Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067468.t1 | XP_013465595.1 | 97.4 | 342 | 8 | 1 | 1 | 341 | 1 | 342 | 3.60E-187 | 664.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067468.t1 | Q9S9N9 | 77.4 | 318 | 72 | 0 | 12 | 329 | 6 | 323 | 8.4e-145 | 514.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067468.t1 | A0A072VDF2 | 97.4 | 342 | 8 | 1 | 1 | 341 | 1 | 342 | 2.6e-187 | 664.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene012993 | MS.gene067468 | PPI |
MS.gene054632 | MS.gene067468 | PPI |
MS.gene38726 | MS.gene067468 | PPI |
MS.gene48491 | MS.gene067468 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067468.t1 | MTR_2g104960 | 97.368 | 342 | 8 | 1 | 1 | 341 | 1 | 342 | 0.0 | 683 |
MS.gene067468.t1 | MTR_4g006940 | 80.781 | 333 | 61 | 2 | 7 | 336 | 3 | 335 | 0.0 | 545 |
MS.gene067468.t1 | MTR_4g006940 | 81.655 | 278 | 49 | 1 | 7 | 282 | 3 | 280 | 1.79e-163 | 457 |
MS.gene067468.t1 | MTR_4g006940 | 81.655 | 278 | 49 | 1 | 7 | 282 | 3 | 280 | 1.79e-163 | 457 |
MS.gene067468.t1 | MTR_3g005210 | 46.605 | 324 | 164 | 6 | 14 | 330 | 1 | 322 | 2.76e-99 | 296 |
MS.gene067468.t1 | MTR_3g005170 | 48.137 | 322 | 158 | 6 | 11 | 325 | 2 | 321 | 4.81e-99 | 296 |
MS.gene067468.t1 | MTR_4g009040 | 46.708 | 319 | 161 | 3 | 15 | 328 | 9 | 323 | 1.67e-95 | 286 |
MS.gene067468.t1 | MTR_5g072620 | 45.141 | 319 | 168 | 3 | 17 | 329 | 3 | 320 | 3.18e-95 | 286 |
MS.gene067468.t1 | MTR_4g009040 | 46.130 | 323 | 161 | 3 | 15 | 328 | 9 | 327 | 8.07e-95 | 285 |
MS.gene067468.t1 | MTR_4g077100 | 47.319 | 317 | 158 | 6 | 16 | 325 | 8 | 322 | 9.53e-93 | 280 |
MS.gene067468.t1 | MTR_4g077130 | 46.417 | 321 | 163 | 7 | 12 | 325 | 2 | 320 | 2.11e-91 | 276 |
MS.gene067468.t1 | MTR_8g062440 | 45.652 | 322 | 165 | 7 | 16 | 330 | 5 | 323 | 6.04e-89 | 270 |
MS.gene067468.t1 | MTR_4g009690 | 47.022 | 319 | 160 | 3 | 15 | 328 | 9 | 323 | 2.91e-88 | 268 |
MS.gene067468.t1 | MTR_4g009690 | 47.335 | 319 | 158 | 4 | 15 | 328 | 9 | 322 | 1.02e-87 | 267 |
MS.gene067468.t1 | MTR_8g062440 | 45.511 | 323 | 165 | 8 | 16 | 330 | 5 | 324 | 5.75e-87 | 265 |
MS.gene067468.t1 | MTR_3g005170 | 48.746 | 279 | 135 | 5 | 11 | 282 | 2 | 279 | 6.74e-87 | 263 |
MS.gene067468.t1 | MTR_3g031650 | 43.354 | 316 | 172 | 3 | 17 | 326 | 3 | 317 | 9.32e-87 | 264 |
MS.gene067468.t1 | MTR_8g062110 | 45.741 | 317 | 162 | 6 | 16 | 325 | 15 | 328 | 1.42e-86 | 264 |
MS.gene067468.t1 | MTR_8g062110 | 45.741 | 317 | 162 | 6 | 16 | 325 | 6 | 319 | 1.48e-86 | 264 |
MS.gene067468.t1 | MTR_5g056600 | 43.711 | 318 | 169 | 7 | 19 | 328 | 4 | 319 | 3.50e-86 | 263 |
MS.gene067468.t1 | MTR_3g005170 | 44.025 | 318 | 146 | 6 | 11 | 325 | 2 | 290 | 8.13e-84 | 256 |
MS.gene067468.t1 | MTR_4g077100 | 48.540 | 274 | 133 | 5 | 16 | 282 | 8 | 280 | 1.52e-81 | 249 |
MS.gene067468.t1 | MTR_1g022440 | 41.846 | 325 | 171 | 12 | 17 | 328 | 6 | 325 | 6.71e-79 | 244 |
MS.gene067468.t1 | MTR_3g031650 | 44.981 | 269 | 142 | 2 | 17 | 279 | 3 | 271 | 2.36e-78 | 241 |
MS.gene067468.t1 | MTR_8g062440 | 47.826 | 276 | 135 | 6 | 16 | 284 | 5 | 278 | 1.55e-77 | 241 |
MS.gene067468.t1 | MTR_2g028620 | 41.925 | 322 | 174 | 6 | 17 | 328 | 8 | 326 | 2.36e-77 | 240 |
MS.gene067468.t1 | MTR_8g062110 | 47.080 | 274 | 136 | 5 | 16 | 282 | 6 | 277 | 1.22e-76 | 237 |
MS.gene067468.t1 | MTR_2g101330 | 40.439 | 319 | 179 | 5 | 19 | 329 | 5 | 320 | 1.28e-76 | 238 |
MS.gene067468.t1 | MTR_8g062110 | 47.080 | 274 | 136 | 5 | 16 | 282 | 6 | 277 | 1.37e-76 | 237 |
MS.gene067468.t1 | MTR_1g022445 | 41.667 | 324 | 175 | 10 | 16 | 328 | 5 | 325 | 5.84e-76 | 237 |
MS.gene067468.t1 | MTR_2g028620 | 43.223 | 273 | 143 | 5 | 17 | 279 | 8 | 278 | 2.71e-67 | 214 |
MS.gene067468.t1 | MTR_4g092080 | 36.391 | 338 | 194 | 10 | 7 | 326 | 2 | 336 | 9.22e-57 | 187 |
MS.gene067468.t1 | MTR_7g074730 | 36.615 | 325 | 187 | 13 | 19 | 328 | 8 | 328 | 3.29e-56 | 186 |
MS.gene067468.t1 | MTR_7g074880 | 34.769 | 325 | 191 | 11 | 19 | 328 | 8 | 326 | 5.55e-56 | 185 |
MS.gene067468.t1 | MTR_7g074820 | 36.810 | 326 | 186 | 13 | 19 | 328 | 8 | 329 | 4.89e-55 | 183 |
MS.gene067468.t1 | MTR_4g081440 | 35.821 | 335 | 184 | 11 | 20 | 328 | 25 | 354 | 9.68e-52 | 175 |
MS.gene067468.t1 | MTR_4g081440 | 35.329 | 334 | 186 | 10 | 20 | 328 | 21 | 349 | 1.10e-51 | 175 |
MS.gene067468.t1 | MTR_7g074850 | 34.347 | 329 | 190 | 13 | 19 | 328 | 8 | 329 | 3.07e-51 | 173 |
MS.gene067468.t1 | MTR_8g062110 | 41.071 | 224 | 127 | 4 | 104 | 325 | 13 | 233 | 1.19e-49 | 166 |
MS.gene067468.t1 | MTR_7g074710 | 34.056 | 323 | 196 | 13 | 19 | 328 | 8 | 326 | 1.86e-46 | 160 |
MS.gene067468.t1 | MTR_4g023730 | 33.231 | 325 | 201 | 10 | 18 | 328 | 7 | 329 | 8.92e-44 | 154 |
MS.gene067468.t1 | MTR_5g029990 | 31.596 | 307 | 191 | 8 | 9 | 308 | 2 | 296 | 6.97e-42 | 147 |
MS.gene067468.t1 | MTR_7g074870 | 33.216 | 283 | 172 | 10 | 58 | 328 | 11 | 288 | 6.84e-40 | 142 |
MS.gene067468.t1 | MTR_8g062110 | 41.989 | 181 | 101 | 3 | 104 | 282 | 13 | 191 | 7.69e-40 | 139 |
MS.gene067468.t1 | MTR_6g406250 | 32.653 | 294 | 183 | 6 | 19 | 301 | 55 | 344 | 1.58e-39 | 143 |
MS.gene067468.t1 | MTR_0685s0030 | 43.750 | 160 | 88 | 2 | 166 | 325 | 2 | 159 | 4.63e-37 | 131 |
MS.gene067468.t1 | MTR_2g013250 | 30.117 | 342 | 202 | 11 | 19 | 330 | 7 | 341 | 1.67e-33 | 127 |
MS.gene067468.t1 | MTR_2g013230 | 28.947 | 342 | 206 | 11 | 19 | 330 | 8 | 342 | 9.13e-30 | 117 |
MS.gene067468.t1 | MTR_7g117190 | 29.560 | 318 | 191 | 12 | 19 | 308 | 7 | 319 | 1.10e-29 | 116 |
MS.gene067468.t1 | MTR_7g117190 | 30.450 | 289 | 171 | 11 | 19 | 279 | 7 | 293 | 3.72e-29 | 114 |
MS.gene067468.t1 | MTR_6g406250 | 33.173 | 208 | 126 | 5 | 19 | 215 | 55 | 260 | 3.08e-27 | 108 |
MS.gene067468.t1 | MTR_0164s0070 | 43.262 | 141 | 61 | 4 | 19 | 140 | 5 | 145 | 4.97e-27 | 106 |
MS.gene067468.t1 | MTR_0685s0030 | 45.299 | 117 | 63 | 1 | 166 | 282 | 2 | 117 | 4.53e-26 | 100 |
MS.gene067468.t1 | MTR_2g013260 | 28.571 | 322 | 188 | 11 | 19 | 308 | 8 | 319 | 8.25e-26 | 106 |
MS.gene067468.t1 | MTR_2g013260 | 29.054 | 296 | 171 | 10 | 19 | 282 | 8 | 296 | 3.37e-25 | 103 |
MS.gene067468.t1 | MTR_8g062710 | 46.067 | 89 | 34 | 2 | 19 | 103 | 20 | 98 | 7.00e-17 | 76.3 |
MS.gene067468.t1 | MTR_3g011130 | 38.889 | 108 | 63 | 3 | 110 | 214 | 35 | 142 | 2.63e-16 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067468.t1 | AT1G15950 | 77.358 | 318 | 72 | 0 | 12 | 329 | 6 | 323 | 1.53e-179 | 501 |
MS.gene067468.t1 | AT1G15950 | 77.358 | 318 | 72 | 0 | 12 | 329 | 6 | 323 | 1.53e-179 | 501 |
MS.gene067468.t1 | AT1G80820 | 72.393 | 326 | 90 | 0 | 14 | 339 | 3 | 328 | 2.10e-174 | 487 |
MS.gene067468.t1 | AT1G15950 | 77.524 | 307 | 69 | 0 | 12 | 318 | 6 | 312 | 5.49e-172 | 481 |
MS.gene067468.t1 | AT1G15950 | 79.336 | 271 | 56 | 0 | 12 | 282 | 6 | 276 | 6.34e-152 | 428 |
MS.gene067468.t1 | AT1G15950 | 78.545 | 275 | 59 | 0 | 12 | 286 | 6 | 280 | 8.23e-152 | 429 |
MS.gene067468.t1 | AT1G15950 | 79.259 | 270 | 56 | 0 | 12 | 281 | 6 | 275 | 4.40e-151 | 426 |
MS.gene067468.t1 | AT1G80820 | 75.093 | 269 | 67 | 0 | 14 | 282 | 3 | 271 | 6.27e-145 | 410 |
MS.gene067468.t1 | AT1G15950 | 80.444 | 225 | 44 | 0 | 105 | 329 | 1 | 225 | 8.04e-124 | 356 |
MS.gene067468.t1 | AT5G19440 | 48.916 | 323 | 156 | 6 | 11 | 326 | 2 | 322 | 1.40e-103 | 307 |
MS.gene067468.t1 | AT1G51410 | 46.319 | 326 | 166 | 6 | 12 | 330 | 2 | 325 | 1.08e-94 | 285 |
MS.gene067468.t1 | AT5G58490 | 46.082 | 319 | 165 | 3 | 17 | 329 | 7 | 324 | 1.84e-93 | 281 |
MS.gene067468.t1 | AT2G02400 | 43.614 | 321 | 172 | 4 | 14 | 328 | 1 | 318 | 1.42e-90 | 274 |
MS.gene067468.t1 | AT2G33590 | 47.910 | 311 | 152 | 5 | 19 | 323 | 9 | 315 | 2.69e-88 | 268 |
MS.gene067468.t1 | AT1G09510 | 45.768 | 319 | 160 | 7 | 16 | 325 | 5 | 319 | 1.64e-86 | 263 |
MS.gene067468.t1 | AT1G66800 | 47.205 | 322 | 147 | 10 | 16 | 325 | 5 | 315 | 1.02e-84 | 259 |
MS.gene067468.t1 | AT1G09490 | 43.925 | 321 | 169 | 7 | 16 | 328 | 5 | 322 | 1.06e-82 | 254 |
MS.gene067468.t1 | AT1G09480 | 43.827 | 324 | 165 | 8 | 16 | 328 | 5 | 322 | 2.23e-82 | 253 |
MS.gene067468.t1 | AT1G09480 | 43.827 | 324 | 165 | 8 | 16 | 328 | 52 | 369 | 4.86e-82 | 254 |
MS.gene067468.t1 | AT4G35420 | 42.767 | 318 | 172 | 7 | 19 | 329 | 8 | 322 | 5.69e-82 | 252 |
MS.gene067468.t1 | AT1G68540 | 42.271 | 317 | 173 | 5 | 21 | 328 | 6 | 321 | 1.36e-81 | 251 |
MS.gene067468.t1 | AT1G09500 | 43.034 | 323 | 166 | 8 | 16 | 325 | 5 | 322 | 5.79e-77 | 239 |
MS.gene067468.t1 | AT1G76470 | 41.875 | 320 | 176 | 3 | 17 | 328 | 5 | 322 | 5.79e-75 | 234 |
MS.gene067468.t1 | AT1G25460 | 40.317 | 315 | 180 | 4 | 21 | 328 | 6 | 319 | 4.02e-74 | 232 |
MS.gene067468.t1 | AT2G33600 | 44.695 | 311 | 162 | 5 | 19 | 323 | 9 | 315 | 1.34e-72 | 228 |
MS.gene067468.t1 | AT1G09500 | 45.290 | 276 | 134 | 7 | 16 | 279 | 5 | 275 | 3.77e-72 | 225 |
MS.gene067468.t1 | AT5G42800 | 40.923 | 325 | 178 | 11 | 17 | 330 | 6 | 327 | 1.26e-70 | 225 |
MS.gene067468.t1 | AT1G09490 | 41.404 | 285 | 157 | 6 | 51 | 328 | 10 | 291 | 1.07e-64 | 207 |
MS.gene067468.t1 | AT1G09500 | 40.767 | 287 | 153 | 7 | 51 | 325 | 7 | 288 | 1.24e-58 | 191 |
MS.gene067468.t1 | AT2G45400 | 36.086 | 327 | 190 | 10 | 19 | 328 | 40 | 364 | 8.43e-54 | 181 |
MS.gene067468.t1 | AT4G27250 | 36.164 | 318 | 172 | 10 | 18 | 308 | 12 | 325 | 3.20e-53 | 179 |
MS.gene067468.t1 | AT4G27250 | 36.452 | 310 | 172 | 10 | 18 | 308 | 12 | 315 | 7.17e-52 | 175 |
MS.gene067468.t1 | AT2G45400 | 37.050 | 278 | 160 | 7 | 19 | 281 | 40 | 317 | 1.70e-49 | 168 |
MS.gene067468.t1 | AT1G68540 | 38.389 | 211 | 128 | 2 | 119 | 328 | 5 | 214 | 1.84e-48 | 162 |
MS.gene067468.t1 | AT2G23910 | 34.448 | 299 | 170 | 8 | 20 | 304 | 11 | 297 | 1.87e-48 | 165 |
MS.gene067468.t1 | AT2G23910 | 34.783 | 276 | 155 | 7 | 20 | 282 | 11 | 274 | 1.92e-47 | 161 |
MS.gene067468.t1 | AT1G61720 | 31.385 | 325 | 202 | 10 | 20 | 326 | 14 | 335 | 2.23e-47 | 163 |
MS.gene067468.t1 | AT2G23910 | 35.636 | 275 | 149 | 7 | 20 | 278 | 11 | 273 | 2.35e-47 | 161 |
MS.gene067468.t1 | AT4G30470 | 33.333 | 297 | 185 | 6 | 15 | 304 | 6 | 296 | 3.90e-43 | 151 |
MS.gene067468.t1 | AT2G23910 | 35.000 | 260 | 144 | 7 | 58 | 304 | 16 | 263 | 1.66e-40 | 143 |
MS.gene067468.t1 | AT2G45400 | 34.084 | 311 | 186 | 10 | 33 | 328 | 1 | 307 | 7.12e-40 | 143 |
MS.gene067468.t1 | AT5G14700 | 33.333 | 309 | 176 | 11 | 19 | 304 | 55 | 356 | 2.63e-37 | 137 |
MS.gene067468.t1 | AT2G45400 | 36.574 | 216 | 123 | 6 | 19 | 220 | 40 | 255 | 3.22e-33 | 124 |
MS.gene067468.t1 | AT5G14700 | 35.455 | 220 | 122 | 7 | 19 | 223 | 55 | 269 | 2.12e-28 | 112 |
MS.gene067468.t1 | AT4G33360 | 28.455 | 246 | 149 | 8 | 19 | 255 | 15 | 242 | 1.09e-18 | 85.5 |
MS.gene067468.t1 | AT4G33360 | 28.455 | 246 | 149 | 8 | 19 | 255 | 3 | 230 | 1.29e-18 | 85.9 |
MS.gene067468.t1 | AT4G33360 | 28.455 | 246 | 149 | 8 | 19 | 255 | 15 | 242 | 1.43e-18 | 85.9 |
Find 83 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGGTGGCTTCATCGCTTCT+TGG | 0.240471 | 2.4:-716094 | MS.gene067468:CDS |
GCAGAATCTTCCTCAATTTC+CGG | 0.262911 | 2.4:-716140 | MS.gene067468:CDS |
CTCAACATCAACACTCCTAT+TGG | 0.285572 | 2.4:+714364 | None:intergenic |
TATGAGAAACCTTCTGCTTC+TGG | 0.292884 | 2.4:-713544 | MS.gene067468:CDS |
GTGACTTACTTGGTAGGAAT+TGG | 0.293032 | 2.4:+713445 | None:intergenic |
ATCAATTGGCGCAGTCTATA+TGG | 0.300091 | 2.4:-714390 | MS.gene067468:CDS |
CACAAGCTTATGTTCATGTT+AGG | 0.302408 | 2.4:-713594 | MS.gene067468:CDS |
TCTAGAGAATCTTCTTTGTT+TGG | 0.306818 | 2.4:+712421 | None:intergenic |
TCCATTAACGGCTTCTTTAA+CGG | 0.328595 | 2.4:+715583 | None:intergenic |
TCCGTTAAAGAAGCCGTTAA+TGG | 0.331782 | 2.4:-715584 | MS.gene067468:CDS |
TCAACATCAACACTCCTATT+GGG | 0.340370 | 2.4:+714365 | None:intergenic |
TTCTTTGCTCCATTCACTGC+TGG | 0.349124 | 2.4:+714464 | None:intergenic |
ATTGTGCTTGCATTGATTGT+AGG | 0.355496 | 2.4:+713667 | None:intergenic |
AGTTGTAGTGAATCCAGTTT+TGG | 0.358005 | 2.4:-713710 | MS.gene067468:CDS |
AAAGGTGACCTTGGTCTTGT+AGG | 0.380163 | 2.4:+712449 | None:intergenic |
TTGAGGTTGATGAGTCTTGC+TGG | 0.381677 | 2.4:-714346 | MS.gene067468:CDS |
TGAGTCTTGCTGGAGTGATT+TGG | 0.392451 | 2.4:-714336 | MS.gene067468:CDS |
GAGAAAGGCTATACTGTTAG+AGG | 0.399644 | 2.4:-716053 | MS.gene067468:CDS |
TTGGTCTTGTAGGCTCTTAA+CGG | 0.408849 | 2.4:+712459 | None:intergenic |
CACATACTAAAGTACCTAAC+TGG | 0.418602 | 2.4:-713643 | MS.gene067468:CDS |
TTTGGACACACAGGAGGAAA+TGG | 0.419258 | 2.4:-714492 | MS.gene067468:intron |
TTGGATGGTTAAGCTCCTCT+TGG | 0.431425 | 2.4:-716075 | MS.gene067468:CDS |
CTTCTTTGTTTGGAATAGAA+AGG | 0.435435 | 2.4:+712431 | None:intergenic |
AGCAAAAGAAAGACTAACTT+TGG | 0.443191 | 2.4:-715633 | MS.gene067468:CDS |
CAGTCTATATGGACCCCAAT+AGG | 0.445142 | 2.4:-714379 | MS.gene067468:CDS |
AATGGTCCAAGAACCAAAAC+TGG | 0.452263 | 2.4:+713697 | None:intergenic |
GCGGCGGCGGTGGTAGCAGC+AGG | 0.455436 | 2.4:+716161 | None:intergenic |
GGAAGATTCTGCGGCGGCGG+TGG | 0.458764 | 2.4:+716151 | None:intergenic |
TGGCTTCATCGCTTCTTGGA+TGG | 0.463428 | 2.4:-716090 | MS.gene067468:CDS |
TGACTTACTTGGTAGGAATT+GGG | 0.464359 | 2.4:+713446 | None:intergenic |
AAAACTGAAGGATTTGGGAT+TGG | 0.468538 | 2.4:-712515 | MS.gene067468:CDS |
TTGTAGAATTGGTACTGCTA+TGG | 0.470187 | 2.4:-713790 | MS.gene067468:intron |
ACAAGCTTATGTTCATGTTA+GGG | 0.475300 | 2.4:-713593 | MS.gene067468:CDS |
AGGTCTTAGCTGAACCAGTT+AGG | 0.475944 | 2.4:+713629 | None:intergenic |
GACACCATGACATCCATTAA+CGG | 0.478255 | 2.4:+715571 | None:intergenic |
AAATGGGCACTTGAAAGAGT+TGG | 0.499323 | 2.4:-715660 | MS.gene067468:CDS |
ATGGTGGAGCCAGCAGTGAA+TGG | 0.499409 | 2.4:-714473 | MS.gene067468:CDS |
CTGACGGGGTTATCTGTAAC+GGG | 0.499421 | 2.4:+715533 | None:intergenic |
TTGGTAGGAATTGGGTACTC+AGG | 0.501534 | 2.4:+713454 | None:intergenic |
AGCGATGAAGCCACCGGCGC+CGG | 0.501975 | 2.4:+716100 | None:intergenic |
TATGGTTTCGCCGGAAATTG+AGG | 0.503195 | 2.4:+716130 | None:intergenic |
ACCGGCGCCGGTGACACATA+TGG | 0.505863 | 2.4:+716112 | None:intergenic |
TGGGATGTGGCAAAAGAGAA+AGG | 0.508276 | 2.4:-713742 | MS.gene067468:CDS |
TGTAGAATTGGTACTGCTAT+GGG | 0.509990 | 2.4:-713789 | MS.gene067468:intron |
ACCATATGTGTCACCGGCGC+CGG | 0.511679 | 2.4:-716113 | MS.gene067468:CDS |
CTTTAACGGAGTTAAGATCA+AGG | 0.524956 | 2.4:+715597 | None:intergenic |
TGAGGAAGATTCTGCGGCGG+CGG | 0.526567 | 2.4:+716148 | None:intergenic |
TCATATAAACATTCACTCAC+TGG | 0.528141 | 2.4:+712484 | None:intergenic |
GTTAAGCTCCTCTTGGAGAA+AGG | 0.529443 | 2.4:-716068 | MS.gene067468:CDS |
TTATGTTCATGTTAGGGATG+TGG | 0.538028 | 2.4:-713587 | MS.gene067468:CDS |
GGGATGTGGCAAAAGAGAAA+GGG | 0.541884 | 2.4:-713741 | MS.gene067468:CDS |
AGTGGCTGAACAAGCAGCAT+GGG | 0.546309 | 2.4:-713761 | MS.gene067468:CDS |
ATATGTGTCACCGGCGCCGG+TGG | 0.552094 | 2.4:-716110 | MS.gene067468:CDS |
TTAAGAGTGACTTACTTGGT+AGG | 0.563350 | 2.4:+713439 | None:intergenic |
TGGTAGGAATTGGGTACTCA+GGG | 0.564638 | 2.4:+713455 | None:intergenic |
TGGGTACTCAGGGAAATACT+TGG | 0.564646 | 2.4:+713465 | None:intergenic |
CAGTGGCTGAACAAGCAGCA+TGG | 0.568830 | 2.4:-713762 | MS.gene067468:CDS |
CCAAGAAGCGATGAAGCCAC+CGG | 0.571020 | 2.4:+716094 | None:intergenic |
GGCGAAACCATATGTGTCAC+CGG | 0.572762 | 2.4:-716119 | MS.gene067468:CDS |
AGCTTGTGTTGCATTTGCAT+AGG | 0.575371 | 2.4:+713609 | None:intergenic |
TTGGAATAGAAAGGTGACCT+TGG | 0.582400 | 2.4:+712440 | None:intergenic |
GAAGCCGTTAATGGATGTCA+TGG | 0.583328 | 2.4:-715575 | MS.gene067468:CDS |
ACTGACGGGGTTATCTGTAA+CGG | 0.589424 | 2.4:+715532 | None:intergenic |
CAACATCAACACTCCTATTG+GGG | 0.595944 | 2.4:+714366 | None:intergenic |
CAATAGGAGTGTTGATGTTG+AGG | 0.599834 | 2.4:-714363 | MS.gene067468:CDS |
GGTGACACATATGGTTTCGC+CGG | 0.608771 | 2.4:+716121 | None:intergenic |
AGAGGAACCTTGCGAAACCC+AGG | 0.613164 | 2.4:-716035 | MS.gene067468:intron |
TGAACAAGCAGCATGGGATG+TGG | 0.613682 | 2.4:-713755 | MS.gene067468:CDS |
CAGTATAGCCTTTCTCCAAG+AGG | 0.617628 | 2.4:+716060 | None:intergenic |
GGACACACAGGAGGAAATGG+TGG | 0.629666 | 2.4:-714489 | MS.gene067468:intron |
TTGATTGTAGGTTGTAGCAA+TGG | 0.640557 | 2.4:+713679 | None:intergenic |
GAATTTCAACAAGCTCTCCA+CGG | 0.644131 | 2.4:+713491 | None:intergenic |
GGGCACTTGAAAGAGTTGGA+AGG | 0.662593 | 2.4:-715656 | MS.gene067468:CDS |
AAGTATCTACCAGAAGCAGA+AGG | 0.665232 | 2.4:+713535 | None:intergenic |
GGATGTGGCAAAAGAGAAAG+GGG | 0.667382 | 2.4:-713740 | MS.gene067468:CDS |
TGTGGCAAAAGAGAAAGGGG+TGG | 0.680248 | 2.4:-713737 | MS.gene067468:CDS |
GGAAATTGAGGAAGATTCTG+CGG | 0.685599 | 2.4:+716142 | None:intergenic |
AGAAGCAAAAGTGAGGCGCG+TGG | 0.702036 | 2.4:-714423 | MS.gene067468:CDS |
AATTGAGGAAGATTCTGCGG+CGG | 0.716984 | 2.4:+716145 | None:intergenic |
GTTAAGAGCCTACAAGACCA+AGG | 0.728061 | 2.4:-712457 | MS.gene067468:CDS |
CTGCTGCAGAAGCAAAAGTG+AGG | 0.741203 | 2.4:-714430 | MS.gene067468:CDS |
GCTGAAAGTTCACTTCACCG+TGG | 0.785254 | 2.4:-713508 | MS.gene067468:CDS |
GTACTGCTATGGGAAAGCAG+TGG | 0.795137 | 2.4:-713779 | MS.gene067468:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATAATAATAATAATAATT+TGG | - | chr2.4:715524-715543 | MS.gene067468:intron | 0.0% |
!! | ATAAATTTAATAATTCCTTT+AGG | + | chr2.4:715771-715790 | None:intergenic | 10.0% |
!! | ATTAAATTTATAAAATCAAG+TGG | - | chr2.4:715780-715799 | MS.gene067468:intron | 10.0% |
!! | TATAATAATATTACAAGATT+TGG | - | chr2.4:714349-714368 | MS.gene067468:CDS | 10.0% |
!! | TATTTATGTGAATTAAATTA+AGG | + | chr2.4:712586-712605 | None:intergenic | 10.0% |
!!! | AATACTATTATTTTTCTTTT+TGG | + | chr2.4:713158-713177 | None:intergenic | 10.0% |
!!! | ATAACATTTAACTTTTTTAA+AGG | + | chr2.4:713278-713297 | None:intergenic | 10.0% |
!!! | ATATTTTTTTAATTCTAGAA+TGG | - | chr2.4:715894-715913 | MS.gene067468:intron | 10.0% |
!!! | TAACATTTAACTTTTTTAAA+GGG | + | chr2.4:713277-713296 | None:intergenic | 10.0% |
!!! | TATTGATTTTATTCTTTTTT+TGG | - | chr2.4:715194-715213 | MS.gene067468:intron | 10.0% |
!! | AAATTTGAATATTGTAGAAT+TGG | - | chr2.4:714771-714790 | MS.gene067468:intron | 15.0% |
!! | ATATAATATCTTAGATATGA+TGG | + | chr2.4:713348-713367 | None:intergenic | 15.0% |
!! | GAATGAAAAAAATTCAATTA+AGG | + | chr2.4:713101-713120 | None:intergenic | 15.0% |
!! | TAATTCAATGTAATTATATG+CGG | + | chr2.4:712737-712756 | None:intergenic | 15.0% |
!! | TCAAAAACATTTCATTTAAA+TGG | + | chr2.4:715270-715289 | None:intergenic | 15.0% |
!!! | AAATTTTACTATGTATGTAT+GGG | - | chr2.4:712777-712796 | MS.gene067468:intron | 15.0% |
!!! | AATTTACCATATTATTTTAG+AGG | + | chr2.4:713406-713425 | None:intergenic | 15.0% |
!!! | GTAAATTTTATCAAAAGAAA+TGG | - | chr2.4:713419-713438 | MS.gene067468:intron | 15.0% |
!!! | TAAATTTTACTATGTATGTA+TGG | - | chr2.4:712776-712795 | MS.gene067468:intron | 15.0% |
!!! | TATTATTTTTCTTTTTGGAT+TGG | + | chr2.4:713153-713172 | None:intergenic | 15.0% |
!!! | TCTATTTTTTTTTTTTTGAG+AGG | + | chr2.4:713476-713495 | None:intergenic | 15.0% |
!!! | TTTGATTTGAATTCTTAATT+TGG | - | chr2.4:714062-714081 | MS.gene067468:intron | 15.0% |
!! | AAAATTAAATAAATGAAGGG+AGG | + | chr2.4:714297-714316 | None:intergenic | 20.0% |
!! | AAATAAAAAACTGAAGGATT+TGG | - | chr2.4:716051-716070 | MS.gene067468:CDS | 20.0% |
!! | AAATATGAATCAATCATGAT+TGG | + | chr2.4:714420-714439 | None:intergenic | 20.0% |
!! | AAATTAAATAAATGAAGGGA+GGG | + | chr2.4:714296-714315 | None:intergenic | 20.0% |
!! | AATAAAAAACTGAAGGATTT+GGG | - | chr2.4:716052-716071 | MS.gene067468:CDS | 20.0% |
!! | AATATTACAAGATTTGGATT+AGG | - | chr2.4:714355-714374 | MS.gene067468:CDS | 20.0% |
!! | AATTTAATAATTCCTTTAGG+TGG | + | chr2.4:715768-715787 | None:intergenic | 20.0% |
!! | ACATTTCATTTAAATGGAAA+TGG | + | chr2.4:715264-715283 | None:intergenic | 20.0% |
!!! | CAAGGATTTTGATAATATTT+TGG | - | chr2.4:715425-715444 | MS.gene067468:intron | 20.0% |
!!! | GTTTTAGTATTTTGCAATTT+TGG | - | chr2.4:715317-715336 | MS.gene067468:intron | 20.0% |
!!! | TCTTTTTAGGATAATAAATG+TGG | - | chr2.4:713721-713740 | MS.gene067468:CDS | 20.0% |
!!! | TTAGATATGATGGAATTAAA+AGG | + | chr2.4:713338-713357 | None:intergenic | 20.0% |
!!! | TTCAAATCGCTTTTATTTTA+GGG | + | chr2.4:714753-714772 | None:intergenic | 20.0% |
!!! | TTTCAAATCGCTTTTATTTT+AGG | + | chr2.4:714754-714773 | None:intergenic | 20.0% |
!!! | TTTTTATTTGAGAAGATATG+TGG | + | chr2.4:716040-716059 | None:intergenic | 20.0% |
!!! | TTTTTTTGGCATATATATCA+TGG | - | chr2.4:715208-715227 | MS.gene067468:intron | 20.0% |
! | AAATGAATTAAAAACTGACG+GGG | + | chr2.4:713056-713075 | None:intergenic | 25.0% |
! | ACTTTCGCATAAAATCAAAT+TGG | + | chr2.4:714035-714054 | None:intergenic | 25.0% |
! | ATGTCATGTGATTATTTGAA+CGG | - | chr2.4:713656-713675 | MS.gene067468:CDS | 25.0% |
! | CCACATAAACAAATCAAATT+TGG | + | chr2.4:715731-715750 | None:intergenic | 25.0% |
! | CTTCTCAAATAAAAAACTGA+AGG | - | chr2.4:716045-716064 | MS.gene067468:CDS | 25.0% |
! | GAAATGAATTAAAAACTGAC+GGG | + | chr2.4:713057-713076 | None:intergenic | 25.0% |
! | GAAGAATAGAATAGAAATAG+AGG | + | chr2.4:713079-713098 | None:intergenic | 25.0% |
! | GGAAATGAATTAAAAACTGA+CGG | + | chr2.4:713058-713077 | None:intergenic | 25.0% |
! | TAACACGAAAACTAGTAAAA+GGG | + | chr2.4:713884-713903 | None:intergenic | 25.0% |
! | TTAACACGAAAACTAGTAAA+AGG | + | chr2.4:713885-713904 | None:intergenic | 25.0% |
! | TTGCAAAATACTAAAACTTG+TGG | + | chr2.4:715314-715333 | None:intergenic | 25.0% |
! | TTTAGACAACATGTATGATT+AGG | + | chr2.4:715921-715940 | None:intergenic | 25.0% |
! | TTTCAGATGATCCAAAAAAT+GGG | - | chr2.4:712896-712915 | MS.gene067468:intron | 25.0% |
!! | AAAAAACGAGTCTAAAATCT+AGG | - | chr2.4:714469-714488 | MS.gene067468:CDS | 25.0% |
!! | ACATGAACTAGTTAATTTTG+AGG | + | chr2.4:715973-715992 | None:intergenic | 25.0% |
!! | ATAACGTTGTTGATAAGATT+AGG | - | chr2.4:712811-712830 | MS.gene067468:intron | 25.0% |
!! | TTTATTTGCTACTGATCAAT+AGG | - | chr2.4:714314-714333 | MS.gene067468:intron | 25.0% |
!! | TTTTCAATCTTCTCTTTCAA+AGG | - | chr2.4:713125-713144 | MS.gene067468:intron | 25.0% |
!! | TTTTCAGATGATCCAAAAAA+TGG | - | chr2.4:712895-712914 | MS.gene067468:intron | 25.0% |
!!! | AATTTTGAGGCTATGATTAA+AGG | + | chr2.4:715960-715979 | None:intergenic | 25.0% |
!!! | ACATAGCCTCTAAAATAATA+TGG | - | chr2.4:713397-713416 | MS.gene067468:intron | 25.0% |
!!! | AGTAGAATATTTTTTGTACC+TGG | + | chr2.4:712558-712577 | None:intergenic | 25.0% |
!!! | ATATTATTTTAGAGGCTATG+TGG | + | chr2.4:713398-713417 | None:intergenic | 25.0% |
!!! | CCAAATTTGATTTGTTTATG+TGG | - | chr2.4:715728-715747 | MS.gene067468:intron | 25.0% |
!!! | CTGTTATTATATTTTGACGT+GGG | - | chr2.4:712841-712860 | MS.gene067468:intron | 25.0% |
!!! | GTAGAATATTTTTTGTACCT+GGG | + | chr2.4:712557-712576 | None:intergenic | 25.0% |
!!! | TTTTTTAAGAGTGACTTACT+TGG | + | chr2.4:715140-715159 | None:intergenic | 25.0% |
AATGTAATTATATGCGGCAT+CGG | + | chr2.4:712731-712750 | None:intergenic | 30.0% | |
ACAAGCTTATGTTCATGTTA+GGG | - | chr2.4:714979-714998 | MS.gene067468:intron | 30.0% | |
ACGAAATACGTAGTATACTT+TGG | + | chr2.4:715234-715253 | None:intergenic | 30.0% | |
AGCAAAAGAAAGACTAACTT+TGG | - | chr2.4:712939-712958 | MS.gene067468:intron | 30.0% | |
ATAATTCCTTTAGGTGGAAA+TGG | + | chr2.4:715762-715781 | None:intergenic | 30.0% | |
ATCATGAATACCGAATATGT+TGG | - | chr2.4:714658-714677 | MS.gene067468:intron | 30.0% | |
CTTCCTAATAATATGCTCAT+GGG | - | chr2.4:713970-713989 | MS.gene067468:intron | 30.0% | |
GTTGTATTACTCTCTATCTT+GGG | - | chr2.4:713201-713220 | MS.gene067468:intron | 30.0% | |
TAAAAAGAAGCAAGCAATCA+AGG | + | chr2.4:713709-713728 | None:intergenic | 30.0% | |
TCATATAAACATTCACTCAC+TGG | + | chr2.4:716091-716110 | None:intergenic | 30.0% | |
TCATGAATACCGAATATGTT+GGG | - | chr2.4:714659-714678 | MS.gene067468:intron | 30.0% | |
TCTAGAGAATCTTCTTTGTT+TGG | + | chr2.4:716154-716173 | None:intergenic | 30.0% | |
TCTTCCTAATAATATGCTCA+TGG | - | chr2.4:713969-713988 | MS.gene067468:intron | 30.0% | |
! | AATTCTTAATTTGGACACAC+AGG | - | chr2.4:714071-714090 | MS.gene067468:intron | 30.0% |
! | CTTCTTTGTTTGGAATAGAA+AGG | + | chr2.4:716144-716163 | None:intergenic | 30.0% |
! | TTGATTGCTTGCTTCTTTTT+AGG | - | chr2.4:713708-713727 | MS.gene067468:CDS | 30.0% |
!!! | GCTGTTATTATATTTTGACG+TGG | - | chr2.4:712840-712859 | MS.gene067468:intron | 30.0% |
!!! | GCTTTTATTTTAGGGTTTAG+CGG | + | chr2.4:714745-714764 | None:intergenic | 30.0% |
AATGTCTCTAGTAAGAAGGT+TGG | + | chr2.4:713766-713785 | None:intergenic | 35.0% | |
ACCAACTTCTTCCATGAATA+TGG | - | chr2.4:715839-715858 | MS.gene067468:intron | 35.0% | |
ACCAATTAGGTAAAGAGTCA+AGG | - | chr2.4:715407-715426 | MS.gene067468:intron | 35.0% | |
AGAATTGGAGACGAATTGAA+AGG | - | chr2.4:715689-715708 | MS.gene067468:intron | 35.0% | |
AGTCCCATGAGCATATTATT+AGG | + | chr2.4:713976-713995 | None:intergenic | 35.0% | |
ATGCAGTCATATGATTGTGA+TGG | - | chr2.4:714532-714551 | MS.gene067468:intron | 35.0% | |
ATTTAGCATGCCCATATTCA+TGG | + | chr2.4:715853-715872 | None:intergenic | 35.0% | |
CACAAGCTTATGTTCATGTT+AGG | - | chr2.4:714978-714997 | MS.gene067468:intron | 35.0% | |
CACACAAGTGCAAATATGTA+GGG | + | chr2.4:714715-714734 | None:intergenic | 35.0% | |
CATGAATACCGAATATGTTG+GGG | - | chr2.4:714660-714679 | MS.gene067468:intron | 35.0% | |
CATGTGATTATTTGAACGGA+TGG | - | chr2.4:713660-713679 | MS.gene067468:CDS | 35.0% | |
CCAACTTCTTCCATGAATAT+GGG | - | chr2.4:715840-715859 | MS.gene067468:intron | 35.0% | |
CGTTGTATTACTCTCTATCT+TGG | - | chr2.4:713200-713219 | MS.gene067468:intron | 35.0% | |
CTTTAACGGAGTTAAGATCA+AGG | + | chr2.4:712978-712997 | None:intergenic | 35.0% | |
GTGAGTGTGTTGAAAAGAAT+TGG | - | chr2.4:715674-715693 | MS.gene067468:intron | 35.0% | |
TAAATAAATGAAGGGAGGGA+GGG | + | chr2.4:714292-714311 | None:intergenic | 35.0% | |
TCAACATCAACACTCCTATT+GGG | + | chr2.4:714210-714229 | None:intergenic | 35.0% | |
TCACACAAGTGCAAATATGT+AGG | + | chr2.4:714716-714735 | None:intergenic | 35.0% | |
TCCATTAACGGCTTCTTTAA+CGG | + | chr2.4:712992-713011 | None:intergenic | 35.0% | |
TCCTTGACTCTTTACCTAAT+TGG | + | chr2.4:715411-715430 | None:intergenic | 35.0% | |
TCTAGGTGTCTGATATTGAT+TGG | - | chr2.4:714486-714505 | MS.gene067468:intron | 35.0% | |
TGACAATGTCTCTAGTAAGA+AGG | + | chr2.4:713770-713789 | None:intergenic | 35.0% | |
TGACTTACTTGGTAGGAATT+GGG | + | chr2.4:715129-715148 | None:intergenic | 35.0% | |
TGTAGAATTGGTACTGCTAT+GGG | - | chr2.4:714783-714802 | MS.gene067468:intron | 35.0% | |
TGTGATGTGAGTTACCAATT+AGG | - | chr2.4:715394-715413 | MS.gene067468:intron | 35.0% | |
TTAAATAAATGAAGGGAGGG+AGG | + | chr2.4:714293-714312 | None:intergenic | 35.0% | |
TTAAGAGTGACTTACTTGGT+AGG | + | chr2.4:715136-715155 | None:intergenic | 35.0% | |
TTATGTTCATGTTAGGGATG+TGG | - | chr2.4:714985-715004 | MS.gene067468:intron | 35.0% | |
TTGATTGTAGGTTGTAGCAA+TGG | + | chr2.4:714896-714915 | None:intergenic | 35.0% | |
TTGTAGAATTGGTACTGCTA+TGG | - | chr2.4:714782-714801 | MS.gene067468:intron | 35.0% | |
TTTAGTTGCCCCAACTATAA+TGG | + | chr2.4:714572-714591 | None:intergenic | 35.0% | |
TTTGGTATCATTACTCACGA+AGG | - | chr2.4:715335-715354 | MS.gene067468:intron | 35.0% | |
! | AAAACTGAAGGATTTGGGAT+TGG | - | chr2.4:716057-716076 | MS.gene067468:CDS | 35.0% |
! | AATTGGTAACTCACATCACA+TGG | + | chr2.4:715394-715413 | None:intergenic | 35.0% |
! | AGTTCATGTTTTACACATGC+AGG | - | chr2.4:715984-716003 | MS.gene067468:intron | 35.0% |
! | AGTTGTAGTGAATCCAGTTT+TGG | - | chr2.4:714862-714881 | MS.gene067468:intron | 35.0% |
! | CACATACTAAAGTACCTAAC+TGG | - | chr2.4:714929-714948 | MS.gene067468:intron | 35.0% |
! | GTGGTTTTCACATCATCAAT+TGG | - | chr2.4:714168-714187 | MS.gene067468:intron | 35.0% |
!! | AAGATATGTGGTTTTACTCG+AGG | + | chr2.4:716028-716047 | None:intergenic | 35.0% |
!! | AAGTTGGTGATAAGGACATT+GGG | + | chr2.4:715827-715846 | None:intergenic | 35.0% |
!! | ATTGTGCTTGCATTGATTGT+AGG | + | chr2.4:714908-714927 | None:intergenic | 35.0% |
!!! | TCTTTCAAGTGCCCATTTTT+TGG | + | chr2.4:712910-712929 | None:intergenic | 35.0% |
AAATAAATGAAGGGAGGGAG+GGG | + | chr2.4:714291-714310 | None:intergenic | 40.0% | |
AAATGGGCACTTGAAAGAGT+TGG | - | chr2.4:712912-712931 | MS.gene067468:intron | 40.0% | |
AAGTATCTACCAGAAGCAGA+AGG | + | chr2.4:715040-715059 | None:intergenic | 40.0% | |
AATGGTCCAAGAACCAAAAC+TGG | + | chr2.4:714878-714897 | None:intergenic | 40.0% | |
ACACTTTGTCTTCGTCTAAG+TGG | - | chr2.4:713369-713388 | MS.gene067468:intron | 40.0% | |
AGAAGCAAGCAATCAAGGTT+TGG | + | chr2.4:713704-713723 | None:intergenic | 40.0% | |
AGCTTGTGTTGCATTTGCAT+AGG | + | chr2.4:714966-714985 | None:intergenic | 40.0% | |
AGTGATATGTTGTCACTCCT+AGG | - | chr2.4:715573-715592 | MS.gene067468:CDS | 40.0% | |
ATCAATTGGCGCAGTCTATA+TGG | - | chr2.4:714182-714201 | MS.gene067468:intron | 40.0% | |
ATCCGGATCCATTATAGTTG+GGG | - | chr2.4:714561-714580 | MS.gene067468:intron | 40.0% | |
CAACATCAACACTCCTATTG+GGG | + | chr2.4:714209-714228 | None:intergenic | 40.0% | |
CAGATACACCCCAACATATT+CGG | + | chr2.4:714671-714690 | None:intergenic | 40.0% | |
CCCATATTCATGGAAGAAGT+TGG | + | chr2.4:715843-715862 | None:intergenic | 40.0% | |
CTCAACATCAACACTCCTAT+TGG | + | chr2.4:714211-714230 | None:intergenic | 40.0% | |
GAATTTCAACAAGCTCTCCA+CGG | + | chr2.4:715084-715103 | None:intergenic | 40.0% | |
GACACCATGACATCCATTAA+CGG | + | chr2.4:713004-713023 | None:intergenic | 40.0% | |
GAGAAAGGCTATACTGTTAG+AGG | - | chr2.4:712519-712538 | MS.gene067468:CDS | 40.0% | |
GATCCGGATCCATTATAGTT+GGG | - | chr2.4:714560-714579 | MS.gene067468:intron | 40.0% | |
GCAGAATCTTCCTCAATTTC+CGG | - | chr2.4:712432-712451 | MS.gene067468:CDS | 40.0% | |
GGAAATTGAGGAAGATTCTG+CGG | + | chr2.4:712433-712452 | None:intergenic | 40.0% | |
GTGACTTACTTGGTAGGAAT+TGG | + | chr2.4:715130-715149 | None:intergenic | 40.0% | |
TACGTTCCATTTCCACCTAA+AGG | - | chr2.4:715753-715772 | MS.gene067468:intron | 40.0% | |
TATGAGAAACCTTCTGCTTC+TGG | - | chr2.4:715028-715047 | MS.gene067468:intron | 40.0% | |
TCATTACTCACGAAGGTTAC+TGG | - | chr2.4:715342-715361 | MS.gene067468:intron | 40.0% | |
TCCGTTAAAGAAGCCGTTAA+TGG | - | chr2.4:712988-713007 | MS.gene067468:intron | 40.0% | |
TGATTATTTGAACGGATGGC+AGG | - | chr2.4:713664-713683 | MS.gene067468:CDS | 40.0% | |
TTGGAATAGAAAGGTGACCT+TGG | + | chr2.4:716135-716154 | None:intergenic | 40.0% | |
! | GGAATTTTGCAAGAACACCA+AGG | - | chr2.4:714257-714276 | MS.gene067468:intron | 40.0% |
! | TCTTAATTTGGACACACAGG+AGG | - | chr2.4:714074-714093 | MS.gene067468:intron | 40.0% |
!! | AGTTGGTGATAAGGACATTG+GGG | + | chr2.4:715826-715845 | None:intergenic | 40.0% |
!! | CAATAGGAGTGTTGATGTTG+AGG | - | chr2.4:714209-714228 | MS.gene067468:intron | 40.0% |
!! | CATGGAAGAAGTTGGTGATA+AGG | + | chr2.4:715835-715854 | None:intergenic | 40.0% |
!! | GAAGTTGGTGATAAGGACAT+TGG | + | chr2.4:715828-715847 | None:intergenic | 40.0% |
!! | GAATTGAAAGGTGTCGTAGA+TGG | - | chr2.4:715701-715720 | MS.gene067468:intron | 40.0% |
!! | TTGGTCTTGTAGGCTCTTAA+CGG | + | chr2.4:716116-716135 | None:intergenic | 40.0% |
!!! | GTGAATCCAGTTTTGGTTCT+TGG | - | chr2.4:714869-714888 | MS.gene067468:intron | 40.0% |
AATTGAGGAAGATTCTGCGG+CGG | + | chr2.4:712430-712449 | None:intergenic | 45.0% | |
ACTGACGGGGTTATCTGTAA+CGG | + | chr2.4:713043-713062 | None:intergenic | 45.0% | |
AGCAAGCAATCAAGGTTTGG+TGG | + | chr2.4:713701-713720 | None:intergenic | 45.0% | |
AGGTCTTAGCTGAACCAGTT+AGG | + | chr2.4:714946-714965 | None:intergenic | 45.0% | |
CAGTATAGCCTTTCTCCAAG+AGG | + | chr2.4:712515-712534 | None:intergenic | 45.0% | |
CAGTCTATATGGACCCCAAT+AGG | - | chr2.4:714193-714212 | MS.gene067468:intron | 45.0% | |
CGATCCGGATCCATTATAGT+TGG | - | chr2.4:714559-714578 | MS.gene067468:intron | 45.0% | |
GGATGTGGCAAAAGAGAAAG+GGG | - | chr2.4:714832-714851 | MS.gene067468:intron | 45.0% | |
GGGATGTGGCAAAAGAGAAA+GGG | - | chr2.4:714831-714850 | MS.gene067468:intron | 45.0% | |
GTTAAGAGCCTACAAGACCA+AGG | - | chr2.4:716115-716134 | MS.gene067468:CDS | 45.0% | |
GTTAAGCTCCTCTTGGAGAA+AGG | - | chr2.4:712504-712523 | MS.gene067468:CDS | 45.0% | |
TATGGTTTCGCCGGAAATTG+AGG | + | chr2.4:712445-712464 | None:intergenic | 45.0% | |
TGAGTCTTGCTGGAGTGATT+TGG | - | chr2.4:714236-714255 | MS.gene067468:intron | 45.0% | |
TGGGATGTGGCAAAAGAGAA+AGG | - | chr2.4:714830-714849 | MS.gene067468:intron | 45.0% | |
TGGGTACTCAGGGAAATACT+TGG | + | chr2.4:715110-715129 | None:intergenic | 45.0% | |
TGGTAGGAATTGGGTACTCA+GGG | + | chr2.4:715120-715139 | None:intergenic | 45.0% | |
TTCTTTGCTCCATTCACTGC+TGG | + | chr2.4:714111-714130 | None:intergenic | 45.0% | |
TTGGATGGTTAAGCTCCTCT+TGG | - | chr2.4:712497-712516 | MS.gene067468:CDS | 45.0% | |
TTGGTAGGAATTGGGTACTC+AGG | + | chr2.4:715121-715140 | None:intergenic | 45.0% | |
TTTGGACACACAGGAGGAAA+TGG | - | chr2.4:714080-714099 | MS.gene067468:intron | 45.0% | |
! | GAAGCCGTTAATGGATGTCA+TGG | - | chr2.4:712997-713016 | MS.gene067468:intron | 45.0% |
! | GATTGTGATGGAACACGATC+CGG | - | chr2.4:714544-714563 | MS.gene067468:intron | 45.0% |
! | TTTTGTACCTGGGTTTCGCA+AGG | + | chr2.4:712547-712566 | None:intergenic | 45.0% |
!! | AAAGGTGACCTTGGTCTTGT+AGG | + | chr2.4:716126-716145 | None:intergenic | 45.0% |
!! | CAAGGTTTGGTGGTGAGAAT+AGG | + | chr2.4:713691-713710 | None:intergenic | 45.0% |
!! | TAAGGACATTGGGGTTGGTA+AGG | + | chr2.4:715817-715836 | None:intergenic | 45.0% |
!! | TGCCCCAACTATAATGGATC+CGG | + | chr2.4:714566-714585 | None:intergenic | 45.0% |
!! | TTGAGGTTGATGAGTCTTGC+TGG | - | chr2.4:714226-714245 | MS.gene067468:intron | 45.0% |
!! | AAATAAAATTAAATAAATGA+AGG | + | chr2.4:714301-714320 | None:intergenic | 5.0% |
!! | AATAAAATTAAATAAATGAA+GGG | + | chr2.4:714300-714319 | None:intergenic | 5.0% |
!!! | AAAAAAATATAAAGTTTTAT+TGG | + | chr2.4:715884-715903 | None:intergenic | 5.0% |
!!! | TTTTTATTTATTTTTATTTG+TGG | - | chr2.4:713563-713582 | MS.gene067468:CDS | 5.0% |
AACCAACCACCAACGTTCCT+AGG | + | chr2.4:715593-715612 | None:intergenic | 50.0% | |
AGGGAGGGGAATATTGACCT+TGG | + | chr2.4:714277-714296 | None:intergenic | 50.0% | |
AGTGGCTGAACAAGCAGCAT+GGG | - | chr2.4:714811-714830 | MS.gene067468:intron | 50.0% | |
CTGACGGGGTTATCTGTAAC+GGG | + | chr2.4:713042-713061 | None:intergenic | 50.0% | |
CTGCTGCAGAAGCAAAAGTG+AGG | - | chr2.4:714142-714161 | MS.gene067468:intron | 50.0% | |
GCTGAAAGTTCACTTCACCG+TGG | - | chr2.4:715064-715083 | MS.gene067468:intron | 50.0% | |
GGCGAAACCATATGTGTCAC+CGG | - | chr2.4:712453-712472 | MS.gene067468:CDS | 50.0% | |
GGGCACTTGAAAGAGTTGGA+AGG | - | chr2.4:712916-712935 | MS.gene067468:intron | 50.0% | |
GGTGACACATATGGTTTCGC+CGG | + | chr2.4:712454-712473 | None:intergenic | 50.0% | |
GGTGATAAGGACATTGGGGT+TGG | + | chr2.4:715822-715841 | None:intergenic | 50.0% | |
GTACTGCTATGGGAAAGCAG+TGG | - | chr2.4:714793-714812 | MS.gene067468:intron | 50.0% | |
GTTGTCACTCCTAGGAACGT+TGG | - | chr2.4:715581-715600 | MS.gene067468:CDS | 50.0% | |
TGAACAAGCAGCATGGGATG+TGG | - | chr2.4:714817-714836 | MS.gene067468:intron | 50.0% | |
TGGCTTCATCGCTTCTTGGA+TGG | - | chr2.4:712482-712501 | MS.gene067468:CDS | 50.0% | |
TGTGGCAAAAGAGAAAGGGG+TGG | - | chr2.4:714835-714854 | MS.gene067468:intron | 50.0% | |
!! | TAGGAACGTTGGTGGTTGGT+TGG | - | chr2.4:715592-715611 | MS.gene067468:CDS | 50.0% |
AGAAGCAAAAGTGAGGCGCG+TGG | - | chr2.4:714149-714168 | MS.gene067468:intron | 55.0% | |
AGAGGAACCTTGCGAAACCC+AGG | - | chr2.4:712537-712556 | MS.gene067468:CDS | 55.0% | |
CAGTGGCTGAACAAGCAGCA+TGG | - | chr2.4:714810-714829 | MS.gene067468:intron | 55.0% | |
CCAAGAAGCGATGAAGCCAC+CGG | + | chr2.4:712481-712500 | None:intergenic | 55.0% | |
GGACACACAGGAGGAAATGG+TGG | - | chr2.4:714083-714102 | MS.gene067468:intron | 55.0% | |
GTCACTCCTAGGAACGTTGG+TGG | - | chr2.4:715584-715603 | MS.gene067468:CDS | 55.0% | |
! | ATGGTGGAGCCAGCAGTGAA+TGG | - | chr2.4:714099-714118 | MS.gene067468:intron | 55.0% |
!! | CTCCTAGGAACGTTGGTGGT+TGG | - | chr2.4:715588-715607 | MS.gene067468:CDS | 55.0% |
ACCATATGTGTCACCGGCGC+CGG | - | chr2.4:712459-712478 | MS.gene067468:CDS | 60.0% | |
CCGGTGGCTTCATCGCTTCT+TGG | - | chr2.4:712478-712497 | MS.gene067468:CDS | 60.0% | |
TGAGGAAGATTCTGCGGCGG+CGG | + | chr2.4:712427-712446 | None:intergenic | 60.0% | |
!! | GCGGCATCGGTGTCACGTAT+CGG | + | chr2.4:712718-712737 | None:intergenic | 60.0% |
! | ATATGTGTCACCGGCGCCGG+TGG | - | chr2.4:712462-712481 | MS.gene067468:CDS | 65.0% |
!! | ACCGGCGCCGGTGACACATA+TGG | + | chr2.4:712463-712482 | None:intergenic | 65.0% |
AGCGATGAAGCCACCGGCGC+CGG | + | chr2.4:712475-712494 | None:intergenic | 70.0% | |
GGAAGATTCTGCGGCGGCGG+TGG | + | chr2.4:712424-712443 | None:intergenic | 70.0% | |
! | GCGGCGGCGGTGGTAGCAGC+AGG | + | chr2.4:712414-712433 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 712408 | 716186 | 712408 | ID=MS.gene067468 |
chr2.4 | mRNA | 712408 | 716186 | 712408 | ID=MS.gene067468.t1;Parent=MS.gene067468 |
chr2.4 | exon | 716036 | 716186 | 716036 | ID=MS.gene067468.t1.exon1;Parent=MS.gene067468.t1 |
chr2.4 | CDS | 716036 | 716186 | 716036 | ID=cds.MS.gene067468.t1;Parent=MS.gene067468.t1 |
chr2.4 | exon | 715538 | 715692 | 715538 | ID=MS.gene067468.t1.exon2;Parent=MS.gene067468.t1 |
chr2.4 | CDS | 715538 | 715692 | 715538 | ID=cds.MS.gene067468.t1;Parent=MS.gene067468.t1 |
chr2.4 | exon | 714316 | 714501 | 714316 | ID=MS.gene067468.t1.exon3;Parent=MS.gene067468.t1 |
chr2.4 | CDS | 714316 | 714501 | 714316 | ID=cds.MS.gene067468.t1;Parent=MS.gene067468.t1 |
chr2.4 | exon | 713454 | 713806 | 713454 | ID=MS.gene067468.t1.exon4;Parent=MS.gene067468.t1 |
chr2.4 | CDS | 713454 | 713806 | 713454 | ID=cds.MS.gene067468.t1;Parent=MS.gene067468.t1 |
chr2.4 | exon | 712408 | 712588 | 712408 | ID=MS.gene067468.t1.exon5;Parent=MS.gene067468.t1 |
chr2.4 | CDS | 712408 | 712588 | 712408 | ID=cds.MS.gene067468.t1;Parent=MS.gene067468.t1 |
Gene Sequence |
Protein sequence |