AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054657


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054657.t1 MTR_5g044050 98.634 366 5 0 1 366 1 366 0.0 733
MS.gene054657.t1 MTR_8g071110 39.155 355 195 7 22 362 57 404 1.13e-71 229
MS.gene054657.t1 MTR_1g115505 36.412 379 191 8 24 366 83 447 1.31e-68 223
MS.gene054657.t1 MTR_5g021440 89.583 48 4 1 1 48 1 47 1.57e-21 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054657.t1 AT1G26520 72.853 361 92 2 4 361 13 370 0.0 541
MS.gene054657.t1 AT1G15730 38.275 371 186 7 24 362 86 445 6.35e-75 239
MS.gene054657.t1 AT1G80480 37.173 382 198 7 12 362 71 441 2.28e-73 234

Find 74 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCTTTGGCATCTATTCTT+TGG 0.207860 5.3:+31733022 MS.gene054657:CDS
TAAGCATGCTGCACATTTAG+AGG 0.274462 5.3:+31734180 MS.gene054657:intron
AATGAGTTTGGTGAGGAAAT+TGG 0.300166 5.3:+31732336 MS.gene054657:CDS
CTACGAGTGTGTTAATGTTA+TGG 0.302882 5.3:-31734002 None:intergenic
TGATGAATTGCATACTTTGC+AGG 0.313404 5.3:+31734659 MS.gene054657:CDS
TATGGCTAGAGGAGATTCTT+TGG 0.317773 5.3:+31734577 MS.gene054657:CDS
ATGAATAAGATAGTATTTAT+AGG 0.327529 5.3:+31737263 MS.gene054657:CDS
AATTCTTAACAAGGTTGATT+TGG 0.330079 5.3:+31733933 MS.gene054657:CDS
TTGGGAGAAGAAATATGATA+TGG 0.330619 5.3:+31734596 MS.gene054657:CDS
TTGCACTGTTAAACATAGTT+TGG 0.335183 5.3:+31732440 MS.gene054657:CDS
AACAGAAGATTGTTGAGAAA+TGG 0.344084 5.3:-31731534 None:intergenic
GAGCTTTCAAGCCATTGATT+AGG 0.361287 5.3:-31737389 None:intergenic
GCTGTGATATTGAATGAGTT+TGG 0.371555 5.3:+31732324 MS.gene054657:CDS
GCTATCTGAAAATATGCTTC+AGG 0.372809 5.3:-31733541 None:intergenic
AAACAAATACACAGCCTAAC+AGG 0.375928 5.3:-31737418 None:intergenic
TGTGGCTAATCCAGCACCTT+TGG 0.381484 5.3:+31733008 MS.gene054657:CDS
ACTCTCATCACTGGTTATCT+TGG 0.383465 5.3:+31731563 MS.gene054657:CDS
AATCATGGCAGACTCGTATA+TGG 0.391984 5.3:+31734559 MS.gene054657:intron
TTTGGCATCTATTCTTTGGT+TGG 0.414831 5.3:+31733026 MS.gene054657:CDS
TTCTCTGCACAAGCTGCTCA+AGG 0.418476 5.3:-31732470 None:intergenic
TAGGCTAGACCATATATTGC+TGG 0.419326 5.3:+31732975 MS.gene054657:intron
AGAATAGATGCCAAAGGTGC+TGG 0.420889 5.3:-31733018 None:intergenic
TTGGTATCTGCAGAAGGCTC+TGG 0.429405 5.3:+31733952 MS.gene054657:CDS
CAGTAGTTTCCAGCAATATA+TGG 0.431248 5.3:-31732984 None:intergenic
ATGGCTAGAGGAGATTCTTT+GGG 0.440901 5.3:+31734578 MS.gene054657:CDS
TCCTGTCTCGGAGATGCATA+TGG 0.443042 5.3:-31734263 None:intergenic
AGTGGAAGAAAGAAGAAAAC+AGG 0.446364 5.3:+31737240 MS.gene054657:CDS
ATCACTGGTTATCTTGGTGC+TGG 0.459836 5.3:+31731569 MS.gene054657:CDS
GAAAGAGCATTGATAAATGA+AGG 0.462576 5.3:+31732363 MS.gene054657:CDS
GAAAGCTCTTGCAACCTGTT+AGG 0.464002 5.3:+31737404 MS.gene054657:CDS
AAAGAAGATGTCCTAATCAA+TGG 0.473604 5.3:+31737378 MS.gene054657:CDS
TCTTTCTTCCACTTCCGAGC+AGG 0.475644 5.3:-31737230 None:intergenic
AGATCGTTCCTGCTCGGAAG+TGG 0.476913 5.3:+31737222 MS.gene054657:CDS
AGCCACGGTGCTCCTTGAGC+TGG 0.477134 5.3:-31733507 None:intergenic
TCTTTGGTTGGATGAACAGT+TGG 0.479469 5.3:+31733038 MS.gene054657:CDS
GTTGGTGTCACTCTCATCAC+TGG 0.482192 5.3:+31731554 MS.gene054657:CDS
GTGGTGCCGTTGTTGAAGAA+TGG 0.489948 5.3:+31732391 MS.gene054657:CDS
ATTTCTCAACAATCTTCTGT+TGG 0.503553 5.3:+31731536 MS.gene054657:CDS
ACCATATGCATCTCCGAGAC+AGG 0.504951 5.3:+31734262 MS.gene054657:CDS
AAGATCAACTGTTCCTGTCT+CGG 0.509787 5.3:-31734275 None:intergenic
CATATATTGCTGGAAACTAC+TGG 0.512907 5.3:+31732985 MS.gene054657:CDS
TGGTGCCGTTGTTGAAGAAT+GGG 0.530477 5.3:+31732392 MS.gene054657:CDS
TTCAACCCATTCTTCAACAA+CGG 0.538885 5.3:-31732397 None:intergenic
AGGAACAGTTGATCTTGATA+AGG 0.543424 5.3:+31734282 MS.gene054657:CDS
TCTCTGCACAAGCTGCTCAA+GGG 0.549355 5.3:-31732469 None:intergenic
TGAACTCTCAACATGGGAAG+AGG 0.549391 5.3:+31732298 MS.gene054657:CDS
AAATGTTCGCTTCCAGCTCA+AGG 0.553773 5.3:+31733495 MS.gene054657:CDS
TTGATAAATGAAGGGGAAAG+TGG 0.553774 5.3:+31732372 MS.gene054657:CDS
CATATATTGAACTCTCAACA+TGG 0.555523 5.3:+31732291 MS.gene054657:CDS
AGAAGGCTCTGGAGCTCTAG+AGG 0.581340 5.3:+31733963 MS.gene054657:CDS
GTTGATTTGGTATCTGCAGA+AGG 0.585096 5.3:+31733946 MS.gene054657:CDS
AAAGAGCATTGATAAATGAA+GGG 0.594588 5.3:+31732364 MS.gene054657:CDS
GGACATTGTAATTCTTAACA+AGG 0.607377 5.3:+31733924 MS.gene054657:intron
TATATGAGATCGTTCCTGCT+CGG 0.607859 5.3:+31737216 MS.gene054657:CDS
AAGAGCATTGATAAATGAAG+GGG 0.611247 5.3:+31732365 MS.gene054657:CDS
ATGGATGTATACCGTTGCAA+AGG 0.617207 5.3:+31734615 MS.gene054657:CDS
TCTTGGTGCTGGCAAATCCA+CGG 0.620578 5.3:+31731580 MS.gene054657:CDS
CTGCAGTATCGTAAGCGTGG+CGG 0.624449 5.3:-31734074 None:intergenic
ATATATTGAACTCTCAACAT+GGG 0.629606 5.3:+31732292 MS.gene054657:CDS
CATTCAAGACTCCTTTGCAA+CGG 0.633864 5.3:-31734626 None:intergenic
TGAATCTCAACAGCAAGTGG+TGG 0.637466 5.3:-31731491 None:intergenic
GCAGACTCGTATATGGCTAG+AGG 0.641181 5.3:+31734566 MS.gene054657:intron
AGCTTGTGCAGAGAAAAGAA+AGG 0.645456 5.3:+31732478 MS.gene054657:CDS
GAATGGGTTGAACTTGCTAA+CGG 0.646852 5.3:+31732408 MS.gene054657:CDS
CAGGAAATGAAGATGAGCCA+CGG 0.651825 5.3:-31733522 None:intergenic
GTTTGGTGAGGAAATTGGAG+TGG 0.654078 5.3:+31732341 MS.gene054657:CDS
AGCTCTAGAGGAACTCGAGG+AGG 0.659807 5.3:+31733975 MS.gene054657:CDS
AACCAAAGAATAGATGCCAA+AGG 0.660580 5.3:-31733024 None:intergenic
TTACTGCAGTATCGTAAGCG+TGG 0.673945 5.3:-31734077 None:intergenic
TGGAGCTCTAGAGGAACTCG+AGG 0.681621 5.3:+31733972 MS.gene054657:CDS
ATTGCTGGAAACTACTGGTG+TGG 0.682013 5.3:+31732990 MS.gene054657:CDS
GATATTGAATGAGTTTGGTG+AGG 0.685395 5.3:+31732329 MS.gene054657:CDS
TGTTGAATCTCAACAGCAAG+TGG 0.699592 5.3:-31731494 None:intergenic
TTCCAGCTCAAGGAGCACCG+TGG 0.718846 5.3:+31733505 MS.gene054657:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAATAAATTACTTATC+TGG + chr5.3:31733173-31733192 MS.gene054657:intron 10.0%
!! TTATAAATTAAAGTAAAATG+TGG - chr5.3:31734952-31734971 None:intergenic 10.0%
!!! AAAAAAAAAACAGAATTTTA+AGG - chr5.3:31736294-31736313 None:intergenic 10.0%
!!! ATATATCTTTTTTTTTTTTG+TGG - chr5.3:31733677-31733696 None:intergenic 10.0%
!!! TATATATGTTGATTTTAATT+AGG + chr5.3:31735589-31735608 MS.gene054657:intron 10.0%
!!! TTAACTTATATATTTTGAAA+AGG + chr5.3:31736800-31736819 MS.gene054657:intron 10.0%
!!! TTACTTTAATTTATAATGAT+GGG + chr5.3:31734956-31734975 MS.gene054657:intron 10.0%
!!! TTTACTTTAATTTATAATGA+TGG + chr5.3:31734955-31734974 MS.gene054657:intron 10.0%
!! ATCAAAACTCAAATATTATA+TGG - chr5.3:31737151-31737170 None:intergenic 15.0%
!! ATGAATAAGATAGTATTTAT+AGG + chr5.3:31737263-31737282 MS.gene054657:CDS 15.0%
!! CTAAAAAAAATAATCTTACA+GGG + chr5.3:31732121-31732140 MS.gene054657:intron 15.0%
!! TAAATACTATCTTAGAATTT+GGG - chr5.3:31736338-31736357 None:intergenic 15.0%
!! TAAATCATTTGATTGATATT+TGG + chr5.3:31736875-31736894 MS.gene054657:intron 15.0%
!! TATTTATAAGAGATTCAAAA+GGG - chr5.3:31732888-31732907 None:intergenic 15.0%
!! TCTAAAAAAAATAATCTTAC+AGG + chr5.3:31732120-31732139 MS.gene054657:intron 15.0%
!! TGAGATGTTTATAAAAATAT+TGG + chr5.3:31736065-31736084 MS.gene054657:intron 15.0%
!! TTAGATAAATTAGACATTAT+GGG + chr5.3:31736734-31736753 MS.gene054657:intron 15.0%
!! TTTAGATAAATTAGACATTA+TGG + chr5.3:31736733-31736752 MS.gene054657:intron 15.0%
!!! AAGTATTTTTTAATTGGATT+TGG + chr5.3:31731819-31731838 MS.gene054657:intron 15.0%
!!! AATTAATTCATTTGTTGTTT+GGG + chr5.3:31735281-31735300 MS.gene054657:intron 15.0%
!!! ATGTTTATTTTTTGATTAAC+AGG + chr5.3:31737345-31737364 MS.gene054657:intron 15.0%
!!! ATTGTTTGTTATATATTAAC+TGG + chr5.3:31733574-31733593 MS.gene054657:intron 15.0%
!!! TAGTACAATTAAACATTTTT+AGG + chr5.3:31732939-31732958 MS.gene054657:intron 15.0%
!!! TCATTTTCTTTTTTGTTATT+GGG + chr5.3:31731670-31731689 MS.gene054657:intron 15.0%
!!! TTCATTTTCTTTTTTGTTAT+TGG + chr5.3:31731669-31731688 MS.gene054657:intron 15.0%
!!! TTGTGTAAGTATTTTTTAAT+TGG + chr5.3:31731813-31731832 MS.gene054657:intron 15.0%
!! AAAAGTAATTAATAGTGCAT+TGG - chr5.3:31734882-31734901 None:intergenic 20.0%
!! AAAATAACCTTGTTAACTAT+TGG - chr5.3:31734989-31735008 None:intergenic 20.0%
!! AAACTCAAATATTATATGGA+AGG - chr5.3:31737147-31737166 None:intergenic 20.0%
!! AAAGAAAATGAAAGTGAAAA+AGG - chr5.3:31731661-31731680 None:intergenic 20.0%
!! AAATACTATCTTAGAATTTG+GGG - chr5.3:31736337-31736356 None:intergenic 20.0%
!! AACTCAAATATTATATGGAA+GGG - chr5.3:31737146-31737165 None:intergenic 20.0%
!! ATATTATATGCATAAGCAAT+AGG - chr5.3:31732627-31732646 None:intergenic 20.0%
!! ATTTAATCTTGTGGTTTATT+TGG + chr5.3:31736758-31736777 MS.gene054657:intron 20.0%
!! ATTTATAAGAGATTCAAAAG+GGG - chr5.3:31732887-31732906 None:intergenic 20.0%
!! ATTTATTTCACTATTATCGT+CGG - chr5.3:31736933-31736952 None:intergenic 20.0%
!! CCTGAAAAACATTTATAAAT+CGG + chr5.3:31736256-31736275 MS.gene054657:intron 20.0%
!! CTAAATACTATCTTAGAATT+TGG - chr5.3:31736339-31736358 None:intergenic 20.0%
!! CTATTTATAAGAGATTCAAA+AGG - chr5.3:31732889-31732908 None:intergenic 20.0%
!! TATAGAAAGGGAAAATTAAT+GGG - chr5.3:31731609-31731628 None:intergenic 20.0%
!! TGTTTATAAAAATATTGGCA+TGG + chr5.3:31736070-31736089 MS.gene054657:intron 20.0%
!! TTATAGAAAGGGAAAATTAA+TGG - chr5.3:31731610-31731629 None:intergenic 20.0%
!! TTTACATCATGTTTAAATCA+TGG + chr5.3:31734544-31734563 MS.gene054657:intron 20.0%
!!! AACAAACTATTCAAATTTTG+AGG + chr5.3:31732511-31732530 MS.gene054657:intron 20.0%
!!! AAGATTCTAAAGTTACTAAA+TGG - chr5.3:31736681-31736700 None:intergenic 20.0%
!!! CAATTAATTCATTTGTTGTT+TGG + chr5.3:31735280-31735299 MS.gene054657:intron 20.0%
!!! GCTTTTATCAACATATAAAA+AGG - chr5.3:31733385-31733404 None:intergenic 20.0%
!!! TAATAATTAAGGGTACTATT+GGG - chr5.3:31734906-31734925 None:intergenic 20.0%
!!! TGTCTAATTTATCTAAAACT+TGG - chr5.3:31736730-31736749 None:intergenic 20.0%
!!! TTAATTAGGTATTGTATAAG+AGG + chr5.3:31735603-31735622 MS.gene054657:intron 20.0%
!!! TTTGTTTTGAGAGTTTATAT+TGG + chr5.3:31736220-31736239 MS.gene054657:intron 20.0%
!!! TTTTCATATAAACTATAAGC+TGG + chr5.3:31732678-31732697 MS.gene054657:intron 20.0%
!!! TTTTTTTGTTTTTTGAGCAA+TGG + chr5.3:31733124-31733143 MS.gene054657:intron 20.0%
! AAGAAATATTGTTACAGACT+AGG - chr5.3:31733842-31733861 None:intergenic 25.0%
! ACTATCTATTCTTACACATA+TGG - chr5.3:31736191-31736210 None:intergenic 25.0%
! ACTCAAATATTATATGGAAG+GGG - chr5.3:31737145-31737164 None:intergenic 25.0%
! AGTATTTAGACCTTAGTTAT+AGG + chr5.3:31736350-31736369 MS.gene054657:intron 25.0%
! AGTATTTATAGGTAACATGA+CGG + chr5.3:31737274-31737293 MS.gene054657:intron 25.0%
! AGTCTTCATTAGATGTAATA+TGG + chr5.3:31736429-31736448 MS.gene054657:intron 25.0%
! AGTGTGCATAGTAATAATTA+AGG - chr5.3:31734917-31734936 None:intergenic 25.0%
! AGTTCAAAGAGTCTATTTAT+AGG + chr5.3:31735408-31735427 MS.gene054657:intron 25.0%
! ATATATTGAACTCTCAACAT+GGG + chr5.3:31732292-31732311 MS.gene054657:CDS 25.0%
! ATGCTTCAAATGTAAAATCT+TGG + chr5.3:31736385-31736404 MS.gene054657:intron 25.0%
! ATTATGGGTATTTAATCTTG+TGG + chr5.3:31736749-31736768 MS.gene054657:intron 25.0%
! ATTCCATATCACAAAATCAT+TGG - chr5.3:31732236-31732255 None:intergenic 25.0%
! CACAACAATTTAATGAGAAA+AGG - chr5.3:31733627-31733646 None:intergenic 25.0%
! CCTGTTAGAAATTATAGAAA+GGG - chr5.3:31731621-31731640 None:intergenic 25.0%
! CCTTTCTATAATTTCTAACA+GGG + chr5.3:31731619-31731638 MS.gene054657:intron 25.0%
! CTATTATTTCAACAAGCTAT+AGG - chr5.3:31731703-31731722 None:intergenic 25.0%
! GAAAAACATTTATAAATCGG+AGG + chr5.3:31736259-31736278 MS.gene054657:intron 25.0%
! GTATTTAGACCTTAGTTATA+GGG + chr5.3:31736351-31736370 MS.gene054657:intron 25.0%
! GTGTGCATAGTAATAATTAA+GGG - chr5.3:31734916-31734935 None:intergenic 25.0%
! TAAAGTAAAATGTGGTACTT+TGG - chr5.3:31734944-31734963 None:intergenic 25.0%
! TCTTTAATTAGAGATGAATC+TGG - chr5.3:31735686-31735705 None:intergenic 25.0%
! TGCTTCAAATGTAAAATCTT+GGG + chr5.3:31736386-31736405 MS.gene054657:intron 25.0%
! TTAAGATGTTTATTGAAGCA+CGG - chr5.3:31732577-31732596 None:intergenic 25.0%
! TTATAAAAATATTGGCATGG+TGG + chr5.3:31736073-31736092 MS.gene054657:intron 25.0%
! TTATAAATAGATGCAGTGTT+CGG + chr5.3:31732899-31732918 MS.gene054657:intron 25.0%
!! AAAGTATCATTTGTTTGACA+GGG - chr5.3:31733242-31733261 None:intergenic 25.0%
!! AATTCTTAACAAGGTTGATT+TGG + chr5.3:31733933-31733952 MS.gene054657:CDS 25.0%
!! AGTTAGATGAAGTATCAATT+AGG + chr5.3:31736849-31736868 MS.gene054657:intron 25.0%
!! ATATTTTCAGATAGCATTTG+CGG + chr5.3:31733549-31733568 MS.gene054657:CDS 25.0%
!! CCGATTTATAAATGTTTTTC+AGG - chr5.3:31736259-31736278 None:intergenic 25.0%
!! CTAGTAACACTTTAAAAATC+TGG + chr5.3:31736545-31736564 MS.gene054657:intron 25.0%
!! GAGAAACAAGGTAATTTTTA+TGG + chr5.3:31735727-31735746 MS.gene054657:intron 25.0%
!! TAACACTTTAAAAATCTGGT+TGG + chr5.3:31736549-31736568 MS.gene054657:intron 25.0%
!! TCTTGTTAATTTTGTGATAG+TGG + chr5.3:31733352-31733371 MS.gene054657:intron 25.0%
!! TTTAGGTATTTTGTGTTTGT+AGG + chr5.3:31732956-31732975 MS.gene054657:intron 25.0%
!!! AAAAACAGAATTTTAAGGCA+AGG - chr5.3:31736289-31736308 None:intergenic 25.0%
!!! AAAACAGAATTTTAAGGCAA+GGG - chr5.3:31736288-31736307 None:intergenic 25.0%
!!! AAAAGTATCATTTGTTTGAC+AGG - chr5.3:31733243-31733262 None:intergenic 25.0%
!!! AAAGAGCATTGATAAATGAA+GGG + chr5.3:31732364-31732383 MS.gene054657:CDS 25.0%
!!! GTAATAATTAAGGGTACTAT+TGG - chr5.3:31734907-31734926 None:intergenic 25.0%
!!! TCTTTTTAAAACAGTAACAG+TGG - chr5.3:31735131-31735150 None:intergenic 25.0%
AAACCTTGTAACTGTTATAC+TGG + chr5.3:31732190-31732209 MS.gene054657:intron 30.0%
AAAGAAGATGTCCTAATCAA+TGG + chr5.3:31737378-31737397 MS.gene054657:CDS 30.0%
AAATGCACCAATAGTTAACA+AGG + chr5.3:31734979-31734998 MS.gene054657:intron 30.0%
AAATGTAAAATCTTGGGTGT+GGG + chr5.3:31736392-31736411 MS.gene054657:intron 30.0%
AAATTACAAACCCTTATACG+AGG - chr5.3:31735973-31735992 None:intergenic 30.0%
AACAAATATATCAGACGAAG+AGG - chr5.3:31736632-31736651 None:intergenic 30.0%
AACAGAAGATTGTTGAGAAA+TGG - chr5.3:31731537-31731556 None:intergenic 30.0%
AATATTGTTACAGACTAGGT+AGG - chr5.3:31733838-31733857 None:intergenic 30.0%
AATTAAGTTTGCATTCGCAT+TGG + chr5.3:31735103-31735122 MS.gene054657:intron 30.0%
ACAAATATATCAGACGAAGA+GGG - chr5.3:31736631-31736650 None:intergenic 30.0%
ACTAAAAAGCTTCATGATAG+TGG + chr5.3:31734232-31734251 MS.gene054657:CDS 30.0%
AGTAGAGTAACAATTGAGTT+TGG + chr5.3:31736501-31736520 MS.gene054657:intron 30.0%
AGTATGCTAAAAGAGAAACA+AGG + chr5.3:31735715-31735734 MS.gene054657:intron 30.0%
AGTTATAACAGAGAAGCTAA+AGG - chr5.3:31735344-31735363 None:intergenic 30.0%
ATATTGTTACAGACTAGGTA+GGG - chr5.3:31733837-31733856 None:intergenic 30.0%
ATCAAACCTAAAACCGAAAT+TGG - chr5.3:31737007-31737026 None:intergenic 30.0%
ATGCATAAGCAATAGGATAA+GGG - chr5.3:31732620-31732639 None:intergenic 30.0%
ATTGTCCAAGAAATAGTTCT+TGG + chr5.3:31733284-31733303 MS.gene054657:intron 30.0%
ATTTCTCAACAATCTTCTGT+TGG + chr5.3:31731536-31731555 MS.gene054657:CDS 30.0%
CATATATTGAACTCTCAACA+TGG + chr5.3:31732291-31732310 MS.gene054657:CDS 30.0%
CCCTGTTAGAAATTATAGAA+AGG - chr5.3:31731622-31731641 None:intergenic 30.0%
CCCTTTCTATAATTTCTAAC+AGG + chr5.3:31731618-31731637 MS.gene054657:intron 30.0%
CCTAAGTTTAATTATGAGTC+CGG - chr5.3:31732554-31732573 None:intergenic 30.0%
CTAAATTATCAGCATAGACA+GGG - chr5.3:31733773-31733792 None:intergenic 30.0%
CTCAAATATTATATGGAAGG+GGG - chr5.3:31737144-31737163 None:intergenic 30.0%
GCTTAAAAGAGAAACAAAAC+AGG - chr5.3:31734165-31734184 None:intergenic 30.0%
GGACATTGTAATTCTTAACA+AGG + chr5.3:31733924-31733943 MS.gene054657:intron 30.0%
GGCACTAAAAATATAAACAC+CGG + chr5.3:31732532-31732551 MS.gene054657:intron 30.0%
GTATGGATGTAATGTCTTAT+AGG - chr5.3:31735168-31735187 None:intergenic 30.0%
GTATTTATAGGTAACATGAC+GGG + chr5.3:31737275-31737294 MS.gene054657:intron 30.0%
GTTGTAGAATCTACAATCTA+GGG - chr5.3:31735261-31735280 None:intergenic 30.0%
TAAATTATCAGCATAGACAG+GGG - chr5.3:31733772-31733791 None:intergenic 30.0%
TAGAAAATGCCGAAATTGTT+AGG + chr5.3:31732018-31732037 MS.gene054657:intron 30.0%
TATGCATAAGCAATAGGATA+AGG - chr5.3:31732621-31732640 None:intergenic 30.0%
TCAACTCTATTGCTAATTTC+TGG + chr5.3:31735630-31735649 MS.gene054657:intron 30.0%
TCATCCATTAACGATACTTA+CGG - chr5.3:31733094-31733113 None:intergenic 30.0%
TGTGATATGGAATTGTGAAT+TGG + chr5.3:31732243-31732262 MS.gene054657:intron 30.0%
TGTTGTAGAATCTACAATCT+AGG - chr5.3:31735262-31735281 None:intergenic 30.0%
TTCGAAGTTTCAGTAAATGT+AGG + chr5.3:31736007-31736026 MS.gene054657:intron 30.0%
TTGCACTGTTAAACATAGTT+TGG + chr5.3:31732440-31732459 MS.gene054657:CDS 30.0%
TTGGGAGAAGAAATATGATA+TGG + chr5.3:31734596-31734615 MS.gene054657:CDS 30.0%
TTTAAAAATCTGGTTGGACA+TGG + chr5.3:31736555-31736574 MS.gene054657:intron 30.0%
TTTGGCAAAACAAAATCTTG+TGG + chr5.3:31736776-31736795 MS.gene054657:intron 30.0%
! AATTTTACATGCATAACCAC+TGG - chr5.3:31734773-31734792 None:intergenic 30.0%
! ACATTTTATAGTACCTGTCA+TGG + chr5.3:31733309-31733328 MS.gene054657:intron 30.0%
! TATTTCTTGGACAATTTTGC+GGG - chr5.3:31733279-31733298 None:intergenic 30.0%
! TTACTAGCTCTTGGAATTTA+GGG - chr5.3:31736532-31736551 None:intergenic 30.0%
! TTTAAAGTGTTACTAGCTCT+TGG - chr5.3:31736541-31736560 None:intergenic 30.0%
! TTTTTGGATGATAGATGAAG+TGG - chr5.3:31732095-31732114 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr5.3:31735071-31735090 MS.gene054657:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr5.3:31735090-31735071 None:intergenic 30.0%
!! AAGAGCATTGATAAATGAAG+GGG + chr5.3:31732365-31732384 MS.gene054657:CDS 30.0%
!! CTATTTCTTGGACAATTTTG+CGG - chr5.3:31733280-31733299 None:intergenic 30.0%
!! GAAAGAGCATTGATAAATGA+AGG + chr5.3:31732363-31732382 MS.gene054657:CDS 30.0%
!! TAGTAAAAGTGTCATGTCTA+TGG + chr5.3:31735008-31735027 MS.gene054657:intron 30.0%
!! TTTATTTCTATAAGCTCTCC+AGG - chr5.3:31732717-31732736 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr5.3:31734836-31734817 None:intergenic 30.0%
AACCAAAGAATAGATGCCAA+AGG - chr5.3:31733027-31733046 None:intergenic 35.0%
AAGGACTTGTGAGATTCTTA+GGG - chr5.3:31732786-31732805 None:intergenic 35.0%
AAGTACACAGAACCATAACT+TGG - chr5.3:31735233-31735252 None:intergenic 35.0%
AATTGCCATGTACCAAGTTA+TGG + chr5.3:31735218-31735237 MS.gene054657:intron 35.0%
AGGAACAGTTGATCTTGATA+AGG + chr5.3:31734282-31734301 MS.gene054657:CDS 35.0%
AGTGGAAGAAAGAAGAAAAC+AGG + chr5.3:31737240-31737259 MS.gene054657:CDS 35.0%
ATGTTCTTCTGTATCCAAGA+AGG + chr5.3:31734730-31734749 MS.gene054657:intron 35.0%
CAAATATATCAGACGAAGAG+GGG - chr5.3:31736630-31736649 None:intergenic 35.0%
CAAATGTAAAATCTTGGGTG+TGG + chr5.3:31736391-31736410 MS.gene054657:intron 35.0%
CACTTGAAAACTCACAAGTT+AGG - chr5.3:31732065-31732084 None:intergenic 35.0%
CAGTAGTTTCCAGCAATATA+TGG - chr5.3:31732987-31733006 None:intergenic 35.0%
CATATATTGCTGGAAACTAC+TGG + chr5.3:31732985-31733004 MS.gene054657:CDS 35.0%
CCGGACTCATAATTAAACTT+AGG + chr5.3:31732551-31732570 MS.gene054657:intron 35.0%
CCTAAATTATCAGCATAGAC+AGG - chr5.3:31733774-31733793 None:intergenic 35.0%
CCTGTCTATGCTGATAATTT+AGG + chr5.3:31733771-31733790 MS.gene054657:intron 35.0%
CTACGAGTGTGTTAATGTTA+TGG - chr5.3:31734005-31734024 None:intergenic 35.0%
CTTCCAGTATAACAGTTACA+AGG - chr5.3:31732196-31732215 None:intergenic 35.0%
GCTATCTGAAAATATGCTTC+AGG - chr5.3:31733544-31733563 None:intergenic 35.0%
GCTGTGATATTGAATGAGTT+TGG + chr5.3:31732324-31732343 MS.gene054657:CDS 35.0%
GGAGAATGCTAATACATAGA+TGG - chr5.3:31736609-31736628 None:intergenic 35.0%
GTGTGCAATAAATCTGTAAC+AGG + chr5.3:31735871-31735890 MS.gene054657:intron 35.0%
TAAACCGCAACATTATGCAA+TGG - chr5.3:31732852-31732871 None:intergenic 35.0%
TAAGGACTTGTGAGATTCTT+AGG - chr5.3:31732787-31732806 None:intergenic 35.0%
TCATGCGCTATCAATTAACT+GGG - chr5.3:31736048-31736067 None:intergenic 35.0%
TCTAATTGAGCTCGAACTTA+TGG - chr5.3:31732002-31732021 None:intergenic 35.0%
TGATGAATTGCATACTTTGC+AGG + chr5.3:31734659-31734678 MS.gene054657:CDS 35.0%
TTCAACCCATTCTTCAACAA+CGG - chr5.3:31732400-31732419 None:intergenic 35.0%
TTGATAAATGAAGGGGAAAG+TGG + chr5.3:31732372-31732391 MS.gene054657:CDS 35.0%
TTGTCAAGATCACTGAAGTA+TGG - chr5.3:31735185-31735204 None:intergenic 35.0%
TTTGGCATCTATTCTTTGGT+TGG + chr5.3:31733026-31733045 MS.gene054657:CDS 35.0%
! AATGAGTTTGGTGAGGAAAT+TGG + chr5.3:31732336-31732355 MS.gene054657:CDS 35.0%
! AATTGTGTTTCTACCGAAGT+AGG + chr5.3:31733459-31733478 MS.gene054657:intron 35.0%
! ATAATGTTGCTGCTTCTTTC+AGG + chr5.3:31733903-31733922 MS.gene054657:intron 35.0%
! ATTAGTTTGAATGCCATGAC+AGG - chr5.3:31733325-31733344 None:intergenic 35.0%
! CAATTTTGAACGTCTTCACA+TGG - chr5.3:31736163-31736182 None:intergenic 35.0%
! GATATTGAATGAGTTTGGTG+AGG + chr5.3:31732329-31732348 MS.gene054657:CDS 35.0%
! GTTACTAGCTCTTGGAATTT+AGG - chr5.3:31736533-31736552 None:intergenic 35.0%
! TGTCTCCAAGAACTATTTCT+TGG - chr5.3:31733292-31733311 None:intergenic 35.0%
!! CTAACTTGTGAGTTTTCAAG+TGG + chr5.3:31732063-31732082 MS.gene054657:intron 35.0%
!!! GTTTTAGGTTTGATTCTACC+CGG + chr5.3:31737013-31737032 MS.gene054657:intron 35.0%
AACATCCTCTTGCAAATGCA+AGG + chr5.3:31735841-31735860 MS.gene054657:intron 40.0%
AACCGTCAAACTGTGTTATC+TGG - chr5.3:31735500-31735519 None:intergenic 40.0%
AAGATCAACTGTTCCTGTCT+CGG - chr5.3:31734278-31734297 None:intergenic 40.0%
AATCATGGCAGACTCGTATA+TGG + chr5.3:31734559-31734578 MS.gene054657:intron 40.0%
ACAAGTCCTTATGCTAGTAG+TGG + chr5.3:31732796-31732815 MS.gene054657:intron 40.0%
ACCATTCATTGCTGAAATCC+TGG + chr5.3:31737177-31737196 MS.gene054657:intron 40.0%
ACGTCAAGGACTAAAAGCAA+CGG - chr5.3:31731864-31731883 None:intergenic 40.0%
ACTCTACTTATAACCAGCCA+AGG - chr5.3:31736489-31736508 None:intergenic 40.0%
AGACGGATCTTATACCTTCT+TGG - chr5.3:31734747-31734766 None:intergenic 40.0%
AGATTCTTAGGGAGAGCTTA+TGG - chr5.3:31732775-31732794 None:intergenic 40.0%
AGCTTGTGCAGAGAAAAGAA+AGG + chr5.3:31732478-31732497 MS.gene054657:CDS 40.0%
AGGTCCATTGCATAATGTTG+CGG + chr5.3:31732845-31732864 MS.gene054657:intron 40.0%
ATCACAAAATCATTGGCCGA+GGG - chr5.3:31732229-31732248 None:intergenic 40.0%
ATGGATGTATACCGTTGCAA+AGG + chr5.3:31734615-31734634 MS.gene054657:CDS 40.0%
ATGGCTAGAGGAGATTCTTT+GGG + chr5.3:31734578-31734597 MS.gene054657:CDS 40.0%
CACCTTTGGCATCTATTCTT+TGG + chr5.3:31733022-31733041 MS.gene054657:CDS 40.0%
CAGAACCATAACTTGGTACA+TGG - chr5.3:31735226-31735245 None:intergenic 40.0%
CATTCAAGACTCCTTTGCAA+CGG - chr5.3:31734629-31734648 None:intergenic 40.0%
CTCAATATAATCGCAACACG+CGG - chr5.3:31731906-31731925 None:intergenic 40.0%
CTCATGCGCTATCAATTAAC+TGG - chr5.3:31736049-31736068 None:intergenic 40.0%
CTTAGTTATAGGGTCACTCA+AGG + chr5.3:31736361-31736380 MS.gene054657:intron 40.0%
CTTGAGTGACCCTATAACTA+AGG - chr5.3:31736363-31736382 None:intergenic 40.0%
GAAATAAATGCAGCCCACTT+GGG + chr5.3:31736944-31736963 MS.gene054657:intron 40.0%
GACTACAACAGTTATGCCAA+GGG - chr5.3:31735773-31735792 None:intergenic 40.0%
GATGAGAGTTTGATAGAGCA+AGG + chr5.3:31735916-31735935 MS.gene054657:intron 40.0%
GCTTATCCACTACTAGCATA+AGG - chr5.3:31732805-31732824 None:intergenic 40.0%
GGCATTCAGCCTAACAATTT+CGG - chr5.3:31732030-31732049 None:intergenic 40.0%
TAAACTGCAGTCATGAAGGT+GGG - chr5.3:31734142-31734161 None:intergenic 40.0%
TAAGCATGCTGCACATTTAG+AGG + chr5.3:31734180-31734199 MS.gene054657:intron 40.0%
TAGGCTAGACCATATATTGC+TGG + chr5.3:31732975-31732994 MS.gene054657:intron 40.0%
TAGTCACACACCTCGTATAA+GGG + chr5.3:31735960-31735979 MS.gene054657:intron 40.0%
TATATGAGATCGTTCCTGCT+CGG + chr5.3:31737216-31737235 MS.gene054657:CDS 40.0%
TATCACAAAATCATTGGCCG+AGG - chr5.3:31732230-31732249 None:intergenic 40.0%
TATGGCTAGAGGAGATTCTT+TGG + chr5.3:31734577-31734596 MS.gene054657:CDS 40.0%
TCAGATAAGCTAATCCAAGC+AGG + chr5.3:31732825-31732844 MS.gene054657:intron 40.0%
TCTTTGGTTGGATGAACAGT+TGG + chr5.3:31733038-31733057 MS.gene054657:CDS 40.0%
TGAAATAAATGCAGCCCACT+TGG + chr5.3:31736943-31736962 MS.gene054657:intron 40.0%
TGACTACAACAGTTATGCCA+AGG - chr5.3:31735774-31735793 None:intergenic 40.0%
TGCCAGATAACACAGTTTGA+CGG + chr5.3:31735495-31735514 MS.gene054657:intron 40.0%
TGTGATCAGAACGATCACAA+AGG - chr5.3:31735552-31735571 None:intergenic 40.0%
TGTTGAATCTCAACAGCAAG+TGG - chr5.3:31731497-31731516 None:intergenic 40.0%
TTGGCATCTACTACCTACTT+CGG - chr5.3:31733475-31733494 None:intergenic 40.0%
! ACAGACTAGGTAGGGTATTA+TGG - chr5.3:31733829-31733848 None:intergenic 40.0%
! ACTCTCATCACTGGTTATCT+TGG + chr5.3:31731563-31731582 MS.gene054657:CDS 40.0%
! AGAACAAAGCATTCTCTGCT+AGG - chr5.3:31734460-31734479 None:intergenic 40.0%
! AGCTCTTGGAATTTAGGGTT+TGG - chr5.3:31736527-31736546 None:intergenic 40.0%
! AGTGTGCCAATTTCGGTTTT+AGG + chr5.3:31736998-31737017 MS.gene054657:intron 40.0%
! CGGCCAATGATTTTGTGATA+TGG + chr5.3:31732230-31732249 MS.gene054657:intron 40.0%
! GAGCTTTCAAGCCATTGATT+AGG - chr5.3:31737392-31737411 None:intergenic 40.0%
! GCTGGTTTCATAAACTTTCC+TGG + chr5.3:31732696-31732715 MS.gene054657:intron 40.0%
! GTCACCGTAAGTATCGTTAA+TGG + chr5.3:31733087-31733106 MS.gene054657:intron 40.0%
!! GAATGGGTTGAACTTGCTAA+CGG + chr5.3:31732408-31732427 MS.gene054657:CDS 40.0%
!! GGAAAATTAATGGGTTACCG+TGG - chr5.3:31731600-31731619 None:intergenic 40.0%
!! GTTGATTTGGTATCTGCAGA+AGG + chr5.3:31733946-31733965 MS.gene054657:CDS 40.0%
!!! ACAGAATTTTAAGGCAAGGG+AGG - chr5.3:31736285-31736304 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr5.3:31735075-31735094 MS.gene054657:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr5.3:31735094-31735075 None:intergenic 40.0%
AAATATTGGCATGGTGGCAG+TGG + chr5.3:31736079-31736098 MS.gene054657:intron 45.0%
AAATGTTCGCTTCCAGCTCA+AGG + chr5.3:31733495-31733514 MS.gene054657:CDS 45.0%
AACTCACAAGTTAGGATCCC+AGG - chr5.3:31732057-31732076 None:intergenic 45.0%
ACACAGTTTGACGGTTACAC+AGG + chr5.3:31735504-31735523 MS.gene054657:intron 45.0%
ACCTTGGAGTGTGCCAATTT+CGG + chr5.3:31736991-31737010 MS.gene054657:intron 45.0%
ACTTATAACCAGCCAAGGCA+AGG - chr5.3:31736484-31736503 None:intergenic 45.0%
AGGAATAAGCTAACTGCCTC+TGG + chr5.3:31735428-31735447 MS.gene054657:intron 45.0%
AGTACACTATTTATGCCCCG+TGG - chr5.3:31734376-31734395 None:intergenic 45.0%
AGTCCTTGACGTCAGCTTAT+TGG + chr5.3:31731872-31731891 MS.gene054657:intron 45.0%
ATAAGATCCGTCTTCACCAG+TGG + chr5.3:31734754-31734773 MS.gene054657:intron 45.0%
ATCAACGATTCCTGCTACCA+CGG + chr5.3:31734356-31734375 MS.gene054657:intron 45.0%
ATTGCTGGAAACTACTGGTG+TGG + chr5.3:31732990-31733009 MS.gene054657:CDS 45.0%
CACAGTTTGACGGTTACACA+GGG + chr5.3:31735505-31735524 MS.gene054657:intron 45.0%
CAGGAAATGAAGATGAGCCA+CGG - chr5.3:31733525-31733544 None:intergenic 45.0%
CAGGTAAACTGCAGTCATGA+AGG - chr5.3:31734146-31734165 None:intergenic 45.0%
CATAGACAGGGGAAGTTACT+TGG - chr5.3:31733761-31733780 None:intergenic 45.0%
CATTATGCAATGGACCTGCT+TGG - chr5.3:31732842-31732861 None:intergenic 45.0%
CCAAAATAGCCCACCGAAAT+TGG - chr5.3:31737041-31737060 None:intergenic 45.0%
CCTCTTGCAAATGCAAGGTA+AGG + chr5.3:31735846-31735865 MS.gene054657:intron 45.0%
CCTTACCTTGCATTTGCAAG+AGG - chr5.3:31735849-31735868 None:intergenic 45.0%
CTAGTCACACACCTCGTATA+AGG + chr5.3:31735959-31735978 MS.gene054657:intron 45.0%
CTTATAACCAGCCAAGGCAA+GGG - chr5.3:31736483-31736502 None:intergenic 45.0%
GAAAGCTCTTGCAACCTGTT+AGG + chr5.3:31737404-31737423 MS.gene054657:CDS 45.0%
GCATTCTCTGCTAGGCATTA+TGG - chr5.3:31734452-31734471 None:intergenic 45.0%
GCCAGGATTTCAGCAATGAA+TGG - chr5.3:31737181-31737200 None:intergenic 45.0%
GGACTAAAAGCAACGGAGTT+TGG - chr5.3:31731857-31731876 None:intergenic 45.0%
GTAAACTGCAGTCATGAAGG+TGG - chr5.3:31734143-31734162 None:intergenic 45.0%
GTCCTTGACGTCAGCTTATT+GGG + chr5.3:31731873-31731892 MS.gene054657:intron 45.0%
TGAACTCTCAACATGGGAAG+AGG + chr5.3:31732298-31732317 MS.gene054657:CDS 45.0%
TGAATCTCAACAGCAAGTGG+TGG - chr5.3:31731494-31731513 None:intergenic 45.0%
TGCATAACCACTGGTGAAGA+CGG - chr5.3:31734764-31734783 None:intergenic 45.0%
TGTAAAATCTTGGGTGTGGG+AGG + chr5.3:31736395-31736414 MS.gene054657:intron 45.0%
TTACTGCAGTATCGTAAGCG+TGG - chr5.3:31734080-31734099 None:intergenic 45.0%
TTCATTGCTGAAATCCTGGC+AGG + chr5.3:31737181-31737200 MS.gene054657:intron 45.0%
! AGAATAGATGCCAAAGGTGC+TGG - chr5.3:31733021-31733040 None:intergenic 45.0%
! ATCACTGGTTATCTTGGTGC+TGG + chr5.3:31731569-31731588 MS.gene054657:CDS 45.0%
! ATTCTACCCGGTGCCAATTT+CGG + chr5.3:31737025-31737044 MS.gene054657:intron 45.0%
! GAGCTGGAAGCGAACATTTT+TGG - chr5.3:31733494-31733513 None:intergenic 45.0%
! GTTTGGTGAGGAAATTGGAG+TGG + chr5.3:31732341-31732360 MS.gene054657:CDS 45.0%
!! GGCAGTGGTGTTACTTTGTT+AGG + chr5.3:31736094-31736113 MS.gene054657:intron 45.0%
!! TGGTGCCGTTGTTGAAGAAT+GGG + chr5.3:31732392-31732411 MS.gene054657:CDS 45.0%
!!! CCAATTTCGGTGGGCTATTT+TGG + chr5.3:31737038-31737057 MS.gene054657:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr5.3:31735074-31735093 MS.gene054657:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr5.3:31735093-31735074 None:intergenic 45.0%
!!! TTTTTTTTAGATTTTATTTT+TGG - chr5.3:31732111-31732130 None:intergenic 5.0%
AAGTGAAGACTCCCTTGCCT+TGG + chr5.3:31736469-31736488 MS.gene054657:intron 50.0%
AATCACGCACTCGTGTACTG+AGG - chr5.3:31733417-31733436 None:intergenic 50.0%
ACCATATGCATCTCCGAGAC+AGG + chr5.3:31734262-31734281 MS.gene054657:CDS 50.0%
ACCGAAATTGGCACACTCCA+AGG - chr5.3:31736995-31737014 None:intergenic 50.0%
AGATGCAGTGTTCGGCAAAG+TGG + chr5.3:31732907-31732926 MS.gene054657:intron 50.0%
AGGTGTGTGACTAGACTGTG+TGG - chr5.3:31735953-31735972 None:intergenic 50.0%
ATAAGCTAACTGCCTCTGGC+TGG + chr5.3:31735432-31735451 MS.gene054657:intron 50.0%
CAAGTTAGGATCCCAGGTCA+TGG - chr5.3:31732051-31732070 None:intergenic 50.0%
GACGTCAGCTTATTGGGCAT+TGG + chr5.3:31731879-31731898 MS.gene054657:intron 50.0%
GATGCAGTGTTCGGCAAAGT+GGG + chr5.3:31732908-31732927 MS.gene054657:intron 50.0%
GCAGACTCGTATATGGCTAG+AGG + chr5.3:31734566-31734585 MS.gene054657:intron 50.0%
GGCATTGTCTTGTGCATGCA+CGG + chr5.3:31737296-31737315 MS.gene054657:intron 50.0%
GTCAGCAACTCCTAGATGAC+TGG + chr5.3:31735468-31735487 MS.gene054657:intron 50.0%
TAAATGCAGCCCACTTGGGT+TGG + chr5.3:31736948-31736967 MS.gene054657:intron 50.0%
TAGGCTGAATGCCATGACCT+GGG + chr5.3:31732037-31732056 MS.gene054657:intron 50.0%
TATTTATGCCCCGTGGTAGC+AGG - chr5.3:31734369-31734388 None:intergenic 50.0%
TCAACGATTCCTGCTACCAC+GGG + chr5.3:31734357-31734376 MS.gene054657:intron 50.0%
TCCTGTCTCGGAGATGCATA+TGG - chr5.3:31734266-31734285 None:intergenic 50.0%
TCTCTGCACAAGCTGCTCAA+GGG - chr5.3:31732472-31732491 None:intergenic 50.0%
TCTTTCTTCCACTTCCGAGC+AGG - chr5.3:31737233-31737252 None:intergenic 50.0%
TGCCCAATAAGCTGACGTCA+AGG - chr5.3:31731878-31731897 None:intergenic 50.0%
TGTGGCTAATCCAGCACCTT+TGG + chr5.3:31733008-31733027 MS.gene054657:CDS 50.0%
TTAGGCTGAATGCCATGACC+TGG + chr5.3:31732036-31732055 MS.gene054657:intron 50.0%
TTCTCTGCACAAGCTGCTCA+AGG - chr5.3:31732473-31732492 None:intergenic 50.0%
TTGGTATCTGCAGAAGGCTC+TGG + chr5.3:31733952-31733971 MS.gene054657:CDS 50.0%
! CATCAAGTGAGAGTGTGAGC+TGG + chr5.3:31736119-31736138 MS.gene054657:intron 50.0%
! TGGAAGTGTGTTCGAACCCT+CGG + chr5.3:31732210-31732229 MS.gene054657:intron 50.0%
!! GTGGTGCCGTTGTTGAAGAA+TGG + chr5.3:31732391-31732410 MS.gene054657:CDS 50.0%
!! GTTGGTGTCACTCTCATCAC+TGG + chr5.3:31731554-31731573 MS.gene054657:CDS 50.0%
!! TCTTGGTGCTGGCAAATCCA+CGG + chr5.3:31731580-31731599 MS.gene054657:CDS 50.0%
AGATCGTTCCTGCTCGGAAG+TGG + chr5.3:31737222-31737241 MS.gene054657:CDS 55.0%
CAACGATTCCTGCTACCACG+GGG + chr5.3:31734358-31734377 MS.gene054657:intron 55.0%
CTGCAGTATCGTAAGCGTGG+CGG - chr5.3:31734077-31734096 None:intergenic 55.0%
GCAACTCCTAGATGACTGGC+AGG + chr5.3:31735472-31735491 MS.gene054657:intron 55.0%
TAGCCCACCGAAATTGGCAC+CGG - chr5.3:31737035-31737054 None:intergenic 55.0%
TAGTTCTCTCACTGCCTGCC+AGG - chr5.3:31737198-31737217 None:intergenic 55.0%
! TACCCGGTGCCAATTTCGGT+GGG + chr5.3:31737029-31737048 MS.gene054657:intron 55.0%
!! AGAAGGCTCTGGAGCTCTAG+AGG + chr5.3:31733963-31733982 MS.gene054657:CDS 55.0%
!! AGCTCTAGAGGAACTCGAGG+AGG + chr5.3:31733975-31733994 MS.gene054657:CDS 55.0%
!! TGGAGCTCTAGAGGAACTCG+AGG + chr5.3:31733972-31733991 MS.gene054657:CDS 55.0%
ACCACCAGGCCAACCCAAGT+GGG - chr5.3:31736960-31736979 None:intergenic 60.0%
AGCCCACCGAAATTGGCACC+GGG - chr5.3:31737034-31737053 None:intergenic 60.0%
CTGGCACCTGCCAGTCATCT+AGG - chr5.3:31735481-31735500 None:intergenic 60.0%
GAAGACTCCCTTGCCTTGGC+TGG + chr5.3:31736473-31736492 MS.gene054657:intron 60.0%
! CTACCCGGTGCCAATTTCGG+TGG + chr5.3:31737028-31737047 MS.gene054657:intron 60.0%
!! GTGGTGTTGGCTTGGGACCT+TGG + chr5.3:31736975-31736994 MS.gene054657:intron 60.0%
!! TGGCCTGGTGGTGTTGGCTT+GGG + chr5.3:31736968-31736987 MS.gene054657:intron 60.0%
!! TTCCAGCTCAAGGAGCACCG+TGG + chr5.3:31733505-31733524 MS.gene054657:CDS 60.0%
!! TTGGCCTGGTGGTGTTGGCT+TGG + chr5.3:31736967-31736986 MS.gene054657:intron 60.0%
!! TTGGGTTGGCCTGGTGGTGT+TGG + chr5.3:31736962-31736981 MS.gene054657:intron 60.0%
AGCCACGGTGCTCCTTGAGC+TGG - chr5.3:31733510-31733529 None:intergenic 65.0%
CACCACCAGGCCAACCCAAG+TGG - chr5.3:31736961-31736980 None:intergenic 65.0%
GACACGTGTCAGCCAGCCAG+AGG - chr5.3:31735447-31735466 None:intergenic 65.0%
GGTCCCAAGCCAACACCACC+AGG - chr5.3:31736974-31736993 None:intergenic 65.0%
!! GCAGCCCACTTGGGTTGGCC+TGG + chr5.3:31736953-31736972 MS.gene054657:intron 70.0%
!! GCCCACTTGGGTTGGCCTGG+TGG + chr5.3:31736956-31736975 MS.gene054657:intron 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 31731467 31737425 31731467 ID=MS.gene054657
chr5.3 mRNA 31731467 31737425 31731467 ID=MS.gene054657.t1;Parent=MS.gene054657
chr5.3 exon 31731467 31731601 31731467 ID=MS.gene054657.t1.exon1;Parent=MS.gene054657.t1
chr5.3 CDS 31731467 31731601 31731467 ID=cds.MS.gene054657.t1;Parent=MS.gene054657.t1
chr5.3 exon 31732282 31732499 31732282 ID=MS.gene054657.t1.exon2;Parent=MS.gene054657.t1
chr5.3 CDS 31732282 31732499 31732282 ID=cds.MS.gene054657.t1;Parent=MS.gene054657.t1
chr5.3 exon 31732978 31733092 31732978 ID=MS.gene054657.t1.exon3;Parent=MS.gene054657.t1
chr5.3 CDS 31732978 31733092 31732978 ID=cds.MS.gene054657.t1;Parent=MS.gene054657.t1
chr5.3 exon 31733481 31733570 31733481 ID=MS.gene054657.t1.exon4;Parent=MS.gene054657.t1
chr5.3 CDS 31733481 31733570 31733481 ID=cds.MS.gene054657.t1;Parent=MS.gene054657.t1
chr5.3 exon 31733925 31734095 31733925 ID=MS.gene054657.t1.exon5;Parent=MS.gene054657.t1
chr5.3 CDS 31733925 31734095 31733925 ID=cds.MS.gene054657.t1;Parent=MS.gene054657.t1
chr5.3 exon 31734184 31734303 31734184 ID=MS.gene054657.t1.exon6;Parent=MS.gene054657.t1
chr5.3 CDS 31734184 31734303 31734184 ID=cds.MS.gene054657.t1;Parent=MS.gene054657.t1
chr5.3 exon 31734570 31734680 31734570 ID=MS.gene054657.t1.exon7;Parent=MS.gene054657.t1
chr5.3 CDS 31734570 31734680 31734570 ID=cds.MS.gene054657.t1;Parent=MS.gene054657.t1
chr5.3 exon 31737203 31737284 31737203 ID=MS.gene054657.t1.exon8;Parent=MS.gene054657.t1
chr5.3 CDS 31737203 31737284 31737203 ID=cds.MS.gene054657.t1;Parent=MS.gene054657.t1
chr5.3 exon 31737367 31737425 31737367 ID=MS.gene054657.t1.exon9;Parent=MS.gene054657.t1
chr5.3 CDS 31737367 31737425 31737367 ID=cds.MS.gene054657.t1;Parent=MS.gene054657.t1
Gene Sequence

>MS.gene054657

ATGGAACACGATGAAGACGAAGAACCACCACTTGCTGTTGAGATTCAACAACATAACAACGATGAATCCATTTCTCAACAATCTTCTGTTGGTGTCACTCTCATCACTGGTTATCTTGGTGCTGGCAAATCCACGGTAACCCATTAATTTTCCCTTTCTATAATTTCTAACAGGGTAGCTTAAAGTTGTGTCCTTTTTCACTTTCATTTTCTTTTTTGTTATTGGGTCATGTACCTATAGCTTGTTGAAATAATAGTGTTTCAATGATTTTTTATTTATTTTTTGTTAAATGACTGATGTTAGTAATGTTTAAACATGATTTTAATCTTTACAGTTATAGCGTTTTTTGTGTAAGTATTTTTTAATTGGATTTGGTTTCTGCAAATTCCAAACTCCGTTGCTTTTAGTCCTTGACGTCAGCTTATTGGGCATTGGACCGCGTGTTGCGATTATATTGAGTTAAATATGACGTTAAGAACTAAAAACAACAATTTTTGAATTTGCAGAGACTAAATATAAACAAAATATTTATCCATAAGTTCGAGCTCAATTAGAAAATGCCGAAATTGTTAGGCTGAATGCCATGACCTGGGATCCTAACTTGTGAGTTTTCAAGTGGTTATTGCCACTTCATCTATCATCCAAAAATAAAATCTAAAAAAAATAATCTTACAGGGACTAAAACTAAAAAACGCTATAATTGTAATGACTAAAATCATATTTAAACCTTGTAACTGTTATACTGGAAGTGTGTTCGAACCCTCGGCCAATGATTTTGTGATATGGAATTGTGAATTGGTTGTTTTGAATTTCAGTTAGTGAATCATATATTGAACTCTCAACATGGGAAGAGGATTGCTGTGATATTGAATGAGTTTGGTGAGGAAATTGGAGTGGAAAGAGCATTGATAAATGAAGGGGAAAGTGGTGCCGTTGTTGAAGAATGGGTTGAACTTGCTAACGGCTGTATTTGTTGCACTGTTAAACATAGTTTGGTTCAAGCCCTTGAGCAGCTTGTGCAGAGAAAAGAAAGGTAAAATACAAAACAAACTATTCAAATTTTGAGGCACTAAAAATATAAACACCGGACTCATAATTAAACTTAGGCCGTGCTTCAATAAACATCTTAATTAAGCACGTATAGCATGTACCCTTATCCTATTGCTTATGCATATAATATTTTTATAACGAGATAAAATAAGCTCAAACTTTTTTCATATAAACTATAAGCTGGTTTCATAAACTTTCCTGGAGAGCTTATAGAAATAAATTGAAAACAGCTTACAGACATGTCATGAGCTGTTTCCATAAGCTCTCCCTAAGAATCTCACAAGTCCTTATGCTAGTAGTGGATAAGCTCAGATAAGCTAATCCAAGCAGGTCCATTGCATAATGTTGCGGTTTACTTTTATCAAATCCCCTTTTGAATCTCTTATAAATAGATGCAGTGTTCGGCAAAGTGGGTCATATTTTAGTACAATTAAACATTTTTAGGTATTTTGTGTTTGTAGGCTAGACCATATATTGCTGGAAACTACTGGTGTGGCTAATCCAGCACCTTTGGCATCTATTCTTTGGTTGGATGAACAGTTGGAATCTGATGTAAAGCTTGATTCTATCGTCACCGTAAGTATCGTTAATGGATGAAATTGATTACTTTTTTTGTTTTTTGAGCAATGGATTTTGCTTCATTTTCTATACATTGTATTTAAATAAATTACTTATCTGGTATATTGTTGTATAACAACATGTTTGCTTATAGTTGTTTTATACCCTGTCAAACAAATGATACTTTTTTAGTTTCTATCACCCGCAAAATTGTCCAAGAAATAGTTCTTGGAGACATTTTATAGTACCTGTCATGGCATTCAAACTAATATGCTTATCTTGTTAATTTTGTGATAGTGGCTTAGTTCCTTTTTATATGTTGATAAAAGCTGTTTCTTTCCTCAGTACACGAGTGCGTGATTTGTGCATCATAGTATCTTTTCTAATTGTGTTTCTACCGAAGTAGGTAGTAGATGCCAAAAATGTTCGCTTCCAGCTCAAGGAGCACCGTGGCTCATCTTCATTTCCTGAAGCATATTTTCAGATAGCATTTGCGGTAATTGTTTGTTATATATTAACTGGATTTCAGTTATTGATAACATATTTTTTCCTTTTCTCATTAAATTGTTGTGATATTTTTATATATTCGAAGATTATCTCCACAAAAAAAAAAAAGATATATGAAGATTAGAGAAAAAATTGTGATAGAAGTAGCACTAAAAAACTACATTTCACTAACAAAACCAAGTAACTTCCCCTGTCTATGCTGATAATTTAGGTCAAATGCTAGTATAGCACAACTCGCAAAGTACCATAATACCCTACCTAGTCTGTAACAATATTTCTTAATGAGAATTTCACACAATAGAGTTGTATGCAGAAGTGCTAATAATGTTGCTGCTTCTTTCAGGACATTGTAATTCTTAACAAGGTTGATTTGGTATCTGCAGAAGGCTCTGGAGCTCTAGAGGAACTCGAGGAGGAAATCCATAACATTAACACACTCGTAGAGATAATTCATTCTGTGCGATGTCAAGTTGACTTATCTAAGATATTGAACCGCCACGCTTACGATACTGCAGTAAGTTGTACATATTTTTGTTCTTCATCTATAGTCTTTTCTTCCCACCTTCATGACTGCAGTTTACCTGTTTTGTTTCTCTTTTAAGCATGCTGCACATTTAGAGGCATTGTTAGAAGAAAGTCGTTCTTTGTCTACTAAAAAGCTTCATGATAGTGGCGTGAGAACCATATGCATCTCCGAGACAGGAACAGTTGATCTTGATAAGGTAGATTTTCAAATTTCGTTCATGATGTTACTGTAGATTACATTATATATAAATCAACGATTCCTGCTACCACGGGGCATAAATAGTGTACTGCTTTTACTTCACTTAAATGATAAATCTCAATCTATCATTCTAGTGTTTGCTTCCATAATGCCTAGCAGAGAATGCTTTGTTCTTTTATTGAATTCATTTTTCAAAATTAAATCTTTCGAATAAACACTTTTCAGTCTCAACTTGTATTTTACATCATGTTTAAATCATGGCAGACTCGTATATGGCTAGAGGAGATTCTTTGGGAGAAGAAATATGATATGGATGTATACCGTTGCAAAGGAGTCTTGAATGTTCAAAGCTCTGATGAATTGCATACTTTGCAGGTAAATTATTCTTAATGTCATTACAATATTTTGTTCATACACTACTAAAATGTTCTTCTGTATCCAAGAAGGTATAAGATCCGTCTTCACCAGTGGTTATGCATGTAAAATTTTGTTTATGTTTTACTCCCTCCGTTTCAAAATGAGTGTCGTTTTAGTCAAAAAAATTTGTTTCAAAATGAATGTCACTTTCAGTTTCCAATGCACTATTAATTACTTTTTCCCAATAGTACCCTTAATTATTACTATGCACACTACTTCCAAAGTACCACATTTTACTTTAATTTATAATGATGGGAAATGCACCAATAGTTAACAAGGTTATTTTAGTAAAAGTGTCATGTCTATGGACAACATTATTGCATTTCTTAATATGTGTGTAACAACCTAAAACGACACTCATTTTGAAACGGAGGGAGTATAATTAAGTTTGCATTCGCATTGGCTCCACTGTTACTGTTTTAAAAAGATATTTAGTGTACTACCTATAAGACATTACATCCATACTTCAGTGATCTTGACAAGTAAACTTTGTTAAATTGCCATGTACCAAGTTATGGTTCTGTGTACTTTCAGTCCCTAGATTGTAGATTCTACAACAATTAATTCATTTGTTGTTTGGGAATTAATAGAAAACTGTAATGTGTAGAATCTAGAGAGCCTTTAGCTTCTCTGTTATAACTGTTTTTGTGAATTCTGTTAAAATGATTTCTCAGTTAGTTACATGAGTTCAAAGAGTCTATTTATAGGAATAAGCTAACTGCCTCTGGCTGGCTGACACGTGTCAGTCAGCAACTCCTAGATGACTGGCAGGTGCCAGATAACACAGTTTGACGGTTACACAGGGAGAGTAATCTTGTGTGACATTCCTTTGTGATCGTTCTGATCACAATCTATCTATACTAAGCTATATATGTTGATTTTAATTAGGTATTGTATAAGAGGAATTTCAACTCTATTGCTAATTTCTGGATATTCATATTTGAGTTGAAAACAAAATGTCCAGATTCATCTCTAATTAAAGAGAAACAAAAAGTATGCTAAAAGAGAAACAAGGTAATTTTTATGGTATCATTTAGTCAAAAAGATCCCTTGGCATAACTGTTGTAGTCATTATTGTTTGACTATAAGACATCATTAGTATCTTAGTAAGTAATCGAAACATCCTCTTGCAAATGCAAGGTAAGGCTGTGTGCAATAAATCTGTAACAGGTCTGACATTGTCGTGAACTCGTGATGAGAGTTTGATAGAGCAAGGTCGTATGTTTTCCACACAGTCTAGTCACACACCTCGTATAAGGGTTTGTAATTTGTTGAAAAAATGCTTTCGAAGTTTCAGTAAATGTAGGAATTAAGTTTATCATCCCAGTTAATTGATAGCGCATGAGATGTTTATAAAAATATTGGCATGGTGGCAGTGGTGTTACTTTGTTAGGCACATCAAGTGAGAGTGTGAGCTGGCAAGTGATGTAAATCTAACCATGTGAAGACGTTCAAAATTGATTGACCATATGTGTAAGAATAGATAGTCAAGATTAGTTTGTTTTGAGAGTTTATATTGGATATATAATACGACCTGAAAAACATTTATAAATCGGAGGCCTCCCTTGCCTTAAAATTCTGTTTTTTTTTTTTAATTTGAGTTAGACTCAACCCCAAATTCTAAGATAGTATTTAGACCTTAGTTATAGGGTCACTCAAGGAATGCTTCAAATGTAAAATCTTGGGTGTGGGAGGTTAGTCTCTTGAGTCTTCATTAGATGTAATATGGCTTGAAAAAGTGTTTATAAGTGAAGACTCCCTTGCCTTGGCTGGTTATAAGTAGAGTAACAATTGAGTTTGGCCAAACCCTAAATTCCAAGAGCTAGTAACACTTTAAAAATCTGGTTGGACATGGATGACTGTCTCATGTAAAATCAATAACACCATCTATGTATTAGCATTCTCCCCTCTTCGTCTGATATATTTGTTCACTTGCTAATCTTAAAACATTTACTCCATTTAGTAACTTTAGAATCTTTGAGTCATTGAATCATGTAATATACACCAAGTTTTAGATAAATTAGACATTATGGGTATTTAATCTTGTGGTTTATTTGGCAAAACAAAATCTTGTGGTTTAACTTATATATTTTGAAAAGGATGTTGTACATTAAAATAAAGTAGTTAGTTAGATGAAGTATCAATTAGGTTTTAAATCATTTGATTGATATTTGGTATACTCAATTTTATCAAATAAGAAATTTGATCCGACGATAATAGTGAAATAAATGCAGCCCACTTGGGTTGGCCTGGTGGTGTTGGCTTGGGACCTTGGAGTGTGCCAATTTCGGTTTTAGGTTTGATTCTACCCGGTGCCAATTTCGGTGGGCTATTTTGGCTTCTTCAACATAAAAGAAAGTGAAATAAATGCTTACAAATTTTATTAAAAAGTAGTAAGTTTGAGAAATACTCACTATGCCCCCTTCCATATAATATTTGAGTTTTGATTTTTAAACCATTCATTGCTGAAATCCTGGCAGGCAGTGAGAGAACTATATGAGATCGTTCCTGCTCGGAAGTGGAAGAAAGAAGAAAACAGGATGAATAAGATAGTATTTATAGGTAACATGACGGGCATTGTCTTGTGCATGCACGGATTTGAATATTCTTCATATTGTTAATATGTTTATTTTTTGATTAACAGGTCATAATCTGAAAGAAGATGTCCTAATCAATGGCTTGAAAGCTCTTGCAACCTGTTAG

Protein sequence

>MS.gene054657.t1

MEHDEDEEPPLAVEIQQHNNDESISQQSSVGVTLITGYLGAGKSTLVNHILNSQHGKRIAVILNEFGEEIGVERALINEGESGAVVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGVANPAPLASILWLDEQLESDVKLDSIVTVVDAKNVRFQLKEHRGSSSFPEAYFQIAFADIVILNKVDLVSAEGSGALEELEEEIHNINTLVEIIHSVRCQVDLSKILNRHAYDTAHAAHLEALLEESRSLSTKKLHDSGVRTICISETGTVDLDKTRIWLEEILWEKKYDMDVYRCKGVLNVQSSDELHTLQAVRELYEIVPARKWKKEENRMNKIVFIGHNLKEDVLINGLKALATC