Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067141.t1 | AES73712.2 | 98.1 | 262 | 2 | 1 | 1 | 259 | 48 | 309 | 8.00E-139 | 503.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067141.t1 | B6IRQ7 | 52.6 | 173 | 81 | 1 | 85 | 257 | 5 | 176 | 5.6e-40 | 166.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067141.t1 | G7JBP6 | 98.1 | 262 | 2 | 1 | 1 | 259 | 48 | 309 | 5.7e-139 | 503.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050134 | MS.gene067141 | 0.81604 | 6.79E-52 | -1.69E-46 |
| MS.gene050791 | MS.gene067141 | 0.823618 | 1.26E-53 | -1.69E-46 |
| MS.gene053224 | MS.gene067141 | 0.8152 | 1.04E-51 | -1.69E-46 |
| MS.gene057272 | MS.gene067141 | 0.811991 | 5.31E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067141.t1 | MTR_3g107920 | 98.092 | 262 | 2 | 1 | 1 | 259 | 48 | 309 | 0.0 | 526 |
| MS.gene067141.t1 | MTR_8g006995 | 36.612 | 183 | 110 | 4 | 78 | 256 | 50 | 230 | 3.06e-23 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067141.t1 | AT2G20060 | 65.693 | 274 | 72 | 4 | 1 | 259 | 1 | 267 | 3.55e-125 | 358 |
| MS.gene067141.t1 | AT1G07320 | 31.500 | 200 | 117 | 6 | 66 | 256 | 43 | 231 | 1.13e-15 | 75.1 |
| MS.gene067141.t1 | AT1G07320 | 31.500 | 200 | 117 | 6 | 66 | 256 | 43 | 231 | 1.15e-15 | 75.1 |
| MS.gene067141.t1 | AT1G07320 | 31.500 | 200 | 117 | 6 | 66 | 256 | 43 | 231 | 1.22e-15 | 75.1 |
| MS.gene067141.t1 | AT1G07320 | 31.500 | 200 | 117 | 6 | 66 | 256 | 43 | 231 | 1.22e-15 | 75.1 |
Find 63 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACGAAGACAAGGGCTTTA+TGG | 0.163918 | 3.4:+93805125 | MS.gene067141:CDS |
| CCCAGTGCTGCTGGGTTATA+TGG | 0.172532 | 3.4:+93804315 | MS.gene067141:CDS |
| GCTTCTAGTGTTTGAGGATT+TGG | 0.223422 | 3.4:+93809065 | MS.gene067141:intron |
| TTTGATTCACCCAGTGCTGC+TGG | 0.304551 | 3.4:+93804306 | MS.gene067141:CDS |
| TTGCTCGACCAGTTCCCTTT+TGG | 0.310177 | 3.4:-93806159 | None:intergenic |
| ATCTACGATCAGAAGTTTCT+TGG | 0.323553 | 3.4:-93809145 | None:intergenic |
| TCGTTGTGAAAGTTGGTAAC+TGG | 0.350576 | 3.4:-93805108 | None:intergenic |
| ATAAGAACGAAGTAGCCTTT+TGG | 0.352444 | 3.4:-93804262 | None:intergenic |
| CCAGTGCTGCTGGGTTATAT+GGG | 0.354877 | 3.4:+93804316 | MS.gene067141:CDS |
| ACTTCGTTCTTATCAATCCT+TGG | 0.359360 | 3.4:+93804272 | MS.gene067141:CDS |
| ATTAGTGAGGTCAGTGGGAC+TGG | 0.362388 | 3.4:+93806121 | MS.gene067141:CDS |
| TATACAGCTTCTAGTGTTTG+AGG | 0.367365 | 3.4:+93809059 | MS.gene067141:intron |
| CCCATATAACCCAGCAGCAC+TGG | 0.368405 | 3.4:-93804316 | None:intergenic |
| GAGTTTGAAAGCGTGACTTC+GGG | 0.393295 | 3.4:-93806332 | None:intergenic |
| GCAACATCTGAGCGTGATAT+AGG | 0.405707 | 3.4:+93804538 | MS.gene067141:CDS |
| AAAGCGTGACTTCGGGGCTT+AGG | 0.410919 | 3.4:-93806325 | None:intergenic |
| TGGGTCATTGCGTGGGCCTC+AGG | 0.414756 | 3.4:+93806186 | MS.gene067141:CDS |
| CTTCGTTCTTATCAATCCTT+GGG | 0.423517 | 3.4:+93804273 | MS.gene067141:CDS |
| CATTTCTGCTCACCGTATCT+TGG | 0.423638 | 3.4:+93804347 | MS.gene067141:CDS |
| CAATAAGAAGGTTCGGCGAC+TGG | 0.432512 | 3.4:+93806354 | MS.gene067141:CDS |
| TTATGCTGCAGGGCTCTGTC+AGG | 0.442320 | 3.4:+93805074 | MS.gene067141:intron |
| GAGAAAGCCTTGGAACCAAA+AGG | 0.454529 | 3.4:+93806144 | MS.gene067141:CDS |
| TCTAGTGTTTGAGGATTTGG+AGG | 0.457747 | 3.4:+93809068 | MS.gene067141:CDS |
| TGAGTTTGAAAGCGTGACTT+CGG | 0.462197 | 3.4:-93806333 | None:intergenic |
| GCAGCGTGCAAAACGCCAAC+AGG | 0.466799 | 3.4:+93805212 | MS.gene067141:CDS |
| CTTGTCTTCGTTGTGAAAGT+TGG | 0.471718 | 3.4:-93805115 | None:intergenic |
| TCAAACTCAATAAGAAGGTT+CGG | 0.474336 | 3.4:+93806347 | MS.gene067141:CDS |
| CGCTTTCAAACTCAATAAGA+AGG | 0.480982 | 3.4:+93806342 | MS.gene067141:CDS |
| CAGTAGAAGTAGAAAAGCGT+TGG | 0.484013 | 3.4:-93804471 | None:intergenic |
| TGAACTATATCCTTCCGAAT+AGG | 0.487787 | 3.4:-93805174 | None:intergenic |
| CCTTGGAACCAAAAGGGAAC+TGG | 0.491414 | 3.4:+93806151 | MS.gene067141:CDS |
| TGGCTTCTTTCATCTCCAAA+AGG | 0.496230 | 3.4:+93804247 | MS.gene067141:CDS |
| GCAAGGCATGGGTCATTGCG+TGG | 0.496788 | 3.4:+93806178 | MS.gene067141:CDS |
| TTGATTCACCCAGTGCTGCT+GGG | 0.499368 | 3.4:+93804307 | MS.gene067141:CDS |
| AAACTGATACTTACAATGGA+TGG | 0.519437 | 3.4:-93809231 | None:intergenic |
| CTGTCAGCTCGTGCAGCAGA+AGG | 0.521868 | 3.4:+93806391 | MS.gene067141:CDS |
| CCATATAACCCAGCAGCACT+GGG | 0.532120 | 3.4:-93804315 | None:intergenic |
| AATAAGAAGGTTCGGCGACT+GGG | 0.536871 | 3.4:+93806355 | MS.gene067141:CDS |
| AAAGCGTTGGGTGATTGATC+CGG | 0.543562 | 3.4:-93804458 | None:intergenic |
| TTAGTGAGGTCAGTGGGACT+GGG | 0.544271 | 3.4:+93806122 | MS.gene067141:CDS |
| GTGGGACTGGGAGAAAGCCT+TGG | 0.549232 | 3.4:+93806134 | MS.gene067141:CDS |
| GTTCTTATCAATCCTTGGGA+CGG | 0.549673 | 3.4:+93804277 | MS.gene067141:CDS |
| CAACTTTCACAACGAAGACA+AGG | 0.552359 | 3.4:+93805116 | MS.gene067141:CDS |
| AGAAAGCCTTGGAACCAAAA+GGG | 0.558506 | 3.4:+93806145 | MS.gene067141:CDS |
| GGAACTGGTCGAGCAAGGCA+TGG | 0.559028 | 3.4:+93806166 | MS.gene067141:CDS |
| GAATGCAATGTACCAAGATA+CGG | 0.566350 | 3.4:-93804359 | None:intergenic |
| AGCTCGTGCAGCAGAAGGAA+AGG | 0.568393 | 3.4:+93806396 | MS.gene067141:CDS |
| CAAGGCATGGGTCATTGCGT+GGG | 0.570939 | 3.4:+93806179 | MS.gene067141:CDS |
| AGTAGAAGTAGAAAAGCGTT+GGG | 0.572426 | 3.4:-93804470 | None:intergenic |
| AAACTATTAGTGAGGTCAGT+GGG | 0.576745 | 3.4:+93806116 | MS.gene067141:CDS |
| CAGTGCTGCTGGGTTATATG+GGG | 0.586267 | 3.4:+93804317 | MS.gene067141:CDS |
| GAACTGGTCGAGCAAGGCAT+GGG | 0.586611 | 3.4:+93806167 | MS.gene067141:CDS |
| ATCAAAGCAGCGCCGTCCCA+AGG | 0.588028 | 3.4:-93804289 | None:intergenic |
| AAAAGGGAACTGGTCGAGCA+AGG | 0.599214 | 3.4:+93806161 | MS.gene067141:CDS |
| AACTTTCACAACGAAGACAA+GGG | 0.614854 | 3.4:+93805117 | MS.gene067141:CDS |
| AATGAATGGCAACAGTTCAG+GGG | 0.626239 | 3.4:+93806283 | MS.gene067141:intron |
| AGGGGTGGTGAAGCGAAGCA+TGG | 0.631679 | 3.4:+93806301 | MS.gene067141:CDS |
| CACGCTGCCACAAAACAACA+CGG | 0.652436 | 3.4:-93805197 | None:intergenic |
| AAACTTCTGATCGTAGATGA+CGG | 0.659438 | 3.4:+93809150 | MS.gene067141:CDS |
| GAATGGCAACAGTTCAGGGG+TGG | 0.663853 | 3.4:+93806286 | MS.gene067141:intron |
| AAAACTATTAGTGAGGTCAG+TGG | 0.674538 | 3.4:+93806115 | MS.gene067141:CDS |
| AGTTTGAAAGCGTGACTTCG+GGG | 0.691763 | 3.4:-93806331 | None:intergenic |
| TCACGCTCAGATGTTGCGAG+AGG | 0.692190 | 3.4:-93804532 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCAAATAGAAAATTTA+TGG | - | chr3.4:93807480-93807499 | None:intergenic | 10.0% |
| !! | GTAATTTAAAAAATTATAGT+GGG | - | chr3.4:93807431-93807450 | None:intergenic | 10.0% |
| !!! | ATTATTATTTTTCCATATTT+TGG | - | chr3.4:93808260-93808279 | None:intergenic | 10.0% |
| !!! | CACTATAATTTTTTAAATTA+CGG | + | chr3.4:93807430-93807449 | MS.gene067141:intron | 10.0% |
| !!! | TATTTAATTTTTAAGAAAGA+AGG | - | chr3.4:93806456-93806475 | None:intergenic | 10.0% |
| !!! | TTATTATTTTTCCATATTTT+GGG | - | chr3.4:93808259-93808278 | None:intergenic | 10.0% |
| !!! | TTTATAAATTTTCATTTAAC+AGG | - | chr3.4:93807146-93807165 | None:intergenic | 10.0% |
| !!! | TTTTATTATAGACAATTTAA+AGG | + | chr3.4:93807747-93807766 | MS.gene067141:intron | 10.0% |
| !! | AAAACTTAGATTTGTATTTA+TGG | - | chr3.4:93804913-93804932 | None:intergenic | 15.0% |
| !! | AAATTGTCTATAATAAAAGT+TGG | - | chr3.4:93807745-93807764 | None:intergenic | 15.0% |
| !! | AACTCATAAAATAAAGAAAA+AGG | + | chr3.4:93808775-93808794 | MS.gene067141:intron | 15.0% |
| !! | AATAACAAAAAGTTAGTTAT+AGG | + | chr3.4:93807797-93807816 | MS.gene067141:intron | 15.0% |
| !! | AATTGTCTATAATAAAAGTT+GGG | - | chr3.4:93807744-93807763 | None:intergenic | 15.0% |
| !! | ACAGTTATATTGATATATAT+TGG | + | chr3.4:93804862-93804881 | MS.gene067141:intron | 15.0% |
| !! | ACTTAGATATAAATATCTTA+TGG | + | chr3.4:93804766-93804785 | MS.gene067141:intron | 15.0% |
| !! | ATAACAAAAAGTTAGTTATA+GGG | + | chr3.4:93807798-93807817 | MS.gene067141:intron | 15.0% |
| !! | ATATGGAAAAATAATAATCT+AGG | + | chr3.4:93808262-93808281 | MS.gene067141:intron | 15.0% |
| !! | ATCTAAGTATATTATTAATG+TGG | + | chr3.4:93805047-93805066 | MS.gene067141:intron | 15.0% |
| !! | ATTACAAAAATAAACCAATA+TGG | - | chr3.4:93807170-93807189 | None:intergenic | 15.0% |
| !! | CGTAATTTAAAAAATTATAG+TGG | - | chr3.4:93807432-93807451 | None:intergenic | 15.0% |
| !! | TAAATTAACTATTCCATATT+AGG | - | chr3.4:93807506-93807525 | None:intergenic | 15.0% |
| !! | TATGAATATGTGATTATAAA+CGG | + | chr3.4:93806764-93806783 | MS.gene067141:intron | 15.0% |
| !! | TTACAAAAATAAACCAATAT+GGG | - | chr3.4:93807169-93807188 | None:intergenic | 15.0% |
| !! | TTATTTATTTAAATGTAGAC+CGG | + | chr3.4:93804439-93804458 | MS.gene067141:intron | 15.0% |
| !!! | ATTATCTTAGAATTTTGATT+CGG | - | chr3.4:93807968-93807987 | None:intergenic | 15.0% |
| !!! | ATTTGAAATTTATCCTAATA+TGG | + | chr3.4:93807490-93807509 | MS.gene067141:intron | 15.0% |
| !! | AAAAAAAGAAACATTGTCAA+AGG | - | chr3.4:93804943-93804962 | None:intergenic | 20.0% |
| !! | AAAATATTAAAGAAAGTAGC+TGG | - | chr3.4:93807015-93807034 | None:intergenic | 20.0% |
| !! | AAATATTAAAGAAAGTAGCT+GGG | - | chr3.4:93807014-93807033 | None:intergenic | 20.0% |
| !! | AAGTATAAAAGGGATAATTA+TGG | - | chr3.4:93808945-93808964 | None:intergenic | 20.0% |
| !! | AATATATCAATGGTTATCAA+TGG | + | chr3.4:93807858-93807877 | MS.gene067141:intron | 20.0% |
| !! | AATGAATGTCTGTTTATAAA+TGG | + | chr3.4:93808113-93808132 | MS.gene067141:intron | 20.0% |
| !! | AATTCTTTCATTTGTCAATT+AGG | - | chr3.4:93805622-93805641 | None:intergenic | 20.0% |
| !! | AGATGTTAGAATATATCATA+TGG | + | chr3.4:93808569-93808588 | MS.gene067141:intron | 20.0% |
| !! | ATAGTCATAGGATATATAAA+GGG | - | chr3.4:93805935-93805954 | None:intergenic | 20.0% |
| !! | ATATACAAATTGCTTTAGTA+TGG | + | chr3.4:93806862-93806881 | MS.gene067141:intron | 20.0% |
| !! | ATGAATATGTGATTATAAAC+GGG | + | chr3.4:93806765-93806784 | MS.gene067141:intron | 20.0% |
| !! | ATGAATGTCTGTTTATAAAT+GGG | + | chr3.4:93808114-93808133 | MS.gene067141:intron | 20.0% |
| !! | ATTGAAACATATACAATTCT+TGG | - | chr3.4:93805515-93805534 | None:intergenic | 20.0% |
| !! | GAAAAAATTCAAAAAGTTCT+TGG | - | chr3.4:93809109-93809128 | None:intergenic | 20.0% |
| !! | GAAAATTTATAAACCCATAT+TGG | + | chr3.4:93807153-93807172 | MS.gene067141:intron | 20.0% |
| !! | GATAAAAAGAAAAATGATTG+AGG | - | chr3.4:93805372-93805391 | None:intergenic | 20.0% |
| !! | GATATTTATATCTAAGTTAC+AGG | - | chr3.4:93804763-93804782 | None:intergenic | 20.0% |
| !! | TAAATATTAAAAAAAGGACG+TGG | + | chr3.4:93807549-93807568 | MS.gene067141:intron | 20.0% |
| !! | TACAGTTAAACTAGTATAAA+TGG | - | chr3.4:93808618-93808637 | None:intergenic | 20.0% |
| !! | TATAACTTTACAGCAAAAAA+AGG | - | chr3.4:93808347-93808366 | None:intergenic | 20.0% |
| !! | TATTATAGACAATTTAAAGG+CGG | + | chr3.4:93807750-93807769 | MS.gene067141:intron | 20.0% |
| !! | TGTATTTGGTATTCAAATTA+CGG | + | chr3.4:93807383-93807402 | MS.gene067141:intron | 20.0% |
| !!! | AAACATATTGTTTCATGTTT+TGG | + | chr3.4:93806576-93806595 | MS.gene067141:intron | 20.0% |
| !!! | ACAATATTCTTATTTCTTGT+AGG | + | chr3.4:93806631-93806650 | MS.gene067141:intron | 20.0% |
| !!! | ATGTTTTTTCTTTTTGAAAC+TGG | + | chr3.4:93807296-93807315 | MS.gene067141:intron | 20.0% |
| !!! | ATTTAAAAAATTATAGTGGG+TGG | - | chr3.4:93807428-93807447 | None:intergenic | 20.0% |
| !!! | TCTGAAAAATATTTTATGCA+GGG | + | chr3.4:93806929-93806948 | MS.gene067141:intron | 20.0% |
| !!! | TTTGAATTTTTTCAATCAAC+TGG | + | chr3.4:93809116-93809135 | MS.gene067141:CDS | 20.0% |
| !!! | TTTGTAATTTTTCATGTGAA+AGG | + | chr3.4:93807182-93807201 | MS.gene067141:intron | 20.0% |
| !!! | TTTTGGACAATAAATAACTA+AGG | + | chr3.4:93805467-93805486 | MS.gene067141:intron | 20.0% |
| ! | AAACTAGTATAAATGGTTCT+AGG | - | chr3.4:93808611-93808630 | None:intergenic | 25.0% |
| ! | AATATTAAAGAAAGTAGCTG+GGG | - | chr3.4:93807013-93807032 | None:intergenic | 25.0% |
| ! | ATAGGATATATAAAGGGAAA+AGG | - | chr3.4:93805929-93805948 | None:intergenic | 25.0% |
| ! | ATATAGCTGTAACAAATATC+AGG | + | chr3.4:93805319-93805338 | MS.gene067141:intron | 25.0% |
| ! | ATATATCAATATAACTGTCG+TGG | - | chr3.4:93804860-93804879 | None:intergenic | 25.0% |
| ! | ATTATAGACAATTTAAAGGC+GGG | + | chr3.4:93807751-93807770 | MS.gene067141:intron | 25.0% |
| ! | ATTCATATATCATCCAATCT+GGG | - | chr3.4:93808096-93808115 | None:intergenic | 25.0% |
| ! | ATTTATGTGACTTTGCTTAA+GGG | + | chr3.4:93807329-93807348 | MS.gene067141:intron | 25.0% |
| ! | CCAGAATTTATTCTAATGTA+AGG | - | chr3.4:93805648-93805667 | None:intergenic | 25.0% |
| ! | CCTTACATTAGAATAAATTC+TGG | + | chr3.4:93805645-93805664 | MS.gene067141:intron | 25.0% |
| ! | CTATAATAAAAGTTGGGAAT+GGG | - | chr3.4:93807738-93807757 | None:intergenic | 25.0% |
| ! | CTTGAATTTGATGTTGTATT+TGG | + | chr3.4:93807369-93807388 | MS.gene067141:intron | 25.0% |
| ! | CTTTCACTTTACATATGATA+GGG | + | chr3.4:93805585-93805604 | MS.gene067141:intron | 25.0% |
| ! | GACAAACTTTAGGTATAAAA+TGG | - | chr3.4:93804715-93804734 | None:intergenic | 25.0% |
| ! | GACAATAAATAACTAAGGTT+TGG | + | chr3.4:93805472-93805491 | MS.gene067141:intron | 25.0% |
| ! | GATAGTCATAGGATATATAA+AGG | - | chr3.4:93805936-93805955 | None:intergenic | 25.0% |
| ! | TATATATATATAACCGATGC+AGG | + | chr3.4:93808442-93808461 | MS.gene067141:intron | 25.0% |
| ! | TCTATAATAAAAGTTGGGAA+TGG | - | chr3.4:93807739-93807758 | None:intergenic | 25.0% |
| ! | TCTTTCACTTTACATATGAT+AGG | + | chr3.4:93805584-93805603 | MS.gene067141:intron | 25.0% |
| ! | TGAATATGTGATTATAAACG+GGG | + | chr3.4:93806766-93806785 | MS.gene067141:intron | 25.0% |
| ! | TTCAACAAAAACTATTAGTG+AGG | + | chr3.4:93806108-93806127 | MS.gene067141:CDS | 25.0% |
| ! | TTGATGAAGACGAATAATAA+TGG | + | chr3.4:93807665-93807684 | MS.gene067141:intron | 25.0% |
| !! | AATATTTTATGCAGGGATAA+TGG | + | chr3.4:93806936-93806955 | MS.gene067141:intron | 25.0% |
| !! | ACAATCGCAAAAAGTATAAA+AGG | - | chr3.4:93808956-93808975 | None:intergenic | 25.0% |
| !! | ATTGCAATAAGACGTTATTT+TGG | - | chr3.4:93808884-93808903 | None:intergenic | 25.0% |
| !! | CAATCGCAAAAAGTATAAAA+GGG | - | chr3.4:93808955-93808974 | None:intergenic | 25.0% |
| !! | GTCTGAAAAATATTTTATGC+AGG | + | chr3.4:93806928-93806947 | MS.gene067141:intron | 25.0% |
| !! | TCTAAAATTGAAGGAATTTG+TGG | + | chr3.4:93804811-93804830 | MS.gene067141:intron | 25.0% |
| !! | TGATATTTGTTACAGCTATA+TGG | - | chr3.4:93805320-93805339 | None:intergenic | 25.0% |
| !! | TTTATCATTTTGAATTGCTC+TGG | + | chr3.4:93805386-93805405 | MS.gene067141:intron | 25.0% |
| !! | TTTTCCAGATCTGAATTTTT+AGG | + | chr3.4:93807620-93807639 | MS.gene067141:intron | 25.0% |
| !! | TTTTCCCTTGATTACAATTA+GGG | - | chr3.4:93808754-93808773 | None:intergenic | 25.0% |
| !! | TTTTTCCCTTGATTACAATT+AGG | - | chr3.4:93808755-93808774 | None:intergenic | 25.0% |
| !!! | AACTTTAGCTTTTCATTTAC+AGG | - | chr3.4:93809177-93809196 | None:intergenic | 25.0% |
| !!! | ACTTTAGCTTTTCATTTACA+GGG | - | chr3.4:93809176-93809195 | None:intergenic | 25.0% |
| !!! | AGAATAAATTCTGGAATACT+GGG | + | chr3.4:93805654-93805673 | MS.gene067141:intron | 25.0% |
| !!! | ATGTTTTTGATATGCCTATT+CGG | + | chr3.4:93805160-93805179 | MS.gene067141:CDS | 25.0% |
| !!! | CAAGTTGATTCTTAGAATTT+GGG | - | chr3.4:93808188-93808207 | None:intergenic | 25.0% |
| !!! | CTATTTTGTCTCTAAAAATG+AGG | - | chr3.4:93808487-93808506 | None:intergenic | 25.0% |
| !!! | TAGAATAAATTCTGGAATAC+TGG | + | chr3.4:93805653-93805672 | MS.gene067141:intron | 25.0% |
| !!! | TCGTTATCTTCTGAAAATTT+TGG | + | chr3.4:93807269-93807288 | MS.gene067141:intron | 25.0% |
| !!! | TTTTTGAAACTGGAAAAATC+TGG | + | chr3.4:93807306-93807325 | MS.gene067141:intron | 25.0% |
| AAAATGATTGAGGATTTCCA+CGG | - | chr3.4:93805362-93805381 | None:intergenic | 30.0% | |
| AAAGACAATGAGAAAATCAG+AGG | - | chr3.4:93805770-93805789 | None:intergenic | 30.0% | |
| AAGAAGAAAGATGAGATTCA+TGG | - | chr3.4:93807123-93807142 | None:intergenic | 30.0% | |
| AAGACAATGAGAAAATCAGA+GGG | - | chr3.4:93805769-93805788 | None:intergenic | 30.0% | |
| AAGATTTATAGCATTTCCGT+TGG | - | chr3.4:93805284-93805303 | None:intergenic | 30.0% | |
| AATGCATTGTAGATGATCAT+TGG | - | chr3.4:93804644-93804663 | None:intergenic | 30.0% | |
| ACGGAAATGCTATAAATCTT+AGG | + | chr3.4:93805284-93805303 | MS.gene067141:intron | 30.0% | |
| ATGAGAAAGTAATTGGTGTA+TGG | + | chr3.4:93807881-93807900 | MS.gene067141:intron | 30.0% | |
| ATTAATTACCACCACTGAAT+GGG | - | chr3.4:93806257-93806276 | None:intergenic | 30.0% | |
| ATTCATGTACTACAGAATGA+TGG | - | chr3.4:93804579-93804598 | None:intergenic | 30.0% | |
| CATTCATATATCATCCAATC+TGG | - | chr3.4:93808097-93808116 | None:intergenic | 30.0% | |
| GAATAATCCAAATTGAAGAG+TGG | - | chr3.4:93807084-93807103 | None:intergenic | 30.0% | |
| GATTTATGTGACTTTGCTTA+AGG | + | chr3.4:93807328-93807347 | MS.gene067141:intron | 30.0% | |
| GTAACCCTAATTGTAATCAA+GGG | + | chr3.4:93808747-93808766 | MS.gene067141:intron | 30.0% | |
| TAAGAAAGAAGGCAATGATA+AGG | - | chr3.4:93806445-93806464 | None:intergenic | 30.0% | |
| TACAATTAGGGTTACATACA+TGG | - | chr3.4:93808742-93808761 | None:intergenic | 30.0% | |
| TATATAAAGGGAAAAGGAAG+TGG | - | chr3.4:93805923-93805942 | None:intergenic | 30.0% | |
| TATGTAGTGTGAATTTACTC+TGG | + | chr3.4:93806668-93806687 | MS.gene067141:intron | 30.0% | |
| TATTAATTACCACCACTGAA+TGG | - | chr3.4:93806258-93806277 | None:intergenic | 30.0% | |
| TCAAACTCAATAAGAAGGTT+CGG | + | chr3.4:93806347-93806366 | MS.gene067141:CDS | 30.0% | |
| TCAATGGATGAGAAAGTAAT+TGG | + | chr3.4:93807874-93807893 | MS.gene067141:intron | 30.0% | |
| TCATAGCATCTAGTAATAAG+AGG | + | chr3.4:93805958-93805977 | MS.gene067141:intron | 30.0% | |
| TCCAAAGTATGGTCAATAAA+GGG | + | chr3.4:93808679-93808698 | MS.gene067141:intron | 30.0% | |
| TCTTCCTAAAAATTCAGATC+TGG | - | chr3.4:93807627-93807646 | None:intergenic | 30.0% | |
| TGTAACCCTAATTGTAATCA+AGG | + | chr3.4:93808746-93808765 | MS.gene067141:intron | 30.0% | |
| TTACCTGCTACATTAAAAGA+AGG | + | chr3.4:93806899-93806918 | MS.gene067141:intron | 30.0% | |
| TTATAGACAATTTAAAGGCG+GGG | + | chr3.4:93807752-93807771 | MS.gene067141:intron | 30.0% | |
| TTGATTCTTAGAATTTGGGT+TGG | - | chr3.4:93808184-93808203 | None:intergenic | 30.0% | |
| TTTATGTGACTTTGCTTAAG+GGG | + | chr3.4:93807330-93807349 | MS.gene067141:intron | 30.0% | |
| ! | ACAAATTTGTGTTTTGTGCA+TGG | + | chr3.4:93807907-93807926 | MS.gene067141:intron | 30.0% |
| ! | ATGCTATGATTGATAGTCAT+AGG | - | chr3.4:93805947-93805966 | None:intergenic | 30.0% |
| ! | CAGATATGAACATTTTCTTG+TGG | + | chr3.4:93807591-93807610 | MS.gene067141:intron | 30.0% |
| ! | CCTTACAAAACTAACTTGTA+AGG | - | chr3.4:93808150-93808169 | None:intergenic | 30.0% |
| ! | GCAGACAAACATTTAGATTT+TGG | + | chr3.4:93805450-93805469 | MS.gene067141:intron | 30.0% |
| ! | GTATTGATCGCATTATGATT+TGG | + | chr3.4:93805234-93805253 | MS.gene067141:intron | 30.0% |
| ! | TGATTCTTAGAATTTGGGTT+GGG | - | chr3.4:93808183-93808202 | None:intergenic | 30.0% |
| ! | TTAGCTATCAAATTTTCCTG+CGG | + | chr3.4:93806040-93806059 | MS.gene067141:intron | 30.0% |
| ! | TTTCCTTCTTTTAATGTAGC+AGG | - | chr3.4:93806905-93806924 | None:intergenic | 30.0% |
| ! | TTTTTGGACAATAAGTCAGA+TGG | - | chr3.4:93804511-93804530 | None:intergenic | 30.0% |
| !! | ATCTAGCTTTCAGCTAATAT+GGG | - | chr3.4:93806987-93807006 | None:intergenic | 30.0% |
| !! | GCAAGTTGATTCTTAGAATT+TGG | - | chr3.4:93808189-93808208 | None:intergenic | 30.0% |
| !! | GTGATCAACATATAATGGAT+TGG | + | chr3.4:93805982-93806001 | MS.gene067141:intron | 30.0% |
| !! | TAAAAAATTATAGTGGGTGG+AGG | - | chr3.4:93807425-93807444 | None:intergenic | 30.0% |
| !! | TATCTAGCTTTCAGCTAATA+TGG | - | chr3.4:93806988-93807007 | None:intergenic | 30.0% |
| !!! | CCTTACAAGTTAGTTTTGTA+AGG | + | chr3.4:93808147-93808166 | MS.gene067141:intron | 30.0% |
| !!! | GAATTTTTTCAATCAACTGG+AGG | + | chr3.4:93809119-93809138 | MS.gene067141:CDS | 30.0% |
| !!! | TAGTTTTGTAAGGTTGAGTT+AGG | + | chr3.4:93808157-93808176 | MS.gene067141:intron | 30.0% |
| AAAACTATTAGTGAGGTCAG+TGG | + | chr3.4:93806115-93806134 | MS.gene067141:CDS | 35.0% | |
| AAACTATTAGTGAGGTCAGT+GGG | + | chr3.4:93806116-93806135 | MS.gene067141:CDS | 35.0% | |
| AAACTTCTGATCGTAGATGA+CGG | + | chr3.4:93809150-93809169 | MS.gene067141:CDS | 35.0% | |
| AACTTTCACAACGAAGACAA+GGG | + | chr3.4:93805117-93805136 | MS.gene067141:CDS | 35.0% | |
| AAGAAAGATGAGATTCATGG+TGG | - | chr3.4:93807120-93807139 | None:intergenic | 35.0% | |
| AATGATAAGGAGAGTGATAG+AGG | - | chr3.4:93806432-93806451 | None:intergenic | 35.0% | |
| AATGGGAGGAGGAATAAAAT+GGG | - | chr3.4:93806240-93806259 | None:intergenic | 35.0% | |
| ACCCTTTATTGACCATACTT+TGG | - | chr3.4:93808683-93808702 | None:intergenic | 35.0% | |
| ACTACAGAATGATGGTTACT+AGG | - | chr3.4:93804571-93804590 | None:intergenic | 35.0% | |
| ACTTCGTTCTTATCAATCCT+TGG | + | chr3.4:93804272-93804291 | MS.gene067141:CDS | 35.0% | |
| ATAATGCGATCAATACCTGT+TGG | - | chr3.4:93805230-93805249 | None:intergenic | 35.0% | |
| ATCTACGATCAGAAGTTTCT+TGG | - | chr3.4:93809148-93809167 | None:intergenic | 35.0% | |
| CAATGTTAAGAGTCTCACAT+TGG | + | chr3.4:93806730-93806749 | MS.gene067141:intron | 35.0% | |
| CGCTTTCAAACTCAATAAGA+AGG | + | chr3.4:93806342-93806361 | MS.gene067141:CDS | 35.0% | |
| CTAACCCAACTATACAAAAC+CGG | - | chr3.4:93807944-93807963 | None:intergenic | 35.0% | |
| CTCCAAAGTATGGTCAATAA+AGG | + | chr3.4:93808678-93808697 | MS.gene067141:intron | 35.0% | |
| CTTCGTTCTTATCAATCCTT+GGG | + | chr3.4:93804273-93804292 | MS.gene067141:CDS | 35.0% | |
| CTTGAGTCTTGACAAACTTT+AGG | - | chr3.4:93804725-93804744 | None:intergenic | 35.0% | |
| GAATGCAATGTACCAAGATA+CGG | - | chr3.4:93804362-93804381 | None:intergenic | 35.0% | |
| TAAAGAATGTTCTGTACCTG+AGG | - | chr3.4:93806205-93806224 | None:intergenic | 35.0% | |
| TAACCCAACTATACAAAACC+GGG | - | chr3.4:93807943-93807962 | None:intergenic | 35.0% | |
| TAATCCAAATTGAAGAGTGG+AGG | - | chr3.4:93807081-93807100 | None:intergenic | 35.0% | |
| TAATGAATGGCAACAGTTCA+GGG | + | chr3.4:93806282-93806301 | MS.gene067141:intron | 35.0% | |
| TATACAGCTTCTAGTGTTTG+AGG | + | chr3.4:93809059-93809078 | MS.gene067141:intron | 35.0% | |
| TCATTGAACTCAAAGAAAGC+CGG | - | chr3.4:93808833-93808852 | None:intergenic | 35.0% | |
| TCTGTAGTACATGAATATGC+TGG | + | chr3.4:93804583-93804602 | MS.gene067141:intron | 35.0% | |
| TGAACTATATCCTTCCGAAT+AGG | - | chr3.4:93805177-93805196 | None:intergenic | 35.0% | |
| TGCTTAAGGGGTAATATGAA+TGG | + | chr3.4:93807342-93807361 | MS.gene067141:intron | 35.0% | |
| TGTATTCAATTGTTGAACCG+TGG | + | chr3.4:93805342-93805361 | MS.gene067141:intron | 35.0% | |
| TTAATGAATGGCAACAGTTC+AGG | + | chr3.4:93806281-93806300 | MS.gene067141:intron | 35.0% | |
| TTGCATGAGATAAAGCAGAA+AGG | - | chr3.4:93804613-93804632 | None:intergenic | 35.0% | |
| ! | ATAAGAACGAAGTAGCCTTT+TGG | - | chr3.4:93804265-93804284 | None:intergenic | 35.0% |
| ! | CAAAACTAACTTGTAAGGTG+AGG | - | chr3.4:93808145-93808164 | None:intergenic | 35.0% |
| ! | GCATTATGATTTGGAACCAT+TGG | + | chr3.4:93805243-93805262 | MS.gene067141:intron | 35.0% |
| ! | TTTTGATATGCCTATTCGGA+AGG | + | chr3.4:93805164-93805183 | MS.gene067141:CDS | 35.0% |
| !! | AACTCATCTAGTCTTGATCA+TGG | + | chr3.4:93804998-93805017 | MS.gene067141:intron | 35.0% |
| !! | ACTCATCTAGTCTTGATCAT+GGG | + | chr3.4:93804999-93805018 | MS.gene067141:intron | 35.0% |
| !! | AGTAGAAGTAGAAAAGCGTT+GGG | - | chr3.4:93804473-93804492 | None:intergenic | 35.0% |
| !! | TGCTTCTGCTCTAAAATTGA+AGG | + | chr3.4:93804802-93804821 | MS.gene067141:intron | 35.0% |
| !!! | AAAGTTCTTGGTTTTATGCG+TGG | - | chr3.4:93809097-93809116 | None:intergenic | 35.0% |
| !!! | AAGTTCTTGGTTTTATGCGT+GGG | - | chr3.4:93809096-93809115 | None:intergenic | 35.0% |
| !!! | CTCATTGATTTTTGCCAACA+GGG | + | chr3.4:93806079-93806098 | MS.gene067141:intron | 35.0% |
| !!! | TCTCATTGATTTTTGCCAAC+AGG | + | chr3.4:93806078-93806097 | MS.gene067141:intron | 35.0% |
| AAAACAAGTAACATAGCCGC+AGG | - | chr3.4:93806059-93806078 | None:intergenic | 40.0% | |
| AACCCAACTATACAAAACCG+GGG | - | chr3.4:93807942-93807961 | None:intergenic | 40.0% | |
| AAGACCCAAAAGTTAAACCC+TGG | - | chr3.4:93804837-93804856 | None:intergenic | 40.0% | |
| AATGAATGGCAACAGTTCAG+GGG | + | chr3.4:93806283-93806302 | MS.gene067141:intron | 40.0% | |
| AATGTGGTTCATTATGCTGC+AGG | + | chr3.4:93805063-93805082 | MS.gene067141:intron | 40.0% | |
| AATTGAAGGAATTTGTGGCC+AGG | + | chr3.4:93804816-93804835 | MS.gene067141:intron | 40.0% | |
| ACAATGAGAAAATCAGAGGG+CGG | - | chr3.4:93805766-93805785 | None:intergenic | 40.0% | |
| ACGCTTCAGATGTGAATCTT+GGG | + | chr3.4:93808046-93808065 | MS.gene067141:intron | 40.0% | |
| AGAAAGCCTTGGAACCAAAA+GGG | + | chr3.4:93806145-93806164 | MS.gene067141:CDS | 40.0% | |
| AGATGAGTTGCCATGATAGA+TGG | - | chr3.4:93804987-93805006 | None:intergenic | 40.0% | |
| ATAATCCTCACCTTACAAGC+CGG | + | chr3.4:93806789-93806808 | MS.gene067141:intron | 40.0% | |
| ATCCTTGATATGTGACAGCA+AGG | - | chr3.4:93805824-93805843 | None:intergenic | 40.0% | |
| ATGTGGTTCATTATGCTGCA+GGG | + | chr3.4:93805064-93805083 | MS.gene067141:intron | 40.0% | |
| ATTGAAGGAATTTGTGGCCA+GGG | + | chr3.4:93804817-93804836 | MS.gene067141:intron | 40.0% | |
| CAACTTTCACAACGAAGACA+AGG | + | chr3.4:93805116-93805135 | MS.gene067141:CDS | 40.0% | |
| CGACAGTTCAGATCAAAAGT+TGG | - | chr3.4:93807826-93807845 | None:intergenic | 40.0% | |
| CTTGTCTTCGTTGTGAAAGT+TGG | - | chr3.4:93805118-93805137 | None:intergenic | 40.0% | |
| GAATGGGAGGAGGAATAAAA+TGG | - | chr3.4:93806241-93806260 | None:intergenic | 40.0% | |
| GAGGCGTGATCAACATATAA+TGG | + | chr3.4:93805977-93805996 | MS.gene067141:intron | 40.0% | |
| GCTATCAAGTTTCCACAATC+AGG | + | chr3.4:93808021-93808040 | MS.gene067141:intron | 40.0% | |
| GCTTCTAGTGTTTGAGGATT+TGG | + | chr3.4:93809065-93809084 | MS.gene067141:intron | 40.0% | |
| GTTCTTATCAATCCTTGGGA+CGG | + | chr3.4:93804277-93804296 | MS.gene067141:CDS | 40.0% | |
| GTTTCAATAGCCTAAGGCTA+AGG | - | chr3.4:93807052-93807071 | None:intergenic | 40.0% | |
| TAATAGTTTACCAGCCAAGC+TGG | + | chr3.4:93806600-93806619 | MS.gene067141:intron | 40.0% | |
| TAGCTTTCAGCTAATATGGG+AGG | - | chr3.4:93806984-93807003 | None:intergenic | 40.0% | |
| TCCTTGATATGTGACAGCAA+GGG | - | chr3.4:93805823-93805842 | None:intergenic | 40.0% | |
| TCTAGTGTTTGAGGATTTGG+AGG | + | chr3.4:93809068-93809087 | MS.gene067141:CDS | 40.0% | |
| TGGCTTCTTTCATCTCCAAA+AGG | + | chr3.4:93804247-93804266 | MS.gene067141:CDS | 40.0% | |
| TGTTTGTGTACACTGATCTC+TGG | + | chr3.4:93809026-93809045 | MS.gene067141:intron | 40.0% | |
| TTGTAAATGCCACCCAAAAC+CGG | - | chr3.4:93806811-93806830 | None:intergenic | 40.0% | |
| TTGTTGAATGAGTTCCCTGT+TGG | - | chr3.4:93806096-93806115 | None:intergenic | 40.0% | |
| TTTAGAAGAACAGCCTGCAT+CGG | - | chr3.4:93808458-93808477 | None:intergenic | 40.0% | |
| ! | AGAATTGTGTAGAGAGGCAT+CGG | - | chr3.4:93805725-93805744 | None:intergenic | 40.0% |
| ! | ATGATTTGGAACCATTGGAC+TGG | + | chr3.4:93805248-93805267 | MS.gene067141:intron | 40.0% |
| ! | CAGTAGAAGTAGAAAAGCGT+TGG | - | chr3.4:93804474-93804493 | None:intergenic | 40.0% |
| ! | GATTGTGGAAACTTGATAGC+AGG | - | chr3.4:93808021-93808040 | None:intergenic | 40.0% |
| ! | GTCTTCACAGAATTGCTGTT+CGG | + | chr3.4:93808515-93808534 | MS.gene067141:intron | 40.0% |
| ! | TCATGGTGGTAATGCATAAC+TGG | - | chr3.4:93807106-93807125 | None:intergenic | 40.0% |
| ! | TGAGTTTGAAAGCGTGACTT+CGG | - | chr3.4:93806336-93806355 | None:intergenic | 40.0% |
| ! | TGATTTGGAACCATTGGACT+GGG | + | chr3.4:93805249-93805268 | MS.gene067141:intron | 40.0% |
| ! | TGTGAGAAAACCTTAGCCTT+AGG | + | chr3.4:93807039-93807058 | MS.gene067141:intron | 40.0% |
| !! | CGGTTTTGTATAGTTGGGTT+AGG | + | chr3.4:93807942-93807961 | MS.gene067141:intron | 40.0% |
| !! | TCGTTGTGAAAGTTGGTAAC+TGG | - | chr3.4:93805111-93805130 | None:intergenic | 40.0% |
| !!! | AAGGGCTTTATGGTTTTAGC+TGG | + | chr3.4:93805135-93805154 | MS.gene067141:CDS | 40.0% |
| !!! | GGGGTCACTATTTTTGTTGT+TGG | + | chr3.4:93807771-93807790 | MS.gene067141:intron | 40.0% |
| !!! | TAGTTCACCGTGTTGTTTTG+TGG | + | chr3.4:93805190-93805209 | MS.gene067141:CDS | 40.0% |
| AAAAGGACGTGGTACTGTTC+TGG | + | chr3.4:93807560-93807579 | MS.gene067141:intron | 45.0% | |
| AACTCAAAGAAAGCCGGCAA+AGG | - | chr3.4:93808827-93808846 | None:intergenic | 45.0% | |
| AATAAGAAGGTTCGGCGACT+GGG | + | chr3.4:93806355-93806374 | MS.gene067141:CDS | 45.0% | |
| AATTACCACCACTGAATGGG+AGG | - | chr3.4:93806254-93806273 | None:intergenic | 45.0% | |
| AATTGTCTGTGAGGATGGAG+TGG | + | chr3.4:93805410-93805429 | MS.gene067141:intron | 45.0% | |
| ACATCCAGAGCTCCAAAGTA+TGG | + | chr3.4:93808668-93808687 | MS.gene067141:intron | 45.0% | |
| CAACGAAGACAAGGGCTTTA+TGG | + | chr3.4:93805125-93805144 | MS.gene067141:CDS | 45.0% | |
| CACGCTTCAGATGTGAATCT+TGG | + | chr3.4:93808045-93808064 | MS.gene067141:intron | 45.0% | |
| CATTTCTGCTCACCGTATCT+TGG | + | chr3.4:93804347-93804366 | MS.gene067141:CDS | 45.0% | |
| CGTGTGGTTTCAATAGCCTA+AGG | - | chr3.4:93807058-93807077 | None:intergenic | 45.0% | |
| CTCTGGATGTGCATTTAGTG+GGG | - | chr3.4:93808658-93808677 | None:intergenic | 45.0% | |
| CTCTTAACACACACACACTC+AGG | - | chr3.4:93808072-93808091 | None:intergenic | 45.0% | |
| GACTGGGACATGTAATCCAA+CGG | + | chr3.4:93805265-93805284 | MS.gene067141:intron | 45.0% | |
| GAGAAAGCCTTGGAACCAAA+AGG | + | chr3.4:93806144-93806163 | MS.gene067141:CDS | 45.0% | |
| GATGCAGGCTGTTCTTCTAA+AGG | + | chr3.4:93808457-93808476 | MS.gene067141:intron | 45.0% | |
| GATTACATGTCCCAGTCCAA+TGG | - | chr3.4:93805262-93805281 | None:intergenic | 45.0% | |
| GCAACATCTGAGCGTGATAT+AGG | + | chr3.4:93804538-93804557 | MS.gene067141:CDS | 45.0% | |
| GCAGGTAGAATTGTGTAGAG+AGG | - | chr3.4:93805731-93805750 | None:intergenic | 45.0% | |
| GTGTGTTAAGAGTCCCAGAT+TGG | + | chr3.4:93808080-93808099 | MS.gene067141:intron | 45.0% | |
| TAGCCTATCCTAGAACCGTT+AGG | + | chr3.4:93807992-93808011 | MS.gene067141:intron | 45.0% | |
| TATTGTGTCTCTTGCCAGCT+TGG | - | chr3.4:93806617-93806636 | None:intergenic | 45.0% | |
| TCAAGTGAGCAAGAGAAGTG+AGG | - | chr3.4:93805892-93805911 | None:intergenic | 45.0% | |
| TCGGTAGGGAGAATTGAAGT+AGG | + | chr3.4:93808534-93808553 | MS.gene067141:intron | 45.0% | |
| TCTGGATGTGCATTTAGTGG+GGG | - | chr3.4:93808657-93808676 | None:intergenic | 45.0% | |
| TGAGTTGCCATGATAGATGG+TGG | - | chr3.4:93804984-93805003 | None:intergenic | 45.0% | |
| TTATTCCTCCTCCCATTCAG+TGG | + | chr3.4:93806243-93806262 | MS.gene067141:intron | 45.0% | |
| ! | AGATGTTGCGAGAGGCTTTT+TGG | - | chr3.4:93804527-93804546 | None:intergenic | 45.0% |
| ! | AGTTTGAAAGCGTGACTTCG+GGG | - | chr3.4:93806334-93806353 | None:intergenic | 45.0% |
| ! | CACAGAATTGCTGTTCGGTA+GGG | + | chr3.4:93808520-93808539 | MS.gene067141:intron | 45.0% |
| ! | GAGTTTGAAAGCGTGACTTC+GGG | - | chr3.4:93806335-93806354 | None:intergenic | 45.0% |
| ! | GCTCTGGATGTGCATTTAGT+GGG | - | chr3.4:93808659-93808678 | None:intergenic | 45.0% |
| ! | TCACAGAATTGCTGTTCGGT+AGG | + | chr3.4:93808519-93808538 | MS.gene067141:intron | 45.0% |
| ! | TCCCTTGCTGTCACATATCA+AGG | + | chr3.4:93805819-93805838 | MS.gene067141:intron | 45.0% |
| ! | TGTGGAAACTTGATAGCAGG+TGG | - | chr3.4:93808018-93808037 | None:intergenic | 45.0% |
| ! | TTGCCATGATAGATGGTGGT+AGG | - | chr3.4:93804980-93804999 | None:intergenic | 45.0% |
| !! | AAAGCGTTGGGTGATTGATC+CGG | - | chr3.4:93804461-93804480 | None:intergenic | 45.0% |
| !! | AGCTCTGGATGTGCATTTAG+TGG | - | chr3.4:93808660-93808679 | None:intergenic | 45.0% |
| !! | CACCCCGGTTTTGTATAGTT+GGG | + | chr3.4:93807937-93807956 | MS.gene067141:intron | 45.0% |
| !! | GAATTGTGTAGAGAGGCATC+GGG | - | chr3.4:93805724-93805743 | None:intergenic | 45.0% |
| !! | GTGGCCAGGGTTTAACTTTT+GGG | + | chr3.4:93804830-93804849 | MS.gene067141:intron | 45.0% |
| !! | TCACCTTACAAGCCGGTTTT+GGG | + | chr3.4:93806796-93806815 | MS.gene067141:intron | 45.0% |
| !! | TGTGGCCAGGGTTTAACTTT+TGG | + | chr3.4:93804829-93804848 | MS.gene067141:intron | 45.0% |
| !! | TTGACCATACTTTGGAGCTC+TGG | - | chr3.4:93808675-93808694 | None:intergenic | 45.0% |
| !! | ATATAATAATAATATATCAA+TGG | + | chr3.4:93807848-93807867 | MS.gene067141:intron | 5.0% |
| !! | ATTTAAATAAATAAAACAAA+CGG | - | chr3.4:93804433-93804452 | None:intergenic | 5.0% |
| !! | TAATTAATAAATTTAATGAA+TGG | + | chr3.4:93806269-93806288 | MS.gene067141:intron | 5.0% |
| !! | TAATTGTAAATATTAAAAAA+AGG | + | chr3.4:93807543-93807562 | MS.gene067141:intron | 5.0% |
| AAAAGGGAACTGGTCGAGCA+AGG | + | chr3.4:93806161-93806180 | MS.gene067141:CDS | 50.0% | |
| AAAGGACAGCAGATGCAGTG+CGG | - | chr3.4:93808809-93808828 | None:intergenic | 50.0% | |
| ACAGCAAGGGAAGAAGAGTG+AGG | - | chr3.4:93805810-93805829 | None:intergenic | 50.0% | |
| ATTAGTGAGGTCAGTGGGAC+TGG | + | chr3.4:93806121-93806140 | MS.gene067141:CDS | 50.0% | |
| CAATAAGAAGGTTCGGCGAC+TGG | + | chr3.4:93806354-93806373 | MS.gene067141:CDS | 50.0% | |
| CACGCCTCCACTCTTCAATT+TGG | + | chr3.4:93807074-93807093 | MS.gene067141:intron | 50.0% | |
| CACGCTGCCACAAAACAACA+CGG | - | chr3.4:93805200-93805219 | None:intergenic | 50.0% | |
| CCAACTATACAAAACCGGGG+TGG | - | chr3.4:93807939-93807958 | None:intergenic | 50.0% | |
| CCATATAACCCAGCAGCACT+GGG | - | chr3.4:93804318-93804337 | None:intergenic | 50.0% | |
| CCTTGGAACCAAAAGGGAAC+TGG | + | chr3.4:93806151-93806170 | MS.gene067141:CDS | 50.0% | |
| CTGCCTACCACCATCTATCA+TGG | + | chr3.4:93804974-93804993 | MS.gene067141:intron | 50.0% | |
| CTGGCAATTGTCTGTGAGGA+TGG | + | chr3.4:93805405-93805424 | MS.gene067141:intron | 50.0% | |
| GGAGGAGGAATAAAATGGGC+TGG | - | chr3.4:93806236-93806255 | None:intergenic | 50.0% | |
| TGCTCTGGCAATTGTCTGTG+AGG | + | chr3.4:93805401-93805420 | MS.gene067141:intron | 50.0% | |
| TGTGAGGATGGAGTGGAGTA+GGG | + | chr3.4:93805417-93805436 | MS.gene067141:intron | 50.0% | |
| TTAGTGAGGTCAGTGGGACT+GGG | + | chr3.4:93806122-93806141 | MS.gene067141:CDS | 50.0% | |
| TTTGATTCACCCAGTGCTGC+TGG | + | chr3.4:93804306-93804325 | MS.gene067141:CDS | 50.0% | |
| ! | AATTGAAGAGTGGAGGCGTG+TGG | - | chr3.4:93807074-93807093 | None:intergenic | 50.0% |
| ! | CAGTGCTGCTGGGTTATATG+GGG | + | chr3.4:93804317-93804336 | MS.gene067141:CDS | 50.0% |
| ! | CCAGTGCTGCTGGGTTATAT+GGG | + | chr3.4:93804316-93804335 | MS.gene067141:CDS | 50.0% |
| ! | CTTGATAGCAGGTGGCCTAA+CGG | - | chr3.4:93808010-93808029 | None:intergenic | 50.0% |
| ! | TCTGAAGCGTGACCTGATTG+TGG | - | chr3.4:93808036-93808055 | None:intergenic | 50.0% |
| ! | TTGATTCACCCAGTGCTGCT+GGG | + | chr3.4:93804307-93804326 | MS.gene067141:CDS | 50.0% |
| ! | TTGCTCGACCAGTTCCCTTT+TGG | - | chr3.4:93806162-93806181 | None:intergenic | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr3.4:93806797-93806816 | None:intergenic | 50.0% |
| !! | CCACCCCGGTTTTGTATAGT+TGG | + | chr3.4:93807936-93807955 | MS.gene067141:intron | 50.0% |
| !! | CTCACCTTACAAGCCGGTTT+TGG | + | chr3.4:93806795-93806814 | MS.gene067141:intron | 50.0% |
| !! | TGGCCTAACGGTTCTAGGAT+AGG | - | chr3.4:93807998-93808017 | None:intergenic | 50.0% |
| !!! | CCAGTTCCCTTTTGGTTCCA+AGG | - | chr3.4:93806154-93806173 | None:intergenic | 50.0% |
| AAAGCGTGACTTCGGGGCTT+AGG | - | chr3.4:93806328-93806347 | None:intergenic | 55.0% | |
| AAGGACAGCAGATGCAGTGC+GGG | - | chr3.4:93808808-93808827 | None:intergenic | 55.0% | |
| AGCTCGTGCAGCAGAAGGAA+AGG | + | chr3.4:93806396-93806415 | MS.gene067141:CDS | 55.0% | |
| AGGACGTGGTACTGTTCTGG+TGG | + | chr3.4:93807563-93807582 | MS.gene067141:intron | 55.0% | |
| ATGGAGTGGAGTAGGGGGTT+GGG | + | chr3.4:93805424-93805443 | MS.gene067141:intron | 55.0% | |
| CAAGGCATGGGTCATTGCGT+GGG | + | chr3.4:93806179-93806198 | MS.gene067141:CDS | 55.0% | |
| CCCATATAACCCAGCAGCAC+TGG | - | chr3.4:93804319-93804338 | None:intergenic | 55.0% | |
| CTGCATCTGCTGTCCTTTGC+CGG | + | chr3.4:93808811-93808830 | MS.gene067141:intron | 55.0% | |
| CTGTGAGGATGGAGTGGAGT+AGG | + | chr3.4:93805416-93805435 | MS.gene067141:intron | 55.0% | |
| GAACTGGTCGAGCAAGGCAT+GGG | + | chr3.4:93806167-93806186 | MS.gene067141:CDS | 55.0% | |
| GAATGGCAACAGTTCAGGGG+TGG | + | chr3.4:93806286-93806305 | MS.gene067141:intron | 55.0% | |
| GTGAGGATGGAGTGGAGTAG+GGG | + | chr3.4:93805418-93805437 | MS.gene067141:intron | 55.0% | |
| GTGCATGGTAAATGCCACCC+CGG | + | chr3.4:93807922-93807941 | MS.gene067141:intron | 55.0% | |
| TACCACCACTGAATGGGAGG+AGG | - | chr3.4:93806251-93806270 | None:intergenic | 55.0% | |
| TCACGCTCAGATGTTGCGAG+AGG | - | chr3.4:93804535-93804554 | None:intergenic | 55.0% | |
| TGAGGATGGAGTGGAGTAGG+GGG | + | chr3.4:93805419-93805438 | MS.gene067141:intron | 55.0% | |
| TTATGCTGCAGGGCTCTGTC+AGG | + | chr3.4:93805074-93805093 | MS.gene067141:intron | 55.0% | |
| TTCCTCCTCCCATTCAGTGG+TGG | + | chr3.4:93806246-93806265 | MS.gene067141:intron | 55.0% | |
| ! | CCCAGTGCTGCTGGGTTATA+TGG | + | chr3.4:93804315-93804334 | MS.gene067141:CDS | 55.0% |
| !! | CCACCCAAAACCGGCTTGTA+AGG | - | chr3.4:93806802-93806821 | None:intergenic | 55.0% |
| !! | GTGTAGAGAGGCATCGGGTA+GGG | - | chr3.4:93805719-93805738 | None:intergenic | 55.0% |
| !! | TGTGTAGAGAGGCATCGGGT+AGG | - | chr3.4:93805720-93805739 | None:intergenic | 55.0% |
| !!! | CCTTACAAGCCGGTTTTGGG+TGG | + | chr3.4:93806799-93806818 | MS.gene067141:intron | 55.0% |
| AGGGGTGGTGAAGCGAAGCA+TGG | + | chr3.4:93806301-93806320 | MS.gene067141:CDS | 60.0% | |
| ATCAAAGCAGCGCCGTCCCA+AGG | - | chr3.4:93804292-93804311 | None:intergenic | 60.0% | |
| CAGAGGGCGGAAAAGACGCA+AGG | - | chr3.4:93805753-93805772 | None:intergenic | 60.0% | |
| CTGTCAGCTCGTGCAGCAGA+AGG | + | chr3.4:93806391-93806410 | MS.gene067141:CDS | 60.0% | |
| GATGGAGTGGAGTAGGGGGT+TGG | + | chr3.4:93805423-93805442 | MS.gene067141:intron | 60.0% | |
| GCAAGGCATGGGTCATTGCG+TGG | + | chr3.4:93806178-93806197 | MS.gene067141:CDS | 60.0% | |
| GCAGCGTGCAAAACGCCAAC+AGG | + | chr3.4:93805212-93805231 | MS.gene067141:CDS | 60.0% | |
| GCAGGTGGCCTAACGGTTCT+AGG | - | chr3.4:93808003-93808022 | None:intergenic | 60.0% | |
| GGAACTGGTCGAGCAAGGCA+TGG | + | chr3.4:93806166-93806185 | MS.gene067141:CDS | 60.0% | |
| GTGGGACTGGGAGAAAGCCT+TGG | + | chr3.4:93806134-93806153 | MS.gene067141:CDS | 60.0% | |
| GTGTCTCTTGCCAGCTTGGC+TGG | - | chr3.4:93806613-93806632 | None:intergenic | 60.0% | |
| !! | AGAGAGGCATCGGGTAGGGT+TGG | - | chr3.4:93805715-93805734 | None:intergenic | 60.0% |
| GGGCGGAAAAGACGCAAGGC+AGG | - | chr3.4:93805749-93805768 | None:intergenic | 65.0% | |
| TGGGTCATTGCGTGGGCCTC+AGG | + | chr3.4:93806186-93806205 | MS.gene067141:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 93804246 | 93809239 | 93804246 | ID=MS.gene067141 |
| chr3.4 | mRNA | 93804246 | 93809239 | 93804246 | ID=MS.gene067141.t1;Parent=MS.gene067141 |
| chr3.4 | exon | 93804246 | 93804368 | 93804246 | ID=MS.gene067141.t1.exon1;Parent=MS.gene067141.t1 |
| chr3.4 | CDS | 93804246 | 93804368 | 93804246 | ID=cds.MS.gene067141.t1;Parent=MS.gene067141.t1 |
| chr3.4 | exon | 93804457 | 93804559 | 93804457 | ID=MS.gene067141.t1.exon2;Parent=MS.gene067141.t1 |
| chr3.4 | CDS | 93804457 | 93804559 | 93804457 | ID=cds.MS.gene067141.t1;Parent=MS.gene067141.t1 |
| chr3.4 | exon | 93805085 | 93805233 | 93805085 | ID=MS.gene067141.t1.exon3;Parent=MS.gene067141.t1 |
| chr3.4 | CDS | 93805085 | 93805233 | 93805085 | ID=cds.MS.gene067141.t1;Parent=MS.gene067141.t1 |
| chr3.4 | exon | 93806100 | 93806207 | 93806100 | ID=MS.gene067141.t1.exon4;Parent=MS.gene067141.t1 |
| chr3.4 | CDS | 93806100 | 93806207 | 93806100 | ID=cds.MS.gene067141.t1;Parent=MS.gene067141.t1 |
| chr3.4 | exon | 93806298 | 93806417 | 93806298 | ID=MS.gene067141.t1.exon5;Parent=MS.gene067141.t1 |
| chr3.4 | CDS | 93806298 | 93806417 | 93806298 | ID=cds.MS.gene067141.t1;Parent=MS.gene067141.t1 |
| chr3.4 | exon | 93809066 | 93809239 | 93809066 | ID=MS.gene067141.t1.exon6;Parent=MS.gene067141.t1 |
| chr3.4 | CDS | 93809066 | 93809239 | 93809066 | ID=cds.MS.gene067141.t1;Parent=MS.gene067141.t1 |
| Gene Sequence |
| Protein sequence |
