Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06788.t1 | XP_013461490.1 | 92.5 | 871 | 64 | 1 | 1 | 870 | 1 | 871 | 0.00E+00 | 1443.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06788.t1 | Q9FHK4 | 39.7 | 131 | 68 | 1 | 639 | 769 | 470 | 589 | 1.5e-17 | 93.2 |
| MS.gene06788.t1 | Q9FHK4 | 41.7 | 60 | 35 | 0 | 1 | 60 | 1 | 60 | 2.1e-06 | 56.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06788.t1 | A0A072VBG6 | 92.5 | 871 | 64 | 1 | 1 | 870 | 1 | 871 | 0.0e+00 | 1443.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049413 | MS.gene06788 | 0.964591 | 1.61E-123 | -1.69E-46 |
| MS.gene050961 | MS.gene06788 | 0.804793 | 1.82E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene06788 | 0.821605 | 3.69E-53 | -1.69E-46 |
| MS.gene054893 | MS.gene06788 | 0.815285 | 1.00E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06788.t1 | MTR_3g093780 | 94.834 | 871 | 44 | 1 | 1 | 870 | 1 | 871 | 0.0 | 1687 |
| MS.gene06788.t1 | MTR_7g107300 | 60.465 | 129 | 44 | 3 | 458 | 580 | 4 | 131 | 2.21e-37 | 138 |
| MS.gene06788.t1 | MTR_5g068060 | 52.128 | 94 | 43 | 2 | 1 | 92 | 1 | 94 | 3.74e-17 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06788.t1 | AT5G05190 | 47.826 | 92 | 43 | 1 | 635 | 721 | 461 | 552 | 3.57e-21 | 99.4 |
| MS.gene06788.t1 | AT3G56410 | 45.714 | 70 | 38 | 0 | 645 | 714 | 223 | 292 | 6.76e-13 | 73.6 |
| MS.gene06788.t1 | AT3G56410 | 45.714 | 70 | 38 | 0 | 645 | 714 | 312 | 381 | 8.35e-13 | 73.2 |
| MS.gene06788.t1 | AT3G56410 | 45.714 | 70 | 38 | 0 | 645 | 714 | 359 | 428 | 9.09e-13 | 73.2 |
Find 192 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCATATTATGATGATTA+TGG | 0.138733 | 3.3:+78100096 | MS.gene06788:CDS |
| GCAGATGCGGTGTTGATTTC+TGG | 0.149630 | 3.3:+78098449 | MS.gene06788:CDS |
| GAAATCACTGAAACTAATTT+TGG | 0.164374 | 3.3:+78098407 | MS.gene06788:CDS |
| TGTAACTGGCTTCTCTTTAT+TGG | 0.169718 | 3.3:-78098489 | None:intergenic |
| ACATTTAACTATCCGAATTT+TGG | 0.174552 | 3.3:-78097394 | None:intergenic |
| TCACAGTGAGTGATGTTATT+TGG | 0.210386 | 3.3:-78098260 | None:intergenic |
| TCAAAGTTTAATGGTGTTCT+TGG | 0.238441 | 3.3:+78098887 | MS.gene06788:CDS |
| GTTTCAGTGATTTCCATTTC+AGG | 0.261394 | 3.3:-78098398 | None:intergenic |
| GATCATAGTTCAAAGTTTAA+TGG | 0.262570 | 3.3:+78098878 | MS.gene06788:CDS |
| GGAAGAAGTTGCCGGCATTT+AGG | 0.282712 | 3.3:-78097417 | None:intergenic |
| AATCCTGAAGTGGAAATTAT+TGG | 0.286338 | 3.3:+78098521 | MS.gene06788:CDS |
| TCAAGAGAGTGTTATTTAGA+TGG | 0.287618 | 3.3:+78098113 | MS.gene06788:CDS |
| GGATTTGCACCTTCTGTAAC+TGG | 0.294631 | 3.3:-78098503 | None:intergenic |
| GAACAAATTAAGTCCTCTTT+TGG | 0.307285 | 3.3:-78098326 | None:intergenic |
| TTCCAGTAATTTCCCCTTCA+AGG | 0.315354 | 3.3:-78098658 | None:intergenic |
| TTTCCAATAATTTCCACTTC+AGG | 0.322328 | 3.3:-78098524 | None:intergenic |
| TGCCTTCTGAGTGACAATTT+AGG | 0.324245 | 3.3:-78098215 | None:intergenic |
| TTTCATATTATGATGATTAT+GGG | 0.327417 | 3.3:+78100097 | MS.gene06788:CDS |
| TGGAGCTGATTTATCACTAT+TGG | 0.334684 | 3.3:-78098624 | None:intergenic |
| TACAGCTAAGAAACAAAGTT+TGG | 0.337502 | 3.3:+78097944 | MS.gene06788:intron |
| ATTATTGGAAATGATTTAGA+AGG | 0.342099 | 3.3:+78098536 | MS.gene06788:CDS |
| ATTGAGGAGATAAGTAATAA+TGG | 0.344048 | 3.3:+78098284 | MS.gene06788:CDS |
| ATAGCTGATTGGTCATTGTT+AGG | 0.346593 | 3.3:-78098758 | None:intergenic |
| TGCATTGATTTCTTGCATAC+TGG | 0.352905 | 3.3:-78097982 | None:intergenic |
| TGTTGTGTCCACTTCAGATT+TGG | 0.354447 | 3.3:-78098789 | None:intergenic |
| CTTGTTGCTTCAGCTGAATA+AGG | 0.358091 | 3.3:-78099547 | None:intergenic |
| AGCTCCTCGTATGGGGATCT+TGG | 0.360440 | 3.3:+78099025 | MS.gene06788:CDS |
| GTTGAGCTAGGAGAGACATT+TGG | 0.361833 | 3.3:-78100210 | None:intergenic |
| TCATCATGCACTCCATTTGA+TGG | 0.364226 | 3.3:-78099226 | None:intergenic |
| AACCTTGAAGGGGAAATTAC+TGG | 0.369393 | 3.3:+78098656 | MS.gene06788:CDS |
| TTGAGCTAGGAGAGACATTT+GGG | 0.377528 | 3.3:-78100209 | None:intergenic |
| TTCATTACAAAGACCAAAAG+AGG | 0.384209 | 3.3:+78098313 | MS.gene06788:CDS |
| ATAATCATCATAATATGAAA+TGG | 0.389072 | 3.3:-78100094 | None:intergenic |
| CAGGAAATTGTCAGCAGAAA+AGG | 0.389892 | 3.3:+78100332 | MS.gene06788:CDS |
| CCTTCAAGGTTCGTACCAAC+TGG | 0.397424 | 3.3:-78098644 | None:intergenic |
| TTTCCTGGTTTCAGACATAC+TGG | 0.398983 | 3.3:-78100316 | None:intergenic |
| CTGTGGTGAGGAAATACTTA+AGG | 0.400170 | 3.3:+78099752 | MS.gene06788:CDS |
| GATAGGGGACAGACCTGAAA+TGG | 0.402925 | 3.3:+78098385 | MS.gene06788:CDS |
| TATGACAAATCAGCTCTGAT+AGG | 0.403629 | 3.3:+78098368 | MS.gene06788:CDS |
| CTCTCCTAGCTCAACATTCA+AGG | 0.405053 | 3.3:+78100218 | MS.gene06788:CDS |
| GCCCCTCTTATCACTTTACT+TGG | 0.409919 | 3.3:-78100408 | None:intergenic |
| CTGTGCTGTCTTTCATGACA+TGG | 0.414712 | 3.3:-78099084 | None:intergenic |
| TCCAACATGAAGATTTATAC+AGG | 0.415572 | 3.3:+78099647 | MS.gene06788:CDS |
| AACATATTTACCACCATTCA+AGG | 0.420023 | 3.3:-78100184 | None:intergenic |
| GTTCACAGACGAAGAAGAAC+TGG | 0.424525 | 3.3:+78098175 | MS.gene06788:CDS |
| ACAGAATATCCTTGAGGCTC+TGG | 0.425857 | 3.3:-78097438 | None:intergenic |
| ATTTGTTCATCTGATGAAGA+TGG | 0.427120 | 3.3:+78098341 | MS.gene06788:CDS |
| GTAAGGTGGTTACCAAAATT+CGG | 0.427969 | 3.3:+78097382 | MS.gene06788:CDS |
| TCTTCGTCTGTGAACTTGAA+TGG | 0.431704 | 3.3:-78098167 | None:intergenic |
| CAAGAAATCAATGCAGCTCC+TGG | 0.432286 | 3.3:+78097990 | MS.gene06788:CDS |
| CCTTTCTCATCGAATACTAT+AGG | 0.433792 | 3.3:+78099970 | MS.gene06788:CDS |
| GAGTGTTATTTAGATGGAAA+TGG | 0.434349 | 3.3:+78098119 | MS.gene06788:CDS |
| TCGAGAATGCCTTACAGATC+AGG | 0.435054 | 3.3:+78099187 | MS.gene06788:CDS |
| TCCGCGAGTACTTATGCCTT+TGG | 0.441596 | 3.3:-78099522 | None:intergenic |
| GGAGTAGAAGACTTGAATAA+TGG | 0.442556 | 3.3:+78098557 | MS.gene06788:CDS |
| CCAGTTGGTACGAACCTTGA+AGG | 0.447258 | 3.3:+78098644 | MS.gene06788:CDS |
| CTTAAGGGACAAACATAACT+TGG | 0.447454 | 3.3:+78099768 | MS.gene06788:CDS |
| TCCTCGGAAAGATAGTTTGA+AGG | 0.454231 | 3.3:+78098073 | MS.gene06788:CDS |
| GAAGGTCATGGCTATGGTAT+TGG | 0.459591 | 3.3:-78099426 | None:intergenic |
| CACTAACCACCTCGCTTCTA+CGG | 0.460505 | 3.3:-78100014 | None:intergenic |
| CGTAGAAGCGAGGTGGTTAG+TGG | 0.462545 | 3.3:+78100015 | MS.gene06788:CDS |
| CAATGACCAATCAGCTATAG+AGG | 0.463430 | 3.3:+78098763 | MS.gene06788:CDS |
| TATATTTGAAGGAATATGTC+TGG | 0.464306 | 3.3:+78097360 | None:intergenic |
| GAGGTAAAGCCTCCACAAAA+AGG | 0.465708 | 3.3:+78100354 | MS.gene06788:CDS |
| ACGGATACAGATGAATCAAC+TGG | 0.473634 | 3.3:+78100285 | MS.gene06788:CDS |
| CAACAAATTCATCCCTTGAA+TGG | 0.475924 | 3.3:+78100171 | MS.gene06788:CDS |
| ATATGAGCTTCTTGTGGTTG+AGG | 0.478521 | 3.3:-78098930 | None:intergenic |
| TGGTATCCTCTATAGCTGAT+TGG | 0.481238 | 3.3:-78098769 | None:intergenic |
| ACACCAAGTAAAGTGATAAG+AGG | 0.482329 | 3.3:+78100405 | MS.gene06788:CDS |
| TTGCTAATAGCTCCTCGTAT+GGG | 0.484351 | 3.3:+78099017 | MS.gene06788:CDS |
| ATGACAAATCAGCTCTGATA+GGG | 0.484835 | 3.3:+78098369 | MS.gene06788:CDS |
| CTTTCATAGCCTGATCTGTA+AGG | 0.485476 | 3.3:-78099196 | None:intergenic |
| TAATCATCATAATATGAAAT+GGG | 0.485762 | 3.3:-78100093 | None:intergenic |
| TGTGGTGAGGAAATACTTAA+GGG | 0.486354 | 3.3:+78099753 | MS.gene06788:CDS |
| GTTATTTGGACCACCTTTGT+TGG | 0.486422 | 3.3:-78098246 | None:intergenic |
| CATCACTCACTGTGAGATTG+AGG | 0.490880 | 3.3:+78098268 | MS.gene06788:CDS |
| TTCTGCTGGTGTATCTTACA+AGG | 0.491674 | 3.3:+78099384 | MS.gene06788:CDS |
| GCTGAAGGAATGACCAGAAA+AGG | 0.496200 | 3.3:+78098986 | MS.gene06788:CDS |
| AGAAGAACTGGAAAGTGAGT+TGG | 0.497447 | 3.3:+78098187 | MS.gene06788:CDS |
| AGGTACTCTTCATAAACTCA+TGG | 0.498632 | 3.3:+78100374 | MS.gene06788:CDS |
| TTTGTTGTGTAAGAGAAAGA+AGG | 0.499054 | 3.3:-78100155 | None:intergenic |
| TAAGAGGGGCATCTTGTTGA+AGG | 0.499268 | 3.3:+78100421 | MS.gene06788:CDS |
| GAAAGTGGCAGGCCATCAAA+TGG | 0.507500 | 3.3:+78099214 | MS.gene06788:CDS |
| GTGTACAAGTGTGGTGGATG+TGG | 0.512363 | 3.3:+78097459 | MS.gene06788:CDS |
| GCATATTGATAGAAAACGTC+AGG | 0.513186 | 3.3:+78098046 | MS.gene06788:CDS |
| AAGGAATATGTCTGGTAAGG+TGG | 0.515393 | 3.3:+78097368 | None:intergenic |
| CGACATCACAAGCCAGTGGC+AGG | 0.515436 | 3.3:+78099796 | MS.gene06788:CDS |
| CTTGATCACTCTAGATGTAT+CGG | 0.516311 | 3.3:+78099472 | MS.gene06788:CDS |
| GCCATGACCTTCATGAGGGA+AGG | 0.519968 | 3.3:+78099437 | MS.gene06788:CDS |
| TCCTCTCCTTCTCCCTCTTG+TGG | 0.520199 | 3.3:-78098719 | None:intergenic |
| AATCTGCAGGTAGCTGAAGC+AGG | 0.520263 | 3.3:-78099855 | None:intergenic |
| CGAGTACTTATGCCTTTGGC+GGG | 0.521127 | 3.3:-78099518 | None:intergenic |
| GAGGCTCTGGAAGAAGTTGC+CGG | 0.525192 | 3.3:-78097425 | None:intergenic |
| ACCTGTATAAATCTTCATGT+TGG | 0.526192 | 3.3:-78099648 | None:intergenic |
| GTTGATTCATCTGTATCCGT+TGG | 0.526902 | 3.3:-78100282 | None:intergenic |
| TCTGGTCATTCCTTCAGCAA+CGG | 0.529453 | 3.3:-78098981 | None:intergenic |
| ATTACTGGAAACAATATAGC+AGG | 0.531297 | 3.3:+78098671 | MS.gene06788:CDS |
| GGATGTGGCACTGACCTTCA+AGG | 0.532393 | 3.3:+78097474 | MS.gene06788:CDS |
| TTTGGAAACTTGTCGCTAGA+GGG | 0.532723 | 3.3:+78098425 | MS.gene06788:CDS |
| AAAGGAGCTCCACCTGCCAC+TGG | 0.533821 | 3.3:-78099808 | None:intergenic |
| CCTCATGAAGGTCATGGCTA+TGG | 0.534051 | 3.3:-78099432 | None:intergenic |
| TTTGCCTTGAATGTTGAGCT+AGG | 0.534758 | 3.3:-78100222 | None:intergenic |
| TAGTTAAATGTCCTAAATGC+CGG | 0.534878 | 3.3:+78097406 | MS.gene06788:CDS |
| TAATGCAATCGCGGCTCCAA+CGG | 0.535239 | 3.3:+78100266 | MS.gene06788:CDS |
| CCTATAGTATTCGATGAGAA+AGG | 0.535878 | 3.3:-78099970 | None:intergenic |
| TTGAAGGAATATGTCTGGTA+AGG | 0.536667 | 3.3:+78097365 | None:intergenic |
| CATTTATGACAAGTGACAAA+AGG | 0.537261 | 3.3:-78099826 | None:intergenic |
| CCTCCAGTATGTCTGAAACC+AGG | 0.539270 | 3.3:+78100313 | MS.gene06788:CDS |
| CAGTTGGTACGAACCTTGAA+GGG | 0.541921 | 3.3:+78098645 | MS.gene06788:CDS |
| CACCAAGTAAAGTGATAAGA+GGG | 0.542812 | 3.3:+78100406 | MS.gene06788:CDS |
| AAATGCAAGCAATGAGATTG+TGG | 0.546365 | 3.3:+78098829 | MS.gene06788:CDS |
| GATCAGGCTATGAAAGTGGC+AGG | 0.549263 | 3.3:+78099203 | MS.gene06788:CDS |
| CTCGCGTGAGGACACTGACC+AGG | 0.551465 | 3.3:+78099273 | MS.gene06788:CDS |
| GCGAGTACTTATGCCTTTGG+CGG | 0.552548 | 3.3:-78099519 | None:intergenic |
| TGCTAATAGCTCCTCGTATG+GGG | 0.553250 | 3.3:+78099018 | MS.gene06788:CDS |
| CTTGCTAATAGCTCCTCGTA+TGG | 0.554567 | 3.3:+78099016 | MS.gene06788:CDS |
| TGTATCGGAAGATGTAATCA+TGG | 0.555125 | 3.3:+78099487 | MS.gene06788:CDS |
| GAGAAAACCTTCCCTCATGA+AGG | 0.564438 | 3.3:-78099444 | None:intergenic |
| ATCAAATGGAGTGCATGATG+AGG | 0.568884 | 3.3:+78099228 | MS.gene06788:CDS |
| ATGGAATTGCGTCCCGCCAA+AGG | 0.570672 | 3.3:+78099506 | MS.gene06788:CDS |
| TAATGGCAATTTGCCACTAG+AGG | 0.571741 | 3.3:+78098574 | MS.gene06788:CDS |
| CTGCTGGTGTATCTTACAAG+GGG | 0.572567 | 3.3:+78099386 | MS.gene06788:CDS |
| TACAGATCAGGCTATGAAAG+TGG | 0.576466 | 3.3:+78099199 | MS.gene06788:CDS |
| TGCAGCTCCTGGAAAAGCAT+CGG | 0.577154 | 3.3:+78098001 | MS.gene06788:CDS |
| AAAGAGAAGCCAGTTACAGA+AGG | 0.579951 | 3.3:+78098494 | MS.gene06788:CDS |
| GCCACAAGAGGGAGAAGGAG+AGG | 0.582814 | 3.3:+78098718 | MS.gene06788:CDS |
| ACAAATGGAAGAGTTTCTGC+TGG | 0.583470 | 3.3:+78099370 | MS.gene06788:CDS |
| AGAGGATACCAAATCTGAAG+TGG | 0.584314 | 3.3:+78098781 | MS.gene06788:CDS |
| CATCACAAGCCAGTGGCAGG+TGG | 0.586203 | 3.3:+78099799 | MS.gene06788:CDS |
| ACATATTTACCACCATTCAA+GGG | 0.586967 | 3.3:-78100183 | None:intergenic |
| ACCTTCCCTCATGAAGGTCA+TGG | 0.587046 | 3.3:-78099438 | None:intergenic |
| GGTATTGGTATGCAGAACTA+CGG | 0.587389 | 3.3:-78099411 | None:intergenic |
| ACTATGATCTCTTAATTCTG+TGG | 0.588099 | 3.3:-78098864 | None:intergenic |
| GGTACTCTTCATAAACTCAT+GGG | 0.590389 | 3.3:+78100375 | MS.gene06788:CDS |
| TTATAAAGGAGAAAATCTGC+AGG | 0.591353 | 3.3:-78099868 | None:intergenic |
| GCCTTCAAACTATCTTTCCG+AGG | 0.593288 | 3.3:-78098074 | None:intergenic |
| GTCGCTAGAGGGAGCAGATG+CGG | 0.597570 | 3.3:+78098436 | MS.gene06788:CDS |
| AATGCTTACACCGTTGCTGA+AGG | 0.598914 | 3.3:+78098971 | MS.gene06788:CDS |
| TAATGGAAAATGGCCACAAG+AGG | 0.599730 | 3.3:+78098706 | MS.gene06788:CDS |
| TACCTAAATTGTCACTCAGA+AGG | 0.601587 | 3.3:+78098213 | MS.gene06788:CDS |
| GGAATGACCAGAAAAGGTAA+AGG | 0.602415 | 3.3:+78098992 | MS.gene06788:CDS |
| AGAAGGTGCAAATCCTGAAG+TGG | 0.603285 | 3.3:+78098511 | MS.gene06788:CDS |
| TCTGCTGGTGTATCTTACAA+GGG | 0.604895 | 3.3:+78099385 | MS.gene06788:CDS |
| CTACGGTGAAGCTCACGAGA+TGG | 0.605302 | 3.3:-78099997 | None:intergenic |
| TCAAATGGAGTGCATGATGA+GGG | 0.605561 | 3.3:+78099229 | MS.gene06788:CDS |
| TATATGAGTGAGGAAACAAA+TGG | 0.606561 | 3.3:+78099355 | MS.gene06788:CDS |
| CAAATTCATCCCTTGAATGG+TGG | 0.607888 | 3.3:+78100174 | MS.gene06788:CDS |
| GATCTGTAAGGCATTCTCGA+TGG | 0.608638 | 3.3:-78099184 | None:intergenic |
| GAAAACGTCAGGTTCTTCCT+CGG | 0.608765 | 3.3:+78098057 | MS.gene06788:CDS |
| GATGGAAATGGTGAATACAA+TGG | 0.611226 | 3.3:+78098131 | MS.gene06788:CDS |
| CTAAGACACGGGAACAACAA+TGG | 0.613621 | 3.3:-78099600 | None:intergenic |
| CACAACATGGTAATTCACGT+TGG | 0.615905 | 3.3:+78099134 | MS.gene06788:CDS |
| ACAAGAAGCTCATATATCAC+AGG | 0.619189 | 3.3:+78098938 | MS.gene06788:CDS |
| TCTTTCACACGACTCGCGTG+AGG | 0.622099 | 3.3:+78099261 | MS.gene06788:CDS |
| GAAATTGTCAGCAGAAAAGG+AGG | 0.624190 | 3.3:+78100335 | MS.gene06788:CDS |
| TGTGATATATGAGCTTCTTG+TGG | 0.626127 | 3.3:-78098936 | None:intergenic |
| AAATGGCCACAAGAGGGAGA+AGG | 0.626477 | 3.3:+78098713 | MS.gene06788:CDS |
| CCAGAATTAAAATCCTCTAG+TGG | 0.627898 | 3.3:-78098587 | None:intergenic |
| GGCATAGGGCTACTGTGGTG+AGG | 0.627962 | 3.3:+78099740 | MS.gene06788:CDS |
| AGAAGAATCTGCTAAGACAC+GGG | 0.628845 | 3.3:-78099611 | None:intergenic |
| AATGGAAAATGGCCACAAGA+GGG | 0.631353 | 3.3:+78098707 | MS.gene06788:CDS |
| GTATGTCACAAGCTGAAATG+TGG | 0.632938 | 3.3:+78099895 | MS.gene06788:CDS |
| CATAGAGTGTCCAACAAAGG+TGG | 0.635172 | 3.3:+78098236 | MS.gene06788:CDS |
| TCTGTTTCACTGAAGCATTG+TGG | 0.635814 | 3.3:-78099703 | None:intergenic |
| GAGAAGAATCTGCTAAGACA+CGG | 0.636353 | 3.3:-78099612 | None:intergenic |
| TCAGAGGCATAGGGCTACTG+TGG | 0.638205 | 3.3:+78099735 | MS.gene06788:CDS |
| TGACAAATCAGCTCTGATAG+GGG | 0.640991 | 3.3:+78098370 | MS.gene06788:CDS |
| GAAATGTGGTAAATGTTCAG+AGG | 0.642119 | 3.3:+78099909 | MS.gene06788:CDS |
| TCTGAAGTGGACACAACAGA+AGG | 0.642126 | 3.3:+78098794 | MS.gene06788:CDS |
| CAACTTCTTCCAGAGCCTCA+AGG | 0.642945 | 3.3:+78097429 | MS.gene06788:CDS |
| CCTGGTTTCAGACATACTGG+AGG | 0.645462 | 3.3:-78100313 | None:intergenic |
| CCATAGCCATGACCTTCATG+AGG | 0.648193 | 3.3:+78099432 | MS.gene06788:CDS |
| AGTGATAAATCAGCTCCAGT+TGG | 0.651091 | 3.3:+78098629 | MS.gene06788:CDS |
| AGGCATAGAGTGTCCAACAA+AGG | 0.653537 | 3.3:+78098233 | MS.gene06788:CDS |
| CAAGACTCGCTATATGAGTG+AGG | 0.657867 | 3.3:+78099345 | MS.gene06788:CDS |
| CATAGCCATGACCTTCATGA+GGG | 0.658552 | 3.3:+78099433 | MS.gene06788:CDS |
| TATTCTGTGTACAAGTGTGG+TGG | 0.659670 | 3.3:+78097453 | MS.gene06788:CDS |
| GGTAACAAGAATGATCTACA+TGG | 0.670834 | 3.3:-78099579 | None:intergenic |
| TGAGCTTCACCGTAGAAGCG+AGG | 0.674280 | 3.3:+78100005 | MS.gene06788:CDS |
| AGTTGGTACGAACCTTGAAG+GGG | 0.674859 | 3.3:+78098646 | MS.gene06788:CDS |
| GCCAAAGGCATAAGTACTCG+CGG | 0.688085 | 3.3:+78099521 | MS.gene06788:CDS |
| TGTTCCAAGATCCCCATACG+AGG | 0.688484 | 3.3:-78099029 | None:intergenic |
| CATACGAGGAGCTATTAGCA+AGG | 0.689093 | 3.3:-78099015 | None:intergenic |
| ACCAAGTAAAGTGATAAGAG+GGG | 0.689921 | 3.3:+78100407 | MS.gene06788:CDS |
| GGATATTCTGTGTACAAGTG+TGG | 0.693148 | 3.3:+78097450 | MS.gene06788:CDS |
| TAGTTGACATGAGATACTGA+TGG | 0.696878 | 3.3:-78100048 | None:intergenic |
| GTGTTGGACAATACACAACA+TGG | 0.710351 | 3.3:+78099121 | MS.gene06788:CDS |
| TAAGCGACATCACAAGCCAG+TGG | 0.712041 | 3.3:+78099792 | MS.gene06788:CDS |
| TTGTACACAGAATATCCTTG+AGG | 0.719345 | 3.3:-78097444 | None:intergenic |
| GGAAATGGTGAATACAATGG+CGG | 0.720938 | 3.3:+78098134 | MS.gene06788:CDS |
| TCATGTTGGAAATGAACACG+TGG | 0.723896 | 3.3:-78099634 | None:intergenic |
| GCTTCACCGTAGAAGCGAGG+TGG | 0.726929 | 3.3:+78100008 | MS.gene06788:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATTAAATAATGGAAAA+TGG | + | chr3.3:78098696-78098715 | MS.gene06788:CDS | 10.0% |
| !! | ATAATCATCATAATATGAAA+TGG | - | chr3.3:78100097-78100116 | None:intergenic | 15.0% |
| !! | ATTAATATCATTATTTGAAC+CGG | - | chr3.3:78097859-78097878 | None:intergenic | 15.0% |
| !! | ATTTCATATTATGATGATTA+TGG | + | chr3.3:78100096-78100115 | MS.gene06788:CDS | 15.0% |
| !! | GAAATTTATATCAATCAAAT+AGG | - | chr3.3:78097725-78097744 | None:intergenic | 15.0% |
| !! | TAATCATCATAATATGAAAT+GGG | - | chr3.3:78100096-78100115 | None:intergenic | 15.0% |
| !! | TTTCATATTATGATGATTAT+GGG | + | chr3.3:78100097-78100116 | MS.gene06788:CDS | 15.0% |
| !! | ATTATTGGAAATGATTTAGA+AGG | + | chr3.3:78098536-78098555 | MS.gene06788:CDS | 20.0% |
| ! | AAAAATGAAACTGATGAGAA+TGG | + | chr3.3:78099297-78099316 | MS.gene06788:CDS | 25.0% |
| ! | AATTCTCATGTAAATGTTGT+TGG | - | chr3.3:78097797-78097816 | None:intergenic | 25.0% |
| ! | AGTGAATAAAAACAAAGTGT+TGG | + | chr3.3:78099105-78099124 | MS.gene06788:CDS | 25.0% |
| ! | ATTGAGGAGATAAGTAATAA+TGG | + | chr3.3:78098284-78098303 | MS.gene06788:CDS | 25.0% |
| ! | GATCATAGTTCAAAGTTTAA+TGG | + | chr3.3:78098878-78098897 | MS.gene06788:CDS | 25.0% |
| ! | GCAGGAGAAAAATTAAATAA+TGG | + | chr3.3:78098689-78098708 | MS.gene06788:CDS | 25.0% |
| ! | TATAACAGAATACATGACAT+TGG | - | chr3.3:78097687-78097706 | None:intergenic | 25.0% |
| ! | TGAGAATTTCTATGAATATC+CGG | + | chr3.3:78097837-78097856 | MS.gene06788:intron | 25.0% |
| !! | AATTAGATTTTTCACCTTGA+AGG | - | chr3.3:78097491-78097510 | None:intergenic | 25.0% |
| !! | ACATTTAACTATCCGAATTT+TGG | - | chr3.3:78097397-78097416 | None:intergenic | 25.0% |
| !! | AGTAAAATTGAAGAGTACAA+TGG | - | chr3.3:78097527-78097546 | None:intergenic | 25.0% |
| !! | GAAATCACTGAAACTAATTT+TGG | + | chr3.3:78098407-78098426 | MS.gene06788:CDS | 25.0% |
| !! | TGTGACATACTCTTTTATAA+AGG | - | chr3.3:78099885-78099904 | None:intergenic | 25.0% |
| !!! | AAGATATTTTAATGCAATCG+CGG | + | chr3.3:78100257-78100276 | MS.gene06788:CDS | 25.0% |
| AACATATTTACCACCATTCA+AGG | - | chr3.3:78100187-78100206 | None:intergenic | 30.0% | |
| AATCCTGAAGTGGAAATTAT+TGG | + | chr3.3:78098521-78098540 | MS.gene06788:CDS | 30.0% | |
| ACATATTTACCACCATTCAA+GGG | - | chr3.3:78100186-78100205 | None:intergenic | 30.0% | |
| ACCTGTATAAATCTTCATGT+TGG | - | chr3.3:78099651-78099670 | None:intergenic | 30.0% | |
| ACTATGATCTCTTAATTCTG+TGG | - | chr3.3:78098867-78098886 | None:intergenic | 30.0% | |
| ATTACTGGAAACAATATAGC+AGG | + | chr3.3:78098671-78098690 | MS.gene06788:CDS | 30.0% | |
| ATTTGTTCATCTGATGAAGA+TGG | + | chr3.3:78098341-78098360 | MS.gene06788:CDS | 30.0% | |
| CATTTATGACAAGTGACAAA+AGG | - | chr3.3:78099829-78099848 | None:intergenic | 30.0% | |
| CTCTTGTAATAGTTTGACAT+TGG | + | chr3.3:78097620-78097639 | MS.gene06788:intron | 30.0% | |
| TACAGCTAAGAAACAAAGTT+TGG | + | chr3.3:78097944-78097963 | MS.gene06788:intron | 30.0% | |
| TAGTTAAATGTCCTAAATGC+CGG | + | chr3.3:78097406-78097425 | MS.gene06788:CDS | 30.0% | |
| TATATGAGTGAGGAAACAAA+TGG | + | chr3.3:78099355-78099374 | MS.gene06788:CDS | 30.0% | |
| TCAAAGTTTAATGGTGTTCT+TGG | + | chr3.3:78098887-78098906 | MS.gene06788:CDS | 30.0% | |
| TCCAACATGAAGATTTATAC+AGG | + | chr3.3:78099647-78099666 | MS.gene06788:CDS | 30.0% | |
| TTATAAAGGAGAAAATCTGC+AGG | - | chr3.3:78099871-78099890 | None:intergenic | 30.0% | |
| TTCATTACAAAGACCAAAAG+AGG | + | chr3.3:78098313-78098332 | MS.gene06788:CDS | 30.0% | |
| TTTCCAATAATTTCCACTTC+AGG | - | chr3.3:78098527-78098546 | None:intergenic | 30.0% | |
| ! | AAACAGATTCTGATTTTCAG+AGG | + | chr3.3:78099719-78099738 | MS.gene06788:CDS | 30.0% |
| ! | CTCAAGTTTTCATTGAAGAA+TGG | + | chr3.3:78099934-78099953 | MS.gene06788:CDS | 30.0% |
| ! | GAACAAATTAAGTCCTCTTT+TGG | - | chr3.3:78098329-78098348 | None:intergenic | 30.0% |
| ! | TTTGTTGTGTAAGAGAAAGA+AGG | - | chr3.3:78100158-78100177 | None:intergenic | 30.0% |
| !! | GAGTGTTATTTAGATGGAAA+TGG | + | chr3.3:78098119-78098138 | MS.gene06788:CDS | 30.0% |
| !! | TAATATGAAATGGGTTTTGC+AGG | - | chr3.3:78100087-78100106 | None:intergenic | 30.0% |
| !! | TCAAGAGAGTGTTATTTAGA+TGG | + | chr3.3:78098113-78098132 | MS.gene06788:CDS | 30.0% |
| !!! | ATGACATGGTTTTTTTCATG+TGG | - | chr3.3:78099073-78099092 | None:intergenic | 30.0% |
| !!! | TCATCAGTTTCATTTTTTCC+TGG | - | chr3.3:78099294-78099313 | None:intergenic | 30.0% |
| !!! | TTATGAAGAGTACCTTTTTG+TGG | - | chr3.3:78100369-78100388 | None:intergenic | 30.0% |
| AAATGCAAGCAATGAGATTG+TGG | + | chr3.3:78098829-78098848 | MS.gene06788:CDS | 35.0% | |
| ACAAGAAGCTCATATATCAC+AGG | + | chr3.3:78098938-78098957 | MS.gene06788:CDS | 35.0% | |
| ACACCAAGTAAAGTGATAAG+AGG | + | chr3.3:78100405-78100424 | MS.gene06788:CDS | 35.0% | |
| ACAGAATACATGACATTGGT+TGG | - | chr3.3:78097683-78097702 | None:intergenic | 35.0% | |
| ACCAAGTAAAGTGATAAGAG+GGG | + | chr3.3:78100407-78100426 | MS.gene06788:CDS | 35.0% | |
| AGGTACTCTTCATAAACTCA+TGG | + | chr3.3:78100374-78100393 | MS.gene06788:CDS | 35.0% | |
| CAACAAATTCATCCCTTGAA+TGG | + | chr3.3:78100171-78100190 | MS.gene06788:CDS | 35.0% | |
| CACCAAGTAAAGTGATAAGA+GGG | + | chr3.3:78100406-78100425 | MS.gene06788:CDS | 35.0% | |
| CCAGAATTAAAATCCTCTAG+TGG | - | chr3.3:78098590-78098609 | None:intergenic | 35.0% | |
| CCTATAGTATTCGATGAGAA+AGG | - | chr3.3:78099973-78099992 | None:intergenic | 35.0% | |
| CCTTTCTCATCGAATACTAT+AGG | + | chr3.3:78099970-78099989 | MS.gene06788:CDS | 35.0% | |
| CTTAAGGGACAAACATAACT+TGG | + | chr3.3:78099768-78099787 | MS.gene06788:CDS | 35.0% | |
| CTTGATCACTCTAGATGTAT+CGG | + | chr3.3:78099472-78099491 | MS.gene06788:CDS | 35.0% | |
| GAAATGTGGTAAATGTTCAG+AGG | + | chr3.3:78099909-78099928 | MS.gene06788:CDS | 35.0% | |
| GATGGAAATGGTGAATACAA+TGG | + | chr3.3:78098131-78098150 | MS.gene06788:CDS | 35.0% | |
| GCATATTGATAGAAAACGTC+AGG | + | chr3.3:78098046-78098065 | MS.gene06788:CDS | 35.0% | |
| GGAGTAGAAGACTTGAATAA+TGG | + | chr3.3:78098557-78098576 | MS.gene06788:CDS | 35.0% | |
| GGTAACAAGAATGATCTACA+TGG | - | chr3.3:78099582-78099601 | None:intergenic | 35.0% | |
| GGTACTCTTCATAAACTCAT+GGG | + | chr3.3:78100375-78100394 | MS.gene06788:CDS | 35.0% | |
| GTAAATGTTGTTGGACAACA+TGG | - | chr3.3:78097788-78097807 | None:intergenic | 35.0% | |
| GTAAGGTGGTTACCAAAATT+CGG | + | chr3.3:78097382-78097401 | MS.gene06788:CDS | 35.0% | |
| GTTTCAGTGATTTCCATTTC+AGG | - | chr3.3:78098401-78098420 | None:intergenic | 35.0% | |
| TACCTAAATTGTCACTCAGA+AGG | + | chr3.3:78098213-78098232 | MS.gene06788:CDS | 35.0% | |
| TAGTTGACATGAGATACTGA+TGG | - | chr3.3:78100051-78100070 | None:intergenic | 35.0% | |
| TCACAGTGAGTGATGTTATT+TGG | - | chr3.3:78098263-78098282 | None:intergenic | 35.0% | |
| TGTATCGGAAGATGTAATCA+TGG | + | chr3.3:78099487-78099506 | MS.gene06788:CDS | 35.0% | |
| TGTGATATATGAGCTTCTTG+TGG | - | chr3.3:78098939-78098958 | None:intergenic | 35.0% | |
| TGTGGTGAGGAAATACTTAA+GGG | + | chr3.3:78099753-78099772 | MS.gene06788:CDS | 35.0% | |
| TTGTACACAGAATATCCTTG+AGG | - | chr3.3:78097447-78097466 | None:intergenic | 35.0% | |
| ! | ATAGCTGATTGGTCATTGTT+AGG | - | chr3.3:78098761-78098780 | None:intergenic | 35.0% |
| ! | ATGACAAATCAGCTCTGATA+GGG | + | chr3.3:78098369-78098388 | MS.gene06788:CDS | 35.0% |
| ! | TATGACAAATCAGCTCTGAT+AGG | + | chr3.3:78098368-78098387 | MS.gene06788:CDS | 35.0% |
| ! | TGGAGCTGATTTATCACTAT+TGG | - | chr3.3:78098627-78098646 | None:intergenic | 35.0% |
| ! | TGTAACTGGCTTCTCTTTAT+TGG | - | chr3.3:78098492-78098511 | None:intergenic | 35.0% |
| !! | ATTCTGATTTTCAGAGGCAT+AGG | + | chr3.3:78099725-78099744 | MS.gene06788:CDS | 35.0% |
| !! | TGCATTGATTTCTTGCATAC+TGG | - | chr3.3:78097985-78098004 | None:intergenic | 35.0% |
| !! | TTCTGATTTTCAGAGGCATA+GGG | + | chr3.3:78099726-78099745 | MS.gene06788:CDS | 35.0% |
| !!! | CCACTAGAGGATTTTAATTC+TGG | + | chr3.3:78098587-78098606 | MS.gene06788:CDS | 35.0% |
| AAAGAGAAGCCAGTTACAGA+AGG | + | chr3.3:78098494-78098513 | MS.gene06788:CDS | 40.0% | |
| AACCTTGAAGGGGAAATTAC+TGG | + | chr3.3:78098656-78098675 | MS.gene06788:CDS | 40.0% | |
| AATGGAAAATGGCCACAAGA+GGG | + | chr3.3:78098707-78098726 | MS.gene06788:CDS | 40.0% | |
| ACAAATGGAAGAGTTTCTGC+TGG | + | chr3.3:78099370-78099389 | MS.gene06788:CDS | 40.0% | |
| ACGGATACAGATGAATCAAC+TGG | + | chr3.3:78100285-78100304 | MS.gene06788:CDS | 40.0% | |
| AGAAGAACTGGAAAGTGAGT+TGG | + | chr3.3:78098187-78098206 | MS.gene06788:CDS | 40.0% | |
| AGAAGAATCTGCTAAGACAC+GGG | - | chr3.3:78099614-78099633 | None:intergenic | 40.0% | |
| AGAGGATACCAAATCTGAAG+TGG | + | chr3.3:78098781-78098800 | MS.gene06788:CDS | 40.0% | |
| AGTGATAAATCAGCTCCAGT+TGG | + | chr3.3:78098629-78098648 | MS.gene06788:CDS | 40.0% | |
| ATATGAGCTTCTTGTGGTTG+AGG | - | chr3.3:78098933-78098952 | None:intergenic | 40.0% | |
| ATCAAATGGAGTGCATGATG+AGG | + | chr3.3:78099228-78099247 | MS.gene06788:CDS | 40.0% | |
| CAAATTCATCCCTTGAATGG+TGG | + | chr3.3:78100174-78100193 | MS.gene06788:CDS | 40.0% | |
| CAATGACCAATCAGCTATAG+AGG | + | chr3.3:78098763-78098782 | MS.gene06788:CDS | 40.0% | |
| CACAACATGGTAATTCACGT+TGG | + | chr3.3:78099134-78099153 | MS.gene06788:CDS | 40.0% | |
| CAGGAAATTGTCAGCAGAAA+AGG | + | chr3.3:78100332-78100351 | MS.gene06788:CDS | 40.0% | |
| CAGTGATTCAGAACAGAAAG+AGG | - | chr3.3:78097899-78097918 | None:intergenic | 40.0% | |
| CTGTGGTGAGGAAATACTTA+AGG | + | chr3.3:78099752-78099771 | MS.gene06788:CDS | 40.0% | |
| CTTTCATAGCCTGATCTGTA+AGG | - | chr3.3:78099199-78099218 | None:intergenic | 40.0% | |
| GAAATTGTCAGCAGAAAAGG+AGG | + | chr3.3:78100335-78100354 | MS.gene06788:CDS | 40.0% | |
| GAGAAGAATCTGCTAAGACA+CGG | - | chr3.3:78099615-78099634 | None:intergenic | 40.0% | |
| GGAAATGGTGAATACAATGG+CGG | + | chr3.3:78098134-78098153 | MS.gene06788:CDS | 40.0% | |
| GGAATGACCAGAAAAGGTAA+AGG | + | chr3.3:78098992-78099011 | MS.gene06788:CDS | 40.0% | |
| GGATATTCTGTGTACAAGTG+TGG | + | chr3.3:78097450-78097469 | MS.gene06788:CDS | 40.0% | |
| GTATGTCACAAGCTGAAATG+TGG | + | chr3.3:78099895-78099914 | MS.gene06788:CDS | 40.0% | |
| GTGTTGGACAATACACAACA+TGG | + | chr3.3:78099121-78099140 | MS.gene06788:CDS | 40.0% | |
| GTTATTTGGACCACCTTTGT+TGG | - | chr3.3:78098249-78098268 | None:intergenic | 40.0% | |
| TAATGGAAAATGGCCACAAG+AGG | + | chr3.3:78098706-78098725 | MS.gene06788:CDS | 40.0% | |
| TAATGGCAATTTGCCACTAG+AGG | + | chr3.3:78098574-78098593 | MS.gene06788:CDS | 40.0% | |
| TACAGATCAGGCTATGAAAG+TGG | + | chr3.3:78099199-78099218 | MS.gene06788:CDS | 40.0% | |
| TATTCTGTGTACAAGTGTGG+TGG | + | chr3.3:78097453-78097472 | MS.gene06788:CDS | 40.0% | |
| TCAAATGGAGTGCATGATGA+GGG | + | chr3.3:78099229-78099248 | MS.gene06788:CDS | 40.0% | |
| TCATCATGCACTCCATTTGA+TGG | - | chr3.3:78099229-78099248 | None:intergenic | 40.0% | |
| TCATGTTGGAAATGAACACG+TGG | - | chr3.3:78099637-78099656 | None:intergenic | 40.0% | |
| TCCTCGGAAAGATAGTTTGA+AGG | + | chr3.3:78098073-78098092 | MS.gene06788:CDS | 40.0% | |
| TCTGCTGGTGTATCTTACAA+GGG | + | chr3.3:78099385-78099404 | MS.gene06788:CDS | 40.0% | |
| TCTTCGTCTGTGAACTTGAA+TGG | - | chr3.3:78098170-78098189 | None:intergenic | 40.0% | |
| TGCCTTCTGAGTGACAATTT+AGG | - | chr3.3:78098218-78098237 | None:intergenic | 40.0% | |
| TGGTATCCTCTATAGCTGAT+TGG | - | chr3.3:78098772-78098791 | None:intergenic | 40.0% | |
| TGTTGTGTCCACTTCAGATT+TGG | - | chr3.3:78098792-78098811 | None:intergenic | 40.0% | |
| TTCCAGTAATTTCCCCTTCA+AGG | - | chr3.3:78098661-78098680 | None:intergenic | 40.0% | |
| TTCTGCTGGTGTATCTTACA+AGG | + | chr3.3:78099384-78099403 | MS.gene06788:CDS | 40.0% | |
| TTGAGCTAGGAGAGACATTT+GGG | - | chr3.3:78100212-78100231 | None:intergenic | 40.0% | |
| TTGCTAATAGCTCCTCGTAT+GGG | + | chr3.3:78099017-78099036 | MS.gene06788:CDS | 40.0% | |
| TTTCCTGGTTTCAGACATAC+TGG | - | chr3.3:78100319-78100338 | None:intergenic | 40.0% | |
| TTTGCCTTGAATGTTGAGCT+AGG | - | chr3.3:78100225-78100244 | None:intergenic | 40.0% | |
| TTTGGAAACTTGTCGCTAGA+GGG | + | chr3.3:78098425-78098444 | MS.gene06788:CDS | 40.0% | |
| ! | CTTGTTGCTTCAGCTGAATA+AGG | - | chr3.3:78099550-78099569 | None:intergenic | 40.0% |
| ! | CTTTTCTGCTGACAATTTCC+TGG | - | chr3.3:78100334-78100353 | None:intergenic | 40.0% |
| ! | GAAGAGCAACAATTTTGCAC+TGG | - | chr3.3:78099679-78099698 | None:intergenic | 40.0% |
| ! | GCAACAATTTTGCACTGGAT+AGG | - | chr3.3:78099674-78099693 | None:intergenic | 40.0% |
| ! | GTTGATTCATCTGTATCCGT+TGG | - | chr3.3:78100285-78100304 | None:intergenic | 40.0% |
| ! | TGACAAATCAGCTCTGATAG+GGG | + | chr3.3:78098370-78098389 | MS.gene06788:CDS | 40.0% |
| !! | GGTATTGGTATGCAGAACTA+CGG | - | chr3.3:78099414-78099433 | None:intergenic | 40.0% |
| !! | TCTGTTTCACTGAAGCATTG+TGG | - | chr3.3:78099706-78099725 | None:intergenic | 40.0% |
| !! | TTTTGGAAACTTGTCGCTAG+AGG | + | chr3.3:78098424-78098443 | MS.gene06788:CDS | 40.0% |
| !!! | GAGAATGGTTTTGAAGTTGC+AGG | + | chr3.3:78099312-78099331 | MS.gene06788:CDS | 40.0% |
| !!! | TGAAGAGTACCTTTTTGTGG+AGG | - | chr3.3:78100366-78100385 | None:intergenic | 40.0% |
| AATGCTTACACCGTTGCTGA+AGG | + | chr3.3:78098971-78098990 | MS.gene06788:CDS | 45.0% | |
| ACAGAATATCCTTGAGGCTC+TGG | - | chr3.3:78097441-78097460 | None:intergenic | 45.0% | |
| CAAGAAATCAATGCAGCTCC+TGG | + | chr3.3:78097990-78098009 | MS.gene06788:CDS | 45.0% | |
| CAAGACTCGCTATATGAGTG+AGG | + | chr3.3:78099345-78099364 | MS.gene06788:CDS | 45.0% | |
| CATACGAGGAGCTATTAGCA+AGG | - | chr3.3:78099018-78099037 | None:intergenic | 45.0% | |
| CATAGCCATGACCTTCATGA+GGG | + | chr3.3:78099433-78099452 | MS.gene06788:CDS | 45.0% | |
| CATCACTCACTGTGAGATTG+AGG | + | chr3.3:78098268-78098287 | MS.gene06788:CDS | 45.0% | |
| CTAAGACACGGGAACAACAA+TGG | - | chr3.3:78099603-78099622 | None:intergenic | 45.0% | |
| CTCTCCTAGCTCAACATTCA+AGG | + | chr3.3:78100218-78100237 | MS.gene06788:CDS | 45.0% | |
| CTGCTGGTGTATCTTACAAG+GGG | + | chr3.3:78099386-78099405 | MS.gene06788:CDS | 45.0% | |
| CTGTGCTGTCTTTCATGACA+TGG | - | chr3.3:78099087-78099106 | None:intergenic | 45.0% | |
| CTTGCTAATAGCTCCTCGTA+TGG | + | chr3.3:78099016-78099035 | MS.gene06788:CDS | 45.0% | |
| GAAAACGTCAGGTTCTTCCT+CGG | + | chr3.3:78098057-78098076 | MS.gene06788:CDS | 45.0% | |
| GAAGGTCATGGCTATGGTAT+TGG | - | chr3.3:78099429-78099448 | None:intergenic | 45.0% | |
| GAGAAAACCTTCCCTCATGA+AGG | - | chr3.3:78099447-78099466 | None:intergenic | 45.0% | |
| GAGGTAAAGCCTCCACAAAA+AGG | + | chr3.3:78100354-78100373 | MS.gene06788:CDS | 45.0% | |
| GCCCCTCTTATCACTTTACT+TGG | - | chr3.3:78100411-78100430 | None:intergenic | 45.0% | |
| GCCTTCAAACTATCTTTCCG+AGG | - | chr3.3:78098077-78098096 | None:intergenic | 45.0% | |
| GCTGAAGGAATGACCAGAAA+AGG | + | chr3.3:78098986-78099005 | MS.gene06788:CDS | 45.0% | |
| GGATTTGCACCTTCTGTAAC+TGG | - | chr3.3:78098506-78098525 | None:intergenic | 45.0% | |
| GTTCACAGACGAAGAAGAAC+TGG | + | chr3.3:78098175-78098194 | MS.gene06788:CDS | 45.0% | |
| GTTGAGCTAGGAGAGACATT+TGG | - | chr3.3:78100213-78100232 | None:intergenic | 45.0% | |
| TCGAGAATGCCTTACAGATC+AGG | + | chr3.3:78099187-78099206 | MS.gene06788:CDS | 45.0% | |
| TCTGGTCATTCCTTCAGCAA+CGG | - | chr3.3:78098984-78099003 | None:intergenic | 45.0% | |
| TGCTAATAGCTCCTCGTATG+GGG | + | chr3.3:78099018-78099037 | MS.gene06788:CDS | 45.0% | |
| ! | ACAAGATCCGATGCTTTTCC+AGG | - | chr3.3:78098011-78098030 | None:intergenic | 45.0% |
| ! | AGAAGGTGCAAATCCTGAAG+TGG | + | chr3.3:78098511-78098530 | MS.gene06788:CDS | 45.0% |
| ! | AGCAAGGCCTTTACCTTTTC+TGG | - | chr3.3:78099002-78099021 | None:intergenic | 45.0% |
| ! | AGGCATAGAGTGTCCAACAA+AGG | + | chr3.3:78098233-78098252 | MS.gene06788:CDS | 45.0% |
| ! | AGTTGGTACGAACCTTGAAG+GGG | + | chr3.3:78098646-78098665 | MS.gene06788:CDS | 45.0% |
| ! | CAGTTGGTACGAACCTTGAA+GGG | + | chr3.3:78098645-78098664 | MS.gene06788:CDS | 45.0% |
| ! | CATAGAGTGTCCAACAAAGG+TGG | + | chr3.3:78098236-78098255 | MS.gene06788:CDS | 45.0% |
| ! | GATCTGTAAGGCATTCTCGA+TGG | - | chr3.3:78099187-78099206 | None:intergenic | 45.0% |
| ! | TCTGAAGTGGACACAACAGA+AGG | + | chr3.3:78098794-78098813 | MS.gene06788:CDS | 45.0% |
| ! | TGGGTTTTGCAGGTGAATAC+TGG | - | chr3.3:78100077-78100096 | None:intergenic | 45.0% |
| !!! | GCATCGGATCTTGTTTTTGC+AGG | + | chr3.3:78098017-78098036 | MS.gene06788:CDS | 45.0% |
| AAATGGCCACAAGAGGGAGA+AGG | + | chr3.3:78098713-78098732 | MS.gene06788:CDS | 50.0% | |
| AATCTGCAGGTAGCTGAAGC+AGG | - | chr3.3:78099858-78099877 | None:intergenic | 50.0% | |
| ACCTTCCCTCATGAAGGTCA+TGG | - | chr3.3:78099441-78099460 | None:intergenic | 50.0% | |
| CAACTTCTTCCAGAGCCTCA+AGG | + | chr3.3:78097429-78097448 | MS.gene06788:CDS | 50.0% | |
| CACTAACCACCTCGCTTCTA+CGG | - | chr3.3:78100017-78100036 | None:intergenic | 50.0% | |
| CCATAGCCATGACCTTCATG+AGG | + | chr3.3:78099432-78099451 | MS.gene06788:CDS | 50.0% | |
| CCTCATGAAGGTCATGGCTA+TGG | - | chr3.3:78099435-78099454 | None:intergenic | 50.0% | |
| CCTGGTTTCAGACATACTGG+AGG | - | chr3.3:78100316-78100335 | None:intergenic | 50.0% | |
| CCTTCAAGGTTCGTACCAAC+TGG | - | chr3.3:78098647-78098666 | None:intergenic | 50.0% | |
| CGAGTACTTATGCCTTTGGC+GGG | - | chr3.3:78099521-78099540 | None:intergenic | 50.0% | |
| GAAAGTGGCAGGCCATCAAA+TGG | + | chr3.3:78099214-78099233 | MS.gene06788:CDS | 50.0% | |
| GATAGGGGACAGACCTGAAA+TGG | + | chr3.3:78098385-78098404 | MS.gene06788:CDS | 50.0% | |
| GATCAGGCTATGAAAGTGGC+AGG | + | chr3.3:78099203-78099222 | MS.gene06788:CDS | 50.0% | |
| GCGAGTACTTATGCCTTTGG+CGG | - | chr3.3:78099522-78099541 | None:intergenic | 50.0% | |
| GGAAGAAGTTGCCGGCATTT+AGG | - | chr3.3:78097420-78097439 | None:intergenic | 50.0% | |
| TAAGCGACATCACAAGCCAG+TGG | + | chr3.3:78099792-78099811 | MS.gene06788:CDS | 50.0% | |
| TAATGCAATCGCGGCTCCAA+CGG | + | chr3.3:78100266-78100285 | MS.gene06788:CDS | 50.0% | |
| TCCGCGAGTACTTATGCCTT+TGG | - | chr3.3:78099525-78099544 | None:intergenic | 50.0% | |
| TGTTCCAAGATCCCCATACG+AGG | - | chr3.3:78099032-78099051 | None:intergenic | 50.0% | |
| ! | CCAGTTGGTACGAACCTTGA+AGG | + | chr3.3:78098644-78098663 | MS.gene06788:CDS | 50.0% |
| ! | CCTCCAGTATGTCTGAAACC+AGG | + | chr3.3:78100313-78100332 | MS.gene06788:CDS | 50.0% |
| ! | GCCAAAGGCATAAGTACTCG+CGG | + | chr3.3:78099521-78099540 | MS.gene06788:CDS | 50.0% |
| ! | TGCAGCTCCTGGAAAAGCAT+CGG | + | chr3.3:78098001-78098020 | MS.gene06788:CDS | 50.0% |
| !! | GCAGATGCGGTGTTGATTTC+TGG | + | chr3.3:78098449-78098468 | MS.gene06788:CDS | 50.0% |
| !! | GTGTACAAGTGTGGTGGATG+TGG | + | chr3.3:78097459-78097478 | MS.gene06788:CDS | 50.0% |
| AGCTCCTCGTATGGGGATCT+TGG | + | chr3.3:78099025-78099044 | MS.gene06788:CDS | 55.0% | |
| ATGGAATTGCGTCCCGCCAA+AGG | + | chr3.3:78099506-78099525 | MS.gene06788:CDS | 55.0% | |
| CGTAGAAGCGAGGTGGTTAG+TGG | + | chr3.3:78100015-78100034 | MS.gene06788:CDS | 55.0% | |
| CTACGGTGAAGCTCACGAGA+TGG | - | chr3.3:78100000-78100019 | None:intergenic | 55.0% | |
| GCCATGACCTTCATGAGGGA+AGG | + | chr3.3:78099437-78099456 | MS.gene06788:CDS | 55.0% | |
| TCCTCTCCTTCTCCCTCTTG+TGG | - | chr3.3:78098722-78098741 | None:intergenic | 55.0% | |
| TCTTTCACACGACTCGCGTG+AGG | + | chr3.3:78099261-78099280 | MS.gene06788:CDS | 55.0% | |
| TGAGCTTCACCGTAGAAGCG+AGG | + | chr3.3:78100005-78100024 | MS.gene06788:CDS | 55.0% | |
| ! | TCAGAGGCATAGGGCTACTG+TGG | + | chr3.3:78099735-78099754 | MS.gene06788:CDS | 55.0% |
| !! | GAGGCTCTGGAAGAAGTTGC+CGG | - | chr3.3:78097428-78097447 | None:intergenic | 55.0% |
| !! | GGATGTGGCACTGACCTTCA+AGG | + | chr3.3:78097474-78097493 | MS.gene06788:CDS | 55.0% |
| AAAGGAGCTCCACCTGCCAC+TGG | - | chr3.3:78099811-78099830 | None:intergenic | 60.0% | |
| CATCACAAGCCAGTGGCAGG+TGG | + | chr3.3:78099799-78099818 | MS.gene06788:CDS | 60.0% | |
| CGACATCACAAGCCAGTGGC+AGG | + | chr3.3:78099796-78099815 | MS.gene06788:CDS | 60.0% | |
| GCCACAAGAGGGAGAAGGAG+AGG | + | chr3.3:78098718-78098737 | MS.gene06788:CDS | 60.0% | |
| GCTTCACCGTAGAAGCGAGG+TGG | + | chr3.3:78100008-78100027 | MS.gene06788:CDS | 60.0% | |
| GGCATAGGGCTACTGTGGTG+AGG | + | chr3.3:78099740-78099759 | MS.gene06788:CDS | 60.0% | |
| GTCGCTAGAGGGAGCAGATG+CGG | + | chr3.3:78098436-78098455 | MS.gene06788:CDS | 60.0% | |
| CTCGCGTGAGGACACTGACC+AGG | + | chr3.3:78099273-78099292 | MS.gene06788:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 78097375 | 78100440 | 78097375 | ID=MS.gene06788 |
| chr3.3 | mRNA | 78097375 | 78100440 | 78097375 | ID=MS.gene06788.t1;Parent=MS.gene06788 |
| chr3.3 | exon | 78097375 | 78097495 | 78097375 | ID=MS.gene06788.t1.exon1;Parent=MS.gene06788.t1 |
| chr3.3 | CDS | 78097375 | 78097495 | 78097375 | ID=cds.MS.gene06788.t1;Parent=MS.gene06788.t1 |
| chr3.3 | exon | 78097949 | 78100440 | 78097949 | ID=MS.gene06788.t1.exon2;Parent=MS.gene06788.t1 |
| chr3.3 | CDS | 78097949 | 78100440 | 78097949 | ID=cds.MS.gene06788.t1;Parent=MS.gene06788.t1 |
| Gene Sequence |
| Protein sequence |
