Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068018.t1 | XP_003608398.2 | 98.2 | 166 | 3 | 0 | 150 | 315 | 1 | 166 | 3.10E-84 | 322 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068018.t1 | A0A072UQ66 | 98.2 | 166 | 3 | 0 | 150 | 315 | 1 | 166 | 2.2e-84 | 322.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene068018 | 0.839123 | 1.91E-57 | -1.69E-46 |
| MS.gene051233 | MS.gene068018 | 0.803165 | 3.97E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene068018 | 0.805123 | 1.55E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene068018 | 0.808242 | 3.41E-50 | -1.69E-46 |
| MS.gene055424 | MS.gene068018 | 0.804807 | 1.81E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene068018 | 0.801454 | 8.94E-49 | -1.69E-46 |
| MS.gene058074 | MS.gene068018 | 0.835127 | 2.01E-56 | -1.69E-46 |
| MS.gene059146 | MS.gene068018 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene059171 | MS.gene068018 | 0.821149 | 4.71E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068018.t1 | MTR_4g093680 | 98.193 | 166 | 3 | 0 | 150 | 315 | 1 | 166 | 1.17e-118 | 338 |
| MS.gene068018.t1 | MTR_4g093680 | 98.765 | 162 | 2 | 0 | 154 | 315 | 1 | 162 | 6.78e-116 | 331 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068018.t1 | AT3G15351 | 64.848 | 165 | 58 | 0 | 150 | 314 | 1 | 165 | 3.40e-75 | 228 |
| MS.gene068018.t1 | AT3G15351 | 64.848 | 165 | 58 | 0 | 150 | 314 | 1 | 165 | 3.40e-75 | 228 |
| MS.gene068018.t1 | AT3G15351 | 67.883 | 137 | 44 | 0 | 178 | 314 | 1 | 137 | 3.71e-66 | 204 |
| MS.gene068018.t1 | AT3G15351 | 67.883 | 137 | 44 | 0 | 178 | 314 | 1 | 137 | 3.71e-66 | 204 |
| MS.gene068018.t1 | AT3G15351 | 67.883 | 137 | 44 | 0 | 178 | 314 | 1 | 137 | 3.71e-66 | 204 |
| MS.gene068018.t1 | AT3G15351 | 65.517 | 116 | 40 | 0 | 150 | 265 | 1 | 116 | 6.74e-51 | 165 |
| MS.gene068018.t1 | AT3G15351 | 65.517 | 116 | 40 | 0 | 150 | 265 | 1 | 116 | 6.74e-51 | 165 |
Find 88 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTTTGGTTTGTCATTTA+AGG | 0.078027 | 4.3:-20938936 | None:intergenic |
| CTCTTCCAATTGATTGAATT+TGG | 0.153302 | 4.3:-20934618 | None:intergenic |
| TCAATAATGAAGGGAGTTTC+AGG | 0.209420 | 4.3:+20937729 | MS.gene068018:CDS |
| GAGTTTCTCTTCATCAAATA+TGG | 0.260234 | 4.3:+20936174 | MS.gene068018:CDS |
| ACTAGTGTTCCATCTCCTTT+TGG | 0.261648 | 4.3:+20937705 | MS.gene068018:CDS |
| AACCGAGGCGCGTCTATTGC+TGG | 0.297411 | 4.3:+20933771 | MS.gene068018:CDS |
| GTCTCTATTTGCTTCTGTTT+CGG | 0.303300 | 4.3:+20936048 | MS.gene068018:CDS |
| ACTTACTGCGCTAAGGAAAA+AGG | 0.313466 | 4.3:+20937668 | MS.gene068018:CDS |
| AAAGTAGAAGCTGCAGGCTT+TGG | 0.324527 | 4.3:+20934845 | MS.gene068018:CDS |
| CCATGCTGCTCATACTATAT+TGG | 0.329660 | 4.3:+20937866 | MS.gene068018:CDS |
| ATTCTCTAGTCAGCTCCCTC+TGG | 0.367080 | 4.3:+20934530 | MS.gene068018:intron |
| TCAAAAGAAATTAACAAAGT+TGG | 0.373892 | 4.3:+20936216 | MS.gene068018:CDS |
| GAGTCAGCATCTTTGCGCTT+GGG | 0.374866 | 4.3:+20933723 | MS.gene068018:CDS |
| GGCTACCAAATTCAATCAAT+TGG | 0.382974 | 4.3:+20934613 | MS.gene068018:CDS |
| GAGGAGGAGGCAGAGGAGAT+TGG | 0.384611 | 4.3:+20933399 | MS.gene068018:CDS |
| CCCACAAACAGATCCGTTCC+TGG | 0.403188 | 4.3:-20937834 | None:intergenic |
| GCTCATACTATATTGGAAAC+AGG | 0.413226 | 4.3:+20937873 | MS.gene068018:CDS |
| AAGTAGAAGCTGCAGGCTTT+GGG | 0.413563 | 4.3:+20934846 | MS.gene068018:CDS |
| GTAGCATATCCTGGTATTGC+TGG | 0.421370 | 4.3:-20933357 | None:intergenic |
| CAGACGTGGACGATGTTTCC+AGG | 0.423557 | 4.3:+20937816 | MS.gene068018:CDS |
| TTCTCTAGTCAGCTCCCTCT+GGG | 0.423843 | 4.3:+20934531 | MS.gene068018:intron |
| TCAAGCAGAGCTAGACTTTG+AGG | 0.425248 | 4.3:+20938811 | MS.gene068018:CDS |
| AGGGACCGGCTCAAGACCTT+TGG | 0.427156 | 4.3:+20937749 | MS.gene068018:CDS |
| GGAGTCAGCATCTTTGCGCT+TGG | 0.435512 | 4.3:+20933722 | MS.gene068018:intron |
| CCAGGAACGGATCTGTTTGT+GGG | 0.437602 | 4.3:+20937834 | MS.gene068018:CDS |
| GGACAAATCGTATCTTATAT+CGG | 0.442490 | 4.3:+20938859 | MS.gene068018:CDS |
| CTGAAAGACAAGAAGCTTGA+AGG | 0.448939 | 4.3:+20934818 | MS.gene068018:CDS |
| TTGATAAGGTTCAAAATTGA+AGG | 0.451336 | 4.3:+20934791 | MS.gene068018:intron |
| AGAATGATAAGTTGAGGAAT+GGG | 0.455119 | 4.3:+20937634 | MS.gene068018:CDS |
| ACGGTGGTCCGGTGGTGGTT+CGG | 0.455201 | 4.3:-20934570 | None:intergenic |
| AGCACAAACGCATCTTACTT+TGG | 0.466075 | 4.3:-20938950 | None:intergenic |
| GAGAATGATAAGTTGAGGAA+TGG | 0.468450 | 4.3:+20937633 | MS.gene068018:CDS |
| TCCAGGAACGGATCTGTTTG+TGG | 0.468587 | 4.3:+20937833 | MS.gene068018:CDS |
| TGAGAGTAACATGAATGATT+TGG | 0.474672 | 4.3:+20933324 | None:intergenic |
| TGCTGATAACGAAGAGTATG+AGG | 0.475757 | 4.3:+20933380 | MS.gene068018:CDS |
| AGAGTATGAGGAGGAGGCAG+AGG | 0.477913 | 4.3:+20933392 | MS.gene068018:CDS |
| CCCTTCATTATTGATCCAAA+AGG | 0.482045 | 4.3:-20937720 | None:intergenic |
| AATTGAAATTACCTGATGTC+GGG | 0.487437 | 4.3:-20936266 | None:intergenic |
| ACAAGTGATTTAAGCACTCC+TGG | 0.488807 | 4.3:-20938911 | None:intergenic |
| GCAGAGGAGATTGGTGTTTG+AGG | 0.489110 | 4.3:+20933408 | MS.gene068018:CDS |
| AAATGACGGTGGTCCGGTGG+TGG | 0.490194 | 4.3:-20934575 | None:intergenic |
| ATTATTGATCCAAAAGGAGA+TGG | 0.506007 | 4.3:-20937714 | None:intergenic |
| AGAAGAGGGAGGCGCCCAGA+GGG | 0.506512 | 4.3:-20934545 | None:intergenic |
| TCTTCTCACCGAACCACCAC+CGG | 0.509896 | 4.3:+20934562 | MS.gene068018:CDS |
| AGTCAGCATCTTTGCGCTTG+GGG | 0.517017 | 4.3:+20933724 | MS.gene068018:CDS |
| GACCACCGTCATTTCACCAC+TGG | 0.517861 | 4.3:+20934584 | MS.gene068018:CDS |
| GGGCAATGACGCAGCTAATG+AGG | 0.522867 | 4.3:+20933744 | MS.gene068018:CDS |
| AACCAGCAATAGACGCGCCT+CGG | 0.526622 | 4.3:-20933773 | None:intergenic |
| TCATTTCACCACTGGATCAC+CGG | 0.531159 | 4.3:+20934592 | MS.gene068018:CDS |
| TAACGAAGAGTATGAGGAGG+AGG | 0.535210 | 4.3:+20933386 | MS.gene068018:CDS |
| GTGGTGGTTCGGTGAGAAGA+GGG | 0.538086 | 4.3:-20934559 | None:intergenic |
| AAATTGAAATTACCTGATGT+CGG | 0.539059 | 4.3:-20936267 | None:intergenic |
| GTGGTGAAATGACGGTGGTC+CGG | 0.541158 | 4.3:-20934581 | None:intergenic |
| GAGAAGAGGGAGGCGCCCAG+AGG | 0.541203 | 4.3:-20934546 | None:intergenic |
| TCGTATCTTATATCGGAGAC+AGG | 0.543379 | 4.3:+20938866 | MS.gene068018:CDS |
| ATGAAGGGAGTTTCAGGGAC+CGG | 0.544514 | 4.3:+20937735 | MS.gene068018:CDS |
| GGAGGAAAAGTAGAAGCTGC+AGG | 0.554496 | 4.3:+20934839 | MS.gene068018:CDS |
| AATTGATTGAATTTGGTAGC+CGG | 0.554956 | 4.3:-20934611 | None:intergenic |
| CTCGCCGACTTGATAAGTCC+AGG | 0.558678 | 4.3:+20938893 | MS.gene068018:CDS |
| GTCTGAGTACCAGCAATACC+AGG | 0.558885 | 4.3:+20933348 | MS.gene068018:CDS |
| GCATCAAGAGAAGCTAATAC+AGG | 0.566410 | 4.3:+20934868 | MS.gene068018:CDS |
| TTATCAGCAGTAGCATATCC+TGG | 0.572062 | 4.3:-20933366 | None:intergenic |
| ATAGTATGAGCAGCATGGAA+TGG | 0.572079 | 4.3:-20937861 | None:intergenic |
| CAATAATGAAGGGAGTTTCA+GGG | 0.573409 | 4.3:+20937730 | MS.gene068018:CDS |
| GGTGGTGGTTCGGTGAGAAG+AGG | 0.574140 | 4.3:-20934560 | None:intergenic |
| CTCAAGACCTTTGGTACAAG+AGG | 0.575916 | 4.3:+20937758 | MS.gene068018:CDS |
| GAGAAGCACTTACTGCGCTA+AGG | 0.586980 | 4.3:+20937661 | MS.gene068018:CDS |
| GTACACACCTCTTGTACCAA+AGG | 0.594929 | 4.3:-20937765 | None:intergenic |
| GTGAAATGACGGTGGTCCGG+TGG | 0.604453 | 4.3:-20934578 | None:intergenic |
| AAAAGAGTCATGGTTACCAC+AGG | 0.607673 | 4.3:-20937790 | None:intergenic |
| TTGTACCAAAGGTCTTGAGC+CGG | 0.607952 | 4.3:-20937754 | None:intergenic |
| GTGGACGATGTTTCCAGGAA+CGG | 0.618017 | 4.3:+20937821 | MS.gene068018:CDS |
| GTGATCCAGTGGTGAAATGA+CGG | 0.618475 | 4.3:-20934589 | None:intergenic |
| CCAATATAGTATGAGCAGCA+TGG | 0.625866 | 4.3:-20937866 | None:intergenic |
| AAAGACAAGAAGCTTGAAGG+AGG | 0.625936 | 4.3:+20934821 | MS.gene068018:CDS |
| ACGTCTGCTCAAAAGAGTCA+TGG | 0.629211 | 4.3:-20937800 | None:intergenic |
| GTGGTTCGGTGAGAAGAGGG+AGG | 0.629968 | 4.3:-20934556 | None:intergenic |
| ATTGGAAGAGTATTGAAGCA+TGG | 0.632434 | 4.3:+20934631 | MS.gene068018:CDS |
| AGAGTCATGGTTACCACAGG+TGG | 0.635237 | 4.3:-20937787 | None:intergenic |
| CAAGAGGTGTGTACCACCTG+TGG | 0.640714 | 4.3:+20937774 | MS.gene068018:CDS |
| GAAACTACAGAGCATTGTGA+AGG | 0.641865 | 4.3:+20938838 | MS.gene068018:CDS |
| TGGTTGAGAATGATAAGTTG+AGG | 0.646660 | 4.3:+20937628 | MS.gene068018:CDS |
| ACACAGAGGCTGCACAGTCA+AGG | 0.647492 | 4.3:-20936074 | None:intergenic |
| CACTCCTGGACTTATCAAGT+CGG | 0.656025 | 4.3:-20938897 | None:intergenic |
| TTTGGTAGCCGGTGATCCAG+TGG | 0.676317 | 4.3:-20934600 | None:intergenic |
| AGCTAATGAGGTTCTAACCG+AGG | 0.679245 | 4.3:+20933756 | MS.gene068018:CDS |
| TGATAACGAAGAGTATGAGG+AGG | 0.685392 | 4.3:+20933383 | MS.gene068018:CDS |
| ATCCAGTGGTGAAATGACGG+TGG | 0.733113 | 4.3:-20934586 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATTAATTTACTTC+TGG | + | chr4.3:20934172-20934191 | MS.gene068018:intron | 10.0% |
| !!! | AAATCAAAAATATATTTTAC+AGG | + | chr4.3:20934328-20934347 | MS.gene068018:intron | 10.0% |
| !!! | AATCAAAAATATATTTTACA+GGG | + | chr4.3:20934329-20934348 | MS.gene068018:intron | 10.0% |
| !!! | TTGTTTTTTTACAAAAATTT+TGG | - | chr4.3:20934243-20934262 | None:intergenic | 10.0% |
| !! | AAAATGTACTTAAACTAATT+TGG | - | chr4.3:20936657-20936676 | None:intergenic | 15.0% |
| !! | AAATAAATAATGTTTGTATG+TGG | + | chr4.3:20935691-20935710 | MS.gene068018:intron | 15.0% |
| !! | AAATGTACTTAAACTAATTT+GGG | - | chr4.3:20936656-20936675 | None:intergenic | 15.0% |
| !! | AAGAAAAAAAAATTACATGA+AGG | + | chr4.3:20934304-20934323 | MS.gene068018:intron | 15.0% |
| !! | ATAGAAAAGATATTAAACAA+AGG | - | chr4.3:20937564-20937583 | None:intergenic | 15.0% |
| !! | ATCAAATAAATACAACTAAA+TGG | - | chr4.3:20938044-20938063 | None:intergenic | 15.0% |
| !! | TAAGAAGAAAAAAAGAATTA+GGG | - | chr4.3:20934716-20934735 | None:intergenic | 15.0% |
| !! | TATAAGGGTAATTTAATAAA+GGG | + | chr4.3:20934099-20934118 | MS.gene068018:intron | 15.0% |
| !! | TTAAGAAGAAAAAAAGAATT+AGG | - | chr4.3:20934717-20934736 | None:intergenic | 15.0% |
| !! | TTATAAGGGTAATTTAATAA+AGG | + | chr4.3:20934098-20934117 | MS.gene068018:intron | 15.0% |
| !!! | AATTAGTTTAAGTACATTTT+AGG | + | chr4.3:20936657-20936676 | MS.gene068018:intron | 15.0% |
| !!! | ATCTTTTCTATTAAATTAAG+TGG | + | chr4.3:20937573-20937592 | MS.gene068018:intron | 15.0% |
| !!! | ATTTATCTAGTTTATAGAAA+AGG | - | chr4.3:20936792-20936811 | None:intergenic | 15.0% |
| !!! | TCTTTTCTATTAAATTAAGT+GGG | + | chr4.3:20937574-20937593 | MS.gene068018:intron | 15.0% |
| !!! | TCTTTTTTTCTTCTTAATTT+TGG | + | chr4.3:20934720-20934739 | MS.gene068018:intron | 15.0% |
| !!! | TGAATGAATATAAGTTATTT+TGG | - | chr4.3:20936333-20936352 | None:intergenic | 15.0% |
| !!! | TTTTCTATAAACTAGATAAA+TGG | + | chr4.3:20936791-20936810 | MS.gene068018:intron | 15.0% |
| !! | AAAAAAAGAATTAGGGTAAA+AGG | - | chr4.3:20934709-20934728 | None:intergenic | 20.0% |
| !! | AAAAAAGAATTAGGGTAAAA+GGG | - | chr4.3:20934708-20934727 | None:intergenic | 20.0% |
| !! | AAAACTAAATTTGAGTAACA+AGG | - | chr4.3:20935802-20935821 | None:intergenic | 20.0% |
| !! | AAATTTCTATCAAAAATACC+AGG | + | chr4.3:20934429-20934448 | MS.gene068018:intron | 20.0% |
| !! | ACTTCAACATGAAATTTATA+AGG | + | chr4.3:20934083-20934102 | MS.gene068018:intron | 20.0% |
| !! | AGTAATATAATCTCTCTTTA+AGG | - | chr4.3:20936405-20936424 | None:intergenic | 20.0% |
| !! | CTTCAACATGAAATTTATAA+GGG | + | chr4.3:20934084-20934103 | MS.gene068018:intron | 20.0% |
| !! | GATAAACAAACTAATATAAG+AGG | - | chr4.3:20938427-20938446 | None:intergenic | 20.0% |
| !! | GATATATGTATTCAATTGAA+TGG | + | chr4.3:20936533-20936552 | MS.gene068018:intron | 20.0% |
| !! | GTAATTTAATAAAGGGTTAA+TGG | + | chr4.3:20934106-20934125 | MS.gene068018:intron | 20.0% |
| !! | TAAAGAGAGATTATATTACT+TGG | + | chr4.3:20936405-20936424 | MS.gene068018:intron | 20.0% |
| !! | TCAAAAGAAATTAACAAAGT+TGG | + | chr4.3:20936216-20936235 | MS.gene068018:CDS | 20.0% |
| !!! | AATTGGTTTGTATATTCTTA+CGG | + | chr4.3:20938772-20938791 | MS.gene068018:intron | 20.0% |
| !!! | ACTTAATAGTTTAAAGTGAA+GGG | + | chr4.3:20938465-20938484 | MS.gene068018:intron | 20.0% |
| !!! | ATAACTTCAGTCTAAAATTA+AGG | - | chr4.3:20935062-20935081 | None:intergenic | 20.0% |
| !!! | ATTTGTCAGATATAACTTTT+TGG | + | chr4.3:20936445-20936464 | MS.gene068018:intron | 20.0% |
| !!! | ATTTTAATCATGTAATGTGA+TGG | + | chr4.3:20935151-20935170 | MS.gene068018:intron | 20.0% |
| !!! | CAAATTTAGTTTTCAGTTTT+TGG | + | chr4.3:20935809-20935828 | MS.gene068018:intron | 20.0% |
| !!! | CTTTTACTAGTTAGATTATA+AGG | + | chr4.3:20934994-20935013 | MS.gene068018:intron | 20.0% |
| !!! | GTGATCTAGAAATTATTTTT+AGG | - | chr4.3:20937447-20937466 | None:intergenic | 20.0% |
| !!! | TACTTAATAGTTTAAAGTGA+AGG | + | chr4.3:20938464-20938483 | MS.gene068018:intron | 20.0% |
| !!! | TACTTTTTTTCTGAAAACAT+TGG | - | chr4.3:20936488-20936507 | None:intergenic | 20.0% |
| !!! | TATTTTATTTACAACTTTGC+AGG | + | chr4.3:20936152-20936171 | MS.gene068018:intron | 20.0% |
| !!! | TATTTTCAGATTAACAAACA+AGG | - | chr4.3:20935448-20935467 | None:intergenic | 20.0% |
| !!! | TATTTTTAGGATTAAGTGAT+TGG | - | chr4.3:20937434-20937453 | None:intergenic | 20.0% |
| !!! | TGTTTGTTAATCTGAAAATA+TGG | + | chr4.3:20935448-20935467 | MS.gene068018:intron | 20.0% |
| !!! | TTTGTCAGATATAACTTTTT+GGG | + | chr4.3:20936446-20936465 | MS.gene068018:intron | 20.0% |
| !!! | TTTTTTATAGAAGGTAAACA+TGG | - | chr4.3:20934155-20934174 | None:intergenic | 20.0% |
| ! | AAAAAGAATTAGGGTAAAAG+GGG | - | chr4.3:20934707-20934726 | None:intergenic | 25.0% |
| ! | AAATGAGCTTATAGACAAAA+AGG | - | chr4.3:20938744-20938763 | None:intergenic | 25.0% |
| ! | AAATTGAAATTACCTGATGT+CGG | - | chr4.3:20936270-20936289 | None:intergenic | 25.0% |
| ! | ATGTTTGTCTAGATTTCAAT+TGG | + | chr4.3:20935937-20935956 | MS.gene068018:intron | 25.0% |
| ! | CTCAATGTAATCAATTAGAT+TGG | + | chr4.3:20936725-20936744 | MS.gene068018:intron | 25.0% |
| ! | TAATGCATATAACCTAGAAA+AGG | - | chr4.3:20938133-20938152 | None:intergenic | 25.0% |
| ! | TAATGGTGCTTTAGTAATAT+AGG | + | chr4.3:20934123-20934142 | MS.gene068018:intron | 25.0% |
| ! | TAGACTGAAGTTATAGAATT+TGG | + | chr4.3:20935068-20935087 | MS.gene068018:intron | 25.0% |
| ! | TCAATTGAATACATATATCC+TGG | - | chr4.3:20936532-20936551 | None:intergenic | 25.0% |
| ! | TTATAAGGTAGTAGTAGTTT+AGG | + | chr4.3:20935009-20935028 | MS.gene068018:intron | 25.0% |
| ! | TTCATGTTTGAATTTACCAA+AGG | - | chr4.3:20934398-20934417 | None:intergenic | 25.0% |
| ! | TTCTCTTGAATAACAATAGT+TGG | + | chr4.3:20936889-20936908 | MS.gene068018:intron | 25.0% |
| ! | TTGAATTTACCAAAGGTTAA+CGG | - | chr4.3:20934391-20934410 | None:intergenic | 25.0% |
| ! | TTGATAAGGTTCAAAATTGA+AGG | + | chr4.3:20934791-20934810 | MS.gene068018:intron | 25.0% |
| ! | TTTGACAATAGAAATGAAGT+TGG | + | chr4.3:20935094-20935113 | MS.gene068018:intron | 25.0% |
| !! | AAACATAATTTGCCAATGTT+TGG | - | chr4.3:20937210-20937229 | None:intergenic | 25.0% |
| !! | AATTTTCCCTTATTCTTACT+TGG | + | chr4.3:20934660-20934679 | MS.gene068018:intron | 25.0% |
| !! | ACTCAATAGTTTAAAGTGAA+GGG | + | chr4.3:20938574-20938593 | MS.gene068018:intron | 25.0% |
| !! | ATTTTCCCTTATTCTTACTT+GGG | + | chr4.3:20934661-20934680 | MS.gene068018:intron | 25.0% |
| !! | TACTCAATAGTTTAAAGTGA+AGG | + | chr4.3:20938573-20938592 | MS.gene068018:intron | 25.0% |
| !! | TTCACTATCTTTTGTATAGT+AGG | + | chr4.3:20937234-20937253 | MS.gene068018:intron | 25.0% |
| !! | TTTTTGCATAACCTATTAGA+GGG | + | chr4.3:20934274-20934293 | MS.gene068018:intron | 25.0% |
| !!! | AAAAGGCATTTCATATTTCA+TGG | - | chr4.3:20936775-20936794 | None:intergenic | 25.0% |
| !!! | AAACTAATATAAGAGGCATT+TGG | - | chr4.3:20938420-20938439 | None:intergenic | 25.0% |
| !!! | AAGTAGTGATGATTTTTCAA+GGG | - | chr4.3:20935367-20935386 | None:intergenic | 25.0% |
| !!! | AGCTCATTTCTTTTGAAAAT+TGG | + | chr4.3:20938755-20938774 | MS.gene068018:intron | 25.0% |
| !!! | TCAGAAAAAAAGTATCTGTA+TGG | + | chr4.3:20936494-20936513 | MS.gene068018:intron | 25.0% |
| !!! | TCTTCATGGTTATTTCTAAA+GGG | - | chr4.3:20934950-20934969 | None:intergenic | 25.0% |
| !!! | TTACTTTGGTTTGTCATTTA+AGG | - | chr4.3:20938939-20938958 | None:intergenic | 25.0% |
| !!! | TTATACGGAAAGTACTATAA+AGG | - | chr4.3:20936559-20936578 | None:intergenic | 25.0% |
| !!! | TTGGTTTTTGTATGCTTATT+AGG | - | chr4.3:20934224-20934243 | None:intergenic | 25.0% |
| AAAAACTGTTTACCTTCTAC+TGG | + | chr4.3:20937536-20937555 | MS.gene068018:intron | 30.0% | |
| AAAATATACAGTGCTTGTGT+AGG | + | chr4.3:20938340-20938359 | MS.gene068018:intron | 30.0% | |
| AAATGGAACAGAATGATGAA+GGG | - | chr4.3:20935298-20935317 | None:intergenic | 30.0% | |
| AAGGGAGTTGAGTATTTATT+GGG | - | chr4.3:20937081-20937100 | None:intergenic | 30.0% | |
| AATTGAAATTACCTGATGTC+GGG | - | chr4.3:20936269-20936288 | None:intergenic | 30.0% | |
| AGGGTCGTAATATAGTTATA+CGG | - | chr4.3:20936574-20936593 | None:intergenic | 30.0% | |
| ATAATGTTTGTATGTGGCAA+TGG | + | chr4.3:20935697-20935716 | MS.gene068018:intron | 30.0% | |
| ATGGAAAATTCCAATGACAA+TGG | - | chr4.3:20938073-20938092 | None:intergenic | 30.0% | |
| ATTATTGATCCAAAAGGAGA+TGG | - | chr4.3:20937717-20937736 | None:intergenic | 30.0% | |
| CAATACTAAAGATGATTGCT+TGG | + | chr4.3:20934767-20934786 | MS.gene068018:intron | 30.0% | |
| CATACAAACTTAACTCTTCA+TGG | - | chr4.3:20934964-20934983 | None:intergenic | 30.0% | |
| CATGAAGAGTTAAGTTTGTA+TGG | + | chr4.3:20934962-20934981 | MS.gene068018:intron | 30.0% | |
| CTAGGTTATATGCATTAGTT+TGG | + | chr4.3:20938136-20938155 | MS.gene068018:intron | 30.0% | |
| CTCTTCCAATTGATTGAATT+TGG | - | chr4.3:20934621-20934640 | None:intergenic | 30.0% | |
| CTGGAAATAACCTATATTAC+AGG | + | chr4.3:20934358-20934377 | MS.gene068018:intron | 30.0% | |
| CTTTAGTAACTACAGATCAT+GGG | - | chr4.3:20937264-20937283 | None:intergenic | 30.0% | |
| GAGTTTCTCTTCATCAAATA+TGG | + | chr4.3:20936174-20936193 | MS.gene068018:CDS | 30.0% | |
| GATACACTTCTGTATAAAAG+CGG | + | chr4.3:20933687-20933706 | MS.gene068018:intron | 30.0% | |
| GATTGAAACACCTGAATTTA+AGG | - | chr4.3:20937489-20937508 | None:intergenic | 30.0% | |
| GCTTCAAACTACAATATGAA+TGG | + | chr4.3:20933454-20933473 | MS.gene068018:intron | 30.0% | |
| GGACAAATCGTATCTTATAT+CGG | + | chr4.3:20938859-20938878 | MS.gene068018:CDS | 30.0% | |
| GTGATAATATAACACAGGTT+TGG | + | chr4.3:20933599-20933618 | MS.gene068018:intron | 30.0% | |
| GTTTCTCATATCAAGGATAA+TGG | - | chr4.3:20938177-20938196 | None:intergenic | 30.0% | |
| TATACGTATCAGTGCTAAAA+TGG | - | chr4.3:20935654-20935673 | None:intergenic | 30.0% | |
| TGGAAAATTCCAATGACAAT+GGG | - | chr4.3:20938072-20938091 | None:intergenic | 30.0% | |
| TGGTAGGTCGAAATTTATAA+GGG | + | chr4.3:20934465-20934484 | MS.gene068018:intron | 30.0% | |
| TGTTGAAGTGACTAAGAATA+AGG | - | chr4.3:20934072-20934091 | None:intergenic | 30.0% | |
| TTAATCATGTAATGTGATGG+TGG | + | chr4.3:20935154-20935173 | MS.gene068018:intron | 30.0% | |
| TTAGTTTACTACCAATGAAG+TGG | - | chr4.3:20937129-20937148 | None:intergenic | 30.0% | |
| TTGGTAGGTCGAAATTTATA+AGG | + | chr4.3:20934464-20934483 | MS.gene068018:intron | 30.0% | |
| TTTCGGTGATAATATAACAC+AGG | + | chr4.3:20933594-20933613 | MS.gene068018:intron | 30.0% | |
| ! | AATAGGCTGTAGTATTTTTC+TGG | + | chr4.3:20936007-20936026 | MS.gene068018:intron | 30.0% |
| ! | AATTGATTGAATTTGGTAGC+CGG | - | chr4.3:20934614-20934633 | None:intergenic | 30.0% |
| ! | AGAATGATAAGTTGAGGAAT+GGG | + | chr4.3:20937634-20937653 | MS.gene068018:CDS | 30.0% |
| ! | AGACAAAAGACTCTTTTAAC+TGG | - | chr4.3:20938376-20938395 | None:intergenic | 30.0% |
| ! | ATATGCATTAGTTTGGAATC+TGG | + | chr4.3:20938143-20938162 | MS.gene068018:intron | 30.0% |
| ! | ATATTTTACAGGGATAAACC+TGG | + | chr4.3:20934339-20934358 | MS.gene068018:intron | 30.0% |
| ! | ATTAGCCATATTTCTGTATG+TGG | + | chr4.3:20938018-20938037 | MS.gene068018:intron | 30.0% |
| ! | ATTTGAAGCATAATACTGAC+CGG | - | chr4.3:20938502-20938521 | None:intergenic | 30.0% |
| ! | CAAGTAGTGATGATTTTTCA+AGG | - | chr4.3:20935368-20935387 | None:intergenic | 30.0% |
| ! | CCTTTTGGATCAATAATGAA+GGG | + | chr4.3:20937720-20937739 | MS.gene068018:CDS | 30.0% |
| ! | CTCTTATAACTTGATGACAA+AGG | + | chr4.3:20936627-20936646 | MS.gene068018:intron | 30.0% |
| ! | CTGAAAATATGGTGTTGAAT+GGG | + | chr4.3:20935459-20935478 | MS.gene068018:intron | 30.0% |
| ! | CTGTAATATAGGTTATTTCC+AGG | - | chr4.3:20934360-20934379 | None:intergenic | 30.0% |
| ! | GATTATTTTCCACCTTTTCT+AGG | + | chr4.3:20938118-20938137 | MS.gene068018:intron | 30.0% |
| ! | GTTTTTGCATAACCTATTAG+AGG | + | chr4.3:20934273-20934292 | MS.gene068018:intron | 30.0% |
| ! | GTTTTTGTATGCTTATTAGG+AGG | - | chr4.3:20934221-20934240 | None:intergenic | 30.0% |
| ! | TCCTTTTGGATCAATAATGA+AGG | + | chr4.3:20937719-20937738 | MS.gene068018:CDS | 30.0% |
| ! | TCTGAAAATATGGTGTTGAA+TGG | + | chr4.3:20935458-20935477 | MS.gene068018:intron | 30.0% |
| ! | TGAAAATATGGTGTTGAATG+GGG | + | chr4.3:20935460-20935479 | MS.gene068018:intron | 30.0% |
| !! | AAAGTGCTTGTTATTTGGTT+TGG | + | chr4.3:20935607-20935626 | MS.gene068018:intron | 30.0% |
| !! | AAGTGAAAGTGCTTGTTATT+TGG | + | chr4.3:20935602-20935621 | MS.gene068018:intron | 30.0% |
| !! | CTCTTCATGGTTATTTCTAA+AGG | - | chr4.3:20934951-20934970 | None:intergenic | 30.0% |
| !! | GTTGTCTTTTTCATCTACTT+CGG | + | chr4.3:20937984-20938003 | MS.gene068018:intron | 30.0% |
| !! | TTTGCTTTAGGAATGGATTT+GGG | + | chr4.3:20935749-20935768 | MS.gene068018:intron | 30.0% |
| !!! | AGTTTTCAGTTTTTGGTTGT+GGG | + | chr4.3:20935816-20935835 | MS.gene068018:intron | 30.0% |
| !!! | ATGCTTATTAGGAGGTATTT+TGG | - | chr4.3:20934213-20934232 | None:intergenic | 30.0% |
| !!! | GTTTTTTCCATGAGACAAAT+AGG | + | chr4.3:20935990-20936009 | MS.gene068018:intron | 30.0% |
| !!! | TAGTTTTCAGTTTTTGGTTG+TGG | + | chr4.3:20935815-20935834 | MS.gene068018:intron | 30.0% |
| AAATTCTTTGACACAGGCAA+GGG | - | chr4.3:20937099-20937118 | None:intergenic | 35.0% | |
| AATGATCCTGTGTTTGCTTT+AGG | + | chr4.3:20935737-20935756 | MS.gene068018:intron | 35.0% | |
| AATGGCCACATACAGAAATA+TGG | - | chr4.3:20938026-20938045 | None:intergenic | 35.0% | |
| AATTAGGGTAAAAGGGGTTT+GGG | - | chr4.3:20934701-20934720 | None:intergenic | 35.0% | |
| ACACAGCAAATACCAAACAT+TGG | + | chr4.3:20937195-20937214 | MS.gene068018:intron | 35.0% | |
| AGAATGATGAAGGGTAATGA+AGG | - | chr4.3:20935289-20935308 | None:intergenic | 35.0% | |
| AGCAGAAGCAATTATGTAGA+AGG | - | chr4.3:20937019-20937038 | None:intergenic | 35.0% | |
| ATGGTGGTTGGATGATTATT+AGG | + | chr4.3:20935170-20935189 | MS.gene068018:intron | 35.0% | |
| ATTTAAGCCAACCACTTCAT+TGG | + | chr4.3:20937115-20937134 | MS.gene068018:intron | 35.0% | |
| CAAGGGAGTTGAGTATTTAT+TGG | - | chr4.3:20937082-20937101 | None:intergenic | 35.0% | |
| CAATAATGAAGGGAGTTTCA+GGG | + | chr4.3:20937730-20937749 | MS.gene068018:CDS | 35.0% | |
| CAATTGTAGATAGTAGCACA+TGG | - | chr4.3:20937296-20937315 | None:intergenic | 35.0% | |
| CATCATAAGCAGAAACAAGT+CGG | - | chr4.3:20935920-20935939 | None:intergenic | 35.0% | |
| CCAATCAAATATACACACAG+AGG | - | chr4.3:20936091-20936110 | None:intergenic | 35.0% | |
| CCCTTCATTATTGATCCAAA+AGG | - | chr4.3:20937723-20937742 | None:intergenic | 35.0% | |
| CCTCTGTGTGTATATTTGAT+TGG | + | chr4.3:20936088-20936107 | MS.gene068018:intron | 35.0% | |
| GAAATGGAACAGAATGATGA+AGG | - | chr4.3:20935299-20935318 | None:intergenic | 35.0% | |
| GATGATTGCTTGGATTGATA+AGG | + | chr4.3:20934777-20934796 | MS.gene068018:intron | 35.0% | |
| GCTCATACTATATTGGAAAC+AGG | + | chr4.3:20937873-20937892 | MS.gene068018:CDS | 35.0% | |
| GCTTTAGTAACTACAGATCA+TGG | - | chr4.3:20937265-20937284 | None:intergenic | 35.0% | |
| GGCTACCAAATTCAATCAAT+TGG | + | chr4.3:20934613-20934632 | MS.gene068018:CDS | 35.0% | |
| GTATTGCTAAGATGGAAAGA+TGG | - | chr4.3:20938092-20938111 | None:intergenic | 35.0% | |
| GTCTCTATTTGCTTCTGTTT+CGG | + | chr4.3:20936048-20936067 | MS.gene068018:CDS | 35.0% | |
| GTGTATATTTGATTGGTGTG+AGG | + | chr4.3:20936095-20936114 | MS.gene068018:intron | 35.0% | |
| GTTATTGTTGTGAAAGTTCG+AGG | + | chr4.3:20938696-20938715 | MS.gene068018:intron | 35.0% | |
| TAAACAAAGGATCCAGTAGA+AGG | - | chr4.3:20937551-20937570 | None:intergenic | 35.0% | |
| TAAATTCTTTGACACAGGCA+AGG | - | chr4.3:20937100-20937119 | None:intergenic | 35.0% | |
| TAAATTTCGACCTACCAACT+CGG | - | chr4.3:20934462-20934481 | None:intergenic | 35.0% | |
| TAAGGTGACATTCTTGTTCT+GGG | - | chr4.3:20936387-20936406 | None:intergenic | 35.0% | |
| TCAATAATGAAGGGAGTTTC+AGG | + | chr4.3:20937729-20937748 | MS.gene068018:CDS | 35.0% | |
| TCATGACACCAAATACAAAC+CGG | - | chr4.3:20935778-20935797 | None:intergenic | 35.0% | |
| TCCTGTACTTCCTTAAATTC+AGG | + | chr4.3:20937476-20937495 | MS.gene068018:intron | 35.0% | |
| TCTCACATGTATTGCTAAGA+TGG | - | chr4.3:20938100-20938119 | None:intergenic | 35.0% | |
| TCTTCAGAATACCCTCTAAT+AGG | - | chr4.3:20934288-20934307 | None:intergenic | 35.0% | |
| TGATAAAAGCCCATTGTCAT+TGG | + | chr4.3:20938060-20938079 | MS.gene068018:intron | 35.0% | |
| TGCATATAACCTAGAAAAGG+TGG | - | chr4.3:20938130-20938149 | None:intergenic | 35.0% | |
| TGGCTTAAATTCTTTGACAC+AGG | - | chr4.3:20937105-20937124 | None:intergenic | 35.0% | |
| TTAAAACCAACAACACCTCT+AGG | - | chr4.3:20935966-20935985 | None:intergenic | 35.0% | |
| TTAAGGTGACATTCTTGTTC+TGG | - | chr4.3:20936388-20936407 | None:intergenic | 35.0% | |
| TTGTGGAACACTAATGAGTA+AGG | - | chr4.3:20936963-20936982 | None:intergenic | 35.0% | |
| TTTACTACCAATGAAGTGGT+TGG | - | chr4.3:20937125-20937144 | None:intergenic | 35.0% | |
| ! | AACTTTGATAACTCACAGAG+AGG | - | chr4.3:20933434-20933453 | None:intergenic | 35.0% |
| ! | ACCTGAATTTAAGGAAGTAC+AGG | - | chr4.3:20937480-20937499 | None:intergenic | 35.0% |
| ! | CGGTGTTTTACCTGTAATAT+AGG | - | chr4.3:20934371-20934390 | None:intergenic | 35.0% |
| ! | GAGTTTAAAGCTATGAATGG+TGG | + | chr4.3:20933568-20933587 | MS.gene068018:intron | 35.0% |
| ! | GCACATTGTTTCTCATATCA+AGG | - | chr4.3:20938184-20938203 | None:intergenic | 35.0% |
| ! | GCTGAGTTTAAAGCTATGAA+TGG | + | chr4.3:20933565-20933584 | MS.gene068018:intron | 35.0% |
| ! | GGGTATGCAATTTTCTGTTT+TGG | + | chr4.3:20937594-20937613 | MS.gene068018:intron | 35.0% |
| ! | TATATGTCTGTGTGTTTTCG+TGG | + | chr4.3:20935880-20935899 | MS.gene068018:intron | 35.0% |
| ! | TTTAGTCTGGAGTTGTGTTT+GGG | - | chr4.3:20937176-20937195 | None:intergenic | 35.0% |
| ! | TTTTATTCTACTCTGCTCTC+AGG | + | chr4.3:20937898-20937917 | MS.gene068018:intron | 35.0% |
| ! | TTTTTCTGCAGACATTGCTT+AGG | + | chr4.3:20935851-20935870 | MS.gene068018:intron | 35.0% |
| !! | AATACACTGACTTGTTCATG+TGG | + | chr4.3:20933512-20933531 | MS.gene068018:intron | 35.0% |
| !! | ATTGGAAGAGTATTGAAGCA+TGG | + | chr4.3:20934631-20934650 | MS.gene068018:CDS | 35.0% |
| !! | GTTTGCTTTAGGAATGGATT+TGG | + | chr4.3:20935748-20935767 | MS.gene068018:intron | 35.0% |
| !! | TACTCTTCATTGATTCAACG+TGG | + | chr4.3:20938287-20938306 | MS.gene068018:intron | 35.0% |
| !!! | GTATTTTTCTGGTTTGATGC+AGG | + | chr4.3:20936018-20936037 | MS.gene068018:intron | 35.0% |
| AAAAGAGTCATGGTTACCAC+AGG | - | chr4.3:20937793-20937812 | None:intergenic | 40.0% | |
| AAAGACAAGAAGCTTGAAGG+AGG | + | chr4.3:20934821-20934840 | MS.gene068018:CDS | 40.0% | |
| ACAAGTGATTTAAGCACTCC+TGG | - | chr4.3:20938914-20938933 | None:intergenic | 40.0% | |
| ACTACAGCCTATTTGTCTCA+TGG | - | chr4.3:20936000-20936019 | None:intergenic | 40.0% | |
| ACTTACTGCGCTAAGGAAAA+AGG | + | chr4.3:20937668-20937687 | MS.gene068018:CDS | 40.0% | |
| AGAAGCTCAAGAAAGCGAAA+TGG | - | chr4.3:20935315-20935334 | None:intergenic | 40.0% | |
| AGGGAGTCATTTCCTGAAAA+AGG | - | chr4.3:20935348-20935367 | None:intergenic | 40.0% | |
| AGTAACTACAGATCATGGGA+TGG | - | chr4.3:20937260-20937279 | None:intergenic | 40.0% | |
| ATAAACCAAGGCCTAAGAGA+GGG | - | chr4.3:20933815-20933834 | None:intergenic | 40.0% | |
| ATAGTATGAGCAGCATGGAA+TGG | - | chr4.3:20937864-20937883 | None:intergenic | 40.0% | |
| ATCCATCAACCAGAGAACTT+GGG | + | chr4.3:20936857-20936876 | MS.gene068018:intron | 40.0% | |
| ATGCAGAGCTTAGTCACAAA+AGG | - | chr4.3:20935548-20935567 | None:intergenic | 40.0% | |
| ATTGGGTTCTATGAGACCTA+GGG | - | chr4.3:20937064-20937083 | None:intergenic | 40.0% | |
| ATTGTAGAGCTTTACCCCAA+AGG | - | chr4.3:20933869-20933888 | None:intergenic | 40.0% | |
| CAAGAGAAGCTAATACAGGT+GGG | + | chr4.3:20934872-20934891 | MS.gene068018:intron | 40.0% | |
| CAGCATGATGAAGAGTGATA+GGG | - | chr4.3:20936593-20936612 | None:intergenic | 40.0% | |
| CAGTCATGTCTTAGACTGTT+TGG | + | chr4.3:20938209-20938228 | MS.gene068018:intron | 40.0% | |
| CATGACACCAAATACAAACC+GGG | - | chr4.3:20935777-20935796 | None:intergenic | 40.0% | |
| CCAATATAGTATGAGCAGCA+TGG | - | chr4.3:20937869-20937888 | None:intergenic | 40.0% | |
| CCATGCTGCTCATACTATAT+TGG | + | chr4.3:20937866-20937885 | MS.gene068018:CDS | 40.0% | |
| CGAAGGTCAAAGATAAACCA+AGG | - | chr4.3:20933827-20933846 | None:intergenic | 40.0% | |
| CTATTTCCAAACCCTCTCTT+AGG | + | chr4.3:20933801-20933820 | MS.gene068018:intron | 40.0% | |
| CTGAAAGACAAGAAGCTTGA+AGG | + | chr4.3:20934818-20934837 | MS.gene068018:CDS | 40.0% | |
| CTTTGACCTTCGAGAATTTC+TGG | + | chr4.3:20933835-20933854 | MS.gene068018:intron | 40.0% | |
| GAATTAGGGTAAAAGGGGTT+TGG | - | chr4.3:20934702-20934721 | None:intergenic | 40.0% | |
| GCATCAAGAGAAGCTAATAC+AGG | + | chr4.3:20934868-20934887 | MS.gene068018:CDS | 40.0% | |
| GCCAACCCAAGTAAGAATAA+GGG | - | chr4.3:20934669-20934688 | None:intergenic | 40.0% | |
| GGGAGTCATTTCCTGAAAAA+GGG | - | chr4.3:20935347-20935366 | None:intergenic | 40.0% | |
| GGTAAAACACCGTTAACCTT+TGG | + | chr4.3:20934379-20934398 | MS.gene068018:intron | 40.0% | |
| GGTTGAATTGAGCTTGCATT+TGG | + | chr4.3:20934741-20934760 | MS.gene068018:intron | 40.0% | |
| GTCAATGGTAGATGTCTCTT+AGG | + | chr4.3:20936916-20936935 | MS.gene068018:intron | 40.0% | |
| GTGAAAGGTCACATTCTTCT+AGG | - | chr4.3:20935241-20935260 | None:intergenic | 40.0% | |
| TACCAACTCGGTAATAAACC+TGG | - | chr4.3:20934450-20934469 | None:intergenic | 40.0% | |
| TACCAGGTTTATTACCGAGT+TGG | + | chr4.3:20934445-20934464 | MS.gene068018:intron | 40.0% | |
| TATCTGTATGGCCTTCAACT+TGG | + | chr4.3:20936506-20936525 | MS.gene068018:intron | 40.0% | |
| TATTGGGTTCTATGAGACCT+AGG | - | chr4.3:20937065-20937084 | None:intergenic | 40.0% | |
| TCAAGAGAAGCTAATACAGG+TGG | + | chr4.3:20934871-20934890 | MS.gene068018:intron | 40.0% | |
| TCCATTCCTAAAGCAAACAC+AGG | - | chr4.3:20935746-20935765 | None:intergenic | 40.0% | |
| TCCCTTATTCTTACTTGGGT+TGG | + | chr4.3:20934665-20934684 | MS.gene068018:intron | 40.0% | |
| TCGTATCTTATATCGGAGAC+AGG | + | chr4.3:20938866-20938885 | MS.gene068018:CDS | 40.0% | |
| TTAAAGTGAAGGGTTGAGCA+TGG | + | chr4.3:20938475-20938494 | MS.gene068018:intron | 40.0% | |
| TTATCAGCAGTAGCATATCC+TGG | - | chr4.3:20933369-20933388 | None:intergenic | 40.0% | |
| TTGTAGAGCTTTACCCCAAA+GGG | - | chr4.3:20933868-20933887 | None:intergenic | 40.0% | |
| TTGTAGATAGTAGCACATGG+TGG | - | chr4.3:20937293-20937312 | None:intergenic | 40.0% | |
| ! | ACCTTCGAGAATTTCTGGAA+GGG | + | chr4.3:20933840-20933859 | MS.gene068018:intron | 40.0% |
| ! | ACTAGTGTTCCATCTCCTTT+TGG | + | chr4.3:20937705-20937724 | MS.gene068018:CDS | 40.0% |
| ! | ATATATCCTGGCCAAGTTGA+AGG | - | chr4.3:20936520-20936539 | None:intergenic | 40.0% |
| ! | CTCTTGAATCTCCCTTTTTC+AGG | + | chr4.3:20935333-20935352 | MS.gene068018:intron | 40.0% |
| ! | GATTTCAATTGGTAGCCTAG+AGG | + | chr4.3:20935948-20935967 | MS.gene068018:intron | 40.0% |
| ! | GTTTAGTCTGGAGTTGTGTT+TGG | - | chr4.3:20937177-20937196 | None:intergenic | 40.0% |
| ! | TGATAACGAAGAGTATGAGG+AGG | + | chr4.3:20933383-20933402 | MS.gene068018:CDS | 40.0% |
| ! | TGCTGATAACGAAGAGTATG+AGG | + | chr4.3:20933380-20933399 | MS.gene068018:CDS | 40.0% |
| !! | ACAATAGTTGGTGCTGTCAA+TGG | + | chr4.3:20936901-20936920 | MS.gene068018:intron | 40.0% |
| !! | AGGTTTATTACCGAGTTGGT+AGG | + | chr4.3:20934449-20934468 | MS.gene068018:intron | 40.0% |
| !! | GAAACTACAGAGCATTGTGA+AGG | + | chr4.3:20938838-20938857 | MS.gene068018:CDS | 40.0% |
| !! | GCTATGAATGGTGGATGTTT+CGG | + | chr4.3:20933577-20933596 | MS.gene068018:intron | 40.0% |
| !! | GGTATTTGCTGTGTTTAGTC+TGG | - | chr4.3:20937189-20937208 | None:intergenic | 40.0% |
| !! | TCATGTAATGTGATGGTGGT+TGG | + | chr4.3:20935158-20935177 | MS.gene068018:intron | 40.0% |
| !! | TCATTGATTCAACGTGGTTG+TGG | + | chr4.3:20938293-20938312 | MS.gene068018:intron | 40.0% |
| !! | TCCTGTGTTTGCTTTAGGAA+TGG | + | chr4.3:20935742-20935761 | MS.gene068018:intron | 40.0% |
| !!! | AGGTGTTGTTGGTTTTAAGC+TGG | + | chr4.3:20935968-20935987 | MS.gene068018:intron | 40.0% |
| AAAGATAGCCCTGACGTGTT+GGG | - | chr4.3:20936994-20937013 | None:intergenic | 45.0% | |
| AAAGGGGTTTGGGTCACATA+CGG | - | chr4.3:20934691-20934710 | None:intergenic | 45.0% | |
| AAAGTAGAAGCTGCAGGCTT+TGG | + | chr4.3:20934845-20934864 | MS.gene068018:CDS | 45.0% | |
| AAGTAGAAGCTGCAGGCTTT+GGG | + | chr4.3:20934846-20934865 | MS.gene068018:CDS | 45.0% | |
| ACGTCTGCTCAAAAGAGTCA+TGG | - | chr4.3:20937803-20937822 | None:intergenic | 45.0% | |
| AGCGAATGACATGAGTCAGT+TGG | - | chr4.3:20937395-20937414 | None:intergenic | 45.0% | |
| ATATCGTTTCCCAACACGTC+AGG | + | chr4.3:20936982-20937001 | MS.gene068018:intron | 45.0% | |
| CAATGCACAATGTCCCACAT+CGG | + | chr4.3:20933644-20933663 | MS.gene068018:intron | 45.0% | |
| CACTCCTGGACTTATCAAGT+CGG | - | chr4.3:20938900-20938919 | None:intergenic | 45.0% | |
| CATGTGGTGCTCGTATGAAA+TGG | + | chr4.3:20933528-20933547 | MS.gene068018:intron | 45.0% | |
| CCAGCATGATGAAGAGTGAT+AGG | - | chr4.3:20936594-20936613 | None:intergenic | 45.0% | |
| CCTATCACTCTTCATCATGC+TGG | + | chr4.3:20936591-20936610 | MS.gene068018:intron | 45.0% | |
| CGTGTTGGGAAACGATATTG+TGG | - | chr4.3:20936980-20936999 | None:intergenic | 45.0% | |
| CTCAAGACCTTTGGTACAAG+AGG | + | chr4.3:20937758-20937777 | MS.gene068018:CDS | 45.0% | |
| GAAGGGTAATGAAGGTTTCG+TGG | - | chr4.3:20935281-20935300 | None:intergenic | 45.0% | |
| GATAAACCAAGGCCTAAGAG+AGG | - | chr4.3:20933816-20933835 | None:intergenic | 45.0% | |
| GATCCATCAACCAGAGAACT+TGG | + | chr4.3:20936856-20936875 | MS.gene068018:intron | 45.0% | |
| GGCCAACCCAAGTAAGAATA+AGG | - | chr4.3:20934670-20934689 | None:intergenic | 45.0% | |
| GGTAATGAAGGTTTCGTGGT+GGG | - | chr4.3:20935277-20935296 | None:intergenic | 45.0% | |
| GTACACACCTCTTGTACCAA+AGG | - | chr4.3:20937768-20937787 | None:intergenic | 45.0% | |
| GTAGCATATCCTGGTATTGC+TGG | - | chr4.3:20933360-20933379 | None:intergenic | 45.0% | |
| GTGATCCAGTGGTGAAATGA+CGG | - | chr4.3:20934592-20934611 | None:intergenic | 45.0% | |
| TAAAAGCGGAGCTGATTGAC+AGG | + | chr4.3:20933701-20933720 | MS.gene068018:intron | 45.0% | |
| TATCGTTTCCCAACACGTCA+GGG | + | chr4.3:20936983-20937002 | MS.gene068018:intron | 45.0% | |
| TCAAGCAGAGCTAGACTTTG+AGG | + | chr4.3:20938811-20938830 | MS.gene068018:CDS | 45.0% | |
| TCATTTCACCACTGGATCAC+CGG | + | chr4.3:20934592-20934611 | MS.gene068018:CDS | 45.0% | |
| TTGTACCAAAGGTCTTGAGC+CGG | - | chr4.3:20937757-20937776 | None:intergenic | 45.0% | |
| ! | AGCTAATGAGGTTCTAACCG+AGG | + | chr4.3:20933756-20933775 | MS.gene068018:CDS | 45.0% |
| ! | ATGACTCTTTTGAGCAGACG+TGG | + | chr4.3:20937802-20937821 | MS.gene068018:CDS | 45.0% |
| ! | ATGGTGTTGAATGGGGTTGT+GGG | + | chr4.3:20935467-20935486 | MS.gene068018:intron | 45.0% |
| ! | GACATGAGTCAGTTGGTACT+AGG | - | chr4.3:20937388-20937407 | None:intergenic | 45.0% |
| ! | GACCTTCGAGAATTTCTGGA+AGG | + | chr4.3:20933839-20933858 | MS.gene068018:intron | 45.0% |
| ! | TAACGAAGAGTATGAGGAGG+AGG | + | chr4.3:20933386-20933405 | MS.gene068018:CDS | 45.0% |
| ! | TAGGAATGGATTTGGGATCC+CGG | + | chr4.3:20935756-20935775 | MS.gene068018:intron | 45.0% |
| ! | TATGGTGTTGAATGGGGTTG+TGG | + | chr4.3:20935466-20935485 | MS.gene068018:intron | 45.0% |
| ! | TCTTCTTTTAGCCCGACATC+AGG | + | chr4.3:20936255-20936274 | MS.gene068018:CDS | 45.0% |
| ! | TGAGTCAGTTGGTACTAGGT+TGG | - | chr4.3:20937384-20937403 | None:intergenic | 45.0% |
| ! | TTGGGATCCCGGTTTGTATT+TGG | + | chr4.3:20935767-20935786 | MS.gene068018:intron | 45.0% |
| !! | GTTCTCTGGTTGATGGATCA+AGG | - | chr4.3:20936855-20936874 | None:intergenic | 45.0% |
| !! | GTTTCTAGCTTCACCGATGT+GGG | - | chr4.3:20933660-20933679 | None:intergenic | 45.0% |
| !! | TGTTTCTAGCTTCACCGATG+TGG | - | chr4.3:20933661-20933680 | None:intergenic | 45.0% |
| !!! | CAGTTTTTGGTTGTGGGTTG+TGG | + | chr4.3:20935822-20935841 | MS.gene068018:intron | 45.0% |
| !!! | CTGTTTTGGTGAAGTACAGC+TGG | + | chr4.3:20937608-20937627 | MS.gene068018:intron | 45.0% |
| !! | AAAATAAATAAATAAGAAAA+TGG | - | chr4.3:20935419-20935438 | None:intergenic | 5.0% |
| !!! | TTAATTTTTTTTTTTATAGA+AGG | - | chr4.3:20934164-20934183 | None:intergenic | 5.0% |
| AGAGTCATGGTTACCACAGG+TGG | - | chr4.3:20937790-20937809 | None:intergenic | 50.0% | |
| AGTCAGCATCTTTGCGCTTG+GGG | + | chr4.3:20933724-20933743 | MS.gene068018:CDS | 50.0% | |
| AGTGAAGGGTTGAGCATGGA+TGG | + | chr4.3:20938479-20938498 | MS.gene068018:intron | 50.0% | |
| ATCCAGTGGTGAAATGACGG+TGG | - | chr4.3:20934589-20934608 | None:intergenic | 50.0% | |
| ATGAAGGGAGTTTCAGGGAC+CGG | + | chr4.3:20937735-20937754 | MS.gene068018:CDS | 50.0% | |
| ATTCTCTAGTCAGCTCCCTC+TGG | + | chr4.3:20934530-20934549 | MS.gene068018:intron | 50.0% | |
| CAAAGATAGCCCTGACGTGT+TGG | - | chr4.3:20936995-20937014 | None:intergenic | 50.0% | |
| CCAGGAACGGATCTGTTTGT+GGG | + | chr4.3:20937834-20937853 | MS.gene068018:CDS | 50.0% | |
| CTGCGCTAAGGAAAAAGGCT+CGG | + | chr4.3:20937673-20937692 | MS.gene068018:CDS | 50.0% | |
| CTGCTCAACCTTCTCCCTAA+TGG | + | chr4.3:20937034-20937053 | MS.gene068018:intron | 50.0% | |
| GAGTCAGCATCTTTGCGCTT+GGG | + | chr4.3:20933723-20933742 | MS.gene068018:CDS | 50.0% | |
| GATTCAACGTGGTTGTGGTG+AGG | + | chr4.3:20938298-20938317 | MS.gene068018:intron | 50.0% | |
| GCCCTTCCAGAAATTCTCGA+AGG | - | chr4.3:20933844-20933863 | None:intergenic | 50.0% | |
| GGAGGAAAAGTAGAAGCTGC+AGG | + | chr4.3:20934839-20934858 | MS.gene068018:CDS | 50.0% | |
| GGGTAATGAAGGTTTCGTGG+TGG | - | chr4.3:20935278-20935297 | None:intergenic | 50.0% | |
| GGTTCTATGAGACCTAGGGT+GGG | - | chr4.3:20937060-20937079 | None:intergenic | 50.0% | |
| GGTTTCACGGTGAGAGTGAA+AGG | - | chr4.3:20935256-20935275 | None:intergenic | 50.0% | |
| GTCTGAGTACCAGCAATACC+AGG | + | chr4.3:20933348-20933367 | MS.gene068018:CDS | 50.0% | |
| GTGGACGATGTTTCCAGGAA+CGG | + | chr4.3:20937821-20937840 | MS.gene068018:CDS | 50.0% | |
| GTGGTGCTCGTATGAAATGG+AGG | + | chr4.3:20933531-20933550 | MS.gene068018:intron | 50.0% | |
| TCCAGGAACGGATCTGTTTG+TGG | + | chr4.3:20937833-20937852 | MS.gene068018:CDS | 50.0% | |
| TGCCCAAGTTCTCTGGTTGA+TGG | - | chr4.3:20936862-20936881 | None:intergenic | 50.0% | |
| TTCTCTAGTCAGCTCCCTCT+GGG | + | chr4.3:20934531-20934550 | MS.gene068018:intron | 50.0% | |
| ! | ATTTCTGGAAGGGCTCCCTT+TGG | + | chr4.3:20933850-20933869 | MS.gene068018:intron | 50.0% |
| ! | GCAGAGGAGATTGGTGTTTG+AGG | + | chr4.3:20933408-20933427 | MS.gene068018:CDS | 50.0% |
| ! | TTTCTGGAAGGGCTCCCTTT+GGG | + | chr4.3:20933851-20933870 | MS.gene068018:intron | 50.0% |
| !! | AGGTTTCGTGGTGGGTTTCA+CGG | - | chr4.3:20935269-20935288 | None:intergenic | 50.0% |
| !! | GAGAAGCACTTACTGCGCTA+AGG | + | chr4.3:20937661-20937680 | MS.gene068018:CDS | 50.0% |
| !! | TGGTAGCCTAGAGGTGTTGT+TGG | + | chr4.3:20935957-20935976 | MS.gene068018:intron | 50.0% |
| AACCAGCAATAGACGCGCCT+CGG | - | chr4.3:20933776-20933795 | None:intergenic | 55.0% | |
| ACACAGAGGCTGCACAGTCA+AGG | - | chr4.3:20936077-20936096 | None:intergenic | 55.0% | |
| AGACCTAGGGTGGGCCATTA+GGG | - | chr4.3:20937051-20937070 | None:intergenic | 55.0% | |
| AGAGTATGAGGAGGAGGCAG+AGG | + | chr4.3:20933392-20933411 | MS.gene068018:CDS | 55.0% | |
| CAGACGTGGACGATGTTTCC+AGG | + | chr4.3:20937816-20937835 | MS.gene068018:CDS | 55.0% | |
| CCAAACCCTCTCTTAGGCCT+TGG | + | chr4.3:20933807-20933826 | MS.gene068018:intron | 55.0% | |
| CCAAGGCCTAAGAGAGGGTT+TGG | - | chr4.3:20933810-20933829 | None:intergenic | 55.0% | |
| CCCACAAACAGATCCGTTCC+TGG | - | chr4.3:20937837-20937856 | None:intergenic | 55.0% | |
| GACCACCGTCATTTCACCAC+TGG | + | chr4.3:20934584-20934603 | MS.gene068018:CDS | 55.0% | |
| GGAGTCAGCATCTTTGCGCT+TGG | + | chr4.3:20933722-20933741 | MS.gene068018:intron | 55.0% | |
| GGGCAATGACGCAGCTAATG+AGG | + | chr4.3:20933744-20933763 | MS.gene068018:CDS | 55.0% | |
| GGGTTCTATGAGACCTAGGG+TGG | - | chr4.3:20937061-20937080 | None:intergenic | 55.0% | |
| GTATGGCCTTCAACTTGGCC+AGG | + | chr4.3:20936511-20936530 | MS.gene068018:intron | 55.0% | |
| GTGAAGGGTTGAGCATGGAC+CGG | + | chr4.3:20938480-20938499 | MS.gene068018:intron | 55.0% | |
| GTGGTGAAATGACGGTGGTC+CGG | - | chr4.3:20934584-20934603 | None:intergenic | 55.0% | |
| GTGTAGCTGCCCAAGTTCTC+TGG | - | chr4.3:20936869-20936888 | None:intergenic | 55.0% | |
| TCTTCTCACCGAACCACCAC+CGG | + | chr4.3:20934562-20934581 | MS.gene068018:CDS | 55.0% | |
| ! | CAAGAGGTGTGTACCACCTG+TGG | + | chr4.3:20937774-20937793 | MS.gene068018:CDS | 55.0% |
| ! | TTCTGGAAGGGCTCCCTTTG+GGG | + | chr4.3:20933852-20933871 | MS.gene068018:intron | 55.0% |
| ! | TTTGGTAGCCGGTGATCCAG+TGG | - | chr4.3:20934603-20934622 | None:intergenic | 55.0% |
| !! | CTCGCCGACTTGATAAGTCC+AGG | + | chr4.3:20938893-20938912 | MS.gene068018:CDS | 55.0% |
| !! | GTGGTGGTTCGGTGAGAAGA+GGG | - | chr4.3:20934562-20934581 | None:intergenic | 55.0% |
| AAATGACGGTGGTCCGGTGG+TGG | - | chr4.3:20934578-20934597 | None:intergenic | 60.0% | |
| AACCGAGGCGCGTCTATTGC+TGG | + | chr4.3:20933771-20933790 | MS.gene068018:CDS | 60.0% | |
| AGGGTGGGCCATTAGGGAGA+AGG | - | chr4.3:20937045-20937064 | None:intergenic | 60.0% | |
| GAGACCTAGGGTGGGCCATT+AGG | - | chr4.3:20937052-20937071 | None:intergenic | 60.0% | |
| GAGGAGGAGGCAGAGGAGAT+TGG | + | chr4.3:20933399-20933418 | MS.gene068018:CDS | 60.0% | |
| GTGAAATGACGGTGGTCCGG+TGG | - | chr4.3:20934581-20934600 | None:intergenic | 60.0% | |
| TCTCCCTAATGGCCCACCCT+AGG | + | chr4.3:20937045-20937064 | MS.gene068018:intron | 60.0% | |
| ! | AGGGACCGGCTCAAGACCTT+TGG | + | chr4.3:20937749-20937768 | MS.gene068018:CDS | 60.0% |
| !! | GGTGGTGGTTCGGTGAGAAG+AGG | - | chr4.3:20934563-20934582 | None:intergenic | 60.0% |
| !! | GTGGTTCGGTGAGAAGAGGG+AGG | - | chr4.3:20934559-20934578 | None:intergenic | 60.0% |
| ! | ACGGTGGTCCGGTGGTGGTT+CGG | - | chr4.3:20934573-20934592 | None:intergenic | 65.0% |
| !! | AGAAGAGGGAGGCGCCCAGA+GGG | - | chr4.3:20934548-20934567 | None:intergenic | 65.0% |
| !! | GAGAAGAGGGAGGCGCCCAG+AGG | - | chr4.3:20934549-20934568 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 20933334 | 20938958 | 20933334 | ID=MS.gene068018 |
| chr4.3 | mRNA | 20933334 | 20938958 | 20933334 | ID=MS.gene068018.t1;Parent=MS.gene068018 |
| chr4.3 | exon | 20933334 | 20933437 | 20933334 | ID=MS.gene068018.t1.exon1;Parent=MS.gene068018.t1 |
| chr4.3 | CDS | 20933334 | 20933437 | 20933334 | ID=cds.MS.gene068018.t1;Parent=MS.gene068018.t1 |
| chr4.3 | exon | 20933723 | 20933792 | 20933723 | ID=MS.gene068018.t1.exon2;Parent=MS.gene068018.t1 |
| chr4.3 | CDS | 20933723 | 20933792 | 20933723 | ID=cds.MS.gene068018.t1;Parent=MS.gene068018.t1 |
| chr4.3 | exon | 20934543 | 20934652 | 20934543 | ID=MS.gene068018.t1.exon3;Parent=MS.gene068018.t1 |
| chr4.3 | CDS | 20934543 | 20934652 | 20934543 | ID=cds.MS.gene068018.t1;Parent=MS.gene068018.t1 |
| chr4.3 | exon | 20934799 | 20934889 | 20934799 | ID=MS.gene068018.t1.exon4;Parent=MS.gene068018.t1 |
| chr4.3 | CDS | 20934799 | 20934889 | 20934799 | ID=cds.MS.gene068018.t1;Parent=MS.gene068018.t1 |
| chr4.3 | exon | 20936040 | 20936092 | 20936040 | ID=MS.gene068018.t1.exon5;Parent=MS.gene068018.t1 |
| chr4.3 | CDS | 20936040 | 20936092 | 20936040 | ID=cds.MS.gene068018.t1;Parent=MS.gene068018.t1 |
| chr4.3 | exon | 20936174 | 20936276 | 20936174 | ID=MS.gene068018.t1.exon6;Parent=MS.gene068018.t1 |
| chr4.3 | CDS | 20936174 | 20936276 | 20936174 | ID=cds.MS.gene068018.t1;Parent=MS.gene068018.t1 |
| chr4.3 | exon | 20937627 | 20937894 | 20937627 | ID=MS.gene068018.t1.exon7;Parent=MS.gene068018.t1 |
| chr4.3 | CDS | 20937627 | 20937894 | 20937627 | ID=cds.MS.gene068018.t1;Parent=MS.gene068018.t1 |
| chr4.3 | exon | 20938810 | 20938958 | 20938810 | ID=MS.gene068018.t1.exon8;Parent=MS.gene068018.t1 |
| chr4.3 | CDS | 20938810 | 20938958 | 20938810 | ID=cds.MS.gene068018.t1;Parent=MS.gene068018.t1 |
| Gene Sequence |
| Protein sequence |
