AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068134

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068134.t1 MTR_1g050740 98.976 781 7 1 1 780 1 781 0.0 1604
MS.gene068134.t1 MTR_7g089950 70.690 812 186 12 1 780 1 792 0.0 1126
MS.gene068134.t1 MTR_3g014650 61.857 797 225 17 8 780 33 774 0.0 942
MS.gene068134.t1 MTR_8g039100 61.041 788 252 14 6 780 6 751 0.0 932
MS.gene068134.t1 MTR_3g073100 49.461 742 296 12 55 779 52 731 0.0 662
MS.gene068134.t1 MTR_3g073100 36.842 114 68 1 47 160 137 246 2.14e-14 77.8
MS.gene068134.t1 MTR_3g097260 49.384 731 288 14 55 779 50 704 0.0 630
MS.gene068134.t1 MTR_1g062740 43.495 784 365 16 56 776 47 815 0.0 605
MS.gene068134.t1 MTR_5g459450 48.350 697 304 16 106 779 69 732 0.0 572
MS.gene068134.t1 MTR_5g459450 62.424 165 62 0 55 219 64 228 9.25e-66 233
MS.gene068134.t1 MTR_8g088930 39.719 783 376 16 56 774 9 759 0.0 546
MS.gene068134.t1 MTR_8g088930 38.655 119 73 0 54 172 76 194 7.21e-18 89.0
MS.gene068134.t1 MTR_8g088930 39.668 784 376 16 56 774 9 760 0.0 546
MS.gene068134.t1 MTR_8g088930 38.655 119 73 0 54 172 76 194 7.22e-18 89.0
MS.gene068134.t1 MTR_8g095170 45.333 675 319 13 123 779 24 666 7.03e-176 521
MS.gene068134.t1 MTR_8g095170 58.101 179 73 2 58 235 28 205 4.87e-63 224
MS.gene068134.t1 MTR_8g095170 40.000 85 50 1 55 139 118 201 5.33e-11 66.6
MS.gene068134.t1 MTR_8g088930 41.653 617 304 12 56 647 9 594 5.68e-157 472
MS.gene068134.t1 MTR_8g088930 38.655 119 73 0 54 172 76 194 7.37e-18 88.6
MS.gene068134.t1 MTR_8g088930 41.653 617 304 12 56 647 9 594 7.12e-157 472
MS.gene068134.t1 MTR_8g088930 38.655 119 73 0 54 172 76 194 7.49e-18 88.6
MS.gene068134.t1 MTR_8g095170 45.640 539 255 11 123 643 24 542 7.98e-139 422
MS.gene068134.t1 MTR_8g095170 58.101 179 73 2 58 235 28 205 8.17e-63 221
MS.gene068134.t1 MTR_8g095170 40.000 85 50 1 55 139 118 201 7.07e-11 66.2
MS.gene068134.t1 MTR_8g080860 39.674 184 111 0 56 239 16 199 1.02e-34 134
MS.gene068134.t1 MTR_8g080860 35.758 165 104 1 54 216 104 268 4.93e-24 103
MS.gene068134.t1 MTR_8g080860 35.507 138 89 0 59 196 134 271 3.20e-17 83.2
MS.gene068134.t1 MTR_8g080860 39.674 184 111 0 56 239 12 195 1.50e-34 134
MS.gene068134.t1 MTR_8g080860 35.758 165 104 1 54 216 100 264 7.04e-24 102
MS.gene068134.t1 MTR_8g080860 35.507 138 89 0 59 196 130 267 4.45e-17 82.8
MS.gene068134.t1 MTR_4g107460 34.434 212 137 1 35 244 29 240 2.75e-32 129
MS.gene068134.t1 MTR_4g107460 37.778 180 111 1 62 240 11 190 6.93e-30 122
MS.gene068134.t1 MTR_4g107460 34.722 144 94 0 62 205 104 247 4.21e-20 92.8
MS.gene068134.t1 MTR_4g107460 39.000 100 60 1 148 246 5 104 4.40e-11 65.5
MS.gene068134.t1 MTR_8g092090 32.692 208 130 2 50 247 20 227 2.43e-29 117
MS.gene068134.t1 MTR_8g092090 30.726 179 113 1 38 205 53 231 2.65e-20 91.3
MS.gene068134.t1 MTR_8g092090 27.222 180 100 2 98 246 1 180 6.83e-15 75.5
MS.gene068134.t1 MTR_6g043150 38.021 192 118 1 57 247 7 198 4.11e-28 116
MS.gene068134.t1 MTR_6g043150 36.239 218 114 2 54 246 71 288 1.76e-27 114
MS.gene068134.t1 MTR_6g043150 36.813 182 115 0 54 235 142 323 2.88e-23 102
MS.gene068134.t1 MTR_6g043150 30.380 237 154 2 21 246 75 311 2.32e-21 96.3
MS.gene068134.t1 MTR_6g043150 43.103 116 66 0 54 169 211 326 7.71e-19 89.0
MS.gene068134.t1 MTR_7g451440 33.161 193 125 1 57 245 189 381 7.37e-27 115
MS.gene068134.t1 MTR_7g451440 33.673 196 123 2 81 273 190 381 9.57e-22 99.8
MS.gene068134.t1 MTR_8g007500 33.161 193 125 1 57 245 194 386 8.87e-27 115
MS.gene068134.t1 MTR_5g010840 34.071 226 111 2 59 246 111 336 5.90e-26 111
MS.gene068134.t1 MTR_5g010840 33.511 188 117 1 54 241 175 354 1.31e-24 107
MS.gene068134.t1 MTR_5g010840 38.793 116 71 0 45 160 250 365 7.15e-17 84.0
MS.gene068134.t1 MTR_5g010840 31.973 147 91 2 106 251 112 250 1.85e-13 73.6
MS.gene068134.t1 MTR_5g010840 30.323 155 108 0 55 209 214 368 2.81e-13 72.8
MS.gene068134.t1 MTR_4g099180 33.846 195 124 1 47 236 154 348 7.20e-26 111
MS.gene068134.t1 MTR_4g099180 32.961 179 117 1 81 256 170 348 2.38e-19 92.0
MS.gene068134.t1 MTR_8g080350 32.314 229 116 3 59 249 125 352 1.51e-25 110
MS.gene068134.t1 MTR_8g080350 31.544 149 87 2 54 187 189 337 1.54e-13 73.6
MS.gene068134.t1 MTR_8g080350 24.082 245 137 6 87 284 86 328 1.65e-11 67.4
MS.gene068134.t1 MTR_3g005910 64.865 74 24 1 502 575 1 72 1.31e-24 98.2
MS.gene068134.t1 MTR_2g078470 32.018 228 109 2 60 241 79 306 1.43e-24 107
MS.gene068134.t1 MTR_2g078470 30.901 233 160 1 54 285 142 374 2.70e-23 103
MS.gene068134.t1 MTR_2g078470 34.579 214 117 1 56 246 6 219 1.23e-21 98.2
MS.gene068134.t1 MTR_2g078470 33.152 184 123 0 58 241 54 237 2.39e-21 97.4
MS.gene068134.t1 MTR_2g078470 33.133 166 111 0 82 247 9 174 3.17e-14 75.5
MS.gene068134.t1 MTR_8g080340 38.298 141 86 1 56 196 16 155 6.84e-24 99.8
MS.gene068134.t1 MTR_8g080340 39.695 131 77 2 87 216 23 152 1.41e-20 90.1
MS.gene068134.t1 MTR_8g080340 35.507 138 89 0 107 244 20 157 3.69e-17 80.1
MS.gene068134.t1 MTR_8g080340 30.128 156 102 3 133 288 23 171 2.91e-15 74.7
MS.gene068134.t1 MTR_5g058920 30.131 229 153 2 6 230 142 367 2.19e-23 104
MS.gene068134.t1 MTR_5g058920 38.281 128 79 0 62 189 245 372 6.98e-19 90.5
MS.gene068134.t1 MTR_5g058920 33.540 161 107 0 81 241 195 355 4.20e-18 88.2
MS.gene068134.t1 MTR_5g058920 33.099 142 95 0 105 246 196 337 5.26e-13 72.4
MS.gene068134.t1 MTR_8g095240 34.673 199 97 2 65 230 9 207 3.07e-23 103
MS.gene068134.t1 MTR_8g095240 29.004 231 126 4 59 251 118 348 2.78e-16 82.4
MS.gene068134.t1 MTR_3g072650 29.060 234 159 3 1 230 125 355 6.22e-23 102
MS.gene068134.t1 MTR_3g072650 31.126 151 104 0 96 246 175 325 1.47e-14 77.0
MS.gene068134.t1 MTR_3g072650 29.060 234 159 3 1 230 125 355 1.14e-22 102
MS.gene068134.t1 MTR_3g072650 31.126 151 104 0 96 246 175 325 1.83e-14 77.0
MS.gene068134.t1 MTR_8g080310 33.557 149 99 0 82 230 9 157 2.59e-19 85.9
MS.gene068134.t1 MTR_8g080310 33.566 143 95 0 65 207 15 157 8.73e-17 78.6
MS.gene068134.t1 MTR_8g080310 33.099 142 95 0 99 240 3 144 2.06e-16 77.8
MS.gene068134.t1 MTR_4g099180 34.286 140 87 1 47 181 154 293 6.38e-17 82.8
MS.gene068134.t1 MTR_4g099180 33.333 129 77 1 67 195 165 284 1.83e-13 72.4
MS.gene068134.t1 MTR_4g099180 31.452 124 85 0 104 227 170 293 5.29e-13 71.2
MS.gene068134.t1 MTR_4g099180 35.000 140 86 1 47 181 154 293 9.66e-17 82.8
MS.gene068134.t1 MTR_4g099180 34.783 115 75 0 81 195 170 284 4.63e-13 71.6
MS.gene068134.t1 MTR_4g099180 30.645 124 86 0 104 227 170 293 2.52e-12 69.3
MS.gene068134.t1 MTR_3g023310 35.433 127 69 2 73 199 9 122 1.49e-13 70.1
MS.gene068134.t1 MTR_8g092410 32.331 133 86 3 96 224 145 277 4.63e-13 72.0
MS.gene068134.t1 MTR_8g092410 37.190 121 71 3 60 176 156 275 1.47e-11 67.4
MS.gene068134.t1 MTR_8g092410 29.747 158 92 4 98 248 133 278 4.35e-11 65.9
MS.gene068134.t1 MTR_1g112280 26.977 215 112 5 17 211 552 741 4.97e-13 73.2
MS.gene068134.t1 MTR_1g097110 33.831 201 105 11 456 639 1314 1503 1.53e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068134.t1 AT3G56960 68.125 800 214 10 1 780 1 779 0.0 1125
MS.gene068134.t1 AT3G56960 68.125 800 214 10 1 780 1 779 0.0 1125
MS.gene068134.t1 AT2G41210 68.262 794 215 9 2 780 1 772 0.0 1122
MS.gene068134.t1 AT3G07960 66.532 744 189 12 51 780 18 715 0.0 1006
MS.gene068134.t1 AT3G07960 64.561 649 170 12 51 685 18 620 0.0 839
MS.gene068134.t1 AT3G07960 65.434 622 160 10 51 658 18 598 0.0 823
MS.gene068134.t1 AT3G07960 65.434 622 160 10 51 658 18 598 0.0 823
MS.gene068134.t1 AT1G77740 53.753 746 260 14 55 779 72 753 0.0 732
MS.gene068134.t1 AT1G77740 40.000 90 54 0 49 138 158 247 9.39e-16 82.0
MS.gene068134.t1 AT1G77740 53.753 746 260 14 55 779 72 753 0.0 732
MS.gene068134.t1 AT1G77740 40.000 90 54 0 49 138 158 247 9.39e-16 82.0
MS.gene068134.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 590
MS.gene068134.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 590
MS.gene068134.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 590
MS.gene068134.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 590
MS.gene068134.t1 AT1G21980 48.773 693 294 14 130 779 77 751 0.0 581
MS.gene068134.t1 AT1G21980 61.798 178 68 0 55 232 71 248 1.46e-71 249
MS.gene068134.t1 AT1G21980 40.000 85 51 0 54 138 162 246 2.73e-14 77.4
MS.gene068134.t1 AT1G60890 40.180 779 398 12 55 780 18 781 0.0 573
MS.gene068134.t1 AT1G60890 40.102 783 401 12 51 780 2 769 0.0 573
MS.gene068134.t1 AT1G10900 39.457 773 395 13 55 779 6 753 0.0 546
MS.gene068134.t1 AT1G10900 35.664 143 92 0 98 240 3 145 2.11e-18 90.5
MS.gene068134.t1 AT1G10900 39.457 773 395 13 55 779 6 753 0.0 546
MS.gene068134.t1 AT1G10900 35.664 143 92 0 98 240 3 145 2.11e-18 90.5
MS.gene068134.t1 AT1G10900 39.457 773 395 13 55 779 6 753 0.0 546
MS.gene068134.t1 AT1G10900 35.664 143 92 0 98 240 3 145 2.11e-18 90.5
MS.gene068134.t1 AT2G26420 45.495 677 316 13 130 779 54 704 2.51e-175 521
MS.gene068134.t1 AT2G26420 54.054 185 85 0 51 235 44 228 2.14e-63 226
MS.gene068134.t1 AT2G26420 45.723 678 327 14 130 779 54 718 7.60e-175 520
MS.gene068134.t1 AT2G26420 54.054 185 85 0 51 235 44 228 1.65e-63 226
MS.gene068134.t1 AT2G26420 45.723 678 327 14 130 779 54 718 7.60e-175 520
MS.gene068134.t1 AT2G26420 54.054 185 85 0 51 235 44 228 1.65e-63 226
MS.gene068134.t1 AT4G01190 35.878 393 193 7 429 776 12 390 4.31e-69 233
MS.gene068134.t1 AT4G01190 36.041 394 191 8 429 776 22 400 7.72e-69 233
MS.gene068134.t1 AT4G01190 36.041 394 191 8 429 776 22 400 7.72e-69 233
MS.gene068134.t1 AT1G01460 41.629 221 124 3 422 642 13 228 1.36e-50 183
MS.gene068134.t1 AT1G01460 42.574 101 44 2 687 779 328 422 3.44e-16 82.4
MS.gene068134.t1 AT1G77660 32.086 187 127 0 44 230 162 348 1.42e-25 110
MS.gene068134.t1 AT1G77660 38.281 128 79 0 62 189 226 353 2.09e-19 92.0
MS.gene068134.t1 AT1G77660 32.386 176 119 0 77 252 172 347 2.33e-19 92.0
MS.gene068134.t1 AT2G35170 33.333 186 124 0 63 248 229 414 5.45e-25 109
MS.gene068134.t1 AT2G35170 33.193 238 143 7 58 294 210 432 2.32e-21 98.6
MS.gene068134.t1 AT1G21920 34.706 170 111 0 61 230 175 344 1.48e-24 106
MS.gene068134.t1 AT1G21920 32.632 190 124 1 77 266 168 353 1.07e-18 89.4
MS.gene068134.t1 AT1G21920 35.294 136 88 0 54 189 214 349 4.52e-18 87.4
MS.gene068134.t1 AT1G21920 34.706 170 111 0 61 230 175 344 1.49e-24 107
MS.gene068134.t1 AT1G21920 32.632 190 124 1 77 266 168 353 1.41e-18 89.4
MS.gene068134.t1 AT1G21920 35.294 136 88 0 54 189 214 349 5.51e-18 87.8
MS.gene068134.t1 AT4G17080 32.941 170 114 0 61 230 258 427 2.99e-24 107
MS.gene068134.t1 AT4G17080 29.018 224 147 2 67 287 250 464 9.53e-22 100
MS.gene068134.t1 AT4G17080 34.014 147 97 0 65 211 285 431 2.31e-20 95.9
MS.gene068134.t1 AT1G75010 32.061 131 80 3 88 211 602 730 4.58e-13 73.6

Find 224 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTGCCTCTTTGATTTCTT+TGG 0.110171 1.4:+36862930 None:intergenic
AATGGAGGAATGGGAGTATT+TGG 0.173763 1.4:-36863499 MS.gene068134:CDS
TTACATTGTGTCAAGTTAAA+TGG 0.204066 1.4:-36862166 MS.gene068134:CDS
AAGCGTGCAAATAGCATATT+TGG 0.241003 1.4:-36863974 MS.gene068134:CDS
TACTAATGGGGATACTTATA+AGG 0.245430 1.4:-36863663 MS.gene068134:CDS
CAAGTGATAGAATGCATTTA+TGG 0.272504 1.4:-36863094 MS.gene068134:CDS
TAGATGGGCAAGTATCAAAT+TGG 0.272979 1.4:-36861278 MS.gene068134:CDS
ATGGAGGAATGGGAGTATTT+GGG 0.273175 1.4:-36863498 MS.gene068134:CDS
TTGATTCCAAAGAGAAAGTA+TGG 0.274808 1.4:-36862704 MS.gene068134:CDS
GTTCATTTGTTTGGAGTAAT+GGG 0.280218 1.4:-36863469 MS.gene068134:CDS
CGGATGTGGAGGCGTATATT+TGG 0.281881 1.4:+36862659 None:intergenic
TCTAGTCCATACTTTCTCTT+TGG 0.288381 1.4:+36862698 None:intergenic
TCAATTTACAATTGGGAATC+AGG 0.288580 1.4:-36862866 MS.gene068134:intron
AAAATTCCCTCAGAACTCTT+AGG 0.292562 1.4:-36862512 MS.gene068134:intron
AGAATGGAGAAGGGGTTTGC+AGG 0.293211 1.4:-36863570 MS.gene068134:CDS
CGACAGGGACTGTGAGCTTC+TGG 0.298065 1.4:-36861654 MS.gene068134:CDS
AAATGGACCTTCTCAGAAAA+AGG 0.301997 1.4:-36862149 MS.gene068134:intron
CAGGTACGATTTATCATAAT+GGG 0.302975 1.4:-36861992 MS.gene068134:CDS
TCAGGTACGATTTATCATAA+TGG 0.305456 1.4:-36861993 MS.gene068134:intron
TTAAAAGTTCCATTCCCTTT+AGG 0.308983 1.4:+36863413 None:intergenic
GGGAAGATGGTTTGCCTAAA+GGG 0.309677 1.4:-36863427 MS.gene068134:CDS
TCTGGAACAGGAGGGAATTA+TGG 0.310567 1.4:-36861636 MS.gene068134:CDS
GAAGGAGATCTTATTCCTTC+AGG 0.311223 1.4:-36861569 MS.gene068134:CDS
GGAAGGTTCACTTGGCCTTC+AGG 0.314076 1.4:-36863746 MS.gene068134:CDS
GGAGTTCAAGAGTGGTTATA+TGG 0.324022 1.4:-36863708 MS.gene068134:CDS
AAGATGAGAACTATTATATT+GGG 0.327508 1.4:-36863523 MS.gene068134:CDS
GGAATAGGTATGATGGCTAT+TGG 0.329268 1.4:-36863448 MS.gene068134:CDS
CCTAATGGAGATTACTATAA+AGG 0.342048 1.4:-36863869 MS.gene068134:CDS
AAAGATGAGAACTATTATAT+TGG 0.343138 1.4:-36863524 MS.gene068134:CDS
GGGGTAAAGGTTCATTTGTT+TGG 0.347168 1.4:-36863478 MS.gene068134:CDS
CGCAAGAGGGTCATCTTGAT+TGG 0.353038 1.4:-36863298 MS.gene068134:CDS
AACTTCTGCTAGATCCTTCC+AGG 0.357718 1.4:-36861381 MS.gene068134:intron
TTGTTTGGAGTAATGGGAAT+AGG 0.360376 1.4:-36863463 MS.gene068134:CDS
GCTCATGCTCAATTTACAAT+TGG 0.362297 1.4:-36862874 MS.gene068134:CDS
ATTCTTGTGTCCTTTGCATA+TGG 0.366334 1.4:+36862902 None:intergenic
AGGCGTATATTTGGATCCTT+CGG 0.367813 1.4:+36862668 None:intergenic
GTGCATACACTGCTACTAAT+GGG 0.376993 1.4:-36863676 MS.gene068134:CDS
GGTTCATTTGTTTGGAGTAA+TGG 0.378193 1.4:-36863470 MS.gene068134:CDS
CCTTTATAGTAATCTCCATT+AGG 0.378650 1.4:+36863869 None:intergenic
GGTGCATACACTGCTACTAA+TGG 0.379224 1.4:-36863677 MS.gene068134:CDS
GCATCCACTGACATTCTTCT+CGG 0.385623 1.4:+36863146 None:intergenic
GATTTGAAGGGTTCTTCACT+TGG 0.386077 1.4:-36861929 MS.gene068134:CDS
GAGATAAGTATGAGGGAGAA+TGG 0.398925 1.4:-36863586 MS.gene068134:CDS
GGCGTATATTTGGATCCTTC+GGG 0.400723 1.4:+36862669 None:intergenic
GGTGCTTTCAAAGTTTGTCT+TGG 0.403471 1.4:+36862951 None:intergenic
GAATAGGTATGATGGCTATT+GGG 0.408479 1.4:-36863447 MS.gene068134:CDS
GTCATATTGAATGGACTTGT+AGG 0.409501 1.4:+36861096 None:intergenic
CATGTCTTCTCGTGAAATAC+GGG 0.411112 1.4:+36861408 None:intergenic
CTGCGTGAACTTTCTTCGCC+TGG 0.413219 1.4:-36862432 MS.gene068134:CDS
CCATGTCTTCTCGTGAAATA+CGG 0.420600 1.4:+36861407 None:intergenic
TATGTTCCACTCTGATCTCT+TGG 0.423850 1.4:+36863347 None:intergenic
GTTTCAGTAATCTCTGACTC+AGG 0.427126 1.4:+36861890 None:intergenic
CTCATGCTCAATTTACAATT+GGG 0.427873 1.4:-36862873 MS.gene068134:CDS
GGACTGTGAGCTTCTGGAAC+AGG 0.430564 1.4:-36861648 MS.gene068134:CDS
TATTTCGACTACAACGATCT+TGG 0.431632 1.4:-36861835 MS.gene068134:CDS
ATCCGTCCAGTGAGTTCAAA+TGG 0.435350 1.4:-36862641 MS.gene068134:CDS
GAATGCATTTATGGGGCGGC+GGG 0.442405 1.4:-36863085 MS.gene068134:CDS
TTATGTAGGTAATTGGAGTA+AGG 0.442669 1.4:-36863372 MS.gene068134:CDS
GCAGAGAGGGTTCTACCTAA+TGG 0.444056 1.4:-36863884 MS.gene068134:CDS
ACGGGAAAGGGAAGTACTTA+TGG 0.445335 1.4:-36863823 MS.gene068134:CDS
AAGTGATAGAATGCATTTAT+GGG 0.445755 1.4:-36863093 MS.gene068134:CDS
ACCAAAGAAATCAAAGAGGC+AGG 0.446584 1.4:-36862931 MS.gene068134:CDS
GAGATTACTATAAAGGAGAA+TGG 0.447048 1.4:-36863862 MS.gene068134:CDS
ACATAGACGCTTTGATTTGA+AGG 0.448858 1.4:-36861942 MS.gene068134:CDS
ACCTCATAGTACTCTCCAAT+TGG 0.449728 1.4:+36861184 None:intergenic
CAAATCAAAGCGTCTATGTA+TGG 0.450308 1.4:+36861946 None:intergenic
CATTTATGGGGCGGCGGGGA+AGG 0.451650 1.4:-36863080 MS.gene068134:CDS
TATGATGGCTATTGGGAAGA+TGG 0.455519 1.4:-36863440 MS.gene068134:CDS
ATATTGGGGAATGGAGGAAT+GGG 0.458059 1.4:-36863508 MS.gene068134:CDS
TATATTGGGGAATGGAGGAA+TGG 0.460284 1.4:-36863509 MS.gene068134:CDS
TGGGAAGATGGTTTGCCTAA+AGG 0.464773 1.4:-36863428 MS.gene068134:CDS
AGTGGTTATATGGATGGAAT+AGG 0.464894 1.4:-36863698 MS.gene068134:CDS
CTCTTGCGATTGCGATGACC+CGG 0.466168 1.4:+36863313 None:intergenic
CATAAATGCATTCTATCACT+TGG 0.466407 1.4:+36863095 None:intergenic
AGAAGAATGTCAGTGGATGC+AGG 0.469195 1.4:-36863143 MS.gene068134:CDS
CGAGGTTGGGTCATATTGAA+TGG 0.469231 1.4:+36861087 None:intergenic
GAAGGAATAAGATCTCCTTC+TGG 0.470635 1.4:+36861572 None:intergenic
GGATCTCATACTCCACTTGA+TGG 0.471875 1.4:-36861548 MS.gene068134:intron
AACTCATGATCATCTTTAGT+TGG 0.472630 1.4:+36863005 None:intergenic
TCATTGTCTTAATCATATAA+CGG 0.474615 1.4:+36862373 None:intergenic
AATCATATAACGGTCATCAT+TGG 0.476059 1.4:+36862383 None:intergenic
CCGTATTTCACGAGAAGACA+TGG 0.478125 1.4:-36861407 MS.gene068134:CDS
AACTCTTAGGAAGCTATTCA+AGG 0.480921 1.4:-36862499 MS.gene068134:CDS
CCTTCAGGACCAGCTTATGA+AGG 0.481439 1.4:-36863731 MS.gene068134:CDS
AAAGATGATCATGAGTTGCT+TGG 0.483527 1.4:-36862999 MS.gene068134:CDS
ATAACTTCCCGCACGGGAAA+GGG 0.484725 1.4:-36863835 MS.gene068134:CDS
GTCCTTCCATTTGAACTCAC+TGG 0.484867 1.4:+36862635 None:intergenic
GTATGAGGGAGAATGGAGAA+GGG 0.485541 1.4:-36863579 MS.gene068134:CDS
CGAAAATGATTGTAATAAGC+GGG 0.486540 1.4:+36862226 None:intergenic
ACTGTCCTTTCAACCCGTGC+TGG 0.490246 1.4:+36861244 None:intergenic
AGTACTTCCCTTTCCCGTGC+GGG 0.493055 1.4:+36863828 None:intergenic
GATAACTTCCCGCACGGGAA+AGG 0.493289 1.4:-36863836 MS.gene068134:CDS
AAACGCCTTGAGTATTGCCT+TGG 0.495418 1.4:+36861049 None:intergenic
GATGGTAATAGAACTCCAAC+TGG 0.495992 1.4:-36863056 MS.gene068134:CDS
ACTAATGGGGATACTTATAA+GGG 0.499615 1.4:-36863662 MS.gene068134:CDS
AGTATGAGGGAGAATGGAGA+AGG 0.501294 1.4:-36863580 MS.gene068134:CDS
TCAACGGCTGAAATCGAGGT+TGG 0.505835 1.4:+36861073 None:intergenic
TTCGAATGGAGATAAGTATG+AGG 0.509090 1.4:-36863594 MS.gene068134:CDS
AGTGAGTATCAAGTTAGTCC+TGG 0.511916 1.4:-36863248 MS.gene068134:CDS
ACTGGTAATAGAACTCCAAC+TGG 0.513152 1.4:-36863038 MS.gene068134:CDS
AATGGGAGTATTTGGGGTAA+AGG 0.513194 1.4:-36863491 MS.gene068134:CDS
GATGTATATATGTCGGAGAA+TGG 0.513464 1.4:-36863793 MS.gene068134:CDS
TCGAAAATGATTGTAATAAG+CGG 0.514277 1.4:+36862225 None:intergenic
TGAGTATTGCCTTGGATCAA+CGG 0.514920 1.4:+36861057 None:intergenic
ATGATCACAGGCAAATCGAC+AGG 0.515970 1.4:-36861670 MS.gene068134:intron
TTGAACTCCCCTTCATAAGC+TGG 0.516325 1.4:+36863722 None:intergenic
TCAAGTTAGTCCTGGGGAGA+AGG 0.516462 1.4:-36863240 MS.gene068134:CDS
AGATGGGCAAGTATCAAATT+GGG 0.517493 1.4:-36861277 MS.gene068134:CDS
GGAACATATTATCCTTCTCC+CGG 0.517707 1.4:-36863332 MS.gene068134:CDS
GCAAGAGGGTCATCTTGATT+GGG 0.517961 1.4:-36863297 MS.gene068134:CDS
AGATTACTATAAAGGAGAAT+GGG 0.528597 1.4:-36863861 MS.gene068134:CDS
CATAGACGCTTTGATTTGAA+GGG 0.529755 1.4:-36861941 MS.gene068134:CDS
TTCAAGAGTGGTTATATGGA+TGG 0.530449 1.4:-36863704 MS.gene068134:CDS
CAACGGCTGAAATCGAGGTT+GGG 0.531000 1.4:+36861074 None:intergenic
GATGCAGGGAGGGCAAGTGT+AGG 0.531839 1.4:-36863128 MS.gene068134:CDS
CGATTTCAGCCGTTGATCCA+AGG 0.531996 1.4:-36861066 MS.gene068134:CDS
GATTACATGTTATCTATATG+TGG 0.538155 1.4:-36862465 MS.gene068134:CDS
TAAAGACAGTAGTATGATGA+AGG 0.538744 1.4:-36864038 MS.gene068134:CDS
TGGGGCGGCGGGGAAGGTGA+TGG 0.539051 1.4:-36863074 MS.gene068134:CDS
AGGGGTTTGCAGGATGGACA+AGG 0.539233 1.4:-36863560 MS.gene068134:CDS
ACAGTAGTATGATGAAGGCA+TGG 0.540566 1.4:-36864033 MS.gene068134:CDS
GTGAGTATCAAGTTAGTCCT+GGG 0.541149 1.4:-36863247 MS.gene068134:CDS
AGAACTATTATATTGGGGAA+TGG 0.542557 1.4:-36863517 MS.gene068134:CDS
ATGGACTATAGTCTACTAGT+TGG 0.542989 1.4:-36861617 MS.gene068134:CDS
GCATATAATAGGCATTCTGT+TGG 0.543355 1.4:-36862771 MS.gene068134:intron
CCTTCATAAGCTGGTCCTGA+AGG 0.544182 1.4:+36863731 None:intergenic
TTGAACTCACTGGACGGATG+TGG 0.545333 1.4:+36862645 None:intergenic
TATGAGGGAGAATGGAGAAG+GGG 0.546679 1.4:-36863578 MS.gene068134:CDS
GGATACTTATAAGGGACAAT+GGG 0.546935 1.4:-36863654 MS.gene068134:CDS
TGGAGAAGGGGTTTGCAGGA+TGG 0.547536 1.4:-36863566 MS.gene068134:CDS
GATGAAGGCATGGGAGGCCA+CGG 0.548146 1.4:-36864023 MS.gene068134:CDS
AGTAATGGGAATAGGTATGA+TGG 0.548558 1.4:-36863455 MS.gene068134:CDS
ATGTAAAATAACAAAATGAT+GGG 0.549385 1.4:-36864061 None:intergenic
TCTTTGGAATCAAAAGCTGA+AGG 0.549760 1.4:+36862714 None:intergenic
CAACTCGTAGGAGAACCAAT+TGG 0.552371 1.4:-36861199 MS.gene068134:CDS
TGGGAAAGGGAAGGTTCACT+TGG 0.554254 1.4:-36863754 MS.gene068134:CDS
ATGCAGGGAGGGCAAGTGTA+GGG 0.554397 1.4:-36863127 MS.gene068134:CDS
ATTTGAAGGGTTCTTCACTT+GGG 0.558907 1.4:-36861928 MS.gene068134:CDS
GTTGGAGTTCTACTACCAGT+TGG 0.560041 1.4:+36863023 None:intergenic
ATATGCCAGCACGGGTTGAA+AGG 0.562062 1.4:-36861249 MS.gene068134:CDS
CCAAAGAAATCAAAGAGGCA+GGG 0.564458 1.4:-36862930 MS.gene068134:CDS
TGGAGGAATGGGAGTATTTG+GGG 0.565397 1.4:-36863497 MS.gene068134:CDS
AATGTCAGTGGATGCAGGGA+GGG 0.565624 1.4:-36863138 MS.gene068134:CDS
AACTCAGTATACACTTGTTG+TGG 0.565787 1.4:+36863272 None:intergenic
GATGGTTTGCCTAAAGGGAA+TGG 0.567377 1.4:-36863422 MS.gene068134:CDS
CGGGTCATCGCAATCGCAAG+AGG 0.568227 1.4:-36863312 MS.gene068134:CDS
GATTGCGATGACCCGGGAGA+AGG 0.568916 1.4:+36863320 None:intergenic
TATGTCGGAGAATGGTTCAA+AGG 0.568996 1.4:-36863785 MS.gene068134:CDS
GGGAAGTACTTATGGACAGA+TGG 0.569579 1.4:-36863815 MS.gene068134:CDS
AGAATGCATTTATGGGGCGG+CGG 0.572872 1.4:-36863086 MS.gene068134:CDS
AAAACTGAAACCTTCTCCCC+AGG 0.574665 1.4:+36863230 None:intergenic
CTGTGAGCTTCTGGAACAGG+AGG 0.574774 1.4:-36861645 MS.gene068134:CDS
TCGAATGGAGATAAGTATGA+GGG 0.575640 1.4:-36863593 MS.gene068134:CDS
CTTCAGGACCAGCTTATGAA+GGG 0.577362 1.4:-36863730 MS.gene068134:CDS
ACTATTATATTGGGGAATGG+AGG 0.581377 1.4:-36863514 MS.gene068134:CDS
AGATCATGAAGAAGAAAGCA+AGG 0.581465 1.4:-36863924 MS.gene068134:CDS
TTCCATTTGAACTCACTGGA+CGG 0.581661 1.4:+36862639 None:intergenic
ACTGCAAGTCTCTTCTGTGA+TGG 0.584436 1.4:+36863206 None:intergenic
CGAAAGACATGTGACCTGGA+AGG 0.585910 1.4:+36861367 None:intergenic
GAAGAATGTCAGTGGATGCA+GGG 0.586181 1.4:-36863142 MS.gene068134:CDS
GGGAGTGAATATGCCAGCAC+GGG 0.590690 1.4:-36861257 MS.gene068134:CDS
GTTGGAGTTCTATTACCAGT+TGG 0.592917 1.4:+36863041 None:intergenic
GGGATACTTATAAGGGACAA+TGG 0.593729 1.4:-36863655 MS.gene068134:CDS
TGCAGTGTGGAGGTCTACCA+AGG 0.596941 1.4:-36863189 MS.gene068134:CDS
GTCCAGTGAGTTCAAATGGA+AGG 0.597571 1.4:-36862637 MS.gene068134:CDS
AGATGAGAACTATTATATTG+GGG 0.598798 1.4:-36863522 MS.gene068134:CDS
CAGTAGTATGATGAAGGCAT+GGG 0.599597 1.4:-36864032 MS.gene068134:CDS
AACTCACTGGACGGATGTGG+AGG 0.600098 1.4:+36862648 None:intergenic
ACCAATTGGAGAGTACTATG+AGG 0.601964 1.4:-36861185 MS.gene068134:CDS
TTGATCCAAGGCAATACTCA+AGG 0.602133 1.4:-36861054 MS.gene068134:CDS
AAGAAGTATACCATGCAGAG+AGG 0.602501 1.4:-36863898 MS.gene068134:CDS
GCAGTGTGGAGGTCTACCAA+GGG 0.603480 1.4:-36863188 MS.gene068134:CDS
TTCAGATCTAAAGATGCTGA+GGG 0.605765 1.4:+36862738 None:intergenic
TGGATCAACGGCTGAAATCG+AGG 0.606222 1.4:+36861069 None:intergenic
ATGAATTTGAAACATGGTCA+TGG 0.607160 1.4:-36863629 MS.gene068134:CDS
TGGGAGTGAATATGCCAGCA+CGG 0.608917 1.4:-36861258 MS.gene068134:CDS
TTCAAAGATATATCACCAGA+AGG 0.612199 1.4:-36861587 MS.gene068134:CDS
TTTCAGATCTAAAGATGCTG+AGG 0.615317 1.4:+36862737 None:intergenic
AATGCATTTATGGGGCGGCG+GGG 0.616007 1.4:-36863084 MS.gene068134:CDS
GAACATATTATCCTTCTCCC+GGG 0.616837 1.4:-36863331 MS.gene068134:CDS
ACATATGTAGCTTCACAACA+TGG 0.618739 1.4:-36863947 MS.gene068134:CDS
CAGATCTAAAGATGCTGAGG+GGG 0.619054 1.4:+36862740 None:intergenic
TAGTATGATGAAGGCATGGG+AGG 0.619872 1.4:-36864029 MS.gene068134:CDS
ACAGATGGATGTATATATGT+CGG 0.620518 1.4:-36863800 MS.gene068134:CDS
TAGGTAGAACCCTCTCTGCA+TGG 0.622199 1.4:+36863888 None:intergenic
TGGACTAGATTTCCTCCCGA+AGG 0.625505 1.4:-36862684 MS.gene068134:CDS
AGAAGTATACCATGCAGAGA+GGG 0.629096 1.4:-36863897 MS.gene068134:CDS
AGAAGAGACTTGCAGTGTGG+AGG 0.631008 1.4:-36863199 MS.gene068134:CDS
GGGTTGATAACTTCCCGCAC+GGG 0.633125 1.4:-36863841 MS.gene068134:CDS
TGGGTTGATAACTTCCCGCA+CGG 0.634421 1.4:-36863842 MS.gene068134:CDS
GGTGAGACGAGTTATTCGAA+TGG 0.634490 1.4:-36863608 MS.gene068134:CDS
AGGCGAAGAAAGTTCACGCA+GGG 0.634632 1.4:+36862434 None:intergenic
ATGGACAAGGGAGATATGAG+TGG 0.639995 1.4:-36863547 MS.gene068134:CDS
TCTTGCGATTGCGATGACCC+GGG 0.643446 1.4:+36863314 None:intergenic
GGGGTTTGCAGGATGGACAA+GGG 0.643828 1.4:-36863559 MS.gene068134:CDS
TATGAAGGGGAGTTCAAGAG+TGG 0.648354 1.4:-36863716 MS.gene068134:CDS
TTCAGGACCAGCTTATGAAG+GGG 0.648838 1.4:-36863729 MS.gene068134:CDS
TGATCACAGGCAAATCGACA+GGG 0.649507 1.4:-36861669 MS.gene068134:intron
GTATATTTGGATCCTTCGGG+AGG 0.651164 1.4:+36862672 None:intergenic
GATAGAATGCATTTATGGGG+CGG 0.654237 1.4:-36863089 MS.gene068134:CDS
TGCATACACTGCTACTAATG+GGG 0.655254 1.4:-36863675 MS.gene068134:CDS
CAGGGAGAGACCATATGCAA+AGG 0.660979 1.4:-36862912 MS.gene068134:CDS
AGTGATAGAATGCATTTATG+GGG 0.661374 1.4:-36863092 MS.gene068134:CDS
GGGTCATCGCAATCGCAAGA+GGG 0.662210 1.4:-36863311 MS.gene068134:CDS
AAGTACTTCCCTTTCCCGTG+CGG 0.662542 1.4:+36863827 None:intergenic
GATTGTGAATTGCAACTCGT+AGG 0.664829 1.4:-36861211 MS.gene068134:CDS
TAAGACAATGAAGAAAGCTG+AGG 0.665400 1.4:-36862361 MS.gene068134:CDS
CACAGAAGAGACTTGCAGTG+TGG 0.670218 1.4:-36863202 MS.gene068134:CDS
CAGGCGAAGAAAGTTCACGC+AGG 0.671558 1.4:+36862433 None:intergenic
AGTGGAGTATGAGATCCTGA+AGG 0.680944 1.4:+36861554 None:intergenic
TGGGTAATGAATTTGAAACA+TGG 0.687560 1.4:-36863635 MS.gene068134:CDS
GAATGTCAGTGGATGCAGGG+AGG 0.688706 1.4:-36863139 MS.gene068134:CDS
TCTTAGGAAGCTATTCAAGG+TGG 0.689065 1.4:-36862496 MS.gene068134:CDS
TGTGAGCTTCTGGAACAGGA+GGG 0.689457 1.4:-36861644 MS.gene068134:CDS
GGCCACGGTGAAGAAGACAC+AGG 0.692992 1.4:-36864008 MS.gene068134:CDS
AAGGATCCAAGAGATCAGAG+TGG 0.693035 1.4:-36863353 MS.gene068134:CDS
AAGCACCAAAGAAATCAAAG+AGG 0.693395 1.4:-36862935 MS.gene068134:CDS
CAGTGTGGAGGTCTACCAAG+GGG 0.694503 1.4:-36863187 MS.gene068134:CDS
ATGTCTTCTCGTGAAATACG+GGG 0.697359 1.4:+36861409 None:intergenic
TGAGTATCAAGTTAGTCCTG+GGG 0.698062 1.4:-36863246 MS.gene068134:CDS
TAAGCCGAGAAGAATGTCAG+TGG 0.727725 1.4:-36863150 MS.gene068134:CDS
AGTGTGGAGGTCTACCAAGG+GGG 0.727979 1.4:-36863186 MS.gene068134:CDS
TCAGATCTAAAGATGCTGAG+GGG 0.729081 1.4:+36862739 None:intergenic
TGCCTGTGTCTTCTTCACCG+TGG 0.733834 1.4:+36864006 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTCCTAGAAAAATAATT+TGG - chr1.4:36863586-36863605 MS.gene068134:CDS 15.0%
!! ATCAATTATAATATGCAAAA+GGG + chr1.4:36862500-36862519 None:intergenic 15.0%
!! TTATAAAATTTATGGATTTC+AGG - chr1.4:36863044-36863063 MS.gene068134:CDS 15.0%
!!! TAATTTGGATGTTAAATTTT+AGG - chr1.4:36863601-36863620 MS.gene068134:CDS 15.0%
!!! TTATTAGCATAATATTGATT+TGG - chr1.4:36862766-36862785 MS.gene068134:intron 15.0%
!! AAAGATGAGAACTATTATAT+TGG - chr1.4:36861531-36861550 MS.gene068134:intron 20.0%
!! AAGATGAGAACTATTATATT+GGG - chr1.4:36861532-36861551 MS.gene068134:intron 20.0%
!! AGACAAGATATATACTATTA+CGG + chr1.4:36863545-36863564 None:intergenic 20.0%
!! ATTGTATATTTGTTTGTAGA+TGG - chr1.4:36863761-36863780 MS.gene068134:CDS 20.0%
!! GATCAATTATAATATGCAAA+AGG + chr1.4:36862501-36862520 None:intergenic 20.0%
!! TATATAACAAACACATGATA+TGG + chr1.4:36863366-36863385 None:intergenic 20.0%
!! TCATTGTCTTAATCATATAA+CGG + chr1.4:36862685-36862704 None:intergenic 20.0%
!! TTGTATATTTGTTTGTAGAT+GGG - chr1.4:36863762-36863781 MS.gene068134:CDS 20.0%
!!! AACATCCAAATTATTTTTCT+AGG + chr1.4:36863594-36863613 None:intergenic 20.0%
!!! AATTTAGATCAAGATCTTTT+AGG + chr1.4:36863197-36863216 None:intergenic 20.0%
!!! ATTTCTTATTCTTTTCAAGA+AGG + chr1.4:36863339-36863358 None:intergenic 20.0%
! AAAAATCGTCTACAACATTT+AGG + chr1.4:36862936-36862955 None:intergenic 25.0%
! AAGTGATAGAATGCATTTAT+GGG - chr1.4:36861962-36861981 MS.gene068134:CDS 25.0%
! AGATGAGAACTATTATATTG+GGG - chr1.4:36861533-36861552 MS.gene068134:intron 25.0%
! AGATTACTATAAAGGAGAAT+GGG - chr1.4:36861194-36861213 MS.gene068134:CDS 25.0%
! ATAAGAAAAATACCATCAAG+TGG + chr1.4:36863522-36863541 None:intergenic 25.0%
! ATTAACTACCTAAAAACTAC+TGG + chr1.4:36862452-36862471 None:intergenic 25.0%
! GATTACATGTTATCTATATG+TGG - chr1.4:36862590-36862609 MS.gene068134:intron 25.0%
! TCGAAAATGATTGTAATAAG+CGG + chr1.4:36862833-36862852 None:intergenic 25.0%
! TTAACTACCTAAAAACTACT+GGG + chr1.4:36862451-36862470 None:intergenic 25.0%
! TTACATTGTGTCAAGTTAAA+TGG - chr1.4:36862889-36862908 MS.gene068134:CDS 25.0%
! TTACTAGTATCTATCCTTAT+AGG - chr1.4:36862979-36862998 MS.gene068134:CDS 25.0%
!! GAAGTTTTTATGTAGGTAAT+TGG - chr1.4:36861676-36861695 MS.gene068134:intron 25.0%
!! TAATTTTCTTATCGAAACCA+AGG - chr1.4:36862735-36862754 MS.gene068134:CDS 25.0%
!!! ATTTTTCTAGGAATTTAACG+AGG + chr1.4:36863582-36863601 None:intergenic 25.0%
!!! TAAATTTTAGGTGATTCAGA+GGG - chr1.4:36863613-36863632 MS.gene068134:CDS 25.0%
!!! TGTTTGTTATATATGATCAC+AGG - chr1.4:36863373-36863392 MS.gene068134:CDS 25.0%
!!! TTAAATTTTAGGTGATTCAG+AGG - chr1.4:36863612-36863631 MS.gene068134:CDS 25.0%
!!! TTTGAGTTGTTGCATATAAT+AGG - chr1.4:36862273-36862292 MS.gene068134:intron 25.0%
AAAGGAAAAACTATGGGAAA+GGG - chr1.4:36861288-36861307 MS.gene068134:intron 30.0%
AACTCATGATCATCTTTAGT+TGG + chr1.4:36862053-36862072 None:intergenic 30.0%
AATCATATAACGGTCATCAT+TGG + chr1.4:36862675-36862694 None:intergenic 30.0%
ACAGATGGATGTATATATGT+CGG - chr1.4:36861255-36861274 MS.gene068134:CDS 30.0%
ACTAATGGGGATACTTATAA+GGG - chr1.4:36861393-36861412 MS.gene068134:CDS 30.0%
AGAACTATTATATTGGGGAA+TGG - chr1.4:36861538-36861557 MS.gene068134:intron 30.0%
AGTGATAGAATGCATTTATG+GGG - chr1.4:36861963-36861982 MS.gene068134:CDS 30.0%
ATGGTTCAAAGGAAAAACTA+TGG - chr1.4:36861281-36861300 MS.gene068134:intron 30.0%
CAAGTGATAGAATGCATTTA+TGG - chr1.4:36861961-36861980 MS.gene068134:CDS 30.0%
CAGGTACGATTTATCATAAT+GGG - chr1.4:36863063-36863082 MS.gene068134:CDS 30.0%
CATAAATGCATTCTATCACT+TGG + chr1.4:36861963-36861982 None:intergenic 30.0%
CCTAATGGAGATTACTATAA+AGG - chr1.4:36861186-36861205 MS.gene068134:CDS 30.0%
CCTTTATAGTAATCTCCATT+AGG + chr1.4:36861189-36861208 None:intergenic 30.0%
CGAAAATGATTGTAATAAGC+GGG + chr1.4:36862832-36862851 None:intergenic 30.0%
CTCATGCTCAATTTACAATT+GGG - chr1.4:36862182-36862201 MS.gene068134:CDS 30.0%
GAAATGTATGCTTTCCTATA+AGG + chr1.4:36862996-36863015 None:intergenic 30.0%
GAGATTACTATAAAGGAGAA+TGG - chr1.4:36861193-36861212 MS.gene068134:CDS 30.0%
TAAAGACAGTAGTATGATGA+AGG - chr1.4:36861017-36861036 MS.gene068134:CDS 30.0%
TACTAATGGGGATACTTATA+AGG - chr1.4:36861392-36861411 MS.gene068134:CDS 30.0%
TCAATTTACAATTGGGAATC+AGG - chr1.4:36862189-36862208 MS.gene068134:CDS 30.0%
TCAGGTACGATTTATCATAA+TGG - chr1.4:36863062-36863081 MS.gene068134:CDS 30.0%
TGGTATACTCAGAACAAAAA+AGG + chr1.4:36863092-36863111 None:intergenic 30.0%
TGGTTCAAAGGAAAAACTAT+GGG - chr1.4:36861282-36861301 MS.gene068134:intron 30.0%
TTAAAAGTTCCATTCCCTTT+AGG + chr1.4:36861645-36861664 None:intergenic 30.0%
TTATGTAGGTAATTGGAGTA+AGG - chr1.4:36861683-36861702 MS.gene068134:intron 30.0%
TTCAAAGATATATCACCAGA+AGG - chr1.4:36863468-36863487 MS.gene068134:CDS 30.0%
TTGATTCCAAAGAGAAAGTA+TGG - chr1.4:36862351-36862370 MS.gene068134:intron 30.0%
! AAGGGAATGGAACTTTTAAA+TGG - chr1.4:36861646-36861665 MS.gene068134:CDS 30.0%
! AGGGAATGGAACTTTTAAAT+GGG - chr1.4:36861647-36861666 MS.gene068134:CDS 30.0%
! ATGAATTTGAAACATGGTCA+TGG - chr1.4:36861426-36861445 MS.gene068134:CDS 30.0%
! GTTCATTTGTTTGGAGTAAT+GGG - chr1.4:36861586-36861605 MS.gene068134:CDS 30.0%
! TGGGTAATGAATTTGAAACA+TGG - chr1.4:36861420-36861439 MS.gene068134:CDS 30.0%
!! AAATTTTAGGTGATTCAGAG+GGG - chr1.4:36863614-36863633 MS.gene068134:CDS 30.0%
!! TAGATCAAGATCTTTTAGGA+TGG + chr1.4:36863193-36863212 None:intergenic 30.0%
!!! ACATGCTGATTTTATTTTGC+AGG - chr1.4:36862789-36862808 MS.gene068134:intron 30.0%
!!! CTTGGTTTTTAGAATTTTGC+AGG - chr1.4:36863238-36863257 MS.gene068134:CDS 30.0%
!!! TATGAGGTTGTCTTGTTTTT+CGG - chr1.4:36863886-36863905 MS.gene068134:CDS 30.0%
AAAATTCCCTCAGAACTCTT+AGG - chr1.4:36862543-36862562 MS.gene068134:intron 35.0%
AAAGATGATCATGAGTTGCT+TGG - chr1.4:36862056-36862075 MS.gene068134:intron 35.0%
AAATGGACCTTCTCAGAAAA+AGG - chr1.4:36862906-36862925 MS.gene068134:CDS 35.0%
AACTCTTAGGAAGCTATTCA+AGG - chr1.4:36862556-36862575 MS.gene068134:intron 35.0%
AAGCACCAAAGAAATCAAAG+AGG - chr1.4:36862120-36862139 MS.gene068134:intron 35.0%
AAGCGTGCAAATAGCATATT+TGG - chr1.4:36861081-36861100 MS.gene068134:CDS 35.0%
ACATATGTAGCTTCACAACA+TGG - chr1.4:36861108-36861127 MS.gene068134:CDS 35.0%
ACTATTATATTGGGGAATGG+AGG - chr1.4:36861541-36861560 MS.gene068134:intron 35.0%
AGATCATGAAGAAGAAAGCA+AGG - chr1.4:36861131-36861150 MS.gene068134:CDS 35.0%
AGATGGGCAAGTATCAAATT+GGG - chr1.4:36863778-36863797 MS.gene068134:CDS 35.0%
AGTGGTTATATGGATGGAAT+AGG - chr1.4:36861357-36861376 MS.gene068134:intron 35.0%
ATTCTTGTGTCCTTTGCATA+TGG + chr1.4:36862156-36862175 None:intergenic 35.0%
ATTTGAAGGGTTCTTCACTT+GGG - chr1.4:36863127-36863146 MS.gene068134:CDS 35.0%
CAAAGGAAAAACTATGGGAA+AGG - chr1.4:36861287-36861306 MS.gene068134:intron 35.0%
GAATAGGTATGATGGCTATT+GGG - chr1.4:36861608-36861627 MS.gene068134:CDS 35.0%
GATGTATATATGTCGGAGAA+TGG - chr1.4:36861262-36861281 MS.gene068134:CDS 35.0%
GCATATAATAGGCATTCTGT+TGG - chr1.4:36862284-36862303 MS.gene068134:intron 35.0%
GCTCATGCTCAATTTACAAT+TGG - chr1.4:36862181-36862200 MS.gene068134:CDS 35.0%
GGATACTTATAAGGGACAAT+GGG - chr1.4:36861401-36861420 MS.gene068134:CDS 35.0%
TAAGACAATGAAGAAAGCTG+AGG - chr1.4:36862694-36862713 MS.gene068134:CDS 35.0%
TAGATGGGCAAGTATCAAAT+TGG - chr1.4:36863777-36863796 MS.gene068134:CDS 35.0%
TATTTCGACTACAACGATCT+TGG - chr1.4:36863220-36863239 MS.gene068134:CDS 35.0%
TCGAATGGAGATAAGTATGA+GGG - chr1.4:36861462-36861481 MS.gene068134:intron 35.0%
TCTAGTCCATACTTTCTCTT+TGG + chr1.4:36862360-36862379 None:intergenic 35.0%
TTCAAGAGTGGTTATATGGA+TGG - chr1.4:36861351-36861370 MS.gene068134:intron 35.0%
TTCAGATCTAAAGATGCTGA+GGG + chr1.4:36862320-36862339 None:intergenic 35.0%
TTCGAATGGAGATAAGTATG+AGG - chr1.4:36861461-36861480 MS.gene068134:intron 35.0%
TTTCAGATCTAAAGATGCTG+AGG + chr1.4:36862321-36862340 None:intergenic 35.0%
! AACTCAGTATACACTTGTTG+TGG + chr1.4:36861786-36861805 None:intergenic 35.0%
! ACTATTGCCCAGTAGTTTTT+AGG - chr1.4:36862441-36862460 MS.gene068134:CDS 35.0%
! AGTAATGGGAATAGGTATGA+TGG - chr1.4:36861600-36861619 MS.gene068134:CDS 35.0%
! ATGGACTATAGTCTACTAGT+TGG - chr1.4:36863438-36863457 MS.gene068134:CDS 35.0%
! CAAATCAAAGCGTCTATGTA+TGG + chr1.4:36863112-36863131 None:intergenic 35.0%
! GCTCTAGTGACAAAGTTTTA+TGG - chr1.4:36862865-36862884 MS.gene068134:intron 35.0%
! GGGAATGGAACTTTTAAATG+GGG - chr1.4:36861648-36861667 MS.gene068134:CDS 35.0%
! GGTTCATTTGTTTGGAGTAA+TGG - chr1.4:36861585-36861604 MS.gene068134:CDS 35.0%
! GTCATATTGAATGGACTTGT+AGG + chr1.4:36863962-36863981 None:intergenic 35.0%
! TTCTAGGAATTTAACGAGGA+TGG + chr1.4:36863578-36863597 None:intergenic 35.0%
! TTGTTTGGAGTAATGGGAAT+AGG - chr1.4:36861592-36861611 MS.gene068134:CDS 35.0%
!! AATTTTAGGTGATTCAGAGG+GGG - chr1.4:36863615-36863634 MS.gene068134:CDS 35.0%
!! ACATAGACGCTTTGATTTGA+AGG - chr1.4:36863113-36863132 MS.gene068134:CDS 35.0%
!! CATAGACGCTTTGATTTGAA+GGG - chr1.4:36863114-36863133 MS.gene068134:CDS 35.0%
!! TCTTTGGAATCAAAAGCTGA+AGG + chr1.4:36862344-36862363 None:intergenic 35.0%
!!! ATCAAGATCTTTTAGGATGG+TGG + chr1.4:36863190-36863209 None:intergenic 35.0%
!!! GGTGATGGAAGTTTTTATGT+AGG - chr1.4:36861669-36861688 MS.gene068134:intron 35.0%
!!! GTTCTGAGGGAATTTTTAAG+AGG + chr1.4:36862539-36862558 None:intergenic 35.0%
ACAGTAGTATGATGAAGGCA+TGG - chr1.4:36861022-36861041 MS.gene068134:CDS 40.0%
ACCAAAGAAATCAAAGAGGC+AGG - chr1.4:36862124-36862143 MS.gene068134:intron 40.0%
ACCTCATAGTACTCTCCAAT+TGG + chr1.4:36863874-36863893 None:intergenic 40.0%
ACGTTGTATGATAGCTAGCT+AGG + chr1.4:36863303-36863322 None:intergenic 40.0%
ACTGGTAATAGAACTCCAAC+TGG - chr1.4:36862017-36862036 MS.gene068134:intron 40.0%
AGGCGTATATTTGGATCCTT+CGG + chr1.4:36862390-36862409 None:intergenic 40.0%
AGTGAGTATCAAGTTAGTCC+TGG - chr1.4:36861807-36861826 MS.gene068134:intron 40.0%
ATAGCTTCCTAAGAGTTCTG+AGG + chr1.4:36862553-36862572 None:intergenic 40.0%
ATATTGGGGAATGGAGGAAT+GGG - chr1.4:36861547-36861566 MS.gene068134:intron 40.0%
ATGTCTTCTCGTGAAATACG+GGG + chr1.4:36863649-36863668 None:intergenic 40.0%
CATGTCTTCTCGTGAAATAC+GGG + chr1.4:36863650-36863669 None:intergenic 40.0%
CCAAAGAAATCAAAGAGGCA+GGG - chr1.4:36862125-36862144 MS.gene068134:intron 40.0%
CCATGTCTTCTCGTGAAATA+CGG + chr1.4:36863651-36863670 None:intergenic 40.0%
GAAAAACTATGGGAAAGGGA+AGG - chr1.4:36861292-36861311 MS.gene068134:intron 40.0%
GAACATATTATCCTTCTCCC+GGG - chr1.4:36861724-36861743 MS.gene068134:intron 40.0%
GAAGGAATAAGATCTCCTTC+TGG + chr1.4:36863486-36863505 None:intergenic 40.0%
GAAGGAGATCTTATTCCTTC+AGG - chr1.4:36863486-36863505 MS.gene068134:CDS 40.0%
GAGATAAGTATGAGGGAGAA+TGG - chr1.4:36861469-36861488 MS.gene068134:intron 40.0%
GATAGAATGCATTTATGGGG+CGG - chr1.4:36861966-36861985 MS.gene068134:CDS 40.0%
GATGGTAATAGAACTCCAAC+TGG - chr1.4:36861999-36862018 MS.gene068134:intron 40.0%
GATTGTGAATTGCAACTCGT+AGG - chr1.4:36863844-36863863 MS.gene068134:CDS 40.0%
GATTTGAAGGGTTCTTCACT+TGG - chr1.4:36863126-36863145 MS.gene068134:CDS 40.0%
GGAACATATTATCCTTCTCC+CGG - chr1.4:36861723-36861742 MS.gene068134:intron 40.0%
GGAATAGGTATGATGGCTAT+TGG - chr1.4:36861607-36861626 MS.gene068134:CDS 40.0%
GGAGTTCAAGAGTGGTTATA+TGG - chr1.4:36861347-36861366 MS.gene068134:intron 40.0%
GGGATACTTATAAGGGACAA+TGG - chr1.4:36861400-36861419 MS.gene068134:CDS 40.0%
GGGGTAAAGGTTCATTTGTT+TGG - chr1.4:36861577-36861596 MS.gene068134:CDS 40.0%
GGTGCTTTCAAAGTTTGTCT+TGG + chr1.4:36862107-36862126 None:intergenic 40.0%
GTGAGTATCAAGTTAGTCCT+GGG - chr1.4:36861808-36861827 MS.gene068134:intron 40.0%
GTGCATACACTGCTACTAAT+GGG - chr1.4:36861379-36861398 MS.gene068134:intron 40.0%
GTTGGAGTTCTATTACCAGT+TGG + chr1.4:36862017-36862036 None:intergenic 40.0%
GTTTCAGTAATCTCTGACTC+AGG + chr1.4:36863168-36863187 None:intergenic 40.0%
TATATTGGGGAATGGAGGAA+TGG - chr1.4:36861546-36861565 MS.gene068134:intron 40.0%
TATGATGGCTATTGGGAAGA+TGG - chr1.4:36861615-36861634 MS.gene068134:CDS 40.0%
TATGTCGGAGAATGGTTCAA+AGG - chr1.4:36861270-36861289 MS.gene068134:CDS 40.0%
TATGTTCCACTCTGATCTCT+TGG + chr1.4:36861711-36861730 None:intergenic 40.0%
TCAGATCTAAAGATGCTGAG+GGG + chr1.4:36862319-36862338 None:intergenic 40.0%
TCTTAGGAAGCTATTCAAGG+TGG - chr1.4:36862559-36862578 MS.gene068134:intron 40.0%
TGAGTATCAAGTTAGTCCTG+GGG - chr1.4:36861809-36861828 MS.gene068134:intron 40.0%
TGCATACACTGCTACTAATG+GGG - chr1.4:36861380-36861399 MS.gene068134:intron 40.0%
TGCTAATAATGTGTGTGCCT+TGG + chr1.4:36862755-36862774 None:intergenic 40.0%
TTCCATTTGAACTCACTGGA+CGG + chr1.4:36862419-36862438 None:intergenic 40.0%
TTGATCCAAGGCAATACTCA+AGG - chr1.4:36864001-36864020 MS.gene068134:CDS 40.0%
! AAGAAGTATACCATGCAGAG+AGG - chr1.4:36861157-36861176 MS.gene068134:CDS 40.0%
! AGAAGTATACCATGCAGAGA+GGG - chr1.4:36861158-36861177 MS.gene068134:CDS 40.0%
! CAGTAGTATGATGAAGGCAT+GGG - chr1.4:36861023-36861042 MS.gene068134:CDS 40.0%
! GGAACTTTTAAATGGGGTGA+TGG - chr1.4:36861654-36861673 MS.gene068134:CDS 40.0%
! TAGCTTCCTAAGAGTTCTGA+GGG + chr1.4:36862552-36862571 None:intergenic 40.0%
! TGAGTATTGCCTTGGATCAA+CGG + chr1.4:36864001-36864020 None:intergenic 40.0%
! TTTTCGAAAGACATGTGACC+TGG + chr1.4:36863695-36863714 None:intergenic 40.0%
!! AATGGAGGAATGGGAGTATT+TGG - chr1.4:36861556-36861575 MS.gene068134:CDS 40.0%
!! AATGGGAGTATTTGGGGTAA+AGG - chr1.4:36861564-36861583 MS.gene068134:CDS 40.0%
!! ACCAATTGGAGAGTACTATG+AGG - chr1.4:36863870-36863889 MS.gene068134:CDS 40.0%
!! AGGTACACCTTTTTCTGAGA+AGG + chr1.4:36862916-36862935 None:intergenic 40.0%
!! ATGGAGGAATGGGAGTATTT+GGG - chr1.4:36861557-36861576 MS.gene068134:CDS 40.0%
!!! AAGAAGCTTCCACTTTTTCC+AGG + chr1.4:36862644-36862663 None:intergenic 40.0%
AAAACTGAAACCTTCTCCCC+AGG + chr1.4:36861828-36861847 None:intergenic 45.0%
AACTTCTGCTAGATCCTTCC+AGG - chr1.4:36863674-36863693 MS.gene068134:CDS 45.0%
AAGGATCCAAGAGATCAGAG+TGG - chr1.4:36861702-36861721 MS.gene068134:intron 45.0%
ACTGCAAGTCTCTTCTGTGA+TGG + chr1.4:36861852-36861871 None:intergenic 45.0%
AGAAGAATGTCAGTGGATGC+AGG - chr1.4:36861912-36861931 MS.gene068134:CDS 45.0%
AGTATGAGGGAGAATGGAGA+AGG - chr1.4:36861475-36861494 MS.gene068134:intron 45.0%
AGTGGAGTATGAGATCCTGA+AGG + chr1.4:36863504-36863523 None:intergenic 45.0%
ATCCGTCCAGTGAGTTCAAA+TGG - chr1.4:36862414-36862433 MS.gene068134:CDS 45.0%
ATGATCACAGGCAAATCGAC+AGG - chr1.4:36863385-36863404 MS.gene068134:CDS 45.0%
ATGGACAAGGGAGATATGAG+TGG - chr1.4:36861508-36861527 MS.gene068134:intron 45.0%
CAACTCGTAGGAGAACCAAT+TGG - chr1.4:36863856-36863875 MS.gene068134:CDS 45.0%
CAGATCTAAAGATGCTGAGG+GGG + chr1.4:36862318-36862337 None:intergenic 45.0%
CCGTATTTCACGAGAAGACA+TGG - chr1.4:36863648-36863667 MS.gene068134:CDS 45.0%
CGAGGTTGGGTCATATTGAA+TGG + chr1.4:36863971-36863990 None:intergenic 45.0%
CTTCAGGACCAGCTTATGAA+GGG - chr1.4:36861325-36861344 MS.gene068134:intron 45.0%
CTTTCTTCGCCTGGAAAAAG+TGG - chr1.4:36862632-36862651 MS.gene068134:CDS 45.0%
GAAGAATGTCAGTGGATGCA+GGG - chr1.4:36861913-36861932 MS.gene068134:CDS 45.0%
GCAAGAGGGTCATCTTGATT+GGG - chr1.4:36861758-36861777 MS.gene068134:intron 45.0%
GCATCCACTGACATTCTTCT+CGG + chr1.4:36861912-36861931 None:intergenic 45.0%
GGATCTCATACTCCACTTGA+TGG - chr1.4:36863507-36863526 MS.gene068134:CDS 45.0%
GGCGTATATTTGGATCCTTC+GGG + chr1.4:36862389-36862408 None:intergenic 45.0%
GGTGAGACGAGTTATTCGAA+TGG - chr1.4:36861447-36861466 MS.gene068134:intron 45.0%
GGTGCATACACTGCTACTAA+TGG - chr1.4:36861378-36861397 MS.gene068134:intron 45.0%
GTATATTTGGATCCTTCGGG+AGG + chr1.4:36862386-36862405 None:intergenic 45.0%
GTATGAGGGAGAATGGAGAA+GGG - chr1.4:36861476-36861495 MS.gene068134:intron 45.0%
GTCCAGTGAGTTCAAATGGA+AGG - chr1.4:36862418-36862437 MS.gene068134:CDS 45.0%
GTCCTTCCATTTGAACTCAC+TGG + chr1.4:36862423-36862442 None:intergenic 45.0%
GTTGGAGTTCTACTACCAGT+TGG + chr1.4:36862035-36862054 None:intergenic 45.0%
TAAGCCGAGAAGAATGTCAG+TGG - chr1.4:36861905-36861924 MS.gene068134:CDS 45.0%
TATGAAGGGGAGTTCAAGAG+TGG - chr1.4:36861339-36861358 MS.gene068134:intron 45.0%
TATGAGGGAGAATGGAGAAG+GGG - chr1.4:36861477-36861496 MS.gene068134:intron 45.0%
TGATCACAGGCAAATCGACA+GGG - chr1.4:36863386-36863405 MS.gene068134:CDS 45.0%
TTCAGGACCAGCTTATGAAG+GGG - chr1.4:36861326-36861345 MS.gene068134:intron 45.0%
TTGAACTCCCCTTCATAAGC+TGG + chr1.4:36861336-36861355 None:intergenic 45.0%
! AAACGCCTTGAGTATTGCCT+TGG + chr1.4:36864009-36864028 None:intergenic 45.0%
! CCCTGCCTCTTTGATTTCTT+TGG + chr1.4:36862128-36862147 None:intergenic 45.0%
! GATGGTTTGCCTAAAGGGAA+TGG - chr1.4:36861633-36861652 MS.gene068134:CDS 45.0%
! GGGAAGATGGTTTGCCTAAA+GGG - chr1.4:36861628-36861647 MS.gene068134:CDS 45.0%
! TAGTATGATGAAGGCATGGG+AGG - chr1.4:36861026-36861045 MS.gene068134:CDS 45.0%
! TCTGGAACAGGAGGGAATTA+TGG - chr1.4:36863419-36863438 MS.gene068134:CDS 45.0%
! TGGGAAGATGGTTTGCCTAA+AGG - chr1.4:36861627-36861646 MS.gene068134:CDS 45.0%
!! ACGGGAAAGGGAAGTACTTA+TGG - chr1.4:36861232-36861251 MS.gene068134:CDS 45.0%
!! GGGAAGTACTTATGGACAGA+TGG - chr1.4:36861240-36861259 MS.gene068134:CDS 45.0%
!! TGGAGGAATGGGAGTATTTG+GGG - chr1.4:36861558-36861577 MS.gene068134:CDS 45.0%
!! ATTCATATTTATAAAATTTA+TGG - chr1.4:36863036-36863055 MS.gene068134:CDS 5.0%
!! CTTAATAATAAAAATTAATA+AGG + chr1.4:36862475-36862494 None:intergenic 5.0%
AAGTACTTCCCTTTCCCGTG+CGG + chr1.4:36861231-36861250 None:intergenic 50.0%
AATGTCAGTGGATGCAGGGA+GGG - chr1.4:36861917-36861936 MS.gene068134:CDS 50.0%
AGAAGAGACTTGCAGTGTGG+AGG - chr1.4:36861856-36861875 MS.gene068134:CDS 50.0%
AGAATGCATTTATGGGGCGG+CGG - chr1.4:36861969-36861988 MS.gene068134:CDS 50.0%
AGAATGGAGAAGGGGTTTGC+AGG - chr1.4:36861485-36861504 MS.gene068134:intron 50.0%
AGGCGAAGAAAGTTCACGCA+GGG + chr1.4:36862624-36862643 None:intergenic 50.0%
ATAACTTCCCGCACGGGAAA+GGG - chr1.4:36861220-36861239 MS.gene068134:CDS 50.0%
CAACGGCTGAAATCGAGGTT+GGG + chr1.4:36863984-36864003 None:intergenic 50.0%
CACAGAAGAGACTTGCAGTG+TGG - chr1.4:36861853-36861872 MS.gene068134:CDS 50.0%
CAGGGAGAGACCATATGCAA+AGG - chr1.4:36862143-36862162 MS.gene068134:intron 50.0%
CCTTCAGGACCAGCTTATGA+AGG - chr1.4:36861324-36861343 MS.gene068134:intron 50.0%
CCTTCATAAGCTGGTCCTGA+AGG + chr1.4:36861327-36861346 None:intergenic 50.0%
CGAAAGACATGTGACCTGGA+AGG + chr1.4:36863691-36863710 None:intergenic 50.0%
CGATTTCAGCCGTTGATCCA+AGG - chr1.4:36863989-36864008 MS.gene068134:CDS 50.0%
CGCAAGAGGGTCATCTTGAT+TGG - chr1.4:36861757-36861776 MS.gene068134:intron 50.0%
GCAGAGAGGGTTCTACCTAA+TGG - chr1.4:36861171-36861190 MS.gene068134:CDS 50.0%
TAGGTAGAACCCTCTCTGCA+TGG + chr1.4:36861170-36861189 None:intergenic 50.0%
TCAACGGCTGAAATCGAGGT+TGG + chr1.4:36863985-36864004 None:intergenic 50.0%
TCAAGTTAGTCCTGGGGAGA+AGG - chr1.4:36861815-36861834 MS.gene068134:intron 50.0%
TGGATCAACGGCTGAAATCG+AGG + chr1.4:36863989-36864008 None:intergenic 50.0%
TGGGAAAGGGAAGGTTCACT+TGG - chr1.4:36861301-36861320 MS.gene068134:intron 50.0%
TGGGAGTGAATATGCCAGCA+CGG - chr1.4:36863797-36863816 MS.gene068134:CDS 50.0%
TTAGGTGATTCAGAGGGGGA+AGG - chr1.4:36863619-36863638 MS.gene068134:CDS 50.0%
TTGAACTCACTGGACGGATG+TGG + chr1.4:36862413-36862432 None:intergenic 50.0%
! ATATGCCAGCACGGGTTGAA+AGG - chr1.4:36863806-36863825 MS.gene068134:CDS 50.0%
! CGGATGTGGAGGCGTATATT+TGG + chr1.4:36862399-36862418 None:intergenic 50.0%
! TGGACTAGATTTCCTCCCGA+AGG - chr1.4:36862371-36862390 MS.gene068134:CDS 50.0%
!! TGGGTTGATAACTTCCCGCA+CGG - chr1.4:36861213-36861232 MS.gene068134:CDS 50.0%
!! TGTGAGCTTCTGGAACAGGA+GGG - chr1.4:36863411-36863430 MS.gene068134:CDS 50.0%
AACTCACTGGACGGATGTGG+AGG + chr1.4:36862410-36862429 None:intergenic 55.0%
AATGCATTTATGGGGCGGCG+GGG - chr1.4:36861971-36861990 MS.gene068134:CDS 55.0%
ACTGTCCTTTCAACCCGTGC+TGG + chr1.4:36863814-36863833 None:intergenic 55.0%
AGGGGTTTGCAGGATGGACA+AGG - chr1.4:36861495-36861514 MS.gene068134:intron 55.0%
AGTACTTCCCTTTCCCGTGC+GGG + chr1.4:36861230-36861249 None:intergenic 55.0%
AGTGTGGAGGTCTACCAAGG+GGG - chr1.4:36861869-36861888 MS.gene068134:CDS 55.0%
ATGCAGGGAGGGCAAGTGTA+GGG - chr1.4:36861928-36861947 MS.gene068134:CDS 55.0%
CAGGCGAAGAAAGTTCACGC+AGG + chr1.4:36862625-36862644 None:intergenic 55.0%
CAGTGTGGAGGTCTACCAAG+GGG - chr1.4:36861868-36861887 MS.gene068134:CDS 55.0%
CTCTTGCGATTGCGATGACC+CGG + chr1.4:36861745-36861764 None:intergenic 55.0%
CTGCGTGAACTTTCTTCGCC+TGG - chr1.4:36862623-36862642 MS.gene068134:CDS 55.0%
GAATGCATTTATGGGGCGGC+GGG - chr1.4:36861970-36861989 MS.gene068134:CDS 55.0%
GAATGTCAGTGGATGCAGGG+AGG - chr1.4:36861916-36861935 MS.gene068134:CDS 55.0%
GATAACTTCCCGCACGGGAA+AGG - chr1.4:36861219-36861238 MS.gene068134:CDS 55.0%
GCAGTGTGGAGGTCTACCAA+GGG - chr1.4:36861867-36861886 MS.gene068134:CDS 55.0%
GGGAGTGAATATGCCAGCAC+GGG - chr1.4:36863798-36863817 MS.gene068134:CDS 55.0%
GGGGTTTGCAGGATGGACAA+GGG - chr1.4:36861496-36861515 MS.gene068134:intron 55.0%
GGGTCATCGCAATCGCAAGA+GGG - chr1.4:36861744-36861763 MS.gene068134:intron 55.0%
TCTAAAGATGCTGAGGGGGC+AGG + chr1.4:36862314-36862333 None:intergenic 55.0%
TCTTGCGATTGCGATGACCC+GGG + chr1.4:36861744-36861763 None:intergenic 55.0%
TGCAGTGTGGAGGTCTACCA+AGG - chr1.4:36861866-36861885 MS.gene068134:CDS 55.0%
TGCCTGTGTCTTCTTCACCG+TGG + chr1.4:36861052-36861071 None:intergenic 55.0%
TGGAGAAGGGGTTTGCAGGA+TGG - chr1.4:36861489-36861508 MS.gene068134:intron 55.0%
! GGAAGGTTCACTTGGCCTTC+AGG - chr1.4:36861309-36861328 MS.gene068134:intron 55.0%
!! CTGTGAGCTTCTGGAACAGG+AGG - chr1.4:36863410-36863429 MS.gene068134:CDS 55.0%
!! GGACTGTGAGCTTCTGGAAC+AGG - chr1.4:36863407-36863426 MS.gene068134:CDS 55.0%
!! GGGTTGATAACTTCCCGCAC+GGG - chr1.4:36861214-36861233 MS.gene068134:CDS 55.0%
AGCACTACCACCATCCCCCT+TGG + chr1.4:36861886-36861905 None:intergenic 60.0%
AGGTCTACCAAGGGGGATGG+TGG - chr1.4:36861876-36861895 MS.gene068134:CDS 60.0%
CGACAGGGACTGTGAGCTTC+TGG - chr1.4:36863401-36863420 MS.gene068134:CDS 60.0%
CGGGTCATCGCAATCGCAAG+AGG - chr1.4:36861743-36861762 MS.gene068134:intron 60.0%
GATGCAGGGAGGGCAAGTGT+AGG - chr1.4:36861927-36861946 MS.gene068134:CDS 60.0%
GATTGCGATGACCCGGGAGA+AGG + chr1.4:36861738-36861757 None:intergenic 60.0%
GGCCACGGTGAAGAAGACAC+AGG - chr1.4:36861047-36861066 MS.gene068134:CDS 60.0%
TGGAGGTCTACCAAGGGGGA+TGG - chr1.4:36861873-36861892 MS.gene068134:CDS 60.0%
! GATGAAGGCATGGGAGGCCA+CGG - chr1.4:36861032-36861051 MS.gene068134:CDS 60.0%
CATTTATGGGGCGGCGGGGA+AGG - chr1.4:36861975-36861994 MS.gene068134:CDS 65.0%
TGGGGCGGCGGGGAAGGTGA+TGG - chr1.4:36861981-36862000 MS.gene068134:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 36861009 36864068 36861009 ID=MS.gene068134
chr1.4 mRNA 36861009 36864068 36861009 ID=MS.gene068134.t1;Parent=MS.gene068134
chr1.4 exon 36862867 36864068 36862867 ID=MS.gene068134.t1.exon1;Parent=MS.gene068134.t1
chr1.4 CDS 36862867 36864068 36862867 ID=cds.MS.gene068134.t1;Parent=MS.gene068134.t1
chr1.4 exon 36862615 36862782 36862615 ID=MS.gene068134.t1.exon2;Parent=MS.gene068134.t1
chr1.4 CDS 36862615 36862782 36862615 ID=cds.MS.gene068134.t1;Parent=MS.gene068134.t1
chr1.4 exon 36862356 36862521 36862356 ID=MS.gene068134.t1.exon3;Parent=MS.gene068134.t1
chr1.4 CDS 36862356 36862521 36862356 ID=cds.MS.gene068134.t1;Parent=MS.gene068134.t1
chr1.4 exon 36862150 36862266 36862150 ID=MS.gene068134.t1.exon4;Parent=MS.gene068134.t1
chr1.4 CDS 36862150 36862266 36862150 ID=cds.MS.gene068134.t1;Parent=MS.gene068134.t1
chr1.4 exon 36861818 36862011 36861818 ID=MS.gene068134.t1.exon5;Parent=MS.gene068134.t1
chr1.4 CDS 36861818 36862011 36861818 ID=cds.MS.gene068134.t1;Parent=MS.gene068134.t1
chr1.4 exon 36861549 36861682 36861549 ID=MS.gene068134.t1.exon6;Parent=MS.gene068134.t1
chr1.4 CDS 36861549 36861682 36861549 ID=cds.MS.gene068134.t1;Parent=MS.gene068134.t1
chr1.4 exon 36861382 36861454 36861382 ID=MS.gene068134.t1.exon7;Parent=MS.gene068134.t1
chr1.4 CDS 36861382 36861454 36861382 ID=cds.MS.gene068134.t1;Parent=MS.gene068134.t1
chr1.4 exon 36861009 36861297 36861009 ID=MS.gene068134.t1.exon8;Parent=MS.gene068134.t1
chr1.4 CDS 36861009 36861297 36861009 ID=cds.MS.gene068134.t1;Parent=MS.gene068134.t1
Gene Sequence

>MS.gene068134

ATGATGGGTAAAGACAGTAGTATGATGAAGGCATGGGAGGCCACGGTGAAGAAGACACAGGCAGTTGCGAAGAAGCGTGCAAATAGCATATTTGGATCAACATATGTAGCTTCACAACATGGAGATCATGAAGAAGAAAGCAAGGATGAAGAAGTATACCATGCAGAGAGGGTTCTACCTAATGGAGATTACTATAAAGGAGAATGGGTTGATAACTTCCCGCACGGGAAAGGGAAGTACTTATGGACAGATGGATGTATATATGTCGGAGAATGGTTCAAAGGAAAAACTATGGGAAAGGGAAGGTTCACTTGGCCTTCAGGACCAGCTTATGAAGGGGAGTTCAAGAGTGGTTATATGGATGGAATAGGTGCATACACTGCTACTAATGGGGATACTTATAAGGGACAATGGGTAATGAATTTGAAACATGGTCATGGTGAGACGAGTTATTCGAATGGAGATAAGTATGAGGGAGAATGGAGAAGGGGTTTGCAGGATGGACAAGGGAGATATGAGTGGAAAGATGAGAACTATTATATTGGGGAATGGAGGAATGGGAGTATTTGGGGTAAAGGTTCATTTGTTTGGAGTAATGGGAATAGGTATGATGGCTATTGGGAAGATGGTTTGCCTAAAGGGAATGGAACTTTTAAATGGGGTGATGGAAGTTTTTATGTAGGTAATTGGAGTAAGGATCCAAGAGATCAGAGTGGAACATATTATCCTTCTCCCGGGTCATCGCAATCGCAAGAGGGTCATCTTGATTGGGAACCACAACAAGTGTATACTGAGTTGAGTGAGTATCAAGTTAGTCCTGGGGAGAAGGTTTCAGTTTTGCCATCACAGAAGAGACTTGCAGTGTGGAGGTCTACCAAGGGGGATGGTGGTAGTGCTAAGCCGAGAAGAATGTCAGTGGATGCAGGGAGGGCAAGTGTAGGGCTTGAAAAACCAAGTGATAGAATGCATTTATGGGGCGGCGGGGAAGGTGATGGTAATAGAACTCCAACTGGTAATAGAACTCCAACTGGTAGTAGAACTCCAACTAAAGATGATCATGAGTTGCTTGGTTTACATTTACATGCTTCTAATAATCCAAGACAAACTTTGAAAGCACCAAAGAAATCAAAGAGGCAGGGAGAGACCATATGCAAAGGACACAAGAATTATGAGCTCATGCTCAATTTACAATTGGGAATCAGGTAACGTAATTTTTTTTAAGAAACAAAAACAAACAATGTAGCGTTTTTATTCATGATAATTGTTTGAGTTGTTGCATATAATAGGCATTCTGTTGGAAGACCTGCCCCCTCAGCATCTTTAGATCTGAAACCTTCAGCTTTTGATTCCAAAGAGAAAGTATGGACTAGATTTCCTCCCGAAGGATCCAAATATACGCCTCCACATCCGTCCAGTGAGTTCAAATGGAAGGACTATTGCCCAGTAGTTTTTAGGTAGTTAATCCTTATTAATTTTTATTATTAAGTTCCCTTTTGCATATTATAATTGATCAACATATAAATTTTACCTCTTAAAAATTCCCTCAGAACTCTTAGGAAGCTATTCAAGGTGGATGCAGCTGATTACATGTTATCTATATGTGGAAATGATGCCCTGCGTGAACTTTCTTCGCCTGGAAAAAGTGGAAGCTTCTTTTACTTGACCAATGATGACCGTTATATGATTAAGACAATGAAGAAAGCTGAGGCTAAAGTGAGTTTCATACTAATTTTCTTATCGAAACCAAGGCACACACATTATTAGCATAATATTGATTTGGACATGCTGATTTTATTTTGCAGGCTCTCTTGAGAATGCTTCCCGCTTATTACAATCATTTTCGAGCATTTGAAAATGCTCTAGTGACAAAGTTTTATGGTTTACATTGTGTCAAGTTAAATGGACCTTCTCAGAAAAAGGTGTACCTAAATGTTGTAGACGATTTTTATTGTTTAAAAAAATTTAAGCATTTACTAGTATCTATCCTTATAGGAAAGCATACATTTCTAGTAAGAGAGAACTAAGAAATTCATATTTATAAAATTTATGGATTTCAGGTACGATTTATCATAATGGGCAACCTTTTTTGTTCTGAGTATACCATACATAGACGCTTTGATTTGAAGGGTTCTTCACTTGGGCGCATAACGACTAAGCCTGAGTCAGAGATTACTGAAACCACCATCCTAAAAGATCTTGATCTAAATTTTATATTTCGACTACAACGATCTTGGTTTTTAGAATTTTGCAGGTGATAAAAGTTAAATATATTATAGCAAATTTTAATGTGACCTAGCTAGCTATCATACAACGTATTTCTATTTTTACCTTCTTGAAAAGAATAAGAAATTGAACCATATCATGTGTTTGTTATATATGATCACAGGCAAATCGACAGGGACTGTGAGCTTCTGGAACAGGAGGGAATTATGGACTATAGTCTACTAGTTGGCATTCATTTCAAAGATATATCACCAGAAGGAGATCTTATTCCTTCAGGATCTCATACTCCACTTGATGGTATTTTTCTTATCCGTAATAGTATATATCTTGTCTTAATTTTTGTCCATCCTCGTTAAATTCCTAGAAAAATAATTTGGATGTTAAATTTTAGGTGATTCAGAGGGGGAAGGAACGCCCCGTATTTCACGAGAAGACATGGATCAACTTCTGCTAGATCCTTCCAGGTCACATGTCTTTCGAAAATTTTAATATAGAATCAATGTTTATGAGATAAATTCTTAAAACAATTATTGTATATTTGTTTGTAGATGGGCAAGTATCAAATTGGGAGTGAATATGCCAGCACGGGTTGAAAGGACAGTGAGAACAAGTGATTGTGAATTGCAACTCGTAGGAGAACCAATTGGAGAGTACTATGAGGTTGTCTTGTTTTTCGGTATCATTGACATACTTCAAGACTATGATATCAGTAAGAAGCTTGAGCATGCCTACAAGTCCATTCAATATGACCCAACCTCGATTTCAGCCGTTGATCCAAGGCAATACTCAAGGCGTTTTCGTGACTTCATATTCAAAATATTTTCACAAGATTCTTGA
Protein sequence

>MS.gene068134.t1

MMGKDSSMMKAWEATVKKTQAVAKKRANSIFGSTYVASQHGDHEEESKDEEVYHAERVLPNGDYYKGEWVDNFPHGKGKYLWTDGCIYVGEWFKGKTMGKGRFTWPSGPAYEGEFKSGYMDGIGAYTATNGDTYKGQWVMNLKHGHGETSYSNGDKYEGEWRRGLQDGQGRYEWKDENYYIGEWRNGSIWGKGSFVWSNGNRYDGYWEDGLPKGNGTFKWGDGSFYVGNWSKDPRDQSGTYYPSPGSSQSQEGHLDWEPQQVYTELSEYQVSPGEKVSVLPSQKRLAVWRSTKGDGGSAKPRRMSVDAGRASVGLEKPSDRMHLWGGGEGDGNRTPTGNRTPTGSRTPTKDDHELLGLHLHASNNPRQTLKAPKKSKRQGETICKGHKNYELMLNLQLGIRHSVGRPAPSASLDLKPSAFDSKEKVWTRFPPEGSKYTPPHPSSEFKWKDYCPVVFRTLRKLFKVDAADYMLSICGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEAKALLRMLPAYYNHFRAFENALVTKFYGLHCVKLNGPSQKKVRFIIMGNLFCSEYTIHRRFDLKGSSLGRITTKPESEITETTILKDLDLNFIFRLQRSWFLEFCRQIDRDCELLEQEGIMDYSLLVGIHFKDISPEGDLIPSGSHTPLDGDSEGEGTPRISREDMDQLLLDPSRWASIKLGVNMPARVERTVRTSDCELQLVGEPIGEYYEVVLFFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPRQYSRRFRDFIFKIFSQDS