Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066755.t1 | XP_004490227.1 | 61.2 | 85 | 30 | 3 | 12 | 95 | 638 | 720 | 1.40E-12 | 82.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066755.t1 | Q8GYU3 | 48.3 | 58 | 28 | 1 | 15 | 70 | 588 | 645 | 6.3e-06 | 51.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066755.t1 | A0A1S2XKY2 | 61.2 | 85 | 30 | 3 | 12 | 95 | 638 | 720 | 1.0e-12 | 82.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049159 | MS.gene066755 | 0.805733 | 1.16E-49 | -1.69E-46 |
MS.gene049821 | MS.gene066755 | 0.808866 | 2.51E-50 | -1.69E-46 |
MS.gene050807 | MS.gene066755 | 0.8155 | 8.96E-52 | -1.69E-46 |
MS.gene051243 | MS.gene066755 | 0.80497 | 1.67E-49 | -1.69E-46 |
MS.gene054657 | MS.gene066755 | 0.804909 | 1.72E-49 | -1.69E-46 |
MS.gene057444 | MS.gene066755 | 0.80018 | 1.63E-48 | -1.69E-46 |
MS.gene057869 | MS.gene066755 | 0.814122 | 1.81E-51 | -1.69E-46 |
MS.gene060803 | MS.gene066755 | 0.804111 | 2.53E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066755.t1 | MTR_2g060610 | 66.667 | 72 | 11 | 2 | 12 | 70 | 46 | 117 | 4.04e-22 | 84.0 |
MS.gene066755.t1 | MTR_5g046240 | 75.000 | 60 | 14 | 1 | 12 | 70 | 546 | 605 | 3.84e-21 | 87.0 |
MS.gene066755.t1 | MTR_2g060600 | 70.833 | 48 | 11 | 1 | 61 | 105 | 27 | 74 | 1.81e-15 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 25 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGATCTTTGGAACAAATTC+TGG | 0.176573 | 2.2:-28480179 | None:intergenic |
ACAATTGTACAGAGATTTAT+TGG | 0.191689 | 2.2:+28479444 | MS.gene066755:CDS |
ACTTGAGTTGATCAAAATAT+TGG | 0.275160 | 2.2:+28480202 | MS.gene066755:CDS |
ATCAACTCAAGTCCGATCTT+TGG | 0.291108 | 2.2:-28480191 | None:intergenic |
TCTTGAAAGGGTGACATTAC+AGG | 0.292157 | 2.2:+28480130 | MS.gene066755:CDS |
TTGATCAAAATATTGGCATT+TGG | 0.301587 | 2.2:+28480209 | MS.gene066755:CDS |
TGATCAAAATATTGGCATTT+GGG | 0.327176 | 2.2:+28480210 | MS.gene066755:CDS |
GTTGGAGCGGAAAACTTGTT+TGG | 0.369327 | 2.2:+28479629 | MS.gene066755:CDS |
AAAATCTGTAAAACTCTTGA+AGG | 0.378482 | 2.2:+28479494 | MS.gene066755:CDS |
TGTTTGGAGTTTATAAAGAA+TGG | 0.398840 | 2.2:+28479645 | MS.gene066755:CDS |
CCAGAATTTGTTCCAAAGAT+CGG | 0.439021 | 2.2:+28480179 | MS.gene066755:CDS |
CAATTGTACAGAGATTTATT+GGG | 0.454992 | 2.2:+28479445 | MS.gene066755:CDS |
GGTTAAGGTCTTGGCTCAGT+TGG | 0.473212 | 2.2:+28479611 | MS.gene066755:intron |
GTTTGGAGTTTATAAAGAAT+GGG | 0.474872 | 2.2:+28479646 | MS.gene066755:CDS |
TGCTTTCAGAGTTCTTGAAA+GGG | 0.508227 | 2.2:+28480118 | MS.gene066755:intron |
ATGCTTTCAGAGTTCTTGAA+AGG | 0.511397 | 2.2:+28480117 | MS.gene066755:intron |
AATCCGTGGCACAGGTCCAT+TGG | 0.518651 | 2.2:-28480156 | None:intergenic |
AATTCTGGAATCCGTGGCAC+AGG | 0.526371 | 2.2:-28480164 | None:intergenic |
TTAACGATAGTAGCCGCTCC+AGG | 0.582692 | 2.2:+28478388 | MS.gene066755:CDS |
AGGTCTTGGCTCAGTTGGAG+CGG | 0.602503 | 2.2:+28479616 | MS.gene066755:intron |
CGCCAAGATCTCACCTGGAG+CGG | 0.609539 | 2.2:-28478401 | None:intergenic |
AAGCCAATGGACCTGTGCCA+CGG | 0.617584 | 2.2:+28480153 | MS.gene066755:CDS |
GGAACAAATTCTGGAATCCG+TGG | 0.622732 | 2.2:-28480170 | None:intergenic |
GTGACATTACAGGAAGCCAA+TGG | 0.643356 | 2.2:+28480140 | MS.gene066755:CDS |
CGCTACAATGAGGATAATAG+CGG | 0.698906 | 2.2:+28478360 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAATATTTTAACAGAAAA+AGG | - | chr2.2:28479548-28479567 | None:intergenic | 10.0% |
!! | AACATATAATATGAACTTAA+GGG | - | chr2.2:28478952-28478971 | None:intergenic | 15.0% |
!! | TAAAAATTAAACTGTTTCAA+GGG | + | chr2.2:28478489-28478508 | MS.gene066755:intron | 15.0% |
!! | TATAAAAAAATCTTAAAGTG+AGG | - | chr2.2:28478807-28478826 | None:intergenic | 15.0% |
!!! | TTGAAACAGTTTAATTTTTA+GGG | - | chr2.2:28478489-28478508 | None:intergenic | 15.0% |
!! | CTAAAAATTAAACTGTTTCA+AGG | + | chr2.2:28478488-28478507 | MS.gene066755:intron | 20.0% |
!! | GAACATATAATATGAACTTA+AGG | - | chr2.2:28478953-28478972 | None:intergenic | 20.0% |
!!! | AATGTTTTTCTCGTAAAATT+TGG | - | chr2.2:28479222-28479241 | None:intergenic | 20.0% |
!!! | ACATGTATCTAAAATTGTTA+GGG | + | chr2.2:28480043-28480062 | MS.gene066755:intron | 20.0% |
!!! | ACTAATGTTTGATATGATTT+TGG | + | chr2.2:28479590-28479609 | MS.gene066755:intron | 20.0% |
!!! | ATGTTTTTCTCGTAAAATTT+GGG | - | chr2.2:28479221-28479240 | None:intergenic | 20.0% |
!!! | CTTGAAACAGTTTAATTTTT+AGG | - | chr2.2:28478490-28478509 | None:intergenic | 20.0% |
!!! | TTATGCATTGTATTTTTGTA+TGG | + | chr2.2:28478837-28478856 | MS.gene066755:intron | 20.0% |
!!! | TTGATATAAATTTCAAGTCA+TGG | - | chr2.2:28479682-28479701 | None:intergenic | 20.0% |
! | AAAATCTGTAAAACTCTTGA+AGG | + | chr2.2:28479494-28479513 | MS.gene066755:CDS | 25.0% |
! | AAATTCTGAACAATGCATAT+AGG | - | chr2.2:28478919-28478938 | None:intergenic | 25.0% |
! | ACAATTGTACAGAGATTTAT+TGG | + | chr2.2:28479444-28479463 | MS.gene066755:CDS | 25.0% |
! | CAATTGTACAGAGATTTATT+GGG | + | chr2.2:28479445-28479464 | MS.gene066755:CDS | 25.0% |
! | TACAGAGATAACTCATATTA+GGG | - | chr2.2:28478707-28478726 | None:intergenic | 25.0% |
! | TCCACATTAAAACAATATAG+TGG | - | chr2.2:28478460-28478479 | None:intergenic | 25.0% |
! | TGATCAAAATATTGGCATTT+GGG | + | chr2.2:28480210-28480229 | MS.gene066755:CDS | 25.0% |
! | TTACAGAGATAACTCATATT+AGG | - | chr2.2:28478708-28478727 | None:intergenic | 25.0% |
! | TTGATCAAAATATTGGCATT+TGG | + | chr2.2:28480209-28480228 | MS.gene066755:CDS | 25.0% |
!! | ATGCATTGTTCAGAATTTTA+TGG | + | chr2.2:28478921-28478940 | MS.gene066755:intron | 25.0% |
!! | ATGTATCTAAAATTGTTAGG+GGG | + | chr2.2:28480045-28480064 | MS.gene066755:intron | 25.0% |
!! | CACATGTATCTAAAATTGTT+AGG | + | chr2.2:28480042-28480061 | MS.gene066755:intron | 25.0% |
!! | CATGTATCTAAAATTGTTAG+GGG | + | chr2.2:28480044-28480063 | MS.gene066755:intron | 25.0% |
!! | CTAACAATTTTAGATACATG+TGG | - | chr2.2:28480044-28480063 | None:intergenic | 25.0% |
!! | GAGTTTTACAGATTTTATTC+TGG | - | chr2.2:28479490-28479509 | None:intergenic | 25.0% |
!! | GTTTGGAGTTTATAAAGAAT+GGG | + | chr2.2:28479646-28479665 | MS.gene066755:CDS | 25.0% |
!! | TGTTTGGAGTTTATAAAGAA+TGG | + | chr2.2:28479645-28479664 | MS.gene066755:CDS | 25.0% |
!!! | ACCACTATATTGTTTTAATG+TGG | + | chr2.2:28478456-28478475 | MS.gene066755:intron | 25.0% |
!!! | ACTTGAGTTGATCAAAATAT+TGG | + | chr2.2:28480202-28480221 | MS.gene066755:CDS | 25.0% |
!!! | GTTTGATATGATTTTGGTTA+AGG | + | chr2.2:28479596-28479615 | MS.gene066755:intron | 25.0% |
!!! | TATTGTAACTCTTTTTTCGT+TGG | + | chr2.2:28480074-28480093 | MS.gene066755:intron | 25.0% |
!!! | TCGATAAGTTTTTCAAATGA+AGG | - | chr2.2:28479874-28479893 | None:intergenic | 25.0% |
ACTCATATTAGGGAAAAGAA+AGG | - | chr2.2:28478697-28478716 | None:intergenic | 30.0% | |
CTAAACCTCTGCAATTAATT+TGG | - | chr2.2:28479961-28479980 | None:intergenic | 30.0% | |
GAAGGAAAAAAAGTAAACTC+GGG | + | chr2.2:28479737-28479756 | MS.gene066755:intron | 30.0% | |
GCAAATGAATGAATTTGGAA+TGG | - | chr2.2:28478560-28478579 | None:intergenic | 30.0% | |
GGAAGGAAAAAAAGTAAACT+CGG | + | chr2.2:28479736-28479755 | MS.gene066755:intron | 30.0% | |
TATTCTCTAATGATTGCAGA+TGG | + | chr2.2:28479325-28479344 | MS.gene066755:intron | 30.0% | |
!! | TCTGCTATTTGATCATGTTT+TGG | - | chr2.2:28479100-28479119 | None:intergenic | 30.0% |
!!! | TATGATTTTGGTTAAGGTCT+TGG | + | chr2.2:28479602-28479621 | MS.gene066755:intron | 30.0% |
AAACTGTTTCAAGGGCAATT+TGG | + | chr2.2:28478497-28478516 | MS.gene066755:intron | 35.0% | |
AACTGTTTCAAGGGCAATTT+GGG | + | chr2.2:28478498-28478517 | MS.gene066755:intron | 35.0% | |
AAGATCCAACCAAAAAGAGA+AGG | - | chr2.2:28479851-28479870 | None:intergenic | 35.0% | |
AGGATTGACTACCTAGATTT+GGG | + | chr2.2:28479149-28479168 | MS.gene066755:intron | 35.0% | |
ATATCAACTTCCTTTGTCCA+TGG | + | chr2.2:28479695-28479714 | MS.gene066755:intron | 35.0% | |
ATGAATCTACTTGCATCTCT+AGG | + | chr2.2:28479908-28479927 | MS.gene066755:intron | 35.0% | |
ATGCTTTCAGAGTTCTTGAA+AGG | + | chr2.2:28480117-28480136 | MS.gene066755:intron | 35.0% | |
ATTGAAAGAACATGACTGCA+TGG | - | chr2.2:28478660-28478679 | None:intergenic | 35.0% | |
CTATTGAACAATTGCGATTC+TGG | + | chr2.2:28479770-28479789 | MS.gene066755:intron | 35.0% | |
GACTTCCAAATTAATTGCAG+AGG | + | chr2.2:28479953-28479972 | MS.gene066755:intron | 35.0% | |
TAATTGCAGAGGTTTAGTCT+TGG | + | chr2.2:28479964-28479983 | MS.gene066755:intron | 35.0% | |
TAGGATTGACTACCTAGATT+TGG | + | chr2.2:28479148-28479167 | MS.gene066755:intron | 35.0% | |
TGAATCTACTTGCATCTCTA+GGG | + | chr2.2:28479909-28479928 | MS.gene066755:intron | 35.0% | |
TGCTTTCAGAGTTCTTGAAA+GGG | + | chr2.2:28480118-28480137 | MS.gene066755:intron | 35.0% | |
! | CCAGAATTTGTTCCAAAGAT+CGG | + | chr2.2:28480179-28480198 | MS.gene066755:CDS | 35.0% |
! | TATTCCATGCCTTCTCTTTT+TGG | + | chr2.2:28479839-28479858 | MS.gene066755:intron | 35.0% |
!! | GTTTAGTCTTGGAGTTATGT+TGG | + | chr2.2:28479975-28479994 | MS.gene066755:intron | 35.0% |
AACCCCAAAAGCTATCTCAA+GGG | + | chr2.2:28479185-28479204 | MS.gene066755:intron | 40.0% | |
ACGGCGCAAATGAATGAATT+TGG | - | chr2.2:28478565-28478584 | None:intergenic | 40.0% | |
AGGTAGTCAATCCTAGATAG+CGG | - | chr2.2:28479143-28479162 | None:intergenic | 40.0% | |
ATCAACTCAAGTCCGATCTT+TGG | - | chr2.2:28480194-28480213 | None:intergenic | 40.0% | |
ATGGACAACTGGCTAAAGTT+AGG | + | chr2.2:28479714-28479733 | MS.gene066755:intron | 40.0% | |
TAACTTTAGCCAGTTGTCCA+TGG | - | chr2.2:28479715-28479734 | None:intergenic | 40.0% | |
TCTTGAAAGGGTGACATTAC+AGG | + | chr2.2:28480130-28480149 | MS.gene066755:CDS | 40.0% | |
TGAACAATTGCGATTCTGGA+GGG | + | chr2.2:28479774-28479793 | MS.gene066755:intron | 40.0% | |
TGGACAACTGGCTAAAGTTA+GGG | + | chr2.2:28479715-28479734 | MS.gene066755:intron | 40.0% | |
TGGAGGGTTTGCATTTGATA+TGG | + | chr2.2:28479790-28479809 | MS.gene066755:intron | 40.0% | |
TTAGGGCTCACAAACTTGAA+CGG | - | chr2.2:28478584-28478603 | None:intergenic | 40.0% | |
TTGAACAATTGCGATTCTGG+AGG | + | chr2.2:28479773-28479792 | MS.gene066755:intron | 40.0% | |
! | AGAGAAGGCATGGAATATCT+CGG | - | chr2.2:28479836-28479855 | None:intergenic | 40.0% |
! | ATTGGCATTTGGGCTTTTCA+GGG | + | chr2.2:28480220-28480239 | MS.gene066755:CDS | 40.0% |
! | CGATGGTTGACTTAAGAAAG+TGG | + | chr2.2:28480000-28480019 | MS.gene066755:intron | 40.0% |
! | CTACACTGATTGTCATAGCA+AGG | + | chr2.2:28479381-28479400 | MS.gene066755:intron | 40.0% |
! | GAGGAAGAAGAAAAGCATGA+TGG | - | chr2.2:28478788-28478807 | None:intergenic | 40.0% |
! | TATTGGCATTTGGGCTTTTC+AGG | + | chr2.2:28480219-28480238 | MS.gene066755:CDS | 40.0% |
!! | AAGTGGATTGCAACAAGAAG+TGG | + | chr2.2:28480017-28480036 | MS.gene066755:intron | 40.0% |
!! | CCGATCTTTGGAACAAATTC+TGG | - | chr2.2:28480182-28480201 | None:intergenic | 40.0% |
ACAGAGCGATGAAAACGGTT+AGG | - | chr2.2:28478602-28478621 | None:intergenic | 45.0% | |
ACCCCAAAAGCTATCTCAAG+GGG | + | chr2.2:28479186-28479205 | MS.gene066755:intron | 45.0% | |
ACGGAACAGAGCGATGAAAA+CGG | - | chr2.2:28478607-28478626 | None:intergenic | 45.0% | |
ATAAGCTATCCCCGCTATCT+AGG | + | chr2.2:28479129-28479148 | MS.gene066755:intron | 45.0% | |
CAACCCCAAAAGCTATCTCA+AGG | + | chr2.2:28479184-28479203 | MS.gene066755:intron | 45.0% | |
CAACTGGCTAAAGTTAGGGA+AGG | + | chr2.2:28479719-28479738 | MS.gene066755:intron | 45.0% | |
CAGAGCGATGAAAACGGTTA+GGG | - | chr2.2:28478601-28478620 | None:intergenic | 45.0% | |
CCAACCAAAAAGAGAAGGCA+TGG | - | chr2.2:28479846-28479865 | None:intergenic | 45.0% | |
CGATGGGTGCAAAACTTGAA+CGG | - | chr2.2:28478626-28478645 | None:intergenic | 45.0% | |
CTCAAACCTAGCCCAAATCT+AGG | - | chr2.2:28479163-28479182 | None:intergenic | 45.0% | |
GAAAGAACATGACTGCATGG+TGG | - | chr2.2:28478657-28478676 | None:intergenic | 45.0% | |
GGTAGTCAATCCTAGATAGC+GGG | - | chr2.2:28479142-28479161 | None:intergenic | 45.0% | |
GTAGTCAATCCTAGATAGCG+GGG | - | chr2.2:28479141-28479160 | None:intergenic | 45.0% | |
GTGACATTACAGGAAGCCAA+TGG | + | chr2.2:28480140-28480159 | MS.gene066755:CDS | 45.0% | |
TGACTACCTAGATTTGGGCT+AGG | + | chr2.2:28479154-28479173 | MS.gene066755:intron | 45.0% | |
TTCCTTTGTCCATGGACAAC+TGG | + | chr2.2:28479703-28479722 | MS.gene066755:intron | 45.0% | |
TTGGAGTTATGTTGGTGCGA+TGG | + | chr2.2:28479983-28480002 | MS.gene066755:intron | 45.0% | |
! | ATAGCGGGGATAGCTTATAG+CGG | - | chr2.2:28479127-28479146 | None:intergenic | 45.0% |
! | ATCTACTTGCATCTCTAGGG+AGG | + | chr2.2:28479912-28479931 | MS.gene066755:intron | 45.0% |
! | GTTGGAGCGGAAAACTTGTT+TGG | + | chr2.2:28479629-28479648 | MS.gene066755:CDS | 45.0% |
! | TAGGGAGGCATATCTTGTTC+TGG | + | chr2.2:28479927-28479946 | MS.gene066755:intron | 45.0% |
!! | CCATGCCTTCTCTTTTTGGT+TGG | + | chr2.2:28479843-28479862 | MS.gene066755:intron | 45.0% |
!! | GGAACAAATTCTGGAATCCG+TGG | - | chr2.2:28480173-28480192 | None:intergenic | 45.0% |
AAAAGCTATCTCAAGGGGGG+AGG | + | chr2.2:28479191-28479210 | MS.gene066755:intron | 50.0% | |
AGACTCTTCCAAAGCTGCTG+TGG | - | chr2.2:28479354-28479373 | None:intergenic | 50.0% | |
AGCCAGTTGTCCATGGACAA+AGG | - | chr2.2:28479708-28479727 | None:intergenic | 50.0% | |
ATGACTGCATGGTGGCTGTA+CGG | - | chr2.2:28478649-28478668 | None:intergenic | 50.0% | |
CCCAAAAGCTATCTCAAGGG+GGG | + | chr2.2:28479188-28479207 | MS.gene066755:intron | 50.0% | |
CCCCAAAAGCTATCTCAAGG+GGG | + | chr2.2:28479187-28479206 | MS.gene066755:intron | 50.0% | |
GGTTAAGGTCTTGGCTCAGT+TGG | + | chr2.2:28479611-28479630 | MS.gene066755:intron | 50.0% | |
TAGCGGGGATAGCTTATAGC+GGG | - | chr2.2:28479126-28479145 | None:intergenic | 50.0% | |
TTAACGATAGTAGCCGCTCC+AGG | + | chr2.2:28478388-28478407 | MS.gene066755:CDS | 50.0% | |
! | CCCCCCTTGAGATAGCTTTT+GGG | - | chr2.2:28479191-28479210 | None:intergenic | 50.0% |
! | CCCCCTTGAGATAGCTTTTG+GGG | - | chr2.2:28479190-28479209 | None:intergenic | 50.0% |
! | GATGGATTCCACAGCAGCTT+TGG | + | chr2.2:28479343-28479362 | MS.gene066755:intron | 50.0% |
! | TCCCCCCTTGAGATAGCTTT+TGG | - | chr2.2:28479192-28479211 | None:intergenic | 50.0% |
!! | AATTCTGGAATCCGTGGCAC+AGG | - | chr2.2:28480167-28480186 | None:intergenic | 50.0% |
AAGCCAATGGACCTGTGCCA+CGG | + | chr2.2:28480153-28480172 | MS.gene066755:CDS | 55.0% | |
AATCCGTGGCACAGGTCCAT+TGG | - | chr2.2:28480159-28480178 | None:intergenic | 55.0% | |
AGGTCTTGGCTCAGTTGGAG+CGG | + | chr2.2:28479616-28479635 | MS.gene066755:intron | 55.0% | |
AGCCGCTCCAGGTGAGATCT+TGG | + | chr2.2:28478399-28478418 | MS.gene066755:intron | 60.0% | |
AGGTGAGATCTTGGCGGAGC+GGG | + | chr2.2:28478408-28478427 | MS.gene066755:intron | 60.0% | |
CAGGTGAGATCTTGGCGGAG+CGG | + | chr2.2:28478407-28478426 | MS.gene066755:intron | 60.0% | |
CATGGTGGCTGTACGGCGAT+GGG | - | chr2.2:28478642-28478661 | None:intergenic | 60.0% | |
CGCCAAGATCTCACCTGGAG+CGG | - | chr2.2:28478404-28478423 | None:intergenic | 60.0% | |
CGCTCCAGGTGAGATCTTGG+CGG | + | chr2.2:28478402-28478421 | MS.gene066755:intron | 60.0% | |
CGCTCCGCCAAGATCTCACC+TGG | - | chr2.2:28478409-28478428 | None:intergenic | 65.0% | |
GCATGGTGGCTGTACGGCGA+TGG | - | chr2.2:28478643-28478662 | None:intergenic | 65.0% | |
GGTGAGATCTTGGCGGAGCG+GGG | + | chr2.2:28478409-28478428 | MS.gene066755:intron | 65.0% | |
! | GCGGAGCGGGGTCGCAGAGC+AGG | + | chr2.2:28478421-28478440 | MS.gene066755:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 28478367 | 28480259 | 28478367 | ID=MS.gene066755 |
chr2.2 | mRNA | 28478367 | 28480259 | 28478367 | ID=MS.gene066755.t1;Parent=MS.gene066755 |
chr2.2 | exon | 28478367 | 28478409 | 28478367 | ID=MS.gene066755.t1.exon1;Parent=MS.gene066755.t1 |
chr2.2 | CDS | 28478367 | 28478409 | 28478367 | ID=cds.MS.gene066755.t1;Parent=MS.gene066755.t1 |
chr2.2 | exon | 28479418 | 28479515 | 28479418 | ID=MS.gene066755.t1.exon2;Parent=MS.gene066755.t1 |
chr2.2 | CDS | 28479418 | 28479515 | 28479418 | ID=cds.MS.gene066755.t1;Parent=MS.gene066755.t1 |
chr2.2 | exon | 28479618 | 28479667 | 28479618 | ID=MS.gene066755.t1.exon3;Parent=MS.gene066755.t1 |
chr2.2 | CDS | 28479618 | 28479667 | 28479618 | ID=cds.MS.gene066755.t1;Parent=MS.gene066755.t1 |
chr2.2 | exon | 28480127 | 28480259 | 28480127 | ID=MS.gene066755.t1.exon4;Parent=MS.gene066755.t1 |
chr2.2 | CDS | 28480127 | 28480259 | 28480127 | ID=cds.MS.gene066755.t1;Parent=MS.gene066755.t1 |
Gene Sequence |
Protein sequence |