Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066243.t1 | RHN81724.1 | 96.6 | 297 | 10 | 0 | 1 | 297 | 1 | 297 | 2.50E-168 | 601.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066243.t1 | P23472 | 68.0 | 300 | 92 | 3 | 1 | 297 | 1 | 299 | 9.6e-121 | 434.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066243.t1 | G7IDV3 | 96.6 | 297 | 10 | 0 | 1 | 297 | 1 | 297 | 1.8e-168 | 601.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051946 | MS.gene066243 | 0.81635 | 5.79E-52 | -1.69E-46 |
| MS.gene056310 | MS.gene066243 | 0.811989 | 5.31E-51 | -1.69E-46 |
| MS.gene056313 | MS.gene066243 | 0.801128 | 1.04E-48 | -1.69E-46 |
| MS.gene058157 | MS.gene066243 | -0.813142 | 2.97E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene066243 | 0.810963 | 8.87E-51 | -1.69E-46 |
| MS.gene058173 | MS.gene066243 | 0.810135 | 1.34E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene066243 | 0.809133 | 2.20E-50 | -1.69E-46 |
| MS.gene059045 | MS.gene066243 | 0.802647 | 5.08E-49 | -1.69E-46 |
| MS.gene060187 | MS.gene066243 | 0.811916 | 5.51E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066243.t1 | MTR_1g099320 | 96.633 | 297 | 10 | 0 | 1 | 297 | 1 | 297 | 0.0 | 566 |
| MS.gene066243.t1 | MTR_1g099350 | 70.805 | 298 | 79 | 4 | 1 | 297 | 1 | 291 | 5.10e-149 | 419 |
| MS.gene066243.t1 | MTR_0027s0260 | 67.708 | 288 | 87 | 4 | 7 | 293 | 12 | 294 | 1.45e-139 | 395 |
| MS.gene066243.t1 | MTR_8g055940 | 68.440 | 282 | 84 | 3 | 13 | 293 | 16 | 293 | 6.07e-137 | 389 |
| MS.gene066243.t1 | MTR_1g099310 | 65.188 | 293 | 96 | 6 | 7 | 297 | 8 | 296 | 8.79e-135 | 384 |
| MS.gene066243.t1 | MTR_5g043550 | 63.946 | 294 | 101 | 3 | 1 | 293 | 1 | 290 | 8.11e-133 | 379 |
| MS.gene066243.t1 | MTR_7g116350 | 61.986 | 292 | 95 | 2 | 7 | 297 | 8 | 284 | 2.20e-124 | 374 |
| MS.gene066243.t1 | MTR_1g099290 | 63.158 | 285 | 100 | 5 | 13 | 295 | 15 | 296 | 3.66e-124 | 367 |
| MS.gene066243.t1 | MTR_8g467650 | 62.284 | 289 | 105 | 3 | 7 | 293 | 8 | 294 | 2.93e-123 | 354 |
| MS.gene066243.t1 | MTR_2g102020 | 57.667 | 300 | 116 | 5 | 8 | 297 | 15 | 313 | 2.14e-120 | 349 |
| MS.gene066243.t1 | MTR_7g116850 | 56.701 | 291 | 121 | 4 | 11 | 297 | 37 | 326 | 8.42e-114 | 332 |
| MS.gene066243.t1 | MTR_2g040740 | 55.634 | 284 | 118 | 4 | 14 | 293 | 16 | 295 | 7.48e-105 | 309 |
| MS.gene066243.t1 | MTR_2g040830 | 53.684 | 285 | 123 | 5 | 14 | 293 | 16 | 296 | 1.53e-98 | 293 |
| MS.gene066243.t1 | MTR_2g040690 | 52.982 | 285 | 125 | 5 | 14 | 293 | 18 | 298 | 4.60e-98 | 291 |
| MS.gene066243.t1 | MTR_6g023340 | 50.000 | 286 | 134 | 7 | 18 | 297 | 20 | 302 | 3.16e-93 | 278 |
| MS.gene066243.t1 | MTR_2g040650 | 48.421 | 285 | 134 | 6 | 14 | 293 | 16 | 292 | 2.45e-86 | 261 |
| MS.gene066243.t1 | MTR_2g040870 | 49.057 | 159 | 77 | 2 | 16 | 174 | 15 | 169 | 3.22e-41 | 140 |
| MS.gene066243.t1 | MTR_2g040880 | 52.212 | 113 | 49 | 3 | 186 | 293 | 1 | 113 | 1.62e-35 | 125 |
| MS.gene066243.t1 | MTR_2g040890 | 42.683 | 164 | 83 | 6 | 9 | 166 | 8 | 166 | 5.20e-35 | 125 |
| MS.gene066243.t1 | MTR_2g040850 | 45.033 | 151 | 73 | 3 | 2 | 145 | 3 | 150 | 2.35e-31 | 117 |
| MS.gene066243.t1 | MTR_2g040900 | 47.500 | 120 | 57 | 4 | 180 | 293 | 18 | 137 | 4.60e-28 | 106 |
| MS.gene066243.t1 | MTR_4g077310 | 53.933 | 89 | 37 | 4 | 207 | 293 | 3 | 89 | 2.17e-23 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066243.t1 | AT5G24090 | 64.000 | 300 | 104 | 3 | 1 | 297 | 4 | 302 | 1.68e-143 | 406 |
Find 59 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTTTGATTCCTTTATTT+TGG | 0.131017 | 1.1:-71504510 | None:intergenic |
| TTGTGAATTCATGGAATAAA+TGG | 0.242224 | 1.1:+71504899 | MS.gene066243:CDS |
| AACTTGGTTCCACCGAAAAT+TGG | 0.244758 | 1.1:+71504689 | MS.gene066243:CDS |
| CTTTCAATTGGTGGTGGAAT+TGG | 0.287500 | 1.1:+71504535 | MS.gene066243:CDS |
| AGGTTCCTTCGTTGCCATTT+TGG | 0.290608 | 1.1:-71504330 | None:intergenic |
| GCAATCTATTGGGGCCAAAA+TGG | 0.300822 | 1.1:+71504316 | MS.gene066243:CDS |
| GGGTATAGCACTTCTATTAT+TGG | 0.304491 | 1.1:+71505096 | MS.gene066243:CDS |
| TGACCTGCGAGATTCATTTC+AGG | 0.305610 | 1.1:-71504430 | None:intergenic |
| TAACTAACCTTGTGAATTCA+TGG | 0.311751 | 1.1:+71504890 | MS.gene066243:CDS |
| AATCCACCTTGTCAATATAA+TGG | 0.323098 | 1.1:+71504862 | MS.gene066243:CDS |
| CTGGTGGCATAGCAATCTAT+TGG | 0.352724 | 1.1:+71504305 | MS.gene066243:CDS |
| ATCAAAGATTGCCAAAATAA+AGG | 0.357615 | 1.1:+71504499 | MS.gene066243:CDS |
| GACCGTTACCGAATTTGTTT+AGG | 0.359199 | 1.1:-71504402 | None:intergenic |
| TTGGGCACTGCACTTGAAAC+AGG | 0.362436 | 1.1:+71504805 | MS.gene066243:CDS |
| TGGTGGCATAGCAATCTATT+GGG | 0.384033 | 1.1:+71504306 | MS.gene066243:CDS |
| GAAAATTGGCAACACCTTGC+AGG | 0.393402 | 1.1:+71504703 | MS.gene066243:CDS |
| ATAGCTTTCCTAAACAAATT+CGG | 0.403876 | 1.1:+71504394 | MS.gene066243:CDS |
| TGCCGGAATAAAACCACTTC+CGG | 0.411953 | 1.1:-71504980 | None:intergenic |
| GGTTGCGCATGCTTCGGATA+AGG | 0.415599 | 1.1:-71504350 | None:intergenic |
| CTACTCTTTATCTTCAATTG+AGG | 0.422344 | 1.1:+71504561 | MS.gene066243:CDS |
| AAGTCATCTTCAAGACCATT+AGG | 0.427426 | 1.1:+71504631 | MS.gene066243:CDS |
| TTATCCGAAGCATGCGCAAC+CGG | 0.438403 | 1.1:+71504352 | MS.gene066243:CDS |
| TCTACAGCGGCGGCCGGAAG+TGG | 0.441284 | 1.1:+71504967 | MS.gene066243:CDS |
| TCTAAAACAGCATCACCTAA+TGG | 0.445847 | 1.1:-71504646 | None:intergenic |
| CCGGCATCTACAGCGGCGGC+CGG | 0.451172 | 1.1:+71504961 | MS.gene066243:CDS |
| AGGTTTCATGATTTGCAGAC+TGG | 0.456803 | 1.1:+71505075 | MS.gene066243:CDS |
| GTGCATGAATTTGGAAGTGA+TGG | 0.468935 | 1.1:-71504460 | None:intergenic |
| TGGACTAGCACTGTTCCAGC+TGG | 0.478277 | 1.1:+71504919 | MS.gene066243:CDS |
| CTTGTTGCAACTTCCCATGC+TGG | 0.478479 | 1.1:+71504286 | MS.gene066243:CDS |
| CATGGAAGAAAAGTGTATCT+TGG | 0.485127 | 1.1:+71504748 | MS.gene066243:CDS |
| AGTATGGAGGAGTGATGCTT+TGG | 0.487463 | 1.1:+71505049 | MS.gene066243:CDS |
| GACCTGCGAGATTCATTTCA+GGG | 0.492299 | 1.1:-71504429 | None:intergenic |
| GATTGCTATGCCACCAGCAT+GGG | 0.506152 | 1.1:-71504299 | None:intergenic |
| CCGGCCGCCGCTGTAGATGC+CGG | 0.519785 | 1.1:-71504961 | None:intergenic |
| TCTGAAGTCAACACATCTGC+CGG | 0.536946 | 1.1:-71504997 | None:intergenic |
| TTATCTGGAATTGGACATTG+AGG | 0.543911 | 1.1:-71504778 | None:intergenic |
| GGTTTCATGATTTGCAGACT+GGG | 0.544792 | 1.1:+71505076 | MS.gene066243:CDS |
| GAGGAGTGATGCTTTGGTCA+AGG | 0.544888 | 1.1:+71505055 | MS.gene066243:CDS |
| CTTAAAGGGTATAGTAGACA+TGG | 0.545260 | 1.1:+71504730 | MS.gene066243:CDS |
| TTATGGAACACTTTCTTGGG+TGG | 0.560429 | 1.1:+71504607 | MS.gene066243:CDS |
| ACCCCTGAAATGAATCTCGC+AGG | 0.567411 | 1.1:+71504427 | MS.gene066243:CDS |
| TTCCTAAACAAATTCGGTAA+CGG | 0.579160 | 1.1:+71504400 | MS.gene066243:CDS |
| AGGGCTGCCGGCATCTACAG+CGG | 0.585171 | 1.1:+71504954 | MS.gene066243:CDS |
| TGGGGCCAAAATGGCAACGA+AGG | 0.591522 | 1.1:+71504325 | MS.gene066243:CDS |
| AGATTGCTATGCCACCAGCA+TGG | 0.592121 | 1.1:-71504300 | None:intergenic |
| TTTCCATTATATTGACAAGG+TGG | 0.592596 | 1.1:-71504865 | None:intergenic |
| GTTGCAACTTCCCATGCTGG+TGG | 0.594762 | 1.1:+71504289 | MS.gene066243:CDS |
| GGACTAGCACTGTTCCAGCT+GGG | 0.601285 | 1.1:+71504920 | MS.gene066243:CDS |
| GCTGCCGGCATCTACAGCGG+CGG | 0.604171 | 1.1:+71504957 | MS.gene066243:CDS |
| TTAGGAAAGCTATGTTAACA+TGG | 0.604430 | 1.1:-71504384 | None:intergenic |
| ATTTATTCCATGAATTCACA+AGG | 0.612674 | 1.1:-71504897 | None:intergenic |
| ACCCTTTAAGAAAACCTGCA+AGG | 0.616480 | 1.1:-71504717 | None:intergenic |
| ACCTGCGAGATTCATTTCAG+GGG | 0.619333 | 1.1:-71504428 | None:intergenic |
| ATGTTTCCATTATATTGACA+AGG | 0.620396 | 1.1:-71504868 | None:intergenic |
| TGCATGAATTTGGAAGTGAT+GGG | 0.620811 | 1.1:-71504459 | None:intergenic |
| TAGGAAAGCTATGTTAACAT+GGG | 0.626283 | 1.1:-71504383 | None:intergenic |
| GGGAAGTTGCAACAAGAGTG+AGG | 0.646970 | 1.1:-71504279 | None:intergenic |
| GGTGGCATAGCAATCTATTG+GGG | 0.654630 | 1.1:+71504307 | MS.gene066243:CDS |
| ATAAGAGACAACAAAGTGTG+AGG | 0.661237 | 1.1:-71504247 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAGAAGTCAAAAAAGTA+TGG | + | chr1.1:71505033-71505052 | MS.gene066243:CDS | 20.0% |
| !!! | AAACTTTGATTCCTTTATTT+TGG | - | chr1.1:71504513-71504532 | None:intergenic | 20.0% |
| !!! | ATAGATTTTGATATTGAACT+TGG | + | chr1.1:71504673-71504692 | MS.gene066243:CDS | 20.0% |
| !!! | ATCAAAGTTTTACTTTCAAT+TGG | + | chr1.1:71504523-71504542 | MS.gene066243:CDS | 20.0% |
| !!! | GAAACGTTTCAAAATTTTTA+TGG | + | chr1.1:71504590-71504609 | MS.gene066243:CDS | 20.0% |
| ! | ATAGCTTTCCTAAACAAATT+CGG | + | chr1.1:71504394-71504413 | MS.gene066243:CDS | 25.0% |
| ! | ATCAAAGATTGCCAAAATAA+AGG | + | chr1.1:71504499-71504518 | MS.gene066243:CDS | 25.0% |
| ! | ATGTTTCCATTATATTGACA+AGG | - | chr1.1:71504871-71504890 | None:intergenic | 25.0% |
| ! | ATTTATTCCATGAATTCACA+AGG | - | chr1.1:71504900-71504919 | None:intergenic | 25.0% |
| ! | TTGTGAATTCATGGAATAAA+TGG | + | chr1.1:71504899-71504918 | MS.gene066243:CDS | 25.0% |
| !! | AAAGTTTTACTTTCAATTGG+TGG | + | chr1.1:71504526-71504545 | MS.gene066243:CDS | 25.0% |
| !! | ATTTTTATGGAACACTTTCT+TGG | + | chr1.1:71504603-71504622 | MS.gene066243:CDS | 25.0% |
| !! | CCAATTCCAGATAAATTTTT+GGG | + | chr1.1:71504787-71504806 | MS.gene066243:CDS | 25.0% |
| !! | TCCAATTCCAGATAAATTTT+TGG | + | chr1.1:71504786-71504805 | MS.gene066243:CDS | 25.0% |
| !! | TTTTTATGGAACACTTTCTT+GGG | + | chr1.1:71504604-71504623 | MS.gene066243:CDS | 25.0% |
| !!! | TTTTTTGACTTCTTAATCAC+AGG | - | chr1.1:71505030-71505049 | None:intergenic | 25.0% |
| AATCCACCTTGTCAATATAA+TGG | + | chr1.1:71504862-71504881 | MS.gene066243:CDS | 30.0% | |
| CTACTCTTTATCTTCAATTG+AGG | + | chr1.1:71504561-71504580 | MS.gene066243:CDS | 30.0% | |
| TAACTAACCTTGTGAATTCA+TGG | + | chr1.1:71504890-71504909 | MS.gene066243:CDS | 30.0% | |
| TAGGAAAGCTATGTTAACAT+GGG | - | chr1.1:71504386-71504405 | None:intergenic | 30.0% | |
| TTAGGAAAGCTATGTTAACA+TGG | - | chr1.1:71504387-71504406 | None:intergenic | 30.0% | |
| TTCCTAAACAAATTCGGTAA+CGG | + | chr1.1:71504400-71504419 | MS.gene066243:CDS | 30.0% | |
| TTTCCATTATATTGACAAGG+TGG | - | chr1.1:71504868-71504887 | None:intergenic | 30.0% | |
| ! | AAGAAGTCAAAAAAGTATGG+AGG | + | chr1.1:71505036-71505055 | MS.gene066243:CDS | 30.0% |
| ! | CCCAAAAATTTATCTGGAAT+TGG | - | chr1.1:71504790-71504809 | None:intergenic | 30.0% |
| ! | CTGAATTTTGTGCATGAATT+TGG | - | chr1.1:71504472-71504491 | None:intergenic | 30.0% |
| !!! | AGGTCTTTTTGACTTTGTTT+GGG | + | chr1.1:71504825-71504844 | MS.gene066243:CDS | 30.0% |
| AAGTCATCTTCAAGACCATT+AGG | + | chr1.1:71504631-71504650 | MS.gene066243:CDS | 35.0% | |
| ATAAGAGACAACAAAGTGTG+AGG | - | chr1.1:71504250-71504269 | None:intergenic | 35.0% | |
| GGGTATAGCACTTCTATTAT+TGG | + | chr1.1:71505096-71505115 | MS.gene066243:CDS | 35.0% | |
| TGCATGAATTTGGAAGTGAT+GGG | - | chr1.1:71504462-71504481 | None:intergenic | 35.0% | |
| ! | ACCTTGCAGGTTTTCTTAAA+GGG | + | chr1.1:71504716-71504735 | MS.gene066243:CDS | 35.0% |
| ! | CATGGAAGAAAAGTGTATCT+TGG | + | chr1.1:71504748-71504767 | MS.gene066243:CDS | 35.0% |
| ! | CTTAAAGGGTATAGTAGACA+TGG | + | chr1.1:71504730-71504749 | MS.gene066243:CDS | 35.0% |
| ! | GTTTTACTTTCAATTGGTGG+TGG | + | chr1.1:71504529-71504548 | MS.gene066243:CDS | 35.0% |
| ! | TCTAAAACAGCATCACCTAA+TGG | - | chr1.1:71504649-71504668 | None:intergenic | 35.0% |
| ! | TTATCTGGAATTGGACATTG+AGG | - | chr1.1:71504781-71504800 | None:intergenic | 35.0% |
| !! | CAGCTGGGAAGATATTTTTA+GGG | + | chr1.1:71504935-71504954 | MS.gene066243:CDS | 35.0% |
| !!! | CAGGTCTTTTTGACTTTGTT+TGG | + | chr1.1:71504824-71504843 | MS.gene066243:CDS | 35.0% |
| !!! | GTTAACATGGGAGTATTTTC+CGG | - | chr1.1:71504374-71504393 | None:intergenic | 35.0% |
| !!! | TTAGGTGATGCTGTTTTAGA+TGG | + | chr1.1:71504649-71504668 | MS.gene066243:CDS | 35.0% |
| AACTTGGTTCCACCGAAAAT+TGG | + | chr1.1:71504689-71504708 | MS.gene066243:CDS | 40.0% | |
| CCTAAAAATATCTTCCCAGC+TGG | - | chr1.1:71504937-71504956 | None:intergenic | 40.0% | |
| GCAGTGCCCAAAAATTTATC+TGG | - | chr1.1:71504796-71504815 | None:intergenic | 40.0% | |
| GTGCATGAATTTGGAAGTGA+TGG | - | chr1.1:71504463-71504482 | None:intergenic | 40.0% | |
| TGGTGGCATAGCAATCTATT+GGG | + | chr1.1:71504306-71504325 | MS.gene066243:CDS | 40.0% | |
| TTATGGAACACTTTCTTGGG+TGG | + | chr1.1:71504607-71504626 | MS.gene066243:CDS | 40.0% | |
| ! | ACCCTTTAAGAAAACCTGCA+AGG | - | chr1.1:71504720-71504739 | None:intergenic | 40.0% |
| ! | AGGTTTCATGATTTGCAGAC+TGG | + | chr1.1:71505075-71505094 | MS.gene066243:CDS | 40.0% |
| ! | CACCTTGCAGGTTTTCTTAA+AGG | + | chr1.1:71504715-71504734 | MS.gene066243:CDS | 40.0% |
| ! | CCAGCTGGGAAGATATTTTT+AGG | + | chr1.1:71504934-71504953 | MS.gene066243:CDS | 40.0% |
| ! | GACCGTTACCGAATTTGTTT+AGG | - | chr1.1:71504405-71504424 | None:intergenic | 40.0% |
| ! | GGTTTCATGATTTGCAGACT+GGG | + | chr1.1:71505076-71505095 | MS.gene066243:CDS | 40.0% |
| !! | CTTTCAATTGGTGGTGGAAT+TGG | + | chr1.1:71504535-71504554 | MS.gene066243:CDS | 40.0% |
| !!! | GAAGATATTTTTAGGGCTGC+CGG | + | chr1.1:71504942-71504961 | MS.gene066243:CDS | 40.0% |
| !!! | TGCAAGGTGTTGCCAATTTT+CGG | - | chr1.1:71504704-71504723 | None:intergenic | 40.0% |
| ACCTGCGAGATTCATTTCAG+GGG | - | chr1.1:71504431-71504450 | None:intergenic | 45.0% | |
| AGTATGGAGGAGTGATGCTT+TGG | + | chr1.1:71505049-71505068 | MS.gene066243:CDS | 45.0% | |
| CTGGTGGCATAGCAATCTAT+TGG | + | chr1.1:71504305-71504324 | MS.gene066243:CDS | 45.0% | |
| GAAAATTGGCAACACCTTGC+AGG | + | chr1.1:71504703-71504722 | MS.gene066243:CDS | 45.0% | |
| GACCTGCGAGATTCATTTCA+GGG | - | chr1.1:71504432-71504451 | None:intergenic | 45.0% | |
| GCAATCTATTGGGGCCAAAA+TGG | + | chr1.1:71504316-71504335 | MS.gene066243:CDS | 45.0% | |
| GGTGGCATAGCAATCTATTG+GGG | + | chr1.1:71504307-71504326 | MS.gene066243:CDS | 45.0% | |
| TGACCTGCGAGATTCATTTC+AGG | - | chr1.1:71504433-71504452 | None:intergenic | 45.0% | |
| TGCCGGAATAAAACCACTTC+CGG | - | chr1.1:71504983-71505002 | None:intergenic | 45.0% | |
| ! | TCTGAAGTCAACACATCTGC+CGG | - | chr1.1:71505000-71505019 | None:intergenic | 45.0% |
| !! | AGGTTCCTTCGTTGCCATTT+TGG | - | chr1.1:71504333-71504352 | None:intergenic | 45.0% |
| !!! | AAGGTGTTGCCAATTTTCGG+TGG | - | chr1.1:71504701-71504720 | None:intergenic | 45.0% |
| ACCCCTGAAATGAATCTCGC+AGG | + | chr1.1:71504427-71504446 | MS.gene066243:CDS | 50.0% | |
| AGATTGCTATGCCACCAGCA+TGG | - | chr1.1:71504303-71504322 | None:intergenic | 50.0% | |
| CTTGTTGCAACTTCCCATGC+TGG | + | chr1.1:71504286-71504305 | MS.gene066243:CDS | 50.0% | |
| GAGGAGTGATGCTTTGGTCA+AGG | + | chr1.1:71505055-71505074 | MS.gene066243:CDS | 50.0% | |
| GATTGCTATGCCACCAGCAT+GGG | - | chr1.1:71504302-71504321 | None:intergenic | 50.0% | |
| GGGAAGTTGCAACAAGAGTG+AGG | - | chr1.1:71504282-71504301 | None:intergenic | 50.0% | |
| TTATCCGAAGCATGCGCAAC+CGG | + | chr1.1:71504352-71504371 | MS.gene066243:CDS | 50.0% | |
| ! | TTGGGCACTGCACTTGAAAC+AGG | + | chr1.1:71504805-71504824 | MS.gene066243:CDS | 50.0% |
| ! | TTTTCCGGTTGCGCATGCTT+CGG | - | chr1.1:71504359-71504378 | None:intergenic | 50.0% |
| !!! | GGCCGGAAGTGGTTTTATTC+CGG | + | chr1.1:71504978-71504997 | MS.gene066243:CDS | 50.0% |
| GGTTGCGCATGCTTCGGATA+AGG | - | chr1.1:71504353-71504372 | None:intergenic | 55.0% | |
| GTTGCAACTTCCCATGCTGG+TGG | + | chr1.1:71504289-71504308 | MS.gene066243:CDS | 55.0% | |
| TGGGGCCAAAATGGCAACGA+AGG | + | chr1.1:71504325-71504344 | MS.gene066243:CDS | 55.0% | |
| ! | GGACTAGCACTGTTCCAGCT+GGG | + | chr1.1:71504920-71504939 | MS.gene066243:CDS | 55.0% |
| !! | TGGACTAGCACTGTTCCAGC+TGG | + | chr1.1:71504919-71504938 | MS.gene066243:CDS | 55.0% |
| AGGGCTGCCGGCATCTACAG+CGG | + | chr1.1:71504954-71504973 | MS.gene066243:CDS | 65.0% | |
| GCTGCCGGCATCTACAGCGG+CGG | + | chr1.1:71504957-71504976 | MS.gene066243:CDS | 70.0% | |
| TCTACAGCGGCGGCCGGAAG+TGG | + | chr1.1:71504967-71504986 | MS.gene066243:CDS | 70.0% | |
| CCGGCATCTACAGCGGCGGC+CGG | + | chr1.1:71504961-71504980 | MS.gene066243:CDS | 75.0% | |
| CCGGCCGCCGCTGTAGATGC+CGG | - | chr1.1:71504964-71504983 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 71504235 | 71505128 | 71504235 | ID=MS.gene066243 |
| chr1.1 | mRNA | 71504235 | 71505128 | 71504235 | ID=MS.gene066243.t1;Parent=MS.gene066243 |
| chr1.1 | exon | 71504235 | 71505128 | 71504235 | ID=MS.gene066243.t1.exon1;Parent=MS.gene066243.t1 |
| chr1.1 | CDS | 71504235 | 71505128 | 71504235 | ID=cds.MS.gene066243.t1;Parent=MS.gene066243.t1 |
| Gene Sequence |
| Protein sequence |
