AlfalfaGEDB | MS.gene050743

M. sativa cultivar XinJiangDaYe / MS.gene050743

KEGG: -
GO: -
PFAM: PF00226.34

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050743.t1	XP_003626177.1	98.2	164	3	0	1	164	1	164	1.80E-83	318.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050743.t1	Q8WWF6	57.6	66	25	1	17	82	4	66	2.8e-13	76.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050743.t1	G7KWI3	98.2	164	3	0	1	164	1	164	1.3e-83	318.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050743	MS.gene050946	0.955772	1.40E-113	-1.69E-46
MS.gene050743	MS.gene054412	0.887697	1.14E-72	-1.69E-46
MS.gene050743	MS.gene058551	0.837526	4.94E-57	-1.69E-46
MS.gene050743	MS.gene06605	0.834344	3.16E-56	-1.69E-46
MS.gene050743	MS.gene06818	0.815716	8.01E-52	-1.69E-46
MS.gene050743	MS.gene072546	0.918014	2.63E-86	-1.69E-46
MS.gene050743	MS.gene25698	0.805575	1.25E-49	-1.69E-46
MS.gene050743	MS.gene30248	0.832592	8.66E-56	-1.69E-46
MS.gene050743	MS.gene62679	0.836306	1.01E-56	-1.69E-46
MS.gene050743	MS.gene85870	0.800498	1.40E-48	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene050743	MS.gene017181	PPI
MS.gene050743	MS.gene065503	PPI
MS.gene050743	MS.gene062293	PPI
MS.gene050743	MS.gene038416	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050743.t1	MTR_7g112360	98.171	164	3	0	1	164	1	164	4.10e-120	335
MS.gene050743.t1	MTR_7g112360	98.936	94	1	0	1	94	1	94	3.60e-65	195
MS.gene050743.t1	MTR_4g085070	60.360	111	42	1	22	130	18	128	1.23e-41	137
MS.gene050743.t1	MTR_8g022310	45.113	133	66	4	8	134	2	133	4.80e-33	116
MS.gene050743.t1	MTR_8g022310	45.113	133	66	4	8	134	2	133	1.15e-32	115
MS.gene050743.t1	MTR_8g022310	45.113	133	66	4	8	134	2	133	1.57e-32	116
MS.gene050743.t1	MTR_8g022310	45.113	133	66	4	8	134	2	133	1.85e-32	115
MS.gene050743.t1	MTR_3g108020	53.030	66	28	1	17	82	5	67	1.10e-18	81.3
MS.gene050743.t1	MTR_2g090705	53.030	66	28	1	17	82	5	67	1.48e-17	78.6
MS.gene050743.t1	MTR_4g078850	48.485	66	31	1	17	82	5	67	5.65e-17	77.0
MS.gene050743.t1	MTR_2g014470	46.970	66	32	1	17	82	5	67	7.74e-17	76.3
MS.gene050743.t1	MTR_4g015840	53.030	66	28	1	17	82	5	67	1.31e-16	75.9
MS.gene050743.t1	MTR_1g110310	40.000	90	50	1	1	90	1	86	4.75e-16	74.7
MS.gene050743.t1	MTR_4g109510	45.588	68	37	0	16	83	8	75	4.83e-16	74.7
MS.gene050743.t1	MTR_2g014480	48.485	66	31	1	17	82	5	67	5.24e-16	74.3
MS.gene050743.t1	MTR_5g037880	44.286	70	35	1	17	82	6	75	5.05e-15	70.9
MS.gene050743.t1	MTR_6g027110	44.776	67	36	1	17	82	3	69	6.98e-15	68.2
MS.gene050743.t1	MTR_7g101070	48.529	68	32	1	17	84	359	423	7.98e-15	71.2
MS.gene050743.t1	MTR_1g052110	44.737	76	38	2	7	82	29	100	2.59e-14	68.9
MS.gene050743.t1	MTR_3g087030	50.000	66	28	2	17	82	83	143	2.65e-14	69.7
MS.gene050743.t1	MTR_7g092380	50.769	65	28	2	18	82	24	84	5.91e-14	67.8
MS.gene050743.t1	MTR_7g109340	48.485	66	30	2	17	82	27	88	4.20e-13	65.9
MS.gene050743.t1	MTR_8g081620	46.970	66	33	1	17	82	61	124	8.08e-13	63.5
MS.gene050743.t1	MTR_4g023470	48.485	66	30	1	17	82	87	148	1.33e-12	64.7
MS.gene050743.t1	MTR_6g026940	43.284	67	37	1	17	82	3	69	1.40e-12	62.8
MS.gene050743.t1	MTR_5g065860	43.836	73	37	1	12	84	44	112	1.67e-12	61.6
MS.gene050743.t1	MTR_3g027580	46.970	66	31	1	17	82	90	151	1.84e-12	64.3
MS.gene050743.t1	MTR_6g027030	43.284	67	37	1	17	82	3	69	2.00e-12	63.2
MS.gene050743.t1	MTR_5g035770	37.975	79	45	1	18	96	27	101	4.19e-12	63.2
MS.gene050743.t1	MTR_5g065160	43.939	66	33	1	17	82	84	145	4.19e-12	63.5
MS.gene050743.t1	MTR_5g065160	43.939	66	33	1	17	82	83	144	4.35e-12	63.2
MS.gene050743.t1	MTR_5g065160	43.939	66	33	1	17	82	77	138	5.23e-12	63.2
MS.gene050743.t1	MTR_5g065160	43.939	66	33	1	17	82	84	145	5.79e-12	63.2
MS.gene050743.t1	MTR_8g006430	39.080	87	45	1	5	91	3	81	1.20e-11	62.0
MS.gene050743.t1	MTR_2g104030	46.377	69	32	2	14	82	68	131	1.52e-11	61.6
MS.gene050743.t1	MTR_4g076240	41.463	82	32	1	18	83	956	1037	5.82e-11	60.1
MS.gene050743.t1	MTR_8g037810	34.921	126	63	4	13	123	3	124	6.12e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050743.t1	AT1G56300	71.069	159	43	2	1	159	1	156	2.39e-71	212
MS.gene050743.t1	AT1G56300	77.679	112	22	2	1	112	1	109	1.44e-52	163
MS.gene050743.t1	AT1G71000	51.748	143	53	4	10	139	3	142	9.09e-40	132
MS.gene050743.t1	AT1G71000	44.025	159	80	4	10	163	3	157	8.50e-38	127
MS.gene050743.t1	AT3G14200	47.967	123	58	3	18	135	14	135	1.19e-32	116
MS.gene050743.t1	AT1G72416	40.816	98	56	2	18	115	7	102	1.57e-22	89.0
MS.gene050743.t1	AT1G72416	40.816	98	56	2	18	115	7	102	1.74e-22	89.0
MS.gene050743.t1	AT1G72416	40.816	98	56	2	18	115	7	102	3.78e-22	88.6
MS.gene050743.t1	AT1G72416	42.222	90	50	2	18	107	7	94	1.29e-21	86.7
MS.gene050743.t1	AT5G25530	37.594	133	67	3	17	149	5	121	2.32e-19	83.6
MS.gene050743.t1	AT1G10350	50.000	66	30	1	17	82	5	67	1.94e-17	78.2
MS.gene050743.t1	AT3G08910	53.030	66	28	1	17	82	5	67	2.77e-17	77.4
MS.gene050743.t1	AT4G28480	53.030	66	28	1	17	82	5	67	2.99e-17	77.0
MS.gene050743.t1	AT1G59725	52.239	67	28	2	17	82	5	68	4.74e-17	77.0
MS.gene050743.t1	AT4G28480	53.030	66	28	1	17	82	5	67	4.83e-17	77.0
MS.gene050743.t1	AT2G20560	53.030	66	28	1	17	82	5	67	1.08e-16	76.3
MS.gene050743.t1	AT5G25530	35.461	141	67	4	17	149	5	129	1.28e-16	75.9
MS.gene050743.t1	AT5G01390	50.000	66	30	1	17	82	5	67	2.62e-16	73.9
MS.gene050743.t1	AT5G01390	50.000	66	30	1	17	82	5	67	3.50e-16	73.9
MS.gene050743.t1	AT5G01390	50.000	66	30	1	17	82	5	67	3.80e-16	73.2
MS.gene050743.t1	AT5G01390	50.000	66	30	1	17	82	5	67	6.99e-16	73.9
MS.gene050743.t1	AT3G47940	49.254	67	30	2	17	82	5	68	3.33e-15	72.0
MS.gene050743.t1	AT2G33735	38.298	94	54	1	17	110	23	112	1.27e-14	66.6
MS.gene050743.t1	AT2G33735	38.298	94	54	1	17	110	23	112	1.27e-14	66.6
MS.gene050743.t1	AT2G41000	43.478	69	38	1	17	84	4	72	1.53e-14	68.2
MS.gene050743.t1	AT5G16650	43.750	80	40	2	9	87	4	79	1.67e-14	66.6
MS.gene050743.t1	AT2G41000	43.478	69	38	1	17	84	4	72	2.74e-14	67.8
MS.gene050743.t1	AT5G03160	45.205	73	37	1	12	84	366	435	4.00e-14	69.3
MS.gene050743.t1	AT3G12170	44.000	75	38	1	8	82	3	73	5.24e-14	67.8
MS.gene050743.t1	AT1G24120	37.975	79	45	1	18	96	22	96	5.43e-14	68.9
MS.gene050743.t1	AT2G22360	48.485	66	29	2	17	82	87	147	5.52e-14	68.9
MS.gene050743.t1	AT5G16650	43.750	80	40	2	9	87	4	79	5.54e-14	66.2
MS.gene050743.t1	AT5G06910	45.205	73	36	1	10	82	23	91	7.94e-14	67.8
MS.gene050743.t1	AT1G74250	41.026	78	45	1	7	83	2	79	8.19e-14	68.6
MS.gene050743.t1	AT3G12170	44.000	75	38	1	8	82	39	109	2.17e-13	66.6
MS.gene050743.t1	AT1G68370	42.466	73	38	1	18	90	19	87	2.54e-13	67.0
MS.gene050743.t1	AT4G39960	48.485	66	29	2	17	82	86	146	9.51e-13	65.5
MS.gene050743.t1	AT4G39960	48.485	66	29	2	17	82	86	146	9.51e-13	65.5
MS.gene050743.t1	AT3G62600	48.485	66	30	1	17	82	27	88	1.38e-12	64.7
MS.gene050743.t1	AT5G12430	46.154	91	27	4	18	92	1026	1110	3.42e-12	63.9
MS.gene050743.t1	AT1G59980	42.424	66	34	1	18	83	25	86	5.91e-12	62.8
MS.gene050743.t1	AT1G59980	42.424	66	34	1	18	83	25	86	6.24e-12	62.8
MS.gene050743.t1	AT5G48030	38.667	75	42	1	17	91	95	165	1.05e-11	62.4
MS.gene050743.t1	AT1G80030	42.424	66	33	2	17	82	76	136	2.84e-11	61.2
MS.gene050743.t1	AT1G80030	42.424	66	33	2	17	82	76	136	3.27e-11	60.8
MS.gene050743.t1	AT1G80030	42.424	66	33	2	17	82	76	136	3.27e-11	60.8
MS.gene050743.t1	AT1G80030	42.424	66	33	2	17	82	76	136	3.27e-11	60.8
MS.gene050743.t1	AT1G28210	38.272	81	44	2	6	86	40	114	3.83e-11	60.5
MS.gene050743.t1	AT1G28210	38.272	81	44	2	6	86	40	114	4.13e-11	60.5
MS.gene050743.t1	AT2G21510	41.429	70	37	1	13	82	3	68	4.64e-11	60.1
MS.gene050743.t1	AT2G21510	41.429	70	37	1	13	82	3	68	4.64e-11	60.1
MS.gene050743.t1	AT1G28210	38.272	81	44	2	6	86	40	114	4.95e-11	60.5
MS.gene050743.t1	AT2G21510	41.429	70	37	1	13	82	3	68	5.05e-11	60.1
MS.gene050743.t1	AT2G21510	41.429	70	37	1	13	82	3	68	5.05e-11	60.1
MS.gene050743.t1	AT2G21510	41.429	70	37	1	13	82	3	68	5.52e-11	60.1
MS.gene050743.t1	AT4G39150	42.857	70	36	1	13	82	3	68	7.89e-11	59.7
MS.gene050743.t1	AT4G39150	42.857	70	36	1	13	82	3	68	7.89e-11	59.7
MS.gene050743.t1	AT4G39150	42.857	70	36	1	13	82	3	68	7.89e-11	59.7

Find 36 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTGCTATTACTCTGTTCT+TGG	0.198681	7.2:-4552730	MS.gene050743:CDS
GGATTTCGAGCGAATTTATC+AGG	0.209743	7.2:+4552550	None:intergenic
CAAATTCAAGAAGCATATTC+AGG	0.256213	7.2:-4552493	MS.gene050743:intron
TTGGCTTCTCCGGCAGTTGT+AGG	0.330200	7.2:+4552529	None:intergenic
TCTTCCCAGCCGTCTGATCT+TGG	0.344100	7.2:+4551647	None:intergenic
GCGGCAATGATTGCTGCGCT+TGG	0.404589	7.2:+4551591	None:intergenic
AATTTGCTGAAACCGTCGTT+TGG	0.414220	7.2:+4552510	None:intergenic
GTTGAGATGGTAGGTGGAGA+TGG	0.451612	7.2:-4551688	MS.gene050743:CDS
ACAAAGGATGTTTGTTGAGA+TGG	0.470153	7.2:-4551701	MS.gene050743:CDS
AAACCGTCGTTTGGCTTCTC+CGG	0.481969	7.2:+4552519	None:intergenic
TTGAACCAAGATCAGACGGC+TGG	0.499992	7.2:-4551652	MS.gene050743:CDS
AAAAGATCAATGTACGATGC+TGG	0.500396	7.2:-4552360	MS.gene050743:CDS
TGCTTACCGCAAACTCGCTA+TGG	0.507423	7.2:-4552671	MS.gene050743:intron
CGTTTACCATAGCGAGTTTG+CGG	0.522874	7.2:+4552665	None:intergenic
GATCAGACGGCTGGGAAGAG+AGG	0.537894	7.2:-4551643	MS.gene050743:CDS
AGTGCGAATATCAGAGGAGG+AGG	0.553290	7.2:+4552693	None:intergenic
ACTTGGTCTTCTTCTTCAAG+AGG	0.556126	7.2:+4552327	None:intergenic
GCTCGAAATCCTACAACTGC+CGG	0.560164	7.2:-4552538	MS.gene050743:CDS
GGGAAGAGAGGACGCTCAAG+TGG	0.569154	7.2:-4551631	MS.gene050743:CDS
TGATTTGAACCAAGATCAGA+CGG	0.588129	7.2:-4551656	MS.gene050743:CDS
AGAAGATCTACTACCACCGT+TGG	0.599024	7.2:+4552750	None:intergenic
GATGAATAATGTCAAAGATG+AGG	0.606591	7.2:-4551874	MS.gene050743:intron
GATTTCGAGCGAATTTATCA+GGG	0.606606	7.2:+4552551	None:intergenic
TGAACCAAGATCAGACGGCT+GGG	0.607458	7.2:-4551651	MS.gene050743:CDS
CAAGAAGGAGGAGGATCCAA+CGG	0.620400	7.2:-4552766	MS.gene050743:CDS
GGACGCTCAAGTGGATCAAG+AGG	0.624597	7.2:-4551622	MS.gene050743:CDS
ATGTTTGTTGAGATGGTAGG+TGG	0.628226	7.2:-4551694	MS.gene050743:CDS
GTAAGCAGTGCGAATATCAG+AGG	0.644250	7.2:+4552687	None:intergenic
CCAACGGTGATGGATCAAGA+AGG	0.647408	7.2:-4552781	None:intergenic
AGGATGTTTGTTGAGATGGT+AGG	0.652987	7.2:-4551697	MS.gene050743:CDS
AGCAGTGCGAATATCAGAGG+AGG	0.654808	7.2:+4552690	None:intergenic
GTGATGGATCAAGAAGGAGG+AGG	0.667540	7.2:-4552775	MS.gene050743:CDS
ACGGTGATGGATCAAGAAGG+AGG	0.684880	7.2:-4552778	None:intergenic
ACAGTTTGGAGGATCTACAA+AGG	0.691000	7.2:-4551717	MS.gene050743:CDS
CTGCCGGAGAAGCCAAACGA+CGG	0.702205	7.2:-4552522	MS.gene050743:CDS
GAAGGAGGAGGATCCAACGG+TGG	0.737111	7.2:-4552763	MS.gene050743:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTAAAATAAAAATTAAAAA+AGG	+	chr7.2:4552220-4552239	None:intergenic	0.0%
!!!	TCATTTTTTTTTACCAAAAA+AGG	+	chr7.2:4552536-4552555	None:intergenic	15.0%
!!!	TTTTTGGTAAAAAAAAATGA+AGG	-	chr7.2:4552536-4552555	MS.gene050743:CDS	15.0%
!!	AATATAAATGAGTAAAACGA+CGG	+	chr7.2:4551721-4551740	None:intergenic	20.0%
!!	ATATGAGATTGATTATTGAT+TGG	-	chr7.2:4551937-4551956	MS.gene050743:intron	20.0%
!!	TTCTATAGATAGTAATGAAT+TGG	-	chr7.2:4551909-4551928	MS.gene050743:CDS	20.0%
!!!	TGGATTCTAATTCTAATTTT+AGG	-	chr7.2:4552404-4552423	MS.gene050743:intron	20.0%
!	AAAAATATCTTGTGCATGTT+TGG	-	chr7.2:4552253-4552272	MS.gene050743:intron	25.0%
!	ATTAAAAAAGGCAAAGCAAA+TGG	+	chr7.2:4552208-4552227	None:intergenic	25.0%
!	CAAAATTTGTGTTATAATGC+AGG	-	chr7.2:4552429-4552448	MS.gene050743:intron	25.0%
!	TTAAAAAAGGCAAAGCAAAT+GGG	+	chr7.2:4552207-4552226	None:intergenic	25.0%
!	TTGTTGAATTTGAAAAGAGA+TGG	-	chr7.2:4551784-4551803	MS.gene050743:intron	25.0%
!!!	GTTCTAATTGTTTCCTTTTT+TGG	-	chr7.2:4552520-4552539	MS.gene050743:CDS	25.0%
!!!	TGGTATTTTCTGGTTATTTA+GGG	-	chr7.2:4552618-4552637	MS.gene050743:intron	25.0%
!!!	TTGATTGGTTTTAATGTTGT+TGG	-	chr7.2:4551952-4551971	MS.gene050743:intron	25.0%
!!!	TTGGTATTTTCTGGTTATTT+AGG	-	chr7.2:4552617-4552636	MS.gene050743:intron	25.0%
	AAGAAGAATTGTTACGAACT+TGG	+	chr7.2:4552053-4552072	None:intergenic	30.0%
	ACAAGACGAGAAAAACAATA+GGG	+	chr7.2:4552164-4552183	None:intergenic	30.0%
	AGTTAGGTGCATTTGAATAT+TGG	-	chr7.2:4552384-4552403	MS.gene050743:intron	30.0%
	CAAAGATGAGGTATACTATT+GGG	-	chr7.2:4552498-4552517	MS.gene050743:CDS	30.0%
	GATGAATAATGTCAAAGATG+AGG	-	chr7.2:4552486-4552505	MS.gene050743:intron	30.0%
	TCAAAGATGAGGTATACTAT+TGG	-	chr7.2:4552497-4552516	MS.gene050743:CDS	30.0%
!	AAACACGTGATTTTGTTGAA+AGG	-	chr7.2:4552285-4552304	MS.gene050743:intron	30.0%
!	CAAATTCAAGAAGCATATTC+AGG	-	chr7.2:4551867-4551886	MS.gene050743:intron	30.0%
!!	ATGTATTGTTGATGATGTGA+TGG	-	chr7.2:4552588-4552607	MS.gene050743:intron	30.0%
!!	TGTATTGTTGATGATGTGAT+GGG	-	chr7.2:4552589-4552608	MS.gene050743:intron	30.0%
!!!	GGTATTTTCTGGTTATTTAG+GGG	-	chr7.2:4552619-4552638	MS.gene050743:intron	30.0%
!!!	GTATTTTCTGGTTATTTAGG+GGG	-	chr7.2:4552620-4552639	MS.gene050743:intron	30.0%
!!!	GTTTTACCTCGTTTTGTTTA+CGG	+	chr7.2:4552117-4552136	None:intergenic	30.0%
	AAAAGATCAATGTACGATGC+TGG	-	chr7.2:4552000-4552019	MS.gene050743:intron	35.0%
	ACAAAATCACGTGTTTACAG+TGG	+	chr7.2:4552281-4552300	None:intergenic	35.0%
	ATGGGAATCATGTATGTTAC+CGG	+	chr7.2:4552189-4552208	None:intergenic	35.0%
	CACAAGACGAGAAAAACAAT+AGG	+	chr7.2:4552165-4552184	None:intergenic	35.0%
	GATTTCGAGCGAATTTATCA+GGG	+	chr7.2:4551812-4551831	None:intergenic	35.0%
	TGATTTGAACCAAGATCAGA+CGG	-	chr7.2:4552704-4552723	MS.gene050743:CDS	35.0%
!	ACAAAGGATGTTTGTTGAGA+TGG	-	chr7.2:4552659-4552678	MS.gene050743:intron	35.0%
!	ATTTTGCCGTAAACAAAACG+AGG	-	chr7.2:4552108-4552127	MS.gene050743:intron	35.0%
!!	GTATTGTTGATGATGTGATG+GGG	-	chr7.2:4552590-4552609	MS.gene050743:intron	35.0%
!!	TCTTGCTATTACTCTGTTCT+TGG	-	chr7.2:4551630-4551649	MS.gene050743:CDS	35.0%
!!!	TGGGGTATTTTGGTATTTTC+TGG	-	chr7.2:4552608-4552627	MS.gene050743:intron	35.0%
	ACAGTTTGGAGGATCTACAA+AGG	-	chr7.2:4552643-4552662	MS.gene050743:intron	40.0%
	AGAAAAACAATAGGGTCGTC+TGG	+	chr7.2:4552156-4552175	None:intergenic	40.0%
	GGATTTCGAGCGAATTTATC+AGG	+	chr7.2:4551813-4551832	None:intergenic	40.0%
!	ACTTGGTCTTCTTCTTCAAG+AGG	+	chr7.2:4552036-4552055	None:intergenic	40.0%
!	AGGATGTTTGTTGAGATGGT+AGG	-	chr7.2:4552663-4552682	MS.gene050743:intron	40.0%
!	ATGTTTGTTGAGATGGTAGG+TGG	-	chr7.2:4552666-4552685	MS.gene050743:intron	40.0%
!	TGTTTTTCTCGTCTTGTGTC+CGG	-	chr7.2:4552167-4552186	MS.gene050743:intron	40.0%
!!	AATTTGCTGAAACCGTCGTT+TGG	+	chr7.2:4551853-4551872	None:intergenic	40.0%
!!	GATGATGTGATGGGGTATTT+TGG	-	chr7.2:4552598-4552617	MS.gene050743:intron	40.0%
!!!	GAGGTAAAACTGTGTCGTTT+TGG	-	chr7.2:4552127-4552146	MS.gene050743:intron	40.0%
	AGAAGATCTACTACCACCGT+TGG	+	chr7.2:4551613-4551632	None:intergenic	45.0%
	CGTTTACCATAGCGAGTTTG+CGG	+	chr7.2:4551698-4551717	None:intergenic	45.0%
	CTTGTAGTGCAGCTCAAGTT+AGG	-	chr7.2:4552368-4552387	MS.gene050743:CDS	45.0%
	GGTTATTTAGGGGGACAGTT+TGG	-	chr7.2:4552629-4552648	MS.gene050743:intron	45.0%
	GTAAGCAGTGCGAATATCAG+AGG	+	chr7.2:4551676-4551695	None:intergenic	45.0%
	TATTTAGGGGGACAGTTTGG+AGG	-	chr7.2:4552632-4552651	MS.gene050743:intron	45.0%
	TCGTTTCAGTTGCAGAGCAT+GGG	-	chr7.2:4552074-4552093	MS.gene050743:intron	45.0%
	TTCGTTTCAGTTGCAGAGCA+TGG	-	chr7.2:4552073-4552092	MS.gene050743:intron	45.0%
	AGCAGTGCGAATATCAGAGG+AGG	+	chr7.2:4551673-4551692	None:intergenic	50.0%
	AGTGCGAATATCAGAGGAGG+AGG	+	chr7.2:4551670-4551689	None:intergenic	50.0%
	CAAGAAGGAGGAGGATCCAA+CGG	-	chr7.2:4551594-4551613	MS.gene050743:CDS	50.0%
	CGTTTCAGTTGCAGAGCATG+GGG	-	chr7.2:4552075-4552094	MS.gene050743:intron	50.0%
	GCTCGAAATCCTACAACTGC+CGG	-	chr7.2:4551822-4551841	MS.gene050743:intron	50.0%
	GTTGAGATGGTAGGTGGAGA+TGG	-	chr7.2:4552672-4552691	MS.gene050743:CDS	50.0%
	TGAACCAAGATCAGACGGCT+GGG	-	chr7.2:4552709-4552728	MS.gene050743:CDS	50.0%
	TGCTTACCGCAAACTCGCTA+TGG	-	chr7.2:4551689-4551708	MS.gene050743:CDS	50.0%
	TTGAACCAAGATCAGACGGC+TGG	-	chr7.2:4552708-4552727	MS.gene050743:CDS	50.0%
!	AAACCGTCGTTTGGCTTCTC+CGG	+	chr7.2:4551844-4551863	None:intergenic	50.0%
	GGACGCTCAAGTGGATCAAG+AGG	-	chr7.2:4552738-4552757	MS.gene050743:CDS	55.0%
	TCTTCCCAGCCGTCTGATCT+TGG	+	chr7.2:4552716-4552735	None:intergenic	55.0%
	TTGGCTTCTCCGGCAGTTGT+AGG	+	chr7.2:4551834-4551853	None:intergenic	55.0%
	CTGCCGGAGAAGCCAAACGA+CGG	-	chr7.2:4551838-4551857	MS.gene050743:intron	60.0%
	GAAGGAGGAGGATCCAACGG+TGG	-	chr7.2:4551597-4551616	MS.gene050743:CDS	60.0%
	GATCAGACGGCTGGGAAGAG+AGG	-	chr7.2:4552717-4552736	MS.gene050743:CDS	60.0%
	GCGGCAATGATTGCTGCGCT+TGG	+	chr7.2:4552772-4552791	None:intergenic	60.0%
	GGGAAGAGAGGACGCTCAAG+TGG	-	chr7.2:4552729-4552748	MS.gene050743:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.2	gene	4551588	4552794	4551588	ID=MS.gene050743
chr7.2	mRNA	4551588	4552794	4551588	ID=MS.gene050743.t1;Parent=MS.gene050743
chr7.2	exon	4552672	4552794	4552672	ID=MS.gene050743.t1.exon1;Parent=MS.gene050743.t1
chr7.2	CDS	4552672	4552794	4552672	ID=cds.MS.gene050743.t1;Parent=MS.gene050743.t1
chr7.2	exon	4552494	4552581	4552494	ID=MS.gene050743.t1.exon2;Parent=MS.gene050743.t1
chr7.2	CDS	4552494	4552581	4552494	ID=cds.MS.gene050743.t1;Parent=MS.gene050743.t1
chr7.2	exon	4552329	4552399	4552329	ID=MS.gene050743.t1.exon3;Parent=MS.gene050743.t1
chr7.2	CDS	4552329	4552399	4552329	ID=cds.MS.gene050743.t1;Parent=MS.gene050743.t1
chr7.2	exon	4551875	4551931	4551875	ID=MS.gene050743.t1.exon4;Parent=MS.gene050743.t1
chr7.2	CDS	4551875	4551931	4551875	ID=cds.MS.gene050743.t1;Parent=MS.gene050743.t1
chr7.2	exon	4551588	4551743	4551588	ID=MS.gene050743.t1.exon5;Parent=MS.gene050743.t1
chr7.2	CDS	4551588	4551743	4551588	ID=cds.MS.gene050743.t1;Parent=MS.gene050743.t1

Gene Sequence

>MS.gene050743

ATGGATCAAGAAGGAGGAGGATCCAACGGTGGTAGTAGATCTTCTTGCTATTACTCTGTTCTTGGTATTCGCAGTGATGCCTCCTCCTCTGATATTCGCACTGCTTACCGCAAACTCGCTATGGTAAACGCCGTCGTTTTACTCATTTATATTATTATATATTCACTTTAAATAAATAAATAAATAATTAAATTTATTGTTGAATTTGAAAAGAGATGGCACCCTGATAAATTCGCTCGAAATCCTACAACTGCCGGAGAAGCCAAACGACGGTTTCAGCAAATTCAAGAAGCATATTCAGGTTTGTTTCAAATTCAAATTTTCTATAGATAGTAATGAATTGGATTTGATATGAGATTGATTATTGATTGGTTTTAATGTTGTTGGTGAAATAGTTCTCTCTGACGATTCTAAAAGATCAATGTACGATGCTGGACTATACGATCCTCTTGAAGAAGAAGACCAAGTTCGTAACAATTCTTCTTTTCGTTTCAGTTGCAGAGCATGGGGCAAAGATTAGATTTTGCCGTAAACAAAACGAGGTAAAACTGTGTCGTTTTGGTTACCAGACGACCCTATTGTTTTTCTCGTCTTGTGTCCGGTAACATACATGATTCCCATTTGCTTTGCCTTTTTTAATTTTTATTTTAATCTTTTTCTTTAAAAAAAATATCTTGTGCATGTTTGGAACCACTGTAAACACGTGATTTTGTTGAAAGGTCTGTAAAATCAATTGTTTTGTGATTCTATCAAATTTACTGTGAAACAAACATGCACTCACTTGTAGTGCAGCTCAAGTTAGGTGCATTTGAATATTGGATTCTAATTCTAATTTTAGGAACAAAATTTGTGTTATAATGCAGGAATTTTGTGATTTTATGAGCGAAATGATCTCAATGATGAATAATGTCAAAGATGAGGTATACTATTGGGTTCTAATTGTTTCCTTTTTTGGTAAAAAAAAATGAAGGAGAAAATAGTAAATTTAAAAAATAGATTGATGTATTGTTGATGATGTGATGGGGTATTTTGGTATTTTCTGGTTATTTAGGGGGACAGTTTGGAGGATCTACAAAGGATGTTTGTTGAGATGGTAGGTGGAGATGGTATGAACTTTGATTTGAACCAAGATCAGACGGCTGGGAAGAGAGGACGCTCAAGTGGATCAAGAGGCAACGCAGCCAAGCGCAGCAATCATTGCCGCTAG

Protein sequence

>MS.gene050743.t1

MDQEGGGSNGGSRSSCYYSVLGIRSDASSSDIRTAYRKLAMRWHPDKFARNPTTAGEAKRRFQQIQEAYSVLSDDSKRSMYDAGLYDPLEEEDQEFCDFMSEMISMMNNVKDEGDSLEDLQRMFVEMVGGDGMNFDLNQDQTAGKRGRSSGSRGNAAKRSNHCR