AT2G25180 35.204 196 118 3 21 215 17 204 1.40e-25 112
MS.gene06605.t1 AT4G31920 40.164 122 68 2 21 141 17 134 1.25e-22 102
MS.gene06605.t1 AT3G16857 35.172 145 89 2 21 164 37 177 9.25e-22 100
MS.gene06605.t1 AT3G16857 35.172 145 89 2 21 164 37 177 1.07e-21 100
MS.gene06605.t1 AT1G67710 38.281 128 74 2 21 147 11 134 7.03e-21 97.1
MS.gene06605.t1 AT2G01760 40.800 125 68 2 21 143 11 131 1.20e-20 94.7
MS.gene06605.t1 AT5G58080 30.516 213 137 4 11 223 10 211 4.55e-19 91.7
MS.gene06605.t1 AT2G46670 81.250 48 9 0 571 618 132 179 5.32e-19 85.5
MS.gene06605.t1 AT2G46790 81.250 48 9 0 571 618 260 307 3.61e-18 86.3
MS.gene06605.t1 AT2G46790 81.250 48 9 0 571 618 260 307 3.61e-18 86.3
MS.gene06605.t1 AT2G46790 81.250 48 9 0 571 618 300 347 7.87e-18 85.9
MS.gene06605.t1 AT2G46790 80.488 41 8 0 102 142 1 41 4.55e-17 83.6
MS.gene06605.t1 AT2G01760 36.111 144 80 4 7 143 21 159 1.05e-16 83.2
MS.gene06605.t1 AT5G02810 83.721 43 7 0 571 613 525 567 5.22e-16 82.0
MS.gene06605.t1 AT5G02810 54.237 59 23 1 84 142 1 55 2.05e-13 73.6
MS.gene06605.t1 AT3G16857 35.455 110 66 2 56 164 2 107 1.38e-15 80.9
MS.gene06605.t1 AT1G19050 30.597 134 84 2 21 145 24 157 6.73e-15 74.3
MS.gene06605.t1 AT1G10470 32.031 128 78 1 23 141 36 163 2.07e-14 74.3
MS.gene06605.t1 AT1G10470 32.031 128 78 1 23 141 22 149 2.12e-14 73.9
MS.gene06605.t1 AT3G62670 30.114 176 110 5 13 184 34 200 2.23e-14 76.3
MS.gene06605.t1 AT1G59940 32.812 128 77 1 23 141 35 162 2.69e-14 73.2
MS.gene06605.t1 AT1G59940 32.812 128 77 1 23 141 127 254 6.26e-14 73.6
MS.gene06605.t1 AT3G48100 33.333 129 75 3 17 135 22 149 1.29e-13 70.1
MS.gene06605.t1 AT1G74890 30.769 130 81 2 21 141 18 147 1.50e-13 70.5
MS.gene06605.t1 AT3G57040 28.986 138 79 1 23 141 11 148 2.77e-13 70.5
MS.gene06605.t1 AT3G57040 28.986 138 79 1 23 141 11 148 2.77e-13 70.5
MS.gene06605.t1 AT5G62920 29.730 148 91 2 1 135 1 148 4.74e-13 68.6
MS.gene06605.t1 AT2G41310 30.882 136 77 2 23 141 11 146 8.21e-13 68.6
MS.gene06605.t1 AT5G49240 33.835 133 81 3 21 150 42 170 5.07e-12 67.4
MS.gene06605.t1 AT4G00760 31.250 160 102 5 39 196 1 154 1.37e-11 66.6
MS.gene06605.t1 AT3G56380 28.358 134 86 2 21 144 20 153 1.54e-11 63.2
MS.gene06605.t1 AT1G49190 28.689 122 82 2 23 143 36 153 2.57e-11 67.0
MS.gene06605.t1 AT1G49190 28.689 122 82 2 23 143 36 153 3.63e-11 65.9
MS.gene06605.t1 AT1G68210 24.658 146 103 2 21 163 13 154 9.87e-11 65.5

Find 114 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGAATCCTGATTCTCTTTC+TGG 0.070992 3.3:+77450012 MS.gene06605:CDS
CGCACTTCTCACATTAATTA+TGG 0.184807 3.3:+77447813 MS.gene06605:CDS
CTTACACCTTTCACAGGAAT+TGG 0.249245 3.3:-77449306 None:intergenic
GAGCAGCGTCCTCGAGTTAA+AGG 0.270096 3.3:+77449973 MS.gene06605:CDS
CAAGAACTTGACATTCATTT+AGG 0.270340 3.3:+77448413 MS.gene06605:CDS
TCCAGTAGTATTTGTAATAA+TGG 0.285223 3.3:+77449606 MS.gene06605:CDS
GGAATTTGTGGCAGCATGTT+TGG 0.301229 3.3:+77448061 MS.gene06605:CDS
GCCGCAACCGCTGGCATAAA+TGG 0.311050 3.3:+77448215 MS.gene06605:CDS
GCCATTTATGCCAGCGGTTG+CGG 0.331299 3.3:-77448216 None:intergenic
ACCAATACTGTTAAAATTGC+TGG 0.341574 3.3:-77449634 None:intergenic
TGCTGTTGCTGATGGCTTGA+AGG 0.353593 3.3:+77447711 MS.gene06605:CDS
TGCTTGCATTCAAAGAAATA+AGG 0.359592 3.3:+77448322 MS.gene06605:CDS
AAGGAAGCTATTGACTTGAT+TGG 0.361168 3.3:+77448727 MS.gene06605:CDS
TTGGGAGAGAATGCCCTTGC+TGG 0.362509 3.3:-77449287 None:intergenic
GTATTGAACTATCTGAGTTA+TGG 0.368410 3.3:-77449224 None:intergenic
GTGTATCACTTTCATCTTGA+GGG 0.373515 3.3:-77448238 None:intergenic
CTTAGAAAATGCAACTATAA+AGG 0.375160 3.3:+77446877 MS.gene06605:CDS
TTCGAGAAACACAACTGAAC+CGG 0.382827 3.3:-77449406 None:intergenic
GTTCCTGTGCATACACAATT+TGG 0.389905 3.3:-77449524 None:intergenic
GAGATCCTTCTCAAAGTTGC+TGG 0.389986 3.3:-77448857 None:intergenic
ACAACTGAACCGGGCATTGA+TGG 0.393075 3.3:-77449396 None:intergenic
TCCATTATTACAAATACTAC+TGG 0.397236 3.3:-77449607 None:intergenic
TTTGGAGTGCTGTTTCCATT+TGG 0.403987 3.3:-77449501 None:intergenic
GATACACTTTGATCAGTTGT+AGG 0.405228 3.3:-77449585 None:intergenic
CTTAGTTCATTTATTCGAAT+CGG 0.408502 3.3:-77448039 None:intergenic
CATAAGGGTGTGCCTTTCTT+CGG 0.412245 3.3:-77448881 None:intergenic
TCAAATTTACTCTACTACTA+AGG 0.413508 3.3:+77448708 MS.gene06605:CDS
GAGAAGTGCGTAGCCGGATA+TGG 0.417405 3.3:-77447800 None:intergenic
TGTCCTGCGCGATCACTGCC+TGG 0.417920 3.3:-77448436 None:intergenic
TGTGCATACACAATTTGGTT+TGG 0.418411 3.3:-77449519 None:intergenic
AATGATCTTTGTATGGCCTA+TGG 0.425220 3.3:+77449333 MS.gene06605:CDS
CTGAAGCATTGGAATGCATA+AGG 0.429243 3.3:-77448897 None:intergenic
GTCGATTTGCCAGCCATATC+CGG 0.434584 3.3:+77447787 MS.gene06605:CDS
AGAGAGATGTTATGAGAAGA+AGG 0.440825 3.3:+77449818 MS.gene06605:CDS
TTCAATATCATACTTATGAC+AGG 0.442500 3.3:-77447859 None:intergenic
TTACACCTTTCACAGGAATT+GGG 0.444215 3.3:-77449305 None:intergenic
TCTTGTGTCTTTATTTCACT+TGG 0.446311 3.3:-77448395 None:intergenic
GCAGTTGCTGCTGTTGCTGA+TGG 0.454486 3.3:+77447703 MS.gene06605:intron
AAGGTTCAATGATCTTTGTA+TGG 0.455443 3.3:+77449326 MS.gene06605:CDS
CCAGGGTTTCGTACACAATC+AGG 0.457218 3.3:+77449369 MS.gene06605:CDS
GAGAAGTTATTTACTACTGC+AGG 0.458265 3.3:-77449165 None:intergenic
AATAAGGACTTAATTGAGAA+AGG 0.462433 3.3:+77448338 MS.gene06605:CDS
CAGAACAACAGCAGTTTCAG+AGG 0.462917 3.3:+77449707 MS.gene06605:CDS
CAGCAGTCAGCCGCAACCGC+TGG 0.465375 3.3:+77448206 MS.gene06605:intron
GTGAAATGAAAGGGCTTATG+AGG 0.465706 3.3:+77446770 MS.gene06605:intron
GTTTGACCATTCTCCACAGT+TGG 0.467281 3.3:+77448810 MS.gene06605:CDS
TTGCTGATGGCTTGAAGGCA+TGG 0.467739 3.3:+77447716 MS.gene06605:CDS
CCAGAAAGAGAATCAGGATT+CGG 0.468435 3.3:-77450012 None:intergenic
TACAAACCTCGCGGTCCAAA+TGG 0.472681 3.3:+77449486 MS.gene06605:CDS
ATTCATGCAGGTATACAAAC+AGG 0.476773 3.3:+77449127 MS.gene06605:intron
GAGATAAGTCTTTGATCCTC+CGG 0.478938 3.3:-77449561 None:intergenic
TAAATGAACTAAGGAATTTG+TGG 0.487302 3.3:+77448049 MS.gene06605:CDS
TGCTGATGGCTTGAAGGCAT+GGG 0.496945 3.3:+77447717 MS.gene06605:CDS
AATTCATCAATTGATTGCAC+AGG 0.498212 3.3:+77448784 MS.gene06605:CDS
CCGTTTGAAAGCTGAAGCAT+TGG 0.498244 3.3:-77448908 None:intergenic
TAATGTGAGAAGTGCGTAGC+CGG 0.502440 3.3:-77447806 None:intergenic
CAATTCCTGTGAAAGGTGTA+AGG 0.503833 3.3:+77449307 MS.gene06605:CDS
CCAATGCTTCAGCTTTCAAA+CGG 0.514454 3.3:+77448908 MS.gene06605:CDS
GGAACACAAGTCAGAACATC+CGG 0.514906 3.3:+77449542 MS.gene06605:CDS
AATGAAAGGGCTTATGAGGT+GGG 0.528311 3.3:+77446774 MS.gene06605:intron
TGAAGCATTGGAATGCATAA+GGG 0.528347 3.3:-77448896 None:intergenic
TGTGTATCACTTTCATCTTG+AGG 0.529215 3.3:-77448239 None:intergenic
AGTGCGTAGCCGGATATGGC+TGG 0.534736 3.3:-77447796 None:intergenic
AAAGATCCAACTGTGGAGAA+TGG 0.536900 3.3:-77448816 None:intergenic
TGGTGGAAGTGTTGAACCAT+AGG 0.536921 3.3:-77449349 None:intergenic
TTGAACCTTACACCTTTCAC+AGG 0.537739 3.3:-77449312 None:intergenic
TGGGAGAGAATGCCCTTGCT+GGG 0.541919 3.3:-77449286 None:intergenic
ATTGGTTACGGAAGTAATTG+TGG 0.545976 3.3:+77449651 MS.gene06605:CDS
AGAAGGATCTCACCGAAGAA+AGG 0.548442 3.3:+77448869 MS.gene06605:CDS
AGATCCTTCTCAAAGTTGCT+GGG 0.549454 3.3:-77448856 None:intergenic
AACTGCTGTTGTTCTGAAAG+TGG 0.552031 3.3:-77449700 None:intergenic
AACGCTGCTAGTAATCGTTC+CGG 0.555367 3.3:+77448290 MS.gene06605:CDS
TTTAGGAATGCTAGCATCAG+TGG 0.555975 3.3:+77448661 MS.gene06605:CDS
CGATTCGAATAAATGAACTA+AGG 0.559225 3.3:+77448040 MS.gene06605:CDS
AAATGAAAGGGCTTATGAGG+TGG 0.560859 3.3:+77446773 MS.gene06605:intron
TCGAGAAACACAACTGAACC+GGG 0.562948 3.3:-77449405 None:intergenic
TCTCTCCCAATTCCTGTGAA+AGG 0.563294 3.3:+77449300 MS.gene06605:CDS
ACTTGACATTCATTTAGGCC+AGG 0.566880 3.3:+77448418 MS.gene06605:CDS
CAACTTCACATTCCCAGCAA+GGG 0.587370 3.3:+77449274 MS.gene06605:CDS
TCAGGTCCACCATCAATGCC+CGG 0.589208 3.3:+77449387 MS.gene06605:CDS
AGAACAACAGCAGTTTCAGA+GGG 0.589848 3.3:+77449708 MS.gene06605:CDS
AGCGCAAATAATTGCAAGGA+CGG 0.590278 3.3:+77448622 MS.gene06605:CDS
GCAACTTCACATTCCCAGCA+AGG 0.590922 3.3:+77449273 MS.gene06605:CDS
TCATCCCAGCAACTTTGAGA+AGG 0.593867 3.3:+77448852 MS.gene06605:CDS
ACTGAACCGGGCATTGATGG+TGG 0.596008 3.3:-77449393 None:intergenic
AAACCAAATTGTGTATGCAC+AGG 0.596870 3.3:+77449521 MS.gene06605:CDS
AAAGAGAATCAGGATTCGGT+TGG 0.599420 3.3:-77450008 None:intergenic
ATAAACAATCAACATGGGTG+AGG 0.602260 3.3:+77446648 None:intergenic
TATGGTTCAACACTTCCACC+AGG 0.607254 3.3:+77449351 MS.gene06605:CDS
GACAAGCGCAAATAATTGCA+AGG 0.612224 3.3:+77448618 MS.gene06605:CDS
AATGCAAGCAGCATCACCGC+CGG 0.616301 3.3:-77448309 None:intergenic
ACAAATTGTCCTTTAACTCG+AGG 0.617609 3.3:-77449982 None:intergenic
AATGAAGACCTCACAAACAG+TGG 0.617981 3.3:+77449735 MS.gene06605:CDS
TTGAGGGCCATTTATGCCAG+CGG 0.618633 3.3:-77448222 None:intergenic
GTGAATATCCACTGTTTGTG+AGG 0.619800 3.3:-77449743 None:intergenic
ATCGCGCAGGACAGTCACAC+CGG 0.620330 3.3:+77448446 MS.gene06605:CDS
CCTGATTGTGTACGAAACCC+TGG 0.626598 3.3:-77449369 None:intergenic
AAGGCATGGGAAATACTCAA+AGG 0.628269 3.3:+77447730 MS.gene06605:CDS
GGAAGTAATTGTGGAAGTAG+CGG 0.631566 3.3:+77449660 MS.gene06605:CDS
CTGTTTCCATTTGGACCGCG+AGG 0.643799 3.3:-77449492 None:intergenic
GAATGCTAGCATCAGTGGTG+AGG 0.644176 3.3:+77448666 MS.gene06605:CDS
AGGCCAGGCAGTGATCGCGC+AGG 0.648174 3.3:+77448433 MS.gene06605:CDS
GTATACAAATGCATGTTGAG+AGG 0.663604 3.3:+77447994 MS.gene06605:CDS
ATGGTTCAACACTTCCACCA+GGG 0.675718 3.3:+77449352 MS.gene06605:CDS
GCTGCTAGTAATCGTTCCGG+CGG 0.691660 3.3:+77448293 MS.gene06605:CDS
TCAATATCATACTTATGACA+GGG 0.693313 3.3:-77447858 None:intergenic
ATGGGTGAGGTTGTAATGAG+TGG 0.695889 3.3:+77446661 MS.gene06605:CDS
TTGTGGAAGTAGCGGCAATG+CGG 0.712966 3.3:+77449668 MS.gene06605:CDS
CTGAGAGAAAGATCCAACTG+TGG 0.713368 3.3:-77448823 None:intergenic
GAGCAGCTTTACAAACCTCG+CGG 0.717302 3.3:+77449477 MS.gene06605:CDS
GCGCAGGACAGTCACACCGG+AGG 0.719064 3.3:+77448449 MS.gene06605:CDS
ACACAAGTCAGAACATCCGG+AGG 0.742561 3.3:+77449545 MS.gene06605:CDS
GATTGTGTACGAAACCCTGG+TGG 0.767923 3.3:-77449366 None:intergenic
AGTATCAGATCAATACTGCG+CGG 0.783873 3.3:-77447757 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAATTTATTAACAAAATT+GGG + chr3.3:77448152-77448171 MS.gene06605:intron 10.0%
!! TAAGAATTTATTAACAAAAT+TGG + chr3.3:77448151-77448170 MS.gene06605:intron 10.0%
!! TTAATAATTACAAAACTTAA+GGG + chr3.3:77447300-77447319 MS.gene06605:intron 10.0%
!! TTTAATAATTACAAAACTTA+AGG + chr3.3:77447299-77447318 MS.gene06605:intron 10.0%
!!! ATGTACAATTTTTTTTTTTT+TGG + chr3.3:77447074-77447093 MS.gene06605:intron 10.0%
!! ACGAAAAAATTAGAATAAAA+AGG - chr3.3:77448947-77448966 None:intergenic 15.0%
!! CGAAAAAATTAGAATAAAAA+GGG - chr3.3:77448946-77448965 None:intergenic 15.0%
!! TAATAATTACAAAACTTAAG+GGG + chr3.3:77447301-77447320 MS.gene06605:intron 15.0%
!!! ACTTATTTATACTTTTTAAC+AGG + chr3.3:77449921-77449940 MS.gene06605:intron 15.0%
!!! ATTATTGAGTTTTATTATCT+TGG + chr3.3:77447594-77447613 MS.gene06605:intron 15.0%
!!! GTTAAAAAGTATAAATAAGT+TGG - chr3.3:77449921-77449940 None:intergenic 15.0%
!!! TTGAACAAACTTTTATTTTT+AGG + chr3.3:77448535-77448554 MS.gene06605:intron 15.0%
!! ATTAGAAATTTAGAAGTCTT+TGG + chr3.3:77447213-77447232 MS.gene06605:intron 20.0%
!! GTAAATATTAGGTTATATTG+AGG + chr3.3:77447120-77447139 MS.gene06605:intron 20.0%
!!! AATTTTAACAGTATTGGTTA+CGG + chr3.3:77449639-77449658 MS.gene06605:CDS 20.0%
! AAGAACTTCAAAACATGATA+CGG + chr3.3:77449010-77449029 MS.gene06605:intron 25.0%
! AATAAGGACTTAATTGAGAA+AGG + chr3.3:77448338-77448357 MS.gene06605:CDS 25.0%
! AATATTGCTGTGTGTTTAAT+TGG + chr3.3:77446952-77446971 MS.gene06605:intron 25.0%
! AGCACAAATAACTGTAAAAA+TGG + chr3.3:77448592-77448611 MS.gene06605:CDS 25.0%
! CTTAGAAAATGCAACTATAA+AGG + chr3.3:77446877-77446896 MS.gene06605:CDS 25.0%
! CTTAGTTCATTTATTCGAAT+CGG - chr3.3:77448042-77448061 None:intergenic 25.0%
! GAATAATTGTACCAAGTTTA+TGG - chr3.3:77447535-77447554 None:intergenic 25.0%
! TAAATGAACTAAGGAATTTG+TGG + chr3.3:77448049-77448068 MS.gene06605:CDS 25.0%
! TAGAACTTAGATTTACTTTC+AGG - chr3.3:77447653-77447672 None:intergenic 25.0%
! TCAAATTTACTCTACTACTA+AGG + chr3.3:77448708-77448727 MS.gene06605:CDS 25.0%
! TCAATATCATACTTATGACA+GGG - chr3.3:77447861-77447880 None:intergenic 25.0%
! TCCAGTAGTATTTGTAATAA+TGG + chr3.3:77449606-77449625 MS.gene06605:CDS 25.0%
! TCCATTATTACAAATACTAC+TGG - chr3.3:77449610-77449629 None:intergenic 25.0%
! TTCAATATCATACTTATGAC+AGG - chr3.3:77447862-77447881 None:intergenic 25.0%
!! ATCTCTCTTTTCTTTTCAAA+CGG - chr3.3:77449806-77449825 None:intergenic 25.0%
!!! TTTATTTTTAGGATTAAGCG+TGG + chr3.3:77448546-77448565 MS.gene06605:intron 25.0%
!!! TTTTTTAAAGAGAAGTGACA+TGG + chr3.3:77447429-77447448 MS.gene06605:intron 25.0%
AAGGTTCAATGATCTTTGTA+TGG + chr3.3:77449326-77449345 MS.gene06605:CDS 30.0%
AATTACAAAACTTAAGGGGA+TGG + chr3.3:77447305-77447324 MS.gene06605:intron 30.0%
AATTCATCAATTGATTGCAC+AGG + chr3.3:77448784-77448803 MS.gene06605:CDS 30.0%
ACCAATACTGTTAAAATTGC+TGG - chr3.3:77449637-77449656 None:intergenic 30.0%
ATAGCAGTATGGAAATTACT+AGG + chr3.3:77447504-77447523 MS.gene06605:intron 30.0%
CAAGAACTTGACATTCATTT+AGG + chr3.3:77448413-77448432 MS.gene06605:CDS 30.0%
CGATTCGAATAAATGAACTA+AGG + chr3.3:77448040-77448059 MS.gene06605:CDS 30.0%
GAAAGAAAGAAATTTACCTC+CGG - chr3.3:77448468-77448487 None:intergenic 30.0%
GTATTGAACTATCTGAGTTA+TGG - chr3.3:77449227-77449246 None:intergenic 30.0%
TGCTATAAGACTCTATTTCA+AGG - chr3.3:77447490-77447509 None:intergenic 30.0%
TGCTTGCATTCAAAGAAATA+AGG + chr3.3:77448322-77448341 MS.gene06605:CDS 30.0%
TGGTGAGAAAATAGTAAGAT+TGG + chr3.3:77446681-77446700 MS.gene06605:intron 30.0%
! AATAGAGTCTTATAGCAGTA+TGG + chr3.3:77447493-77447512 MS.gene06605:intron 30.0%
! GCAAATTTTGTAAAGGATCA+AGG + chr3.3:77447239-77447258 MS.gene06605:intron 30.0%
! GTGTATGATTTTTATGCTTG+TGG + chr3.3:77449046-77449065 MS.gene06605:intron 30.0%
! TCAGATTCTTTTTGCATACT+TGG - chr3.3:77449249-77449268 None:intergenic 30.0%
! TCTTGTGTCTTTATTTCACT+TGG - chr3.3:77448398-77448417 None:intergenic 30.0%
! TTGGACTGCAAATTTTGTAA+AGG + chr3.3:77447232-77447251 MS.gene06605:intron 30.0%
!!! GAATTTTTGAGACTGCAATT+CGG - chr3.3:77448769-77448788 None:intergenic 30.0%
AAACCAAATTGTGTATGCAC+AGG + chr3.3:77449521-77449540 MS.gene06605:CDS 35.0%
AATGATCTTTGTATGGCCTA+TGG + chr3.3:77449333-77449352 MS.gene06605:CDS 35.0%
ACAAATTGTCCTTTAACTCG+AGG - chr3.3:77449985-77450004 None:intergenic 35.0%
ACTAGGTTAAGCCATAAACT+TGG + chr3.3:77447521-77447540 MS.gene06605:intron 35.0%
AGAGAGATGTTATGAGAAGA+AGG + chr3.3:77449818-77449837 MS.gene06605:CDS 35.0%
AGTAAGATTGGAAGAAGAAG+AGG + chr3.3:77446693-77446712 MS.gene06605:intron 35.0%
ATTCATGCAGGTATACAAAC+AGG + chr3.3:77449127-77449146 MS.gene06605:intron 35.0%
ATTGGTTACGGAAGTAATTG+TGG + chr3.3:77449651-77449670 MS.gene06605:CDS 35.0%
CGCACTTCTCACATTAATTA+TGG + chr3.3:77447813-77447832 MS.gene06605:CDS 35.0%
GAGAAGTTATTTACTACTGC+AGG - chr3.3:77449168-77449187 None:intergenic 35.0%
GATACACTTTGATCAGTTGT+AGG - chr3.3:77449588-77449607 None:intergenic 35.0%
GGAGAAATTCTTGCCAAAAA+TGG + chr3.3:77446795-77446814 MS.gene06605:CDS 35.0%
GTATACAAATGCATGTTGAG+AGG + chr3.3:77447994-77448013 MS.gene06605:CDS 35.0%
GTGTATCACTTTCATCTTGA+GGG - chr3.3:77448241-77448260 None:intergenic 35.0%
TGTGCATACACAATTTGGTT+TGG - chr3.3:77449522-77449541 None:intergenic 35.0%
TGTGTATCACTTTCATCTTG+AGG - chr3.3:77448242-77448261 None:intergenic 35.0%
TGTTTGTATACCTGCATGAA+TGG - chr3.3:77449128-77449147 None:intergenic 35.0%
TTACACCTTTCACAGGAATT+GGG - chr3.3:77449308-77449327 None:intergenic 35.0%
! TCAAGGTGTCATAAATTCCT+AGG - chr3.3:77447473-77447492 None:intergenic 35.0%
! TTTTCTCCAGAAAGAGAATC+AGG - chr3.3:77450021-77450040 None:intergenic 35.0%
! TTTTGTTAGCTGAGAATCCT+AGG + chr3.3:77447453-77447472 MS.gene06605:intron 35.0%
!! AAGGAAGCTATTGACTTGAT+TGG + chr3.3:77448727-77448746 MS.gene06605:CDS 35.0%
!! GCCAGCAATTTTAACAGTAT+TGG + chr3.3:77449633-77449652 MS.gene06605:CDS 35.0%
!! TCTTGCCAAAAATGGTTTTG+AGG + chr3.3:77446803-77446822 MS.gene06605:CDS 35.0%
!! TGAAGCATTGGAATGCATAA+GGG - chr3.3:77448899-77448918 None:intergenic 35.0%
!!! CTTGCCAAAAATGGTTTTGA+GGG + chr3.3:77446804-77446823 MS.gene06605:CDS 35.0%
AAAGATCCAACTGTGGAGAA+TGG - chr3.3:77448819-77448838 None:intergenic 40.0%
AAATGAAAGGGCTTATGAGG+TGG + chr3.3:77446773-77446792 MS.gene06605:intron 40.0%
AAATGGTGTTCCATTCATGC+AGG + chr3.3:77449115-77449134 MS.gene06605:intron 40.0%
AAGGCATGGGAAATACTCAA+AGG + chr3.3:77447730-77447749 MS.gene06605:CDS 40.0%
AATGAAAGGGCTTATGAGGT+GGG + chr3.3:77446774-77446793 MS.gene06605:intron 40.0%
AATGAAGACCTCACAAACAG+TGG + chr3.3:77449735-77449754 MS.gene06605:CDS 40.0%
ACTTGACATTCATTTAGGCC+AGG + chr3.3:77448418-77448437 MS.gene06605:CDS 40.0%
AGAACAACAGCAGTTTCAGA+GGG + chr3.3:77449708-77449727 MS.gene06605:CDS 40.0%
AGATCCTTCTCAAAGTTGCT+GGG - chr3.3:77448859-77448878 None:intergenic 40.0%
AGCGCAAATAATTGCAAGGA+CGG + chr3.3:77448622-77448641 MS.gene06605:CDS 40.0%
AGTATCAGATCAATACTGCG+CGG - chr3.3:77447760-77447779 None:intergenic 40.0%
ATTGGAAGAAGAAGAGGAGA+AGG + chr3.3:77446699-77446718 MS.gene06605:intron 40.0%
CCAATGCTTCAGCTTTCAAA+CGG + chr3.3:77448908-77448927 MS.gene06605:CDS 40.0%
CCAGAAAGAGAATCAGGATT+CGG - chr3.3:77450015-77450034 None:intergenic 40.0%
CTGCATGCTTATCACTGAAA+TGG + chr3.3:77449098-77449117 MS.gene06605:intron 40.0%
CTTACACCTTTCACAGGAAT+TGG - chr3.3:77449309-77449328 None:intergenic 40.0%
GACAAGCGCAAATAATTGCA+AGG + chr3.3:77448618-77448637 MS.gene06605:CDS 40.0%
GAGATAAGTCTTTGATCCTC+CGG - chr3.3:77449564-77449583 None:intergenic 40.0%
GCATGCAGAATTCAACAAAG+CGG - chr3.3:77449086-77449105 None:intergenic 40.0%
GGAAGTAATTGTGGAAGTAG+CGG + chr3.3:77449660-77449679 MS.gene06605:CDS 40.0%
GTGAAATGAAAGGGCTTATG+AGG + chr3.3:77446770-77446789 MS.gene06605:intron 40.0%
GTGAATATCCACTGTTTGTG+AGG - chr3.3:77449746-77449765 None:intergenic 40.0%
GTTCCTGTGCATACACAATT+TGG - chr3.3:77449527-77449546 None:intergenic 40.0%
GTTTGGAGAAGACAATCAGT+AGG + chr3.3:77448078-77448097 MS.gene06605:intron 40.0%
TGTAAAGGATCAAGGCTCAA+GGG + chr3.3:77447247-77447266 MS.gene06605:intron 40.0%
TTCGAGAAACACAACTGAAC+CGG - chr3.3:77449409-77449428 None:intergenic 40.0%
TTGAACCTTACACCTTTCAC+AGG - chr3.3:77449315-77449334 None:intergenic 40.0%
TTGTAAAGGATCAAGGCTCA+AGG + chr3.3:77447246-77447265 MS.gene06605:intron 40.0%
TTTAGGAATGCTAGCATCAG+TGG + chr3.3:77448661-77448680 MS.gene06605:CDS 40.0%
! AAAGAGAATCAGGATTCGGT+TGG - chr3.3:77450011-77450030 None:intergenic 40.0%
! AGCACCCTCAAAACCATTTT+TGG - chr3.3:77446811-77446830 None:intergenic 40.0%
! CAATTCCTGTGAAAGGTGTA+AGG + chr3.3:77449307-77449326 MS.gene06605:CDS 40.0%
!! AACTGCTGTTGTTCTGAAAG+TGG - chr3.3:77449703-77449722 None:intergenic 40.0%
!! ATCATTTTGTTCGACTCGCA+AGG + chr3.3:77448496-77448515 MS.gene06605:intron 40.0%
!! CTGAAGCATTGGAATGCATA+AGG - chr3.3:77448900-77448919 None:intergenic 40.0%
!! TTTGGAGTGCTGTTTCCATT+TGG - chr3.3:77449504-77449523 None:intergenic 40.0%
!!! AATGGTTTTGAGGGTGCTTT+TGG + chr3.3:77446813-77446832 MS.gene06605:CDS 40.0%
!!! GCGATGATCAAGAGCATTTT+AGG + chr3.3:77448644-77448663 MS.gene06605:CDS 40.0%
AACGCTGCTAGTAATCGTTC+CGG + chr3.3:77448290-77448309 MS.gene06605:CDS 45.0%
AAGAAGAAGAGGAGAAGGTG+AGG + chr3.3:77446704-77446723 MS.gene06605:intron 45.0%
AGAAGAAGAGGAGAAGGTGA+GGG + chr3.3:77446705-77446724 MS.gene06605:intron 45.0%
AGAAGGATCTCACCGAAGAA+AGG + chr3.3:77448869-77448888 MS.gene06605:CDS 45.0%
AGAAGGTGAGGGAAGAAGAA+GGG + chr3.3:77446716-77446735 MS.gene06605:intron 45.0%
AGCGTGGCTAACTGCAAAAA+TGG + chr3.3:77448562-77448581 MS.gene06605:CDS 45.0%
ATGGGTGAGGTTGTAATGAG+TGG + chr3.3:77446661-77446680 MS.gene06605:CDS 45.0%
ATGGTTCAACACTTCCACCA+GGG + chr3.3:77449352-77449371 MS.gene06605:CDS 45.0%
CAACTTCACATTCCCAGCAA+GGG + chr3.3:77449274-77449293 MS.gene06605:CDS 45.0%
CAGAACAACAGCAGTTTCAG+AGG + chr3.3:77449707-77449726 MS.gene06605:CDS 45.0%
CCGAATCCTGATTCTCTTTC+TGG + chr3.3:77450012-77450031 MS.gene06605:CDS 45.0%
CCGTTTGAAAGCTGAAGCAT+TGG - chr3.3:77448911-77448930 None:intergenic 45.0%
CTGAGAGAAAGATCCAACTG+TGG - chr3.3:77448826-77448845 None:intergenic 45.0%
GAGATCCTTCTCAAAGTTGC+TGG - chr3.3:77448860-77448879 None:intergenic 45.0%
GGAACACAAGTCAGAACATC+CGG + chr3.3:77449542-77449561 MS.gene06605:CDS 45.0%
GGAATTTGTGGCAGCATGTT+TGG + chr3.3:77448061-77448080 MS.gene06605:CDS 45.0%
GGCTAACTGCAAAAATGGAG+TGG + chr3.3:77448567-77448586 MS.gene06605:CDS 45.0%
GTTTGACCATTCTCCACAGT+TGG + chr3.3:77448810-77448829 MS.gene06605:CDS 45.0%
TATGGTTCAACACTTCCACC+AGG + chr3.3:77449351-77449370 MS.gene06605:CDS 45.0%
TCGAGAAACACAACTGAACC+GGG - chr3.3:77449408-77449427 None:intergenic 45.0%
TCTCTCCCAATTCCTGTGAA+AGG + chr3.3:77449300-77449319 MS.gene06605:CDS 45.0%
! CATAAGGGTGTGCCTTTCTT+CGG - chr3.3:77448884-77448903 None:intergenic 45.0%
! GAGGTGGTGGTGAAATGAAA+GGG + chr3.3:77446761-77446780 MS.gene06605:intron 45.0%
! TAATGTGAGAAGTGCGTAGC+CGG - chr3.3:77447809-77447828 None:intergenic 45.0%
! TCATCCCAGCAACTTTGAGA+AGG + chr3.3:77448852-77448871 MS.gene06605:CDS 45.0%
!! TGGTGGAAGTGTTGAACCAT+AGG - chr3.3:77449352-77449371 None:intergenic 45.0%
!! AATTAATTTAAGTATTAATA+AGG - chr3.3:77447917-77447936 None:intergenic 5.0%
!! TTTAATTAATTGTAAATATT+AGG + chr3.3:77447109-77447128 MS.gene06605:intron 5.0%
ACACAAGTCAGAACATCCGG+AGG + chr3.3:77449545-77449564 MS.gene06605:CDS 50.0%
AGTGGAACTGAGAGTAGAGG+AGG + chr3.3:77446739-77446758 MS.gene06605:intron 50.0%
CCAGGGTTTCGTACACAATC+AGG + chr3.3:77449369-77449388 MS.gene06605:CDS 50.0%
CCTGATTGTGTACGAAACCC+TGG - chr3.3:77449372-77449391 None:intergenic 50.0%
GAATCTTGCGACGACATCAC+TGG - chr3.3:77447964-77447983 None:intergenic 50.0%
GAATGCTAGCATCAGTGGTG+AGG + chr3.3:77448666-77448685 MS.gene06605:CDS 50.0%
GAGAAGGTGAGGGAAGAAGA+AGG + chr3.3:77446715-77446734 MS.gene06605:intron 50.0%
GAGCAGCTTTACAAACCTCG+CGG + chr3.3:77449477-77449496 MS.gene06605:CDS 50.0%
GATTGTGTACGAAACCCTGG+TGG - chr3.3:77449369-77449388 None:intergenic 50.0%
GCAACTTCACATTCCCAGCA+AGG + chr3.3:77449273-77449292 MS.gene06605:CDS 50.0%
TACAAACCTCGCGGTCCAAA+TGG + chr3.3:77449486-77449505 MS.gene06605:CDS 50.0%
TGCTGTTGCTGATGGCTTGA+AGG + chr3.3:77447711-77447730 MS.gene06605:CDS 50.0%
TTGAGGGCCATTTATGCCAG+CGG - chr3.3:77448225-77448244 None:intergenic 50.0%
TTGCTGATGGCTTGAAGGCA+TGG + chr3.3:77447716-77447735 MS.gene06605:CDS 50.0%
TTGTGGAAGTAGCGGCAATG+CGG + chr3.3:77449668-77449687 MS.gene06605:CDS 50.0%
! GGAGGTGGTGGTGAAATGAA+AGG + chr3.3:77446760-77446779 MS.gene06605:intron 50.0%
! TGCTGATGGCTTGAAGGCAT+GGG + chr3.3:77447717-77447736 MS.gene06605:CDS 50.0%
!! ACAACTGAACCGGGCATTGA+TGG - chr3.3:77449399-77449418 None:intergenic 50.0%
!! AGCAGCGTTGTTTTCAGCAG+TGG - chr3.3:77448279-77448298 None:intergenic 50.0%
!! GTCGATTTGCCAGCCATATC+CGG + chr3.3:77447787-77447806 MS.gene06605:CDS 50.0%
AATGCAAGCAGCATCACCGC+CGG - chr3.3:77448312-77448331 None:intergenic 55.0%
ACTGAGAGTAGAGGAGGAGG+TGG + chr3.3:77446745-77446764 MS.gene06605:intron 55.0%
CTGTTTCCATTTGGACCGCG+AGG - chr3.3:77449495-77449514 None:intergenic 55.0%
GAGCAGCGTCCTCGAGTTAA+AGG + chr3.3:77449973-77449992 MS.gene06605:CDS 55.0%
GCAGTTGCTGCTGTTGCTGA+TGG + chr3.3:77447703-77447722 MS.gene06605:intron 55.0%
GCCATTTATGCCAGCGGTTG+CGG - chr3.3:77448219-77448238 None:intergenic 55.0%
GCTGCTAGTAATCGTTCCGG+CGG + chr3.3:77448293-77448312 MS.gene06605:CDS 55.0%
GGAACTGAGAGTAGAGGAGG+AGG + chr3.3:77446742-77446761 MS.gene06605:intron 55.0%
GGGAGTGGAACTGAGAGTAG+AGG + chr3.3:77446736-77446755 MS.gene06605:intron 55.0%
GTGAGGGAAGAAGAAGGGAG+TGG + chr3.3:77446721-77446740 MS.gene06605:intron 55.0%
TCAGGTCCACCATCAATGCC+CGG + chr3.3:77449387-77449406 MS.gene06605:CDS 55.0%
TGGGAGAGAATGCCCTTGCT+GGG - chr3.3:77449289-77449308 None:intergenic 55.0%
TTGGGAGAGAATGCCCTTGC+TGG - chr3.3:77449290-77449309 None:intergenic 55.0%
! GAGAAGTGCGTAGCCGGATA+TGG - chr3.3:77447803-77447822 None:intergenic 55.0%
!! ACTGAACCGGGCATTGATGG+TGG - chr3.3:77449396-77449415 None:intergenic 55.0%
AGTGCGTAGCCGGATATGGC+TGG - chr3.3:77447799-77447818 None:intergenic 60.0%
ATCGCGCAGGACAGTCACAC+CGG + chr3.3:77448446-77448465 MS.gene06605:CDS 60.0%
GAGAGTAGAGGAGGAGGTGG+TGG + chr3.3:77446748-77446767 MS.gene06605:intron 60.0%
GCCGCAACCGCTGGCATAAA+TGG + chr3.3:77448215-77448234 MS.gene06605:CDS 60.0%
TGTCCTGCGCGATCACTGCC+TGG - chr3.3:77448439-77448458 None:intergenic 65.0%
AGGCCAGGCAGTGATCGCGC+AGG + chr3.3:77448433-77448452 MS.gene06605:CDS 70.0%
CAGCAGTCAGCCGCAACCGC+TGG + chr3.3:77448206-77448225 MS.gene06605:intron 70.0%
GCGCAGGACAGTCACACCGG+AGG + chr3.3:77448449-77448468 MS.gene06605:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 77446661 77450050 77446661 ID=MS.gene06605
chr3.3 mRNA 77446661 77450050 77446661 ID=MS.gene06605.t1;Parent=MS.gene06605
chr3.3 exon 77446661 77446682 77446661 ID=MS.gene06605.t1.exon1;Parent=MS.gene06605.t1
chr3.3 CDS 77446661 77446682 77446661 ID=cds.MS.gene06605.t1;Parent=MS.gene06605.t1
chr3.3 exon 77446782 77446898 77446782 ID=MS.gene06605.t1.exon2;Parent=MS.gene06605.t1
chr3.3 CDS 77446782 77446898 77446782 ID=cds.MS.gene06605.t1;Parent=MS.gene06605.t1
chr3.3 exon 77447707 77447868 77447707 ID=MS.gene06605.t1.exon3;Parent=MS.gene06605.t1
chr3.3 CDS 77447707 77447868 77447707 ID=cds.MS.gene06605.t1;Parent=MS.gene06605.t1
chr3.3 exon 77447965 77448095 77447965 ID=MS.gene06605.t1.exon4;Parent=MS.gene06605.t1
chr3.3 CDS 77447965 77448095 77447965 ID=cds.MS.gene06605.t1;Parent=MS.gene06605.t1
chr3.3 exon 77448209 77448470 77448209 ID=MS.gene06605.t1.exon5;Parent=MS.gene06605.t1
chr3.3 CDS 77448209 77448470 77448209 ID=cds.MS.gene06605.t1;Parent=MS.gene06605.t1
chr3.3 exon 77448557 77448929 77448557 ID=MS.gene06605.t1.exon6;Parent=MS.gene06605.t1
chr3.3 CDS 77448557 77448929 77448557 ID=cds.MS.gene06605.t1;Parent=MS.gene06605.t1
chr3.3 exon 77449137 77449839 77449137 ID=MS.gene06605.t1.exon7;Parent=MS.gene06605.t1
chr3.3 CDS 77449137 77449839 77449137 ID=cds.MS.gene06605.t1;Parent=MS.gene06605.t1
chr3.3 exon 77449943 77450050 77449943 ID=MS.gene06605.t1.exon8;Parent=MS.gene06605.t1
chr3.3 CDS 77449943 77450050 77449943 ID=cds.MS.gene06605.t1;Parent=MS.gene06605.t1
Gene Sequence

>MS.gene06605

ATGGGTGAGGTTGTAATGAGTGGTGAGAAAATAGTAAGATTGGAAGAAGAAGAGGAGAAGGTGAGGGAAGAAGAAGGGAGTGGAACTGAGAGTAGAGGAGGAGGTGGTGGTGAAATGAAAGGGCTTATGAGGTGGGAGAAATTCTTGCCAAAAATGGTTTTGAGGGTGCTTTTGGTTGAAGCTGATGATTGTACAAGACAGATTATTACAGCACTTCTTAGAAAATGCAACTATAAAGGTACTATTTGTATAATTATTATTTTTTCTCTGATTTCATTGTTTTTGTTTTGTAATATTGCTGTGTGTTTAATTGGTTATTCAATTTTCTGTAAGTATTCTCAATTTTCAATTTTATGTGCTCAATTGCTTACTGTCATATGAGCATGTTGCTCTGATTATTCATATTTTTTCATATGTACAATTTTTTTTTTTTTGGTGTTAAATTTGATTTAATTAATTGTAAATATTAGGTTATATTGAGGCTGAGTTGTTAATTAAGAGTATATATTTGACATGACAAAAATAAAAAAAATAAAATAAAAGCTACTAGTAATTAGAAATTTAGAAGTCTTTGGACTGCAAATTTTGTAAAGGATCAAGGCTCAAGGGTGTACTGATAGATTTGTAGATTTTGATGATTTAATAATTACAAAACTTAAGGGGATGGAAAACAAAATTTGTGTGCACAAATTAATTGAAGACATTTTGTTTTTAATATAGTTTGATAAATTTTTAACTCATGAGAAAAAATGTAAAAAATTATGTATGTTTTTTAAAGAGAAGTGACATGGATTTTGTTAGCTGAGAATCCTAGGAATTTATGACACCTTGAAATAGAGTCTTATAGCAGTATGGAAATTACTAGGTTAAGCCATAAACTTGGTACAATTATTCAATTTATTATTCAATTTATATCTGCGATAAAGATTTTATATTATTGAGTTTTATTATCTTGGTTGTATTGTAATTTGAAAAACAAAATTAGTGTACCTGAAAGTAAATCTAAGTTCTAGAACTTCAAAATAACTTTGATCTGTTTTGAGCAGTTGCTGCTGTTGCTGATGGCTTGAAGGCATGGGAAATACTCAAAGGAAGACCGCGCAGTATTGATCTGATACTTACAGAAGTCGATTTGCCAGCCATATCCGGCTACGCACTTCTCACATTAATTATGGAGCATGATATTTGCAAGAGCATCCCTGTCATAAGTATGATATTGAAGATAAATTTTCTTTCTGCTTGTCAATTTTTTTCCTTATTAATACTTAAATTAATTTTTCTGTAATTTTTTCATGCTTTTCCAGTGATGTCGTCGCAAGATTCAGTTAGCACAGTATACAAATGCATGTTGAGAGGTGCAGCTGACTATCTTGTTAAGCCGATTCGAATAAATGAACTAAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCAGTAGGACTTCTGCTCTCTCAATTTTCAGTTCGTTTTCAGTTTCTCTCTAAAATACTAAGAATTTATTAACAAAATTGGGTGAACTTATGTTTATTATTTGTTTACTCTATCAGCAGTCAGCCGCAACCGCTGGCATAAATGGCCCTCAAGATGAAAGTGATACACAACAGAAGTTTGAAGCCACTGCTGAAAACAACGCTGCTAGTAATCGTTCCGGCGGTGATGCTGCTTGCATTCAAAGAAATAAGGACTTAATTGAGAAAGGAAGTGATGCACAGAGCTCTTGTGCTGAAGCATATCCAAGTGAAATAAAGACACAAGAACTTGACATTCATTTAGGCCAGGCAGTGATCGCGCAGGACAGTCACACCGGAGGTAAATTTCTTTCTTTCACAGCAATATCATTTTGTTCGACTCGCAAGGAAGAATTGTCAAAAATTTGAACAAACTTTTATTTTTAGGATTAAGCGTGGCTAACTGCAAAAATGGAGTGGCAAGCACAAATAACTGTAAAAATGGAGAGACAAGCGCAAATAATTGCAAGGACGGCGATGATCAAGAGCATTTTAGGAATGCTAGCATCAGTGGTGAGGTTCATGACAATCACTATGTTCAAATTTACTCTACTACTAAGGAAGCTATTGACTTGATTGGAGCATTTCGTACTGATCCGAATTGCAGTCTCAAAAATTCATCAATTGATTGCACAGGCAAGTTTGACCATTCTCCACAGTTGGATCTTTCTCTCAGAAGCTCTCATCCCAGCAACTTTGAGAAGGATCTCACCGAAGAAAGGCACACCCTTATGCATTCCAATGCTTCAGCTTTCAAACGGTAATTGCTAAATCCCTTTTTATTCTAATTTTTTCGTTTCTGTGTAATTAAAAATTGTTGTACTCTTAGTGACGAGTTTGAAGAACTTCAAAACATGATACGGATGAAGCTAGCAAGTGTATGATTTTTATGCTTGTGGTCTCTATAACTTCTCCGCTTTGTTGAATTCTGCATGCTTATCACTGAAATGGTGTTCCATTCATGCAGGTATACAAACAGGCAATTGCACGCTTCACCTGCAGTAGTAAATAACTTCTCTGATCAACAAAGAGAACAAAAAACAAATAATGAGAACCATAACTCAGATAGTTCAATACCAAGTATGCAAAAAGAATCTGAACTTGCAACTTCACATTCCCAGCAAGGGCATTCTCTCCCAATTCCTGTGAAAGGTGTAAGGTTCAATGATCTTTGTATGGCCTATGGTTCAACACTTCCACCAGGGTTTCGTACACAATCAGGTCCACCATCAATGCCCGGTTCAGTTGTGTTTCTCGAACAAAACTTTCAAGCAGATGCATTTTATCAGTCAAAAGAAAATAATTCAGAGCAGCTTTACAAACCTCGCGGTCCAAATGGAAACAGCACTCCAAACCAAATTGTGTATGCACAGGAACACAAGTCAGAACATCCGGAGGATCAAAGACTTATCTCTCCTACAACTGATCAAAGTGTATCCAGTAGTATTTGTAATAATGGAAATGCCAGCAATTTTAACAGTATTGGTTACGGAAGTAATTGTGGAAGTAGCGGCAATGCGGAACAAGTTGCCACTTTCAGAACAACAGCAGTTTCAGAGGGAAAGAATGAAGACCTCACAAACAGTGGATATTCACATCGAGCTATGCTACGAGAAGCAGCTCTAAACAAGTTCCGTTTGAAAAGAAAAGAGAGATGTTATGAGAAGAAGGTATATCAATATCAATATGAGCTTGTAATTATACTAGCATGATCATTGATCAATGATCATCATTGTTTTCATATTATGCCAACTTATTTATACTTTTTAACAGGTTCGATATGAGAGCAGAAAGAAACTAGCAGAGCAGCGTCCTCGAGTTAAAGGACAATTTGTTCGCCAACCGAATCCTGATTCTCTTTCTGGAGAAAAAGATTGCTAA
Protein sequence

>MS.gene06605.t1

MGEVVMSGLMRWEKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILTEVDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHVWRRQSQSAATAGINGPQDESDTQQKFEATAENNAASNRSGGDAACIQRNKDLIEKGSDAQSSCAEAYPSEIKTQELDIHLGQAVIAQDSHTGGLSVANCKNGVASTNNCKNGETSANNCKDGDDQEHFRNASISGEVHDNHYVQIYSTTKEAIDLIGAFRTDPNCSLKNSSIDCTGKFDHSPQLDLSLRSSHPSNFEKDLTEERHTLMHSNASAFKRYTNRQLHASPAVVNNFSDQQREQKTNNENHNSDSSIPSMQKESELATSHSQQGHSLPIPVKGVRFNDLCMAYGSTLPPGFRTQSGPPSMPGSVVFLEQNFQADAFYQSKENNSEQLYKPRGPNGNSTPNQIVYAQEHKSEHPEDQRLISPTTDQSVSSSICNNGNASNFNSIGYGSNCGSSGNAEQVATFRTTAVSEGKNEDLTNSGYSHRAMLREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQPNPDSLSGEKDC