AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068227

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068227.t1 MTR_1g048940 94.915 354 18 0 1 354 1 354 0.0 706
MS.gene068227.t1 MTR_7g081710 49.003 351 173 4 2 349 3 350 2.83e-121 353
MS.gene068227.t1 MTR_1g062110 41.108 343 183 7 18 346 32 369 7.44e-87 267
MS.gene068227.t1 MTR_7g102820 39.031 351 187 8 18 346 31 376 2.55e-83 258
MS.gene068227.t1 MTR_8g024120 35.329 334 207 5 20 349 14 342 1.65e-72 229
MS.gene068227.t1 MTR_3g092890 36.527 334 200 5 22 351 13 338 8.17e-72 227
MS.gene068227.t1 MTR_1g062110 40.502 279 148 6 18 282 32 306 1.36e-64 207
MS.gene068227.t1 MTR_1g070135 35.161 310 192 7 24 329 15 319 1.41e-62 203
MS.gene068227.t1 MTR_1g070120 34.395 314 197 7 20 329 11 319 7.93e-62 201
MS.gene068227.t1 MTR_1g070085 34.177 316 198 7 20 330 10 320 2.11e-61 200
MS.gene068227.t1 MTR_1g070085 34.177 316 198 7 20 330 10 320 2.11e-61 200
MS.gene068227.t1 MTR_5g065010 35.000 300 184 6 45 339 39 332 6.90e-61 199
MS.gene068227.t1 MTR_5g032870 36.728 324 194 8 16 331 7 327 4.76e-59 194
MS.gene068227.t1 MTR_1g070080 32.508 323 207 7 20 336 10 327 7.57e-59 194
MS.gene068227.t1 MTR_4g093840 36.013 311 186 9 45 349 62 365 2.57e-58 193
MS.gene068227.t1 MTR_5g032880 36.111 324 196 7 16 331 345 665 5.46e-57 196
MS.gene068227.t1 MTR_5g032880 34.985 323 193 8 16 331 7 319 9.36e-54 188
MS.gene068227.t1 MTR_3g091350 34.314 306 191 6 43 344 57 356 2.77e-55 185
MS.gene068227.t1 MTR_3g091360 33.866 313 197 6 39 347 46 352 2.40e-54 182
MS.gene068227.t1 MTR_6g015950 34.076 314 193 6 22 329 14 319 1.26e-52 177
MS.gene068227.t1 MTR_0009s0050 31.977 344 218 9 18 354 18 352 1.32e-52 178
MS.gene068227.t1 MTR_0009s0050 31.977 344 218 9 18 354 18 352 1.38e-52 177
MS.gene068227.t1 MTR_1g070135 37.548 261 146 8 24 272 15 270 1.04e-50 171
MS.gene068227.t1 MTR_3g063180 32.849 344 210 11 18 348 15 350 5.57e-50 171
MS.gene068227.t1 MTR_2g072910 32.277 347 208 11 16 349 21 353 1.49e-49 170
MS.gene068227.t1 MTR_7g062570 34.897 341 195 12 22 349 29 355 1.97e-49 169
MS.gene068227.t1 MTR_5g059130 31.307 329 207 7 12 330 8 327 2.05e-49 169
MS.gene068227.t1 MTR_7g016080 31.250 336 205 6 3 333 2 316 7.05e-49 167
MS.gene068227.t1 MTR_7g016090 29.819 332 217 5 3 331 4 322 7.43e-49 167
MS.gene068227.t1 MTR_7g016090 29.819 332 217 5 3 331 2 320 7.61e-49 167
MS.gene068227.t1 MTR_1g033810 31.445 353 206 10 19 352 18 353 8.12e-49 168
MS.gene068227.t1 MTR_1g034120 32.219 329 198 7 24 330 4 329 6.47e-48 165
MS.gene068227.t1 MTR_5g048740 29.825 342 225 9 18 352 16 349 6.77e-48 165
MS.gene068227.t1 MTR_2g072890 30.435 345 218 9 16 349 21 354 1.38e-47 165
MS.gene068227.t1 MTR_1g034060 31.915 329 199 7 24 330 4 329 1.69e-47 164
MS.gene068227.t1 MTR_5g048850 30.383 339 226 7 18 352 18 350 4.35e-47 163
MS.gene068227.t1 MTR_0009s0480 30.495 364 205 9 12 352 11 349 8.18e-47 162
MS.gene068227.t1 MTR_8g064200 30.259 347 217 10 18 352 28 361 1.18e-46 162
MS.gene068227.t1 MTR_7g068650 32.831 332 202 9 18 333 20 346 1.20e-46 162
MS.gene068227.t1 MTR_8g064200 30.259 347 217 10 18 352 23 356 1.22e-46 162
MS.gene068227.t1 MTR_3g058610 30.345 290 195 5 12 297 6 292 1.54e-46 162
MS.gene068227.t1 MTR_4g015790 32.070 343 203 10 18 335 19 356 2.13e-46 162
MS.gene068227.t1 MTR_5g055680 28.142 366 230 8 4 354 5 352 5.77e-46 160
MS.gene068227.t1 MTR_5g048550 30.321 343 221 10 18 352 18 350 1.50e-45 159
MS.gene068227.t1 MTR_0328s0030 30.357 336 218 7 18 346 16 342 2.08e-45 159
MS.gene068227.t1 MTR_5g048570 27.941 340 235 6 18 354 18 350 3.13e-45 158
MS.gene068227.t1 MTR_1g070085 33.878 245 156 4 89 330 1 242 4.78e-45 155
MS.gene068227.t1 MTR_5g055900 28.182 330 231 4 22 349 22 347 1.01e-44 157
MS.gene068227.t1 MTR_3g026150 30.794 315 195 11 44 349 59 359 2.32e-44 156
MS.gene068227.t1 MTR_5g055820 30.000 340 221 10 18 349 18 348 2.72e-44 156
MS.gene068227.t1 MTR_2g437380 30.925 346 201 9 24 349 28 355 3.12e-44 156
MS.gene068227.t1 MTR_7g062580 33.882 304 181 9 34 330 47 337 6.38e-44 155
MS.gene068227.t1 MTR_4g087090 31.646 316 202 6 27 329 11 325 6.45e-44 155
MS.gene068227.t1 MTR_7g062550 34.056 323 192 9 34 349 52 360 7.87e-44 155
MS.gene068227.t1 MTR_5g048470 29.738 343 213 10 18 346 23 351 9.54e-44 154
MS.gene068227.t1 MTR_5g055800 29.714 350 225 9 12 352 12 349 9.72e-44 154
MS.gene068227.t1 MTR_5g055690 30.794 315 202 7 43 349 42 348 1.86e-43 154
MS.gene068227.t1 MTR_8g075890 30.769 286 190 5 16 297 11 292 1.96e-43 154
MS.gene068227.t1 MTR_5g022020 31.765 255 171 3 45 297 39 292 2.01e-43 154
MS.gene068227.t1 MTR_3g072820 29.193 322 219 6 13 329 7 324 2.27e-43 153
MS.gene068227.t1 MTR_3g072810 31.646 316 201 9 21 329 14 321 2.61e-43 153
MS.gene068227.t1 MTR_1g093110 29.755 326 203 7 21 330 40 355 2.68e-43 154
MS.gene068227.t1 MTR_1g070100 33.610 241 154 4 93 330 1 238 3.40e-43 150
MS.gene068227.t1 MTR_1g034140 31.613 310 193 6 27 322 7 311 4.85e-43 152
MS.gene068227.t1 MTR_7g063730 30.874 366 221 11 1 349 14 364 9.89e-43 152
MS.gene068227.t1 MTR_8g074050 29.808 312 202 9 45 349 52 353 3.72e-42 150
MS.gene068227.t1 MTR_7g062600 31.889 323 200 12 34 349 43 352 3.75e-42 150
MS.gene068227.t1 MTR_0009s0050 35.268 224 134 5 134 354 39 254 6.67e-42 147
MS.gene068227.t1 MTR_0009s0050 35.268 224 134 5 134 354 39 254 8.03e-42 147
MS.gene068227.t1 MTR_2g068840 30.435 345 222 11 18 352 27 363 1.64e-41 149
MS.gene068227.t1 MTR_8g075830 30.769 286 190 5 16 297 11 292 1.64e-41 149
MS.gene068227.t1 MTR_8g074070 31.930 285 180 8 45 322 52 329 1.83e-41 148
MS.gene068227.t1 MTR_8g009080 29.618 314 203 6 48 353 97 400 1.93e-41 149
MS.gene068227.t1 MTR_5g059140 30.625 320 191 9 19 318 7 315 5.04e-41 147
MS.gene068227.t1 MTR_8g009160 32.432 296 186 9 45 333 60 348 1.09e-40 147
MS.gene068227.t1 MTR_1g043760 31.250 352 207 12 1 331 1 338 1.82e-40 146
MS.gene068227.t1 MTR_1g093120 28.228 333 212 7 30 344 42 365 3.64e-40 145
MS.gene068227.t1 MTR_8g009170 30.847 295 191 9 45 332 60 348 3.79e-40 145
MS.gene068227.t1 MTR_8g028435 30.915 317 199 12 30 333 39 348 5.76e-40 145
MS.gene068227.t1 MTR_1g093140 27.761 335 220 6 23 344 48 373 7.82e-40 145
MS.gene068227.t1 MTR_3g070860 29.825 342 217 13 24 351 26 358 9.90e-40 144
MS.gene068227.t1 MTR_5g082750 30.178 338 219 10 24 350 25 356 1.06e-39 144
MS.gene068227.t1 MTR_2g069010 29.276 304 202 4 44 339 68 366 1.13e-39 144
MS.gene068227.t1 MTR_2g069020 30.693 303 196 6 44 339 66 361 1.51e-39 144
MS.gene068227.t1 MTR_8g009090 31.546 317 197 12 30 333 39 348 1.95e-39 143
MS.gene068227.t1 MTR_8g009110 31.230 317 199 11 30 333 39 349 2.30e-39 143
MS.gene068227.t1 MTR_7g029655 30.769 325 207 7 18 330 33 351 2.46e-39 143
MS.gene068227.t1 MTR_2g069020 30.693 303 196 6 44 339 66 361 2.54e-39 144
MS.gene068227.t1 MTR_2g069210 31.081 296 187 8 45 332 64 350 2.55e-39 143
MS.gene068227.t1 MTR_4g087140 28.399 331 213 7 21 330 1 328 5.99e-39 142
MS.gene068227.t1 MTR_2g069090 29.261 352 217 13 3 333 16 356 7.11e-39 142
MS.gene068227.t1 MTR_3g117420 29.655 290 180 8 45 322 52 329 8.54e-39 141
MS.gene068227.t1 MTR_0056s0160 34.685 222 134 5 134 352 22 235 1.44e-38 137
MS.gene068227.t1 MTR_2g102570 29.530 298 192 5 49 330 39 334 1.65e-38 141
MS.gene068227.t1 MTR_8g062600 27.327 333 222 8 18 338 38 362 1.86e-38 141
MS.gene068227.t1 MTR_7g062560 29.526 359 222 13 5 353 19 356 2.32e-38 140
MS.gene068227.t1 MTR_8g041620 30.702 342 215 11 18 346 38 370 3.07e-38 140
MS.gene068227.t1 MTR_3g088565 31.229 301 186 9 44 334 2 291 3.66e-38 139
MS.gene068227.t1 MTR_2g069300 29.373 303 196 9 45 338 54 347 3.81e-38 140
MS.gene068227.t1 MTR_7g045650 32.051 312 191 10 1 300 10 312 1.04e-37 138
MS.gene068227.t1 MTR_6g464620 28.446 341 225 7 5 332 24 358 1.22e-37 139
MS.gene068227.t1 MTR_5g011250 26.625 323 218 9 20 326 15 334 1.25e-37 138
MS.gene068227.t1 MTR_1g102070 29.254 335 214 11 13 332 27 353 1.29e-37 139
MS.gene068227.t1 MTR_1g081840 29.375 320 212 7 23 332 32 347 1.36e-37 139
MS.gene068227.t1 MTR_8g041600 30.514 331 199 11 18 330 38 355 1.52e-37 139
MS.gene068227.t1 MTR_4g116010 31.852 270 163 8 64 322 64 323 2.33e-37 137
MS.gene068227.t1 MTR_4g087110 29.721 323 204 7 28 330 8 327 3.72e-37 137
MS.gene068227.t1 MTR_2g069190 28.415 366 232 13 3 349 16 370 5.64e-37 137
MS.gene068227.t1 MTR_4g087120 29.721 323 204 7 28 330 8 327 7.37e-37 136
MS.gene068227.t1 MTR_3g096500 27.893 337 225 9 23 345 44 376 9.71e-37 137
MS.gene068227.t1 MTR_8g033380 28.037 321 219 5 21 332 30 347 1.16e-36 136
MS.gene068227.t1 MTR_2g068950 28.956 297 198 4 44 332 62 353 1.21e-36 136
MS.gene068227.t1 MTR_8g074070 31.690 284 163 9 45 322 52 310 1.82e-36 135
MS.gene068227.t1 MTR_3g045230 27.564 312 217 4 39 349 50 353 1.93e-36 135
MS.gene068227.t1 MTR_8g006930 28.779 344 224 9 18 349 38 372 2.51e-36 135
MS.gene068227.t1 MTR_3g088745 30.606 330 197 12 22 332 14 330 2.55e-36 135
MS.gene068227.t1 MTR_1g043810 31.454 337 209 12 18 343 25 350 2.68e-36 135
MS.gene068227.t1 MTR_3g026150 31.034 261 160 9 98 349 7 256 6.10e-36 131
MS.gene068227.t1 MTR_8g008930 31.498 327 185 16 30 333 39 349 6.31e-36 134
MS.gene068227.t1 MTR_2g068960 29.195 298 196 6 44 332 62 353 1.95e-35 133
MS.gene068227.t1 MTR_3g117485 29.010 293 181 8 45 322 49 329 2.13e-35 132
MS.gene068227.t1 MTR_4g119410 30.068 296 191 7 44 330 66 354 2.86e-35 132
MS.gene068227.t1 MTR_4g117880 30.479 292 190 9 45 329 60 345 2.87e-35 132
MS.gene068227.t1 MTR_3g043900 26.901 342 228 7 18 349 23 352 3.56e-35 132
MS.gene068227.t1 MTR_4g024660 27.077 325 217 9 18 330 38 354 3.77e-35 132
MS.gene068227.t1 MTR_8g093930 26.498 317 226 4 22 332 24 339 9.13e-35 131
MS.gene068227.t1 MTR_2g437380 36.139 202 123 3 151 349 63 261 1.01e-34 128
MS.gene068227.t1 MTR_1g043775 31.935 310 191 11 43 343 52 350 1.31e-34 130
MS.gene068227.t1 MTR_0009s0050 36.571 175 106 3 182 354 1 172 1.36e-34 125
MS.gene068227.t1 MTR_1g032140 27.941 340 227 10 18 349 35 364 1.95e-34 130
MS.gene068227.t1 MTR_7g105070 27.479 353 221 12 18 352 29 364 2.55e-34 129
MS.gene068227.t1 MTR_0032s0040 28.869 336 206 9 18 332 33 356 3.35e-34 129
MS.gene068227.t1 MTR_1g070110 32.653 245 129 7 89 330 4 215 6.27e-34 125
MS.gene068227.t1 MTR_7g056347 26.608 342 225 11 18 344 38 368 8.05e-34 128
MS.gene068227.t1 MTR_7g078010 29.605 304 192 7 44 335 66 359 9.38e-34 128
MS.gene068227.t1 MTR_1g043770 27.419 372 223 13 1 344 1 353 4.76e-33 126
MS.gene068227.t1 MTR_8g469400 30.996 271 171 8 69 330 78 341 6.21e-33 126
MS.gene068227.t1 MTR_2g025120 28.767 292 187 9 47 330 6 284 8.09e-33 124
MS.gene068227.t1 MTR_4g087100 27.864 323 210 8 28 330 8 327 9.85e-33 125
MS.gene068227.t1 MTR_1g027290 31.457 302 181 11 53 339 38 328 1.96e-32 124
MS.gene068227.t1 MTR_2g069060 28.522 291 197 5 43 329 47 330 2.22e-32 124
MS.gene068227.t1 MTR_8g009120 30.068 296 184 9 45 334 60 338 4.12e-32 123
MS.gene068227.t1 MTR_3g083370 27.575 301 201 8 60 354 17 306 6.44e-32 122
MS.gene068227.t1 MTR_1g070185 26.946 334 227 8 18 344 39 362 1.60e-31 122
MS.gene068227.t1 MTR_3g026150 30.420 286 159 14 7 270 15 282 7.85e-31 118
MS.gene068227.t1 MTR_8g041600 31.321 265 159 9 18 270 38 291 8.37e-31 119
MS.gene068227.t1 MTR_8g009150 27.365 296 184 7 45 334 60 330 9.11e-31 119
MS.gene068227.t1 MTR_5g048850 30.502 259 171 6 18 272 18 271 9.13e-31 118
MS.gene068227.t1 MTR_2g072910 33.210 271 155 10 16 273 21 278 1.45e-30 117
MS.gene068227.t1 MTR_3g117485 28.846 260 159 7 77 322 10 257 1.79e-30 117
MS.gene068227.t1 MTR_4g087130 28.834 326 214 6 21 329 1 325 3.03e-30 119
MS.gene068227.t1 MTR_1g032220 26.254 339 234 8 18 349 42 371 7.35e-30 117
MS.gene068227.t1 MTR_7g102720 28.621 290 201 6 62 349 49 334 8.05e-30 117
MS.gene068227.t1 MTR_0009s0400 40.940 149 83 3 206 352 1 146 1.16e-29 111
MS.gene068227.t1 MTR_2g083000 29.739 306 196 9 45 347 33 322 1.27e-29 116
MS.gene068227.t1 MTR_8g063070 27.609 297 197 8 44 330 66 354 1.28e-29 117
MS.gene068227.t1 MTR_5g055690 32.627 236 144 6 43 270 42 270 1.98e-29 114
MS.gene068227.t1 MTR_1g032250 27.187 320 218 7 18 330 42 353 2.10e-29 116
MS.gene068227.t1 MTR_2g068800 28.571 280 170 6 18 290 27 283 3.30e-29 114
MS.gene068227.t1 MTR_1g027310 28.213 319 175 10 34 347 38 307 5.99e-29 114
MS.gene068227.t1 MTR_0009s0480 29.818 275 160 6 12 270 11 268 7.76e-29 112
MS.gene068227.t1 MTR_7g056393 28.188 298 198 6 44 332 66 356 2.09e-28 114
MS.gene068227.t1 MTR_5g085330 26.837 313 204 7 54 354 12 311 2.32e-28 112
MS.gene068227.t1 MTR_2g083030 27.759 299 198 9 45 340 37 320 7.70e-28 111
MS.gene068227.t1 MTR_8g093980 24.384 365 239 10 2 345 18 366 2.85e-27 110
MS.gene068227.t1 MTR_4g115990 30.081 246 149 6 81 322 76 302 6.98e-27 108
MS.gene068227.t1 MTR_8g009080 29.864 221 147 4 48 266 97 311 2.22e-26 107
MS.gene068227.t1 MTR_8g009080 29.464 224 144 4 48 266 97 311 2.35e-26 107
MS.gene068227.t1 MTR_1g011580 27.174 276 194 5 63 336 73 343 8.94e-26 106
MS.gene068227.t1 MTR_7g451860 30.137 292 181 10 45 329 41 316 1.33e-25 105
MS.gene068227.t1 MTR_7g047670 30.137 292 181 10 45 329 41 316 1.33e-25 105
MS.gene068227.t1 MTR_8g009170 30.088 226 148 8 45 266 60 279 2.09e-25 104
MS.gene068227.t1 MTR_5g005570 28.374 289 187 6 45 329 37 309 6.48e-25 103
MS.gene068227.t1 MTR_7g056353 29.231 260 165 7 82 331 79 329 9.48e-25 105
MS.gene068227.t1 MTR_1g043810 30.000 260 164 10 18 269 25 274 1.02e-24 103
MS.gene068227.t1 MTR_8g009180 35.000 180 109 6 156 330 99 275 1.68e-24 101
MS.gene068227.t1 MTR_3g040410 25.407 307 210 9 54 353 17 311 2.67e-24 101
MS.gene068227.t1 MTR_4g123020 26.752 314 209 9 49 351 18 321 3.52e-24 101
MS.gene068227.t1 MTR_6g088665 27.389 314 190 8 45 330 18 321 1.42e-23 100
MS.gene068227.t1 MTR_6g088665 27.302 315 190 8 45 330 18 322 2.00e-23 99.8
MS.gene068227.t1 MTR_2g019370 28.159 277 180 7 67 329 42 313 2.69e-23 99.4
MS.gene068227.t1 MTR_1g043775 29.615 260 165 11 18 269 25 274 9.39e-23 97.1
MS.gene068227.t1 MTR_4g100600 27.036 307 192 11 44 331 8 301 1.36e-22 97.1
MS.gene068227.t1 MTR_7g078010 28.879 232 151 5 44 270 66 288 1.72e-22 96.3
MS.gene068227.t1 MTR_2g069060 27.273 231 158 4 43 270 25 248 3.15e-22 94.7
MS.gene068227.t1 MTR_4g074130 28.522 291 186 10 45 329 40 314 1.04e-21 94.7
MS.gene068227.t1 MTR_1g043770 26.882 279 181 11 1 266 1 269 1.55e-21 93.6
MS.gene068227.t1 MTR_8g461330 27.338 278 182 7 67 329 41 313 2.11e-21 94.0
MS.gene068227.t1 MTR_4g132770 36.842 133 78 3 206 334 29 159 2.89e-21 89.7
MS.gene068227.t1 MTR_2g025120 27.273 231 148 8 47 270 6 223 1.58e-20 89.4
MS.gene068227.t1 MTR_2g033270 27.742 310 191 12 57 350 25 317 1.96e-20 90.9
MS.gene068227.t1 MTR_6g092620 27.481 262 174 9 44 299 2 253 7.58e-20 89.0
MS.gene068227.t1 MTR_2g070870 26.277 274 182 8 67 332 42 303 6.76e-19 86.7
MS.gene068227.t1 MTR_3g464530 26.357 258 168 7 65 310 45 292 1.49e-18 85.5
MS.gene068227.t1 MTR_4g100590 25.249 301 187 10 43 321 2 286 1.92e-18 85.1
MS.gene068227.t1 MTR_1g086550 24.516 310 205 9 39 329 14 313 2.10e-18 85.5
MS.gene068227.t1 MTR_5g025090 23.592 284 202 6 65 344 20 292 2.30e-18 84.7
MS.gene068227.t1 MTR_4g096840 26.354 277 184 9 67 329 43 313 3.64e-18 84.7
MS.gene068227.t1 MTR_5g025050 24.638 276 179 6 65 329 20 277 4.28e-18 84.0
MS.gene068227.t1 MTR_3g083370 25.806 217 145 6 60 270 17 223 8.99e-18 81.6
MS.gene068227.t1 MTR_5g027230 24.549 277 178 7 65 329 21 278 4.41e-16 78.2
MS.gene068227.t1 MTR_4g021360 22.680 291 215 8 57 341 21 307 2.18e-15 76.3
MS.gene068227.t1 MTR_8g030880 24.675 308 204 10 42 336 7 299 8.26e-15 74.7
MS.gene068227.t1 MTR_4g011690 28.723 188 128 6 151 335 115 299 1.52e-14 73.9
MS.gene068227.t1 MTR_4g100600 27.350 234 139 10 44 258 8 229 4.56e-14 71.2
MS.gene068227.t1 MTR_7g090520 21.981 323 224 9 45 353 10 318 5.17e-14 72.4
MS.gene068227.t1 MTR_7g077670 25.275 273 186 8 75 337 36 300 7.72e-14 72.0
MS.gene068227.t1 MTR_4g011720 25.088 283 183 9 63 332 29 295 1.34e-13 71.2
MS.gene068227.t1 MTR_6g035160 32.787 122 79 3 216 335 45 165 4.58e-13 67.4
MS.gene068227.t1 MTR_4g021380 22.449 294 206 12 51 332 18 301 7.51e-13 68.9
MS.gene068227.t1 MTR_1g043840 27.326 172 115 3 167 330 55 224 2.41e-12 67.4
MS.gene068227.t1 MTR_7g056370 27.429 175 120 3 18 189 17 187 1.04e-11 64.3
MS.gene068227.t1 MTR_4g094900 23.474 213 142 6 42 235 5 215 2.93e-11 63.5
MS.gene068227.t1 MTR_3g464530 24.312 218 143 7 65 270 45 252 6.95e-11 62.4
MS.gene068227.t1 MTR_2g068850 31.343 134 88 4 23 154 32 163 7.38e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068227.t1 AT5G07480 56.780 354 147 3 1 349 1 353 9.35e-154 436
MS.gene068227.t1 AT5G07480 62.705 244 86 2 111 349 1 244 2.40e-116 337
MS.gene068227.t1 AT3G60290 48.083 339 169 4 18 352 21 356 3.60e-112 331
MS.gene068227.t1 AT2G44800 45.739 352 181 5 5 352 11 356 1.46e-109 324
MS.gene068227.t1 AT2G36690 41.298 339 184 7 18 346 26 359 4.11e-86 265
MS.gene068227.t1 AT2G36690 41.298 339 184 7 18 346 26 359 4.11e-86 265
MS.gene068227.t1 AT4G10500 36.624 314 190 5 23 331 19 328 1.38e-66 214
MS.gene068227.t1 AT5G24530 35.329 334 202 5 24 350 15 341 2.05e-66 213
MS.gene068227.t1 AT4G10490 33.754 317 200 5 21 331 15 327 4.58e-62 202
MS.gene068227.t1 AT1G17020 31.195 343 221 9 16 349 21 357 6.00e-53 179
MS.gene068227.t1 AT3G21420 35.082 305 161 8 64 349 75 361 1.47e-48 167
MS.gene068227.t1 AT4G25300 29.213 356 210 10 16 349 20 355 3.49e-48 166
MS.gene068227.t1 AT3G55970 31.519 349 217 11 18 350 19 361 4.57e-48 166
MS.gene068227.t1 AT1G78550 30.814 344 229 5 11 349 16 355 3.48e-47 164
MS.gene068227.t1 AT5G08640 31.454 337 209 8 1 329 3 325 4.56e-47 163
MS.gene068227.t1 AT5G08640 31.454 337 209 8 1 329 3 325 4.56e-47 163
MS.gene068227.t1 AT1G17010 30.868 311 206 7 43 349 52 357 4.69e-47 163
MS.gene068227.t1 AT2G38240 30.372 349 221 10 12 348 11 349 2.09e-45 159
MS.gene068227.t1 AT1G15550 32.746 284 169 6 66 336 70 344 9.40e-45 157
MS.gene068227.t1 AT4G16330 33.046 348 200 14 16 348 33 362 2.60e-44 156
MS.gene068227.t1 AT5G05600 31.965 341 213 11 18 346 32 365 1.08e-43 155
MS.gene068227.t1 AT4G25310 31.507 292 185 9 64 349 70 352 3.53e-43 153
MS.gene068227.t1 AT3G19000 29.052 327 207 6 26 330 6 329 1.48e-42 151
MS.gene068227.t1 AT3G19010 30.333 300 190 6 45 329 28 323 2.18e-42 151
MS.gene068227.t1 AT3G19010 30.333 300 190 6 45 329 28 323 2.18e-42 151
MS.gene068227.t1 AT5G54000 30.159 315 199 8 25 332 36 336 1.19e-41 149
MS.gene068227.t1 AT3G11180 30.117 342 218 9 18 346 61 394 1.32e-41 150
MS.gene068227.t1 AT1G06620 30.864 324 208 7 18 332 32 348 2.38e-41 148
MS.gene068227.t1 AT3G61400 32.872 289 184 6 57 339 77 361 3.09e-41 148
MS.gene068227.t1 AT3G11180 30.211 331 211 8 18 335 61 384 3.80e-41 149
MS.gene068227.t1 AT1G49390 29.043 303 196 7 25 322 35 323 8.32e-41 147
MS.gene068227.t1 AT1G78550 32.609 276 181 3 76 349 5 277 9.61e-41 144
MS.gene068227.t1 AT1G60980 29.070 344 222 8 23 350 35 372 1.55e-40 147
MS.gene068227.t1 AT5G51810 29.107 347 220 11 22 352 40 376 1.62e-40 147
MS.gene068227.t1 AT5G20400 29.043 303 196 7 25 322 35 323 1.84e-40 145
MS.gene068227.t1 AT3G51240 30.357 280 190 4 22 297 13 291 2.17e-40 145
MS.gene068227.t1 AT4G25420 27.434 339 231 6 22 348 38 373 6.52e-40 145
MS.gene068227.t1 AT2G30840 32.024 331 192 11 18 329 26 342 1.36e-39 144
MS.gene068227.t1 AT4G22880 28.274 336 221 9 13 331 7 339 2.34e-39 143
MS.gene068227.t1 AT4G22880 28.274 336 221 9 13 331 7 339 2.34e-39 143
MS.gene068227.t1 AT4G22880 28.274 336 221 9 13 331 7 339 2.34e-39 143
MS.gene068227.t1 AT1G03410 30.746 335 208 8 20 339 27 352 6.08e-39 142
MS.gene068227.t1 AT3G13610 28.235 340 225 8 18 349 32 360 6.96e-39 142
MS.gene068227.t1 AT1G03410 30.746 335 208 8 20 339 64 389 1.57e-38 142
MS.gene068227.t1 AT5G54000 32.692 260 164 7 80 332 1 256 2.38e-38 138
MS.gene068227.t1 AT1G55290 29.882 338 217 9 18 346 31 357 1.20e-37 139
MS.gene068227.t1 AT1G06640 30.137 292 190 8 63 347 83 367 1.35e-37 139
MS.gene068227.t1 AT5G63590 29.592 294 201 5 41 329 5 297 2.22e-37 136
MS.gene068227.t1 AT5G59530 30.303 330 192 10 21 329 32 344 2.44e-37 138
MS.gene068227.t1 AT5G43450 29.577 355 225 12 6 345 13 357 4.11e-37 137
MS.gene068227.t1 AT1G49390 31.048 248 162 6 80 322 1 244 5.07e-37 134
MS.gene068227.t1 AT1G06645 27.682 289 180 7 63 338 96 368 1.18e-36 136
MS.gene068227.t1 AT3G19010 29.333 300 163 7 45 329 28 293 1.31e-36 135
MS.gene068227.t1 AT5G07200 28.173 323 216 7 23 332 36 355 2.25e-36 135
MS.gene068227.t1 AT2G30840 31.722 331 187 12 18 329 26 336 2.84e-36 135
MS.gene068227.t1 AT1G80330 29.305 331 207 8 20 332 15 336 4.21e-36 134
MS.gene068227.t1 AT5G43440 28.986 345 215 14 18 345 29 360 9.59e-36 134
MS.gene068227.t1 AT5G20550 27.414 321 216 9 24 333 19 333 1.11e-35 133
MS.gene068227.t1 AT1G04380 31.864 295 179 8 44 329 44 325 1.32e-35 132
MS.gene068227.t1 AT1G06650 27.660 329 219 10 18 333 31 353 3.60e-35 132
MS.gene068227.t1 AT5G63600 27.036 307 210 7 30 331 14 311 3.67e-35 131
MS.gene068227.t1 AT3G12900 27.445 317 222 4 18 331 27 338 4.29e-35 132
MS.gene068227.t1 AT4G16330 33.333 261 154 9 97 348 7 256 4.37e-35 129
MS.gene068227.t1 AT1G77330 30.195 308 179 11 44 334 2 290 7.05e-35 130
MS.gene068227.t1 AT1G04350 30.556 324 197 11 21 329 30 340 8.60e-35 131
MS.gene068227.t1 AT1G80340 29.286 280 190 4 63 336 60 337 9.71e-35 130
MS.gene068227.t1 AT2G30830 31.752 274 176 7 57 325 67 334 1.72e-34 130
MS.gene068227.t1 AT5G63600 27.273 308 209 8 30 331 14 312 2.05e-34 129
MS.gene068227.t1 AT5G59540 29.448 326 207 7 18 329 30 346 2.35e-34 130
MS.gene068227.t1 AT3G55970 31.599 269 163 10 18 270 19 282 6.81e-34 127
MS.gene068227.t1 AT3G19000 28.839 267 165 6 26 270 6 269 8.43e-34 126
MS.gene068227.t1 AT4G25300 30.000 220 143 5 133 349 50 261 8.43e-33 123
MS.gene068227.t1 AT3G19010 31.148 244 145 7 45 271 28 265 1.85e-32 123
MS.gene068227.t1 AT5G12270 30.612 294 193 7 63 349 69 358 9.68e-32 122
MS.gene068227.t1 AT1G44090 28.358 335 204 13 19 332 38 357 1.07e-31 123
MS.gene068227.t1 AT1G06620 31.660 259 164 6 18 270 32 283 4.66e-31 119
MS.gene068227.t1 AT1G12010 26.537 309 209 8 47 350 9 304 6.06e-31 119
MS.gene068227.t1 AT1G03400 26.816 358 233 9 1 342 1 345 1.53e-30 119
MS.gene068227.t1 AT1G05010 30.325 277 174 10 44 313 3 267 2.26e-30 118
MS.gene068227.t1 AT2G25450 27.129 317 216 8 18 325 26 336 5.94e-30 118
MS.gene068227.t1 AT3G51240 32.195 205 136 3 95 297 4 207 1.80e-29 114
MS.gene068227.t1 AT5G51810 30.224 268 165 9 22 277 40 297 4.10e-29 114
MS.gene068227.t1 AT2G30840 31.698 265 151 9 18 266 26 276 5.47e-29 114
MS.gene068227.t1 AT4G21200 27.914 326 204 9 10 329 13 313 1.14e-28 114
MS.gene068227.t1 AT5G63595 29.365 252 150 6 44 293 24 249 1.31e-28 112
MS.gene068227.t1 AT4G25420 27.132 258 176 5 22 270 38 292 2.72e-28 112
MS.gene068227.t1 AT4G21690 27.046 281 192 4 67 336 61 339 4.95e-28 112
MS.gene068227.t1 AT5G05600 31.321 265 164 10 18 270 32 290 6.86e-28 110
MS.gene068227.t1 AT1G62380 26.246 301 200 10 41 334 3 288 1.50e-27 110
MS.gene068227.t1 AT1G78440 26.230 305 197 9 39 329 12 302 2.38e-27 110
MS.gene068227.t1 AT3G61400 32.407 216 140 4 57 270 77 288 4.47e-27 108
MS.gene068227.t1 AT5G43935 30.769 273 163 9 63 330 32 283 1.04e-26 107
MS.gene068227.t1 AT1G03400 25.130 386 232 10 1 342 1 373 2.55e-25 105
MS.gene068227.t1 AT1G06640 32.227 211 125 7 63 266 83 282 3.62e-25 104
MS.gene068227.t1 AT1G06640 32.227 211 125 7 63 266 83 282 5.72e-25 102
MS.gene068227.t1 AT4G25310 26.117 291 174 9 64 349 70 324 7.15e-25 103
MS.gene068227.t1 AT3G50210 24.407 295 197 9 38 307 1 294 1.28e-24 102
MS.gene068227.t1 AT3G50210 24.407 295 197 9 38 307 1 294 1.28e-24 102
MS.gene068227.t1 AT3G50210 24.407 295 197 9 38 307 1 294 1.28e-24 102
MS.gene068227.t1 AT1G04380 31.915 235 141 7 44 272 44 265 1.97e-24 101
MS.gene068227.t1 AT3G49620 24.354 271 189 8 63 320 60 327 5.31e-24 101
MS.gene068227.t1 AT5G43450 28.727 275 177 9 6 269 13 279 5.53e-24 100
MS.gene068227.t1 AT3G46500 29.392 296 182 12 43 321 15 300 6.58e-24 100
MS.gene068227.t1 AT3G49630 25.000 280 194 8 61 327 29 305 7.46e-24 100
MS.gene068227.t1 AT3G49630 25.000 280 194 8 61 327 33 309 8.07e-24 100
MS.gene068227.t1 AT1G50960 26.756 299 181 8 45 329 40 314 9.26e-24 100
MS.gene068227.t1 AT5G63580 31.276 243 145 9 36 270 12 240 1.20e-23 98.2
MS.gene068227.t1 AT5G63580 31.120 241 144 9 36 268 12 238 2.95e-23 97.4
MS.gene068227.t1 AT5G43440 27.985 268 169 11 18 272 29 285 4.01e-23 97.8
MS.gene068227.t1 AT1G06650 27.519 258 172 7 18 266 31 282 7.73e-23 97.4
MS.gene068227.t1 AT1G14130 26.241 282 199 3 65 344 24 298 1.50e-22 96.7
MS.gene068227.t1 AT3G46500 29.779 272 164 12 43 297 15 276 2.96e-22 95.5
MS.gene068227.t1 AT1G30040 26.936 297 192 10 44 329 30 312 6.11e-22 95.5
MS.gene068227.t1 AT2G19590 24.765 319 213 10 38 349 4 302 8.36e-22 94.7
MS.gene068227.t1 AT5G59540 28.409 264 169 6 18 270 30 284 1.40e-21 93.6
MS.gene068227.t1 AT3G46490 29.286 280 168 13 41 298 13 284 1.60e-21 94.0
MS.gene068227.t1 AT3G46490 28.713 303 186 13 41 321 13 307 2.48e-21 93.6
MS.gene068227.t1 AT1G02400 25.714 280 194 8 60 329 34 309 3.04e-21 93.6
MS.gene068227.t1 AT2G06960 35.185 162 87 7 178 337 1 146 5.09e-21 88.6
MS.gene068227.t1 AT1G47990 25.329 304 189 11 45 329 15 299 2.01e-20 90.9
MS.gene068227.t1 AT2G34555 25.658 304 202 10 36 329 18 307 1.48e-17 82.8
MS.gene068227.t1 AT2G19590 25.357 280 184 9 77 349 26 287 2.57e-17 81.6
MS.gene068227.t1 AT1G35190 27.758 281 163 10 41 294 8 275 4.79e-17 81.3
MS.gene068227.t1 AT1G14120 25.564 266 183 5 65 325 23 278 6.73e-17 80.9
MS.gene068227.t1 AT1G14120 25.564 266 183 5 65 325 23 278 6.73e-17 80.9
MS.gene068227.t1 AT1G14120 25.564 266 183 5 65 325 23 278 6.73e-17 80.9
MS.gene068227.t1 AT4G23340 27.083 288 180 11 70 342 30 302 4.25e-16 78.6
MS.gene068227.t1 AT3G49630 26.966 178 124 5 153 327 62 236 3.03e-15 75.1
MS.gene068227.t1 AT1G52820 22.039 304 210 9 45 335 12 301 1.14e-13 71.2
MS.gene068227.t1 AT3G50210 26.220 164 113 4 151 307 50 212 1.70e-13 70.1
MS.gene068227.t1 AT1G02400 23.552 259 180 8 24 273 3 252 6.53e-13 68.6
MS.gene068227.t1 AT1G52800 25.676 296 200 10 55 343 24 306 1.53e-12 68.2
MS.gene068227.t1 AT4G22870 34.737 95 57 3 239 331 4 95 9.76e-12 61.6
MS.gene068227.t1 AT1G28030 23.885 314 212 13 44 340 12 315 1.26e-11 65.5
MS.gene068227.t1 AT4G23340 31.915 141 89 4 206 342 47 184 1.87e-11 63.2
MS.gene068227.t1 AT3G46480 29.482 251 151 9 92 330 33 269 1.87e-11 64.3
MS.gene068227.t1 AT3G46500 28.729 181 117 7 151 321 48 226 6.55e-11 62.4
MS.gene068227.t1 AT3G46500 28.729 181 117 7 151 321 48 226 6.55e-11 62.4
MS.gene068227.t1 AT4G16770 27.234 235 138 9 45 258 22 244 7.97e-11 62.4

Find 65 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTTTCCCTATATTTCTT+AGG 0.135051 1.2:-32555239 None:intergenic
AAGCATGCATAGGCCAAATT+TGG 0.216766 1.2:+32551767 MS.gene068227:CDS
ACACTACGCTAACCCCTTAA+AGG 0.219340 1.2:+32553163 MS.gene068227:CDS
ATGCTTGTGCAATATCTTAC+TGG 0.257667 1.2:-32553095 None:intergenic
TATTACTAGTTTATTCAGTT+TGG 0.264028 1.2:+32555166 MS.gene068227:CDS
CAGAAAATCCATTTGATTAC+AGG 0.265038 1.2:+32553204 MS.gene068227:CDS
CCTCAAAATCCATTATTTGT+AGG 0.289347 1.2:-32555004 None:intergenic
TTTGGGAATGGATGATAAAA+TGG 0.298275 1.2:+32555184 MS.gene068227:CDS
CATGTGAATCCAATCCTTTA+AGG 0.298720 1.2:-32553177 None:intergenic
TAGTCTTGCTGTTGTTGATA+TGG 0.312834 1.2:+32551803 MS.gene068227:CDS
TTGTGAAGGCCTACAAATAA+TGG 0.320233 1.2:+32554995 MS.gene068227:CDS
ATTACTAGTTTATTCAGTTT+GGG 0.325763 1.2:+32555167 MS.gene068227:CDS
ATCAAAACCCTAAGAAATAT+AGG 0.344706 1.2:+32555231 MS.gene068227:CDS
TGCTTTCCCTATATTTCTTA+GGG 0.347171 1.2:-32555238 None:intergenic
CCATAGGGCTACCCTTAATA+AGG 0.352583 1.2:+32555127 MS.gene068227:CDS
AGTGAAGAAAGTGGGCTTAG+AGG 0.353522 1.2:+32554797 MS.gene068227:CDS
GAGTTGATAAAGTTCAGTTT+TGG 0.382685 1.2:+32553126 MS.gene068227:CDS
CGAGATTCATGTCGTCGCTT+AGG 0.388463 1.2:+32551876 MS.gene068227:CDS
CTAAATTTGCAGGGAAAAGA+TGG 0.389718 1.2:+32554758 MS.gene068227:intron
ATGTGAATCCAATCCTTTAA+GGG 0.410178 1.2:-32553176 None:intergenic
TCAAAACCCTAAGAAATATA+GGG 0.410763 1.2:+32555232 MS.gene068227:CDS
GGGAGGCCTAATGCAATATC+TGG 0.435679 1.2:-32554930 None:intergenic
CTTCCCTTCAGAAATATCAT+TGG 0.436621 1.2:-32555291 None:intergenic
TTCACAACTTTGGTATAGAA+TGG 0.437066 1.2:-32554979 None:intergenic
AAATTTGGCCTATGCATGCT+TGG 0.439870 1.2:-32551765 None:intergenic
ATGTAATACCTGTAATCAAA+TGG 0.446539 1.2:-32553212 None:intergenic
TTTGTAGGCCTTCACAACTT+TGG 0.457168 1.2:-32554989 None:intergenic
CATTGCTTAATACCTCAAAA+TGG 0.459426 1.2:-32555085 None:intergenic
CCTTATTAAGGGTAGCCCTA+TGG 0.460384 1.2:-32555127 None:intergenic
CCACAACCAGATATTGCATT+AGG 0.478746 1.2:+32554924 MS.gene068227:CDS
TAGTTTATTCAGTTTGGGAA+TGG 0.479376 1.2:+32555172 MS.gene068227:CDS
ACGCTAACCCCTTAAAGGAT+TGG 0.483604 1.2:+32553168 MS.gene068227:CDS
AAAACAGTACCACACATTCC+TGG 0.485740 1.2:+32555038 MS.gene068227:CDS
TGTACAAGAGTGTTGTCCAT+AGG 0.490999 1.2:+32555111 MS.gene068227:CDS
AGTTGTAGTTATTGTTCTTG+AGG 0.497276 1.2:-32555328 None:intergenic
GGTGCACTTCAAGTGCATCT+AGG 0.501281 1.2:+32555059 MS.gene068227:CDS
AACTGTAGTCAGAGTGTGGT+GGG 0.503267 1.2:-32554950 None:intergenic
GTACAAGAGTGTTGTCCATA+GGG 0.508641 1.2:+32555112 MS.gene068227:CDS
ACAATTTCACAAATGGAGAA+TGG 0.517104 1.2:+32551663 None:intergenic
TAAATTTGCAGGGAAAAGAT+GGG 0.521877 1.2:+32554759 MS.gene068227:intron
GCTACCAATGATATTTCTGA+AGG 0.530870 1.2:+32555287 MS.gene068227:CDS
TATTGCACAAGCATAAAAGA+TGG 0.533424 1.2:+32553104 MS.gene068227:CDS
GATATGGCTGCTCTTAAGAA+TGG 0.543544 1.2:+32551819 MS.gene068227:CDS
CTAAAGTATAGAATGAACTT+AGG 0.551587 1.2:-32551692 None:intergenic
TTGTAATTCCAAGCATGCAT+AGG 0.551756 1.2:+32551757 MS.gene068227:CDS
GGAGACTGCTAAAGAGCTTG+TGG 0.558089 1.2:+32555205 MS.gene068227:CDS
CCTAATGCAATATCTGGTTG+TGG 0.567055 1.2:-32554924 None:intergenic
TTAAGAATGGCTCAACATCA+AGG 0.567305 1.2:+32551832 MS.gene068227:CDS
GCAATATCTGGTTGTGGACA+AGG 0.569688 1.2:-32554918 None:intergenic
TTGTCAAGAAGTGAAGAAAG+TGG 0.576450 1.2:+32554788 MS.gene068227:CDS
TGTGAATCCAATCCTTTAAG+GGG 0.586511 1.2:-32553175 None:intergenic
ATTCTATACCAAAGTTGTGA+AGG 0.586627 1.2:+32554981 MS.gene068227:CDS
TGTCAAGAAGTGAAGAAAGT+GGG 0.595600 1.2:+32554789 MS.gene068227:CDS
AGTGAGTGAATCAGTGCTAG+AGG 0.600564 1.2:+32552992 MS.gene068227:CDS
AGATGCACTTGAAGTGCACC+AGG 0.600988 1.2:-32555056 None:intergenic
GCACTGATTCACTCACTCCA+TGG 0.604709 1.2:-32552986 None:intergenic
AACTTTGGTATAGAATGGTA+AGG 0.607016 1.2:-32554974 None:intergenic
CTACCAATGATATTTCTGAA+GGG 0.612562 1.2:+32555288 MS.gene068227:CDS
TAAAGGATTGGATTCACATG+TGG 0.626013 1.2:+32553180 MS.gene068227:CDS
CAACTGTAGTCAGAGTGTGG+TGG 0.666364 1.2:-32554951 None:intergenic
AGGCAACTGTAGTCAGAGTG+TGG 0.669050 1.2:-32554954 None:intergenic
TGTAGTCAGAGTGTGGTGGG+AGG 0.677354 1.2:-32554947 None:intergenic
GCTAGAGGAAGCTTTATCTG+TGG 0.690147 1.2:+32553007 MS.gene068227:CDS
TGAAGTGCACCAGGAATGTG+TGG 0.694342 1.2:-32555047 None:intergenic
ATATCTGGTTGTGGACAAGG+TGG 0.722599 1.2:-32554915 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAATAAATAAAAAATTT+CGG - chr1.2:32554404-32554423 None:intergenic 0.0%
!! AATAAAATGTTGATATATTT+AGG - chr1.2:32554236-32554255 None:intergenic 10.0%
!! ATAAAATGTTGATATATTTA+GGG - chr1.2:32554235-32554254 None:intergenic 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG - chr1.2:32553797-32553816 None:intergenic 10.0%
!!! AAATTCTATTTTTTTTCTTT+TGG + chr1.2:32554498-32554517 MS.gene068227:intron 10.0%
!!! AATTTCATTAAAAATTTTGA+AGG + chr1.2:32554556-32554575 MS.gene068227:intron 10.0%
!!! ACCATTTTATTATATTTAAA+AGG + chr1.2:32553287-32553306 MS.gene068227:intron 10.0%
!!! ATAAGTAAATTTTTTTTTGT+AGG - chr1.2:32553736-32553755 None:intergenic 10.0%
!!! ATTTTTTTTAATTAATCAAG+AGG + chr1.2:32552799-32552818 MS.gene068227:intron 10.0%
!!! TAAGTAAATTTTTTTTTGTA+GGG - chr1.2:32553735-32553754 None:intergenic 10.0%
!!! TCAAAAGTTTTTTTTTTTTT+GGG - chr1.2:32554718-32554737 None:intergenic 10.0%
!!! TCCTTTTAAATATAATAAAA+TGG - chr1.2:32553291-32553310 None:intergenic 10.0%
!!! TCTACATTATATATTTTTTT+AGG - chr1.2:32551986-32552005 None:intergenic 10.0%
!!! TTCAAAAGTTTTTTTTTTTT+TGG - chr1.2:32554719-32554738 None:intergenic 10.0%
!!! TTTTAGTTTAAATAAGTAAA+TGG + chr1.2:32554206-32554225 MS.gene068227:intron 10.0%
!! AAAATATATAATGTAGACTT+TGG + chr1.2:32551989-32552008 MS.gene068227:intron 15.0%
!! AAGCATAAATTAAACAAATT+TGG + chr1.2:32554046-32554065 MS.gene068227:intron 15.0%
!! AATAATAGTTGAGATTTAAA+AGG - chr1.2:32552782-32552801 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr1.2:32553706-32553725 None:intergenic 15.0%
!! AATGGTATTAAAATTAAGTA+AGG + chr1.2:32554118-32554137 MS.gene068227:intron 15.0%
!! AATTTCATTGAAAAATATGA+AGG - chr1.2:32554347-32554366 None:intergenic 15.0%
!! ACTAAAATAGTATATATCTT+AGG - chr1.2:32554193-32554212 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG + chr1.2:32553928-32553947 MS.gene068227:intron 15.0%
!! ATCTTCAAAAAAAAAAACAA+AGG - chr1.2:32552394-32552413 None:intergenic 15.0%
!! ATTTCAAAATTCAGAAAAAA+TGG - chr1.2:32552146-32552165 None:intergenic 15.0%
!! CTAAAATAGTATATATCTTA+GGG - chr1.2:32554192-32554211 None:intergenic 15.0%
!! TAAAATGTTGATATATTTAG+GGG - chr1.2:32554234-32554253 None:intergenic 15.0%
!! TCTTCAAAAAAAAAAACAAA+GGG - chr1.2:32552393-32552412 None:intergenic 15.0%
!! TCTTCAAAGAAAAAAATAAA+GGG - chr1.2:32552359-32552378 None:intergenic 15.0%
!! TTATTAGAGTAATGTAATAT+GGG - chr1.2:32553415-32553434 None:intergenic 15.0%
!! TTCTTCAAAGAAAAAAATAA+AGG - chr1.2:32552360-32552379 None:intergenic 15.0%
!! TTTATTAGAGTAATGTAATA+TGG - chr1.2:32553416-32553435 None:intergenic 15.0%
!!! AAACAAAATTTATTTTAGCA+GGG - chr1.2:32553768-32553787 None:intergenic 15.0%
!!! AAATTTTTGCGAATTTTTTT+CGG + chr1.2:32553962-32553981 MS.gene068227:intron 15.0%
!!! GAAAAAAGTATAATAACAAA+GGG - chr1.2:32552429-32552448 None:intergenic 15.0%
!!! TAAACAAAATTTATTTTAGC+AGG - chr1.2:32553769-32553788 None:intergenic 15.0%
!!! TGAAAAAAGTATAATAACAA+AGG - chr1.2:32552430-32552449 None:intergenic 15.0%
!!! TTAATGAAATTTTCCAAAAA+TGG - chr1.2:32554547-32554566 None:intergenic 15.0%
!! AAAATGTTGATATATTTAGG+GGG - chr1.2:32554233-32554252 None:intergenic 20.0%
!! AACAGTTCTTGAAAAAATAT+AGG - chr1.2:32552044-32552063 None:intergenic 20.0%
!! ACAGTTCTTGAAAAAATATA+GGG - chr1.2:32552043-32552062 None:intergenic 20.0%
!! ACATTATTTGACCAAAAAAT+GGG + chr1.2:32554583-32554602 MS.gene068227:intron 20.0%
!! AGTTAACTCTTATAAGATAT+AGG + chr1.2:32553631-32553650 MS.gene068227:intron 20.0%
!! ATCAAATGTTGGTATATTTA+AGG + chr1.2:32554673-32554692 MS.gene068227:intron 20.0%
!! GTTAACTCTTATAAGATATA+GGG + chr1.2:32553632-32553651 MS.gene068227:intron 20.0%
!! TCAAATGTTGGTATATTTAA+GGG + chr1.2:32554674-32554693 MS.gene068227:intron 20.0%
!! TGATATGATGATATATAACA+TGG - chr1.2:32553478-32553497 None:intergenic 20.0%
!! TTATTAACATTTCAAAGTGT+TGG + chr1.2:32553583-32553602 MS.gene068227:intron 20.0%
!! TTTACAACAAATTTAAGAAG+TGG - chr1.2:32552268-32552287 None:intergenic 20.0%
!!! AAATTCACTTTTTCTTTTGT+CGG - chr1.2:32553053-32553072 None:intergenic 20.0%
!!! ATTACTAGTTTATTCAGTTT+GGG + chr1.2:32555167-32555186 MS.gene068227:CDS 20.0%
!!! ATTTCATGAATGGAAAATTT+TGG + chr1.2:32554611-32554630 MS.gene068227:intron 20.0%
!!! ATTTCTCTCTATCTATTTTT+AGG + chr1.2:32552668-32552687 MS.gene068227:intron 20.0%
!!! CAATGAAATTTTCCAAAAAA+AGG + chr1.2:32554357-32554376 MS.gene068227:intron 20.0%
!!! CATAATATTCTACCTTTTTT+TGG - chr1.2:32554372-32554391 None:intergenic 20.0%
!!! CATAATTTTCTATCCATTTT+TGG + chr1.2:32554531-32554550 MS.gene068227:intron 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG - chr1.2:32554016-32554035 None:intergenic 20.0%
!!! TATAGGGTTAATTATGTTTT+TGG + chr1.2:32553648-32553667 MS.gene068227:intron 20.0%
!!! TATATATATCGATTCTCATT+TGG + chr1.2:32552934-32552953 MS.gene068227:intron 20.0%
!!! TATTACTAGTTTATTCAGTT+TGG + chr1.2:32555166-32555185 MS.gene068227:CDS 20.0%
!!! TTGGAATTACAAAATTTTGA+GGG - chr1.2:32551749-32551768 None:intergenic 20.0%
!!! TTTTGGGTTAAATAAGTAAA+TGG - chr1.2:32554702-32554721 None:intergenic 20.0%
!!! TTTTTTGTAGGGATTAAAAA+TGG + chr1.2:32554100-32554119 MS.gene068227:intron 20.0%
! AAAATCCTTCTAAATTTGCA+GGG + chr1.2:32554749-32554768 MS.gene068227:intron 25.0%
! AAACAAATTTGGATTGAGTA+AGG + chr1.2:32554057-32554076 MS.gene068227:intron 25.0%
! AAAGCATAGGAAATATTTAG+AGG - chr1.2:32554265-32554284 None:intergenic 25.0%
! AAGCATAGGAAATATTTAGA+GGG - chr1.2:32554264-32554283 None:intergenic 25.0%
! ATCAAAACCCTAAGAAATAT+AGG + chr1.2:32555231-32555250 MS.gene068227:CDS 25.0%
! ATGTAATACCTGTAATCAAA+TGG - chr1.2:32553215-32553234 None:intergenic 25.0%
! CAAATGTTGGTATATTTAAG+GGG + chr1.2:32554675-32554694 MS.gene068227:intron 25.0%
! CATTATTTGACCAAAAAATG+GGG + chr1.2:32554584-32554603 MS.gene068227:intron 25.0%
! CTAAAGTATAGAATGAACTT+AGG - chr1.2:32551695-32551714 None:intergenic 25.0%
! CTAACAAAAAACCTTGAAAA+TGG + chr1.2:32554864-32554883 MS.gene068227:CDS 25.0%
! GACATTATTTGACCAAAAAA+TGG + chr1.2:32554582-32554601 MS.gene068227:intron 25.0%
! TATAATAGCAATGTAGTCTT+TGG + chr1.2:32551958-32551977 MS.gene068227:intron 25.0%
! TCAAAAAAAAAAACAAAGGG+TGG - chr1.2:32552390-32552409 None:intergenic 25.0%
! TCAAAACCCTAAGAAATATA+GGG + chr1.2:32555232-32555251 MS.gene068227:CDS 25.0%
! TCAAAGAAAAAAATAAAGGG+TGG - chr1.2:32552356-32552375 None:intergenic 25.0%
! TGTCGGTAAATCAAAAAATT+TGG - chr1.2:32553036-32553055 None:intergenic 25.0%
!! AAAAGTATAATAACAAAGGG+TGG - chr1.2:32552426-32552445 None:intergenic 25.0%
!! CAAAAGCCTAAAGAAAATTT+TGG + chr1.2:32554640-32554659 MS.gene068227:intron 25.0%
!! CAAAATTTTCTTTAGGCTTT+TGG - chr1.2:32554642-32554661 None:intergenic 25.0%
!! CTAAATATTTCCTATGCTTT+TGG + chr1.2:32554265-32554284 MS.gene068227:intron 25.0%
!! CTTAGGGTTAATTATGTTTT+TGG - chr1.2:32554176-32554195 None:intergenic 25.0%
!! CTTGGAATTACAAAATTTTG+AGG - chr1.2:32551750-32551769 None:intergenic 25.0%
!! GTATGAATTGATTTCATAGA+TGG - chr1.2:32554306-32554325 None:intergenic 25.0%
!! TAGACTTTGGTAATTGATTT+GGG + chr1.2:32552002-32552021 MS.gene068227:intron 25.0%
!! TAGAGATTTTCTTGATTTTC+TGG + chr1.2:32555265-32555284 MS.gene068227:CDS 25.0%
!!! AAATTCTCTTTTTCATGTCT+TGG + chr1.2:32552206-32552225 MS.gene068227:intron 25.0%
!!! AGGTTTTTTGTTAGATTTGA+TGG - chr1.2:32554858-32554877 None:intergenic 25.0%
!!! GCATATTTTGATTCCAAATT+TGG - chr1.2:32551783-32551802 None:intergenic 25.0%
!!! TCTTGTTTTGTCCTTATTAA+GGG - chr1.2:32555141-32555160 None:intergenic 25.0%
!!! TTCTTGTTTTGTCCTTATTA+AGG - chr1.2:32555142-32555161 None:intergenic 25.0%
AAACCGACTATACAAAAGTT+TGG - chr1.2:32552735-32552754 None:intergenic 30.0%
AAAGGAAAGTTTGTATTACC+AGG - chr1.2:32552471-32552490 None:intergenic 30.0%
AACTTTGGTATAGAATGGTA+AGG - chr1.2:32554977-32554996 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG + chr1.2:32554133-32554152 MS.gene068227:intron 30.0%
ACAATACACCACCAAAAAAA+GGG - chr1.2:32552626-32552645 None:intergenic 30.0%
AGAAGTTTAGAGGATTGAAA+AGG - chr1.2:32552068-32552087 None:intergenic 30.0%
AGTTGTAGTTATTGTTCTTG+AGG - chr1.2:32555331-32555350 None:intergenic 30.0%
ATGTGAATCCAATCCTTTAA+GGG - chr1.2:32553179-32553198 None:intergenic 30.0%
ATTCTATACCAAAGTTGTGA+AGG + chr1.2:32554981-32555000 MS.gene068227:CDS 30.0%
CAAAATCCTTCTAAATTTGC+AGG + chr1.2:32554748-32554767 MS.gene068227:intron 30.0%
CAGAAAATCCATTTGATTAC+AGG + chr1.2:32553204-32553223 MS.gene068227:CDS 30.0%
CAGGTATTACATTCACTAAA+AGG + chr1.2:32553223-32553242 MS.gene068227:intron 30.0%
CATTGCTTAATACCTCAAAA+TGG - chr1.2:32555088-32555107 None:intergenic 30.0%
CCTCAAAATCCATTATTTGT+AGG - chr1.2:32555007-32555026 None:intergenic 30.0%
GATTCTCATTTGGTTGAATT+TGG + chr1.2:32552944-32552963 MS.gene068227:intron 30.0%
GTGTTAAGAACGTTGTTAAA+AGG - chr1.2:32553992-32554011 None:intergenic 30.0%
TAAATTTGCAGGGAAAAGAT+GGG + chr1.2:32554759-32554778 MS.gene068227:intron 30.0%
TAGTTTATTCAGTTTGGGAA+TGG + chr1.2:32555172-32555191 MS.gene068227:CDS 30.0%
TATGTATTCCAGTTGAACAA+TGG + chr1.2:32553369-32553388 MS.gene068227:intron 30.0%
TATTGCACAAGCATAAAAGA+TGG + chr1.2:32553104-32553123 MS.gene068227:CDS 30.0%
TGCTTTCCCTATATTTCTTA+GGG - chr1.2:32555241-32555260 None:intergenic 30.0%
TTCACAACTTTGGTATAGAA+TGG - chr1.2:32554982-32555001 None:intergenic 30.0%
TTTGGGAATGGATGATAAAA+TGG + chr1.2:32555184-32555203 MS.gene068227:CDS 30.0%
! AAGCCTAAAGAAAATTTTGG+AGG + chr1.2:32554643-32554662 MS.gene068227:intron 30.0%
! AGCCTAAAGAAAATTTTGGA+GGG + chr1.2:32554644-32554663 MS.gene068227:intron 30.0%
! ATGCCAAACTTTTGTATAGT+CGG + chr1.2:32552729-32552748 MS.gene068227:intron 30.0%
! CAAGTTTAGAACACTATGAA+AGG + chr1.2:32553831-32553850 MS.gene068227:intron 30.0%
! CTACCAATGATATTTCTGAA+GGG + chr1.2:32555288-32555307 MS.gene068227:CDS 30.0%
! GTAGACTTTGGTAATTGATT+TGG + chr1.2:32552001-32552020 MS.gene068227:intron 30.0%
! GTTGAATTTGGAAACTTTTC+AGG + chr1.2:32552956-32552975 MS.gene068227:intron 30.0%
! TACAAGATCGCAATTTTGTA+GGG - chr1.2:32553675-32553694 None:intergenic 30.0%
! TTACAAGATCGCAATTTTGT+AGG - chr1.2:32553676-32553695 None:intergenic 30.0%
!! CTGTAATCAAATGGATTTTC+TGG - chr1.2:32553206-32553225 None:intergenic 30.0%
!! TCATAGATGGAAAGTTTTAG+AGG - chr1.2:32554293-32554312 None:intergenic 30.0%
!! TTGATAAAGTTCAGTTTTGG+AGG + chr1.2:32553129-32553148 MS.gene068227:CDS 30.0%
!!! CATAGATGGAAAGTTTTAGA+GGG - chr1.2:32554292-32554311 None:intergenic 30.0%
!!! CATTTTGAGGTATTAAGCAA+TGG + chr1.2:32555086-32555105 MS.gene068227:CDS 30.0%
!!! CCTACAAATAATGGATTTTG+AGG + chr1.2:32555004-32555023 MS.gene068227:CDS 30.0%
!!! GAGTGCTGAAATTTTTTGTA+GGG + chr1.2:32554089-32554108 MS.gene068227:intron 30.0%
!!! GAGTTGATAAAGTTCAGTTT+TGG + chr1.2:32553126-32553145 MS.gene068227:CDS 30.0%
!!! TGAAATTACTCCCCATTTTT+TGG - chr1.2:32554597-32554616 None:intergenic 30.0%
!!! TGAGTGCTGAAATTTTTTGT+AGG + chr1.2:32554088-32554107 MS.gene068227:intron 30.0%
!!! TGATAAAGTTCAGTTTTGGA+GGG + chr1.2:32553130-32553149 MS.gene068227:CDS 30.0%
!!! TTTTTGCGAATTTTTTTCGG+AGG + chr1.2:32553965-32553984 MS.gene068227:intron 30.0%
ACTAACTCGTGACATACATA+TGG - chr1.2:32553510-32553529 None:intergenic 35.0%
AGTTTGTATTACCAGGAAGT+AGG - chr1.2:32552464-32552483 None:intergenic 35.0%
ATGCTTGTGCAATATCTTAC+TGG - chr1.2:32553098-32553117 None:intergenic 35.0%
ATGGGGAGTAATTTCATGAA+TGG + chr1.2:32554601-32554620 MS.gene068227:intron 35.0%
CATGTGAATCCAATCCTTTA+AGG - chr1.2:32553180-32553199 None:intergenic 35.0%
CTAAATTTGCAGGGAAAAGA+TGG + chr1.2:32554758-32554777 MS.gene068227:intron 35.0%
CTGCTTTCCCTATATTTCTT+AGG - chr1.2:32555242-32555261 None:intergenic 35.0%
CTTCCCTTCAGAAATATCAT+TGG - chr1.2:32555294-32555313 None:intergenic 35.0%
GACAATACACCACCAAAAAA+AGG - chr1.2:32552627-32552646 None:intergenic 35.0%
GAGGGACTAAAATCAAATGT+TGG + chr1.2:32554662-32554681 MS.gene068227:intron 35.0%
GTGCGAGAAACTTTGAATAT+GGG + chr1.2:32552178-32552197 MS.gene068227:intron 35.0%
GTTTGTATTACCAGGAAGTA+GGG - chr1.2:32552463-32552482 None:intergenic 35.0%
TAAAGGATTGGATTCACATG+TGG + chr1.2:32553180-32553199 MS.gene068227:CDS 35.0%
TCGTGACATACATATGGTTA+TGG - chr1.2:32553504-32553523 None:intergenic 35.0%
TGTCAAGAAGTGAAGAAAGT+GGG + chr1.2:32554789-32554808 MS.gene068227:CDS 35.0%
TGTGAATCCAATCCTTTAAG+GGG - chr1.2:32553178-32553197 None:intergenic 35.0%
TGTGCGAGAAACTTTGAATA+TGG + chr1.2:32552177-32552196 MS.gene068227:intron 35.0%
TTAAGAATGGCTCAACATCA+AGG + chr1.2:32551832-32551851 MS.gene068227:CDS 35.0%
TTGTAATTCCAAGCATGCAT+AGG + chr1.2:32551757-32551776 MS.gene068227:CDS 35.0%
TTGTCAAGAAGTGAAGAAAG+TGG + chr1.2:32554788-32554807 MS.gene068227:CDS 35.0%
TTGTGAAGGCCTACAAATAA+TGG + chr1.2:32554995-32555014 MS.gene068227:CDS 35.0%
TTTGTATTACCAGGAAGTAG+GGG - chr1.2:32552462-32552481 None:intergenic 35.0%
! AACTTTCCTTTTCATTCCGT+CGG + chr1.2:32552480-32552499 MS.gene068227:intron 35.0%
! ACAAGATCGCAATTTTGTAG+GGG - chr1.2:32553674-32553693 None:intergenic 35.0%
! CTTTTCCCTGCAAATTTAGA+AGG - chr1.2:32554757-32554776 None:intergenic 35.0%
! GCTACCAATGATATTTCTGA+AGG + chr1.2:32555287-32555306 MS.gene068227:CDS 35.0%
! GTCCCTCCAAAATTTTCTTT+AGG - chr1.2:32554649-32554668 None:intergenic 35.0%
! GTTTCTCGCACATTCTATTT+TGG - chr1.2:32552169-32552188 None:intergenic 35.0%
! TACAAGGTCGCAATTTTGTA+GGG + chr1.2:32554149-32554168 MS.gene068227:intron 35.0%
! TCACTTGCATTCCATTTTCA+AGG - chr1.2:32554878-32554897 None:intergenic 35.0%
! TTACAAGGTCGCAATTTTGT+AGG + chr1.2:32554148-32554167 MS.gene068227:intron 35.0%
!! TAGTCTTGCTGTTGTTGATA+TGG + chr1.2:32551803-32551822 MS.gene068227:CDS 35.0%
!! TGGATTTTGAGGACAAAACT+TGG + chr1.2:32555015-32555034 MS.gene068227:CDS 35.0%
!!! TATGTCACGAGTTAGTTTTG+TGG + chr1.2:32553514-32553533 MS.gene068227:intron 35.0%
!!! TGTCTTGTCTTCCCTTTTTT+TGG + chr1.2:32552612-32552631 MS.gene068227:intron 35.0%
AAAACAGTACCACACATTCC+TGG + chr1.2:32555038-32555057 MS.gene068227:CDS 40.0%
AAATTTGGCCTATGCATGCT+TGG - chr1.2:32551768-32551787 None:intergenic 40.0%
AAGCATGCATAGGCCAAATT+TGG + chr1.2:32551767-32551786 MS.gene068227:CDS 40.0%
AGACACATGCATGTAAGAGT+AGG - chr1.2:32553253-32553272 None:intergenic 40.0%
ATGGAATTGCAGTGATGTCA+CGG - chr1.2:32553459-32553478 None:intergenic 40.0%
CCACAACCAGATATTGCATT+AGG + chr1.2:32554924-32554943 MS.gene068227:CDS 40.0%
CCTAATGCAATATCTGGTTG+TGG - chr1.2:32554927-32554946 None:intergenic 40.0%
GATATGGCTGCTCTTAAGAA+TGG + chr1.2:32551819-32551838 MS.gene068227:CDS 40.0%
GTAGAGTTCCATTGTTCAAC+TGG - chr1.2:32553380-32553399 None:intergenic 40.0%
TGCACACAAAATCAGGACAA+AGG - chr1.2:32552710-32552729 None:intergenic 40.0%
TTGTATTACCAGGAAGTAGG+GGG - chr1.2:32552461-32552480 None:intergenic 40.0%
TTTGGCATGCACACAAAATC+AGG - chr1.2:32552717-32552736 None:intergenic 40.0%
TTTGTAGGCCTTCACAACTT+TGG - chr1.2:32554992-32555011 None:intergenic 40.0%
! TTTAGAGGGACCAAAAGCAT+AGG - chr1.2:32554278-32554297 None:intergenic 40.0%
!! GTACAAGAGTGTTGTCCATA+GGG + chr1.2:32555112-32555131 MS.gene068227:CDS 40.0%
!! TGTACAAGAGTGTTGTCCAT+AGG + chr1.2:32555111-32555130 MS.gene068227:CDS 40.0%
!! TTGATTTGGGCTTGTACATG+AGG + chr1.2:32552015-32552034 MS.gene068227:intron 40.0%
!!! ACTTTTCAGGTTGTGAACCA+TGG + chr1.2:32552969-32552988 MS.gene068227:intron 40.0%
!!! CTTGTCTTCCCTTTTTTTGG+TGG + chr1.2:32552615-32552634 MS.gene068227:intron 40.0%
AACTGTAGTCAGAGTGTGGT+GGG - chr1.2:32554953-32554972 None:intergenic 45.0%
AAGATGCGCGAGAAGTTTAG+AGG - chr1.2:32552078-32552097 None:intergenic 45.0%
ACACTACGCTAACCCCTTAA+AGG + chr1.2:32553163-32553182 MS.gene068227:CDS 45.0%
ACGCTAACCCCTTAAAGGAT+TGG + chr1.2:32553168-32553187 MS.gene068227:CDS 45.0%
AGTGAGTGAATCAGTGCTAG+AGG + chr1.2:32552992-32553011 MS.gene068227:CDS 45.0%
ATATCTGGTTGTGGACAAGG+TGG - chr1.2:32554918-32554937 None:intergenic 45.0%
CCATAGGGCTACCCTTAATA+AGG + chr1.2:32555127-32555146 MS.gene068227:CDS 45.0%
CCTTATTAAGGGTAGCCCTA+TGG - chr1.2:32555130-32555149 None:intergenic 45.0%
GCAATATCTGGTTGTGGACA+AGG - chr1.2:32554921-32554940 None:intergenic 45.0%
TTGGTGTGTGTTTGAATCCG+CGG + chr1.2:32552225-32552244 MS.gene068227:intron 45.0%
! AGTGAAGAAAGTGGGCTTAG+AGG + chr1.2:32554797-32554816 MS.gene068227:CDS 45.0%
! CAATACTATGCTAGCACCGA+CGG - chr1.2:32552499-32552518 None:intergenic 45.0%
! GCATCTAGGTGACCATTTTG+AGG + chr1.2:32555073-32555092 MS.gene068227:CDS 45.0%
! GCTAGAGGAAGCTTTATCTG+TGG + chr1.2:32553007-32553026 MS.gene068227:CDS 45.0%
!!! ACTTTTTTCCCCCTACTTCC+TGG + chr1.2:32552450-32552469 MS.gene068227:intron 45.0%
!! AAATATCATTATTTATTTAA+AGG - chr1.2:32552652-32552671 None:intergenic 5.0%
AGATGCACTTGAAGTGCACC+AGG - chr1.2:32555059-32555078 None:intergenic 50.0%
AGGCAACTGTAGTCAGAGTG+TGG - chr1.2:32554957-32554976 None:intergenic 50.0%
ATCACCCAGTTAGAGAACCG+CGG - chr1.2:32552245-32552264 None:intergenic 50.0%
CAACTGTAGTCAGAGTGTGG+TGG - chr1.2:32554954-32554973 None:intergenic 50.0%
CGAGATTCATGTCGTCGCTT+AGG + chr1.2:32551876-32551895 MS.gene068227:CDS 50.0%
GAATCCGCGGTTCTCTAACT+GGG + chr1.2:32552238-32552257 MS.gene068227:intron 50.0%
GGAGACTGCTAAAGAGCTTG+TGG + chr1.2:32555205-32555224 MS.gene068227:CDS 50.0%
GGGAGGCCTAATGCAATATC+TGG - chr1.2:32554933-32554952 None:intergenic 50.0%
GGTGCACTTCAAGTGCATCT+AGG + chr1.2:32555059-32555078 MS.gene068227:CDS 50.0%
TGAAGTGCACCAGGAATGTG+TGG - chr1.2:32555050-32555069 None:intergenic 50.0%
TGAATCCGCGGTTCTCTAAC+TGG + chr1.2:32552237-32552256 MS.gene068227:intron 50.0%
!! CTAGCACCGACGGAATGAAA+AGG - chr1.2:32552489-32552508 None:intergenic 50.0%
!! GCACTGATTCACTCACTCCA+TGG - chr1.2:32552989-32553008 None:intergenic 50.0%
! TGTAGTCAGAGTGTGGTGGG+AGG - chr1.2:32554950-32554969 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 32551675 32555352 32551675 ID=MS.gene068227
chr1.2 mRNA 32551675 32555352 32551675 ID=MS.gene068227.t1;Parent=MS.gene068227
chr1.2 exon 32551675 32551908 32551675 ID=MS.gene068227.t1.exon1;Parent=MS.gene068227.t1
chr1.2 CDS 32551675 32551908 32551675 ID=cds.MS.gene068227.t1;Parent=MS.gene068227.t1
chr1.2 exon 32552978 32553225 32552978 ID=MS.gene068227.t1.exon2;Parent=MS.gene068227.t1
chr1.2 CDS 32552978 32553225 32552978 ID=cds.MS.gene068227.t1;Parent=MS.gene068227.t1
chr1.2 exon 32554770 32555352 32554770 ID=MS.gene068227.t1.exon3;Parent=MS.gene068227.t1
chr1.2 CDS 32554770 32555352 32554770 ID=cds.MS.gene068227.t1;Parent=MS.gene068227.t1
Gene Sequence

>MS.gene068227

ATGGAGAATGGTGAAGACCTAAGTTCATTCTATACTTTAGACAATGCTCAAGAGAAGAGTATCTCTCATGTCCCTCAAAATTTTGTAATTCCAAGCATGCATAGGCCAAATTTGGAATCAAAATATGCTAGTCTTGCTGTTGTTGATATGGCTGCTCTTAAGAATGGCTCAACATCAAGGTCTCGTGTTATTCAAGAAATTCGAGATTCATGTCGTCGCTTAGGTTTCTTTCAAGTAAGTTTCTTGATTTAATATTATGAGTAATACTAATTAATTAACTTCTTATAATAGCAATGTAGTCTTTGGATCCTAAAAAAATATATAATGTAGACTTTGGTAATTGATTTGGGCTTGTACATGAGGCACCCTATATTTTTTCAAGAACTGTTTCCTTTTCAATCCTCTAAACTTCTCGCGCATCTTATGATATTATATAATTCGAAAGATGTTAAAAAAGTTCAAAAATATCCATTTTTTCTGAATTTTGAAATCCAAAATAGAATGTGCGAGAAACTTTGAATATGGGAAAATAAATTCTCTTTTTCATGTCTTGGTGTGTGTTTGAATCCGCGGTTCTCTAACTGGGTGATCCACTTCTTAAATTTGTTGTAAACATACACTGAGCATAAAAATACATATTCAAGCACATGCTTAAATATGTGTCAGCAACATTTTTTTCCACCCTTTATTTTTTTCTTTGAAGAAATTTTTTCCACCCTTTGTTTTTTTTTTTGAAGATTTTTTTTTTCCACCCTTTGTTATTATACTTTTTTCAACTTTTTTCCCCCTACTTCCTGGTAATACAAACTTTCCTTTTCATTCCGTCGGTGCTAGCATAGTATTGTCTTGTTAACTCTTTTTTAGCAATCTTATTAACTTTCATAATCTAAATTAATATACTTTGAATTTGTAGCATAGAAAATTTATAACAATATAGTGTCTTGTCTTCCCTTTTTTTGGTGGTGTATTGTCTTCCTTTAAATAAATAATGATATTTCTCTCTATCTATTTTTAGGAGAAAACAAAAATAGACCTTTGTCCTGATTTTGTGTGCATGCCAAACTTTTGTATAGTCGGTTTGTGTACAAAAATGAATATACAAAGCCTTTTAAATCTCAACTATTATTTTTTTTAATTAATCAAGAGGTATATGCACTTAAGCTTCTAAAATACAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCGATTCTCATTTGGTTGAATTTGGAAACTTTTCAGGTTGTGAACCATGGAGTGAGTGAATCAGTGCTAGAGGAAGCTTTATCTGTGGCATCCAAATTTTTTGATTTACCGACAAAAGAAAAAGTGAATTTGATGTCAAATGATGTTTACAAGCCAGTAAGATATTGCACAAGCATAAAAGATGGAGTTGATAAAGTTCAGTTTTGGAGGGTTTTTCTCAAACACTACGCTAACCCCTTAAAGGATTGGATTCACATGTGGCCAGAAAATCCATTTGATTACAGGTATTACATTCACTAAAAGGATTGCCTACTCTTACATGCATGTGTCTCGTATATATTATAAACCATTTTATTATATTTAAAAGGATAGCTCTTTTTTATTAATTTATATAGCACATGTGTATATTTTGCATTAAAGTAACTTTTATGTATTCCAGTTGAACAATGGAACTCTACTAGACTAGATTGCCCATATTACATTACTCTAATAAATATCTAAAAGTAATCGTATACCGTGACATCACTGCAATTCCATGTTATATATCATCATATCATATCCATAACCATATGTATGTCACGAGTTAGTTTTGTGGACTTCTAATATTTTCAAAGTATTTTACATTAACATTCAAGCATGTGTTATTAACATTTCAAAGTGTTGGACTTCTCAAACTGTTGTAATATTATAGTTAACTCTTATAAGATATAGGGTTAATTATGTTTTTGGCCCCTACAAAATTGCGATCTTGTAAGTTTAGTCCTTACTTAATTTTAATAGCATTTTTAATCCCTACAAAAAAAAATTTACTTATAATTTTAGTCCCTGCTAAAATAAATTTTGTTTAATTATCCTTAAACTCTTAAATTTTTTAATGATTCTTTTTATACAAGTTTAGAACACTATGAAAGGTTCATTTACTAAAATCTATAATTTTTTAACATGAAATAAATTAAATATGAATTTTTTAAAACGACAAAAGTTTAAGATATAAGTAACAAAAATATGGACGTAGAAATCAAATTTTTGCGAATTTTTTTCGGAGGACCTTTTAACAACGTTCTTAACACGCCTGTAAAAAATTGTTGAAAAACTTAAGAGTTTAAGCATAAATTAAACAAATTTGGATTGAGTAAGGACTAATATTGAGTGCTGAAATTTTTTGTAGGGATTAAAAATGGTATTAAAATTAAGTAAGGACTAAACTTACAAGGTCGCAATTTTGTAGGGACCAAAAACATAATTAACCCTAAGATATATACTATTTTAGTTTAAATAAGTAAATGGTCCCCCTAAATATATCAACATTTTATTTTAGTCCCTCTAAATATTTCCTATGCTTTTGGTCCCTCTAAAACTTTCCATCTATGAAATCAATTCATACTTTTTATTCAACTAATGTCCTTCATATTTTTCAATGAAATTTTCCAAAAAAAGGTAGAATATTATGACAATCTCTCCGAAATTTTTTATTTATTTTAACAAAACATGAATTAAATCTGAATTTTTATGTTTTTGATGCTAAAAAATTCATAATAAATTCATGTTATGTTAAAAAATTCTATTTTTTTTCTTTTGGAAAATATTGTCATAATTTTCTATCCATTTTTGGAAAATTTCATTAAAAATTTTGAAGGTTAGACATTATTTGACCAAAAAATGGGGAGTAATTTCATGAATGGAAAATTTTGGAGAGACCAAAAGCCTAAAGAAAATTTTGGAGGGACTAAAATCAAATGTTGGTATATTTAAGGGGACCATTTACTTATTTAACCCAAAAAAAAAAAAACTTTTGAATTAATTAAACAAAATCCTTCTAAATTTGCAGGGAAAAGATGGGAAGATATTGTCAAGAAGTGAAGAAAGTGGGCTTAGAGGTGATGTCAACAATAATTGAAAGTCTTGAAATAAATCCATCAAATCTAACAAAAAACCTTGAAAATGGAATGCAAGTGATTGCAGTGAATTGCTATCCACCTTGTCCACAACCAGATATTGCATTAGGCCTCCCACCACACTCTGACTACAGTTGCCTTACCATTCTATACCAAAGTTGTGAAGGCCTACAAATAATGGATTTTGAGGACAAAACTTGGAAAACAGTACCACACATTCCTGGTGCACTTCAAGTGCATCTAGGTGACCATTTTGAGGTATTAAGCAATGGTTTGTACAAGAGTGTTGTCCATAGGGCTACCCTTAATAAGGACAAAACAAGAATCTCTATTACTAGTTTATTCAGTTTGGGAATGGATGATAAAATGGAGACTGCTAAAGAGCTTGTGGATGATCAAAACCCTAAGAAATATAGGGAAAGCAGCTTTAGAGATTTTCTTGATTTTCTGGCTACCAATGATATTTCTGAAGGGAAGAGCTTCATTGATATCCTCAAGAACAATAACTACAACTAA
Protein sequence

>MS.gene068227.t1

MENGEDLSSFYTLDNAQEKSISHVPQNFVIPSMHRPNLESKYASLAVVDMAALKNGSTSRSRVIQEIRDSCRRLGFFQVVNHGVSESVLEEALSVASKFFDLPTKEKVNLMSNDVYKPVRYCTSIKDGVDKVQFWRVFLKHYANPLKDWIHMWPENPFDYREKMGRYCQEVKKVGLEVMSTIIESLEINPSNLTKNLENGMQVIAVNCYPPCPQPDIALGLPPHSDYSCLTILYQSCEGLQIMDFEDKTWKTVPHIPGALQVHLGDHFEVLSNGLYKSVVHRATLNKDKTRISITSLFSLGMDDKMETAKELVDDQNPKKYRESSFRDFLDFLATNDISEGKSFIDILKNNNYN