AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene029707

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029707.t1 MTR_1g062110 96.809 376 11 1 1 375 1 376 0.0 756
MS.gene029707.t1 MTR_1g062110 90.506 316 29 1 1 315 1 316 0.0 594
MS.gene029707.t1 MTR_7g102820 69.737 380 107 3 1 372 1 380 0.0 557
MS.gene029707.t1 MTR_7g081710 41.193 352 194 6 23 372 11 351 4.02e-94 285
MS.gene029707.t1 MTR_8g024120 44.201 319 168 3 34 352 15 323 1.26e-88 271
MS.gene029707.t1 MTR_1g048940 40.401 349 189 7 31 374 18 352 7.85e-87 267
MS.gene029707.t1 MTR_3g092890 39.940 333 185 5 37 368 15 333 5.97e-80 249
MS.gene029707.t1 MTR_5g065010 36.963 349 200 7 26 368 4 338 4.41e-79 246
MS.gene029707.t1 MTR_4g093840 39.706 340 187 8 43 372 35 366 2.81e-76 240
MS.gene029707.t1 MTR_7g068650 37.430 358 197 9 26 369 15 359 1.15e-72 231
MS.gene029707.t1 MTR_4g015790 36.842 361 204 8 26 369 14 367 7.41e-71 226
MS.gene029707.t1 MTR_5g048470 33.333 354 215 6 25 372 17 355 4.56e-67 216
MS.gene029707.t1 MTR_3g091350 37.224 317 177 7 32 341 30 331 1.14e-66 215
MS.gene029707.t1 MTR_8g064200 33.143 350 220 5 25 372 17 354 8.82e-66 213
MS.gene029707.t1 MTR_5g048740 34.000 350 215 7 26 372 11 347 1.29e-65 212
MS.gene029707.t1 MTR_8g064200 33.143 350 220 5 25 372 22 359 1.31e-65 213
MS.gene029707.t1 MTR_2g072890 34.670 349 205 8 31 372 23 355 1.79e-64 209
MS.gene029707.t1 MTR_3g091360 37.011 281 165 4 65 341 52 324 2.08e-64 209
MS.gene029707.t1 MTR_3g070860 35.393 356 206 9 26 371 15 356 2.99e-64 209
MS.gene029707.t1 MTR_2g072910 34.375 352 214 7 25 372 16 354 7.54e-64 208
MS.gene029707.t1 MTR_1g070120 34.694 343 203 6 26 359 1 331 1.33e-63 207
MS.gene029707.t1 MTR_0009s0480 34.181 354 208 8 26 372 12 347 1.33e-63 207
MS.gene029707.t1 MTR_7g062580 35.411 353 206 10 26 372 20 356 7.57e-63 205
MS.gene029707.t1 MTR_3g063180 33.799 358 215 8 26 374 10 354 1.23e-62 204
MS.gene029707.t1 MTR_5g055820 34.278 353 212 9 25 372 12 349 1.54e-62 204
MS.gene029707.t1 MTR_0328s0030 31.805 349 223 7 26 372 11 346 5.08e-62 203
MS.gene029707.t1 MTR_5g055680 33.889 360 204 11 26 379 13 344 1.04e-61 202
MS.gene029707.t1 MTR_1g070135 35.135 333 196 6 34 359 12 331 1.05e-61 202
MS.gene029707.t1 MTR_1g070080 33.233 331 207 5 26 353 1 320 2.62e-61 201
MS.gene029707.t1 MTR_5g032870 36.061 330 194 6 41 364 19 337 1.79e-60 199
MS.gene029707.t1 MTR_8g009160 33.708 356 210 9 25 372 27 364 5.76e-60 198
MS.gene029707.t1 MTR_5g082750 34.454 357 208 9 26 371 14 355 7.29e-60 197
MS.gene029707.t1 MTR_7g062570 33.051 354 217 9 26 374 20 358 1.26e-59 197
MS.gene029707.t1 MTR_2g069190 35.040 371 213 11 10 372 21 371 1.46e-59 197
MS.gene029707.t1 MTR_5g055900 31.250 352 223 8 25 372 12 348 3.28e-59 196
MS.gene029707.t1 MTR_8g075890 37.049 305 169 9 35 331 14 303 4.77e-59 196
MS.gene029707.t1 MTR_5g048850 32.565 347 215 8 26 368 13 344 7.61e-59 195
MS.gene029707.t1 MTR_5g055690 33.735 332 195 7 25 346 12 328 8.51e-59 194
MS.gene029707.t1 MTR_2g069020 35.652 345 196 7 25 359 30 358 1.40e-58 194
MS.gene029707.t1 MTR_5g048550 32.402 358 221 8 20 372 7 348 1.91e-58 194
MS.gene029707.t1 MTR_2g069210 35.493 355 207 8 25 372 28 367 2.41e-58 194
MS.gene029707.t1 MTR_2g069020 35.652 345 196 7 25 359 30 358 2.98e-58 194
MS.gene029707.t1 MTR_2g068840 33.432 338 202 6 24 353 20 342 3.06e-58 193
MS.gene029707.t1 MTR_1g070085 33.846 325 201 5 32 354 9 321 3.42e-58 192
MS.gene029707.t1 MTR_1g070085 33.846 325 201 5 32 354 9 321 3.42e-58 192
MS.gene029707.t1 MTR_2g437380 31.694 366 227 7 15 372 6 356 6.35e-58 192
MS.gene029707.t1 MTR_5g055800 31.519 349 223 8 26 372 13 347 1.14e-57 191
MS.gene029707.t1 MTR_2g068950 34.311 341 201 6 25 355 26 353 3.19e-57 191
MS.gene029707.t1 MTR_7g063730 34.169 319 194 8 64 377 63 370 3.75e-57 191
MS.gene029707.t1 MTR_7g062550 33.523 352 214 8 26 372 25 361 3.86e-57 191
MS.gene029707.t1 MTR_5g059130 34.049 326 190 9 36 353 19 327 4.09e-57 190
MS.gene029707.t1 MTR_2g068960 34.604 341 200 7 25 355 26 353 1.04e-56 189
MS.gene029707.t1 MTR_8g028435 33.894 357 208 9 25 372 27 364 1.37e-56 189
MS.gene029707.t1 MTR_7g062600 35.015 337 196 11 26 355 16 336 1.64e-56 189
MS.gene029707.t1 MTR_3g058610 36.093 302 161 8 51 331 13 303 3.09e-56 188
MS.gene029707.t1 MTR_5g032880 34.985 343 206 7 36 372 352 683 3.20e-56 195
MS.gene029707.t1 MTR_5g032880 35.276 326 190 7 41 362 19 327 3.21e-55 192
MS.gene029707.t1 MTR_5g011250 32.641 337 216 7 26 355 8 340 4.82e-56 187
MS.gene029707.t1 MTR_8g009090 32.493 357 213 9 25 372 27 364 1.16e-55 187
MS.gene029707.t1 MTR_5g048570 32.133 361 209 11 25 379 12 342 1.19e-55 186
MS.gene029707.t1 MTR_8g009170 33.038 339 202 9 25 355 27 348 1.20e-55 187
MS.gene029707.t1 MTR_7g105070 31.250 368 230 9 12 372 11 362 1.22e-55 187
MS.gene029707.t1 MTR_0032s0040 34.604 341 202 10 25 355 27 356 1.73e-55 187
MS.gene029707.t1 MTR_0009s0050 32.133 361 211 11 25 379 12 344 2.79e-55 186
MS.gene029707.t1 MTR_0009s0050 32.133 361 211 11 25 379 12 344 3.23e-55 185
MS.gene029707.t1 MTR_8g075830 35.974 303 175 8 35 331 14 303 3.28e-55 186
MS.gene029707.t1 MTR_5g022020 36.727 275 158 6 64 331 38 303 3.61e-55 185
MS.gene029707.t1 MTR_8g008930 32.682 358 212 10 25 372 27 365 4.24e-55 185
MS.gene029707.t1 MTR_8g041620 35.103 339 197 8 25 354 32 356 4.50e-55 186
MS.gene029707.t1 MTR_3g088565 36.972 284 160 5 63 340 1 271 5.32e-55 183
MS.gene029707.t1 MTR_2g069010 33.431 341 204 7 25 355 32 359 7.10e-55 185
MS.gene029707.t1 MTR_8g062600 32.312 359 215 9 25 372 32 373 8.53e-55 185
MS.gene029707.t1 MTR_2g069090 33.989 356 212 10 25 372 32 372 1.01e-54 184
MS.gene029707.t1 MTR_1g093120 33.613 357 216 9 24 372 27 370 2.21e-54 184
MS.gene029707.t1 MTR_3g072820 32.326 331 204 7 35 360 16 331 2.79e-54 182
MS.gene029707.t1 MTR_7g045650 34.069 317 185 10 26 336 25 323 3.78e-54 182
MS.gene029707.t1 MTR_3g043900 31.608 367 235 7 8 372 1 353 5.37e-54 182
MS.gene029707.t1 MTR_6g015950 32.641 337 209 6 36 369 15 336 5.69e-54 181
MS.gene029707.t1 MTR_8g074050 35.172 290 177 6 59 344 46 328 2.14e-53 181
MS.gene029707.t1 MTR_8g041600 31.944 360 222 8 25 375 32 377 2.92e-53 181
MS.gene029707.t1 MTR_4g117880 34.118 340 195 11 26 355 28 348 3.25e-53 180
MS.gene029707.t1 MTR_5g059140 33.546 313 187 6 36 341 17 315 4.02e-53 179
MS.gene029707.t1 MTR_3g045230 31.389 360 232 6 15 372 8 354 4.09e-53 180
MS.gene029707.t1 MTR_8g009110 31.742 356 218 8 25 372 27 365 4.27e-53 180
MS.gene029707.t1 MTR_7g029655 33.036 336 209 8 25 354 27 352 7.04e-53 180
MS.gene029707.t1 MTR_1g093110 32.743 339 210 8 25 355 29 357 9.53e-53 179
MS.gene029707.t1 MTR_1g032140 33.518 361 216 9 12 366 17 359 1.27e-52 179
MS.gene029707.t1 MTR_2g069060 35.922 309 177 7 50 352 37 330 1.80e-52 178
MS.gene029707.t1 MTR_3g117420 33.882 304 184 7 59 352 46 342 1.90e-52 178
MS.gene029707.t1 MTR_8g074070 36.519 293 169 7 59 344 46 328 2.40e-52 178
MS.gene029707.t1 MTR_1g033810 32.174 345 204 10 34 367 20 345 3.42e-52 177
MS.gene029707.t1 MTR_7g056347 31.183 372 226 10 11 372 22 373 5.98e-52 177
MS.gene029707.t1 MTR_2g069300 32.787 366 221 11 10 368 7 354 6.18e-52 177
MS.gene029707.t1 MTR_4g024660 30.337 356 226 7 25 372 32 373 1.21e-51 176
MS.gene029707.t1 MTR_1g093140 31.667 360 224 8 25 372 29 378 1.67e-51 176
MS.gene029707.t1 MTR_1g070185 30.790 367 219 7 1 354 5 349 8.41e-51 174
MS.gene029707.t1 MTR_8g009120 31.653 357 207 9 24 372 26 353 8.56e-50 171
MS.gene029707.t1 MTR_3g072810 32.335 334 201 9 26 352 6 321 1.31e-49 170
MS.gene029707.t1 MTR_7g016090 30.530 321 204 6 36 353 15 319 1.95e-49 169
MS.gene029707.t1 MTR_7g016090 30.530 321 204 6 36 353 17 321 2.00e-49 170
MS.gene029707.t1 MTR_1g043760 31.373 357 220 9 10 357 2 342 2.03e-49 170
MS.gene029707.t1 MTR_1g102070 32.530 332 195 7 37 355 38 353 2.60e-49 171
MS.gene029707.t1 MTR_1g032250 33.134 335 203 8 24 353 35 353 4.13e-49 170
MS.gene029707.t1 MTR_8g009080 31.161 353 219 9 9 355 46 380 5.72e-49 170
MS.gene029707.t1 MTR_1g070135 35.115 262 155 5 34 293 12 260 6.53e-49 167
MS.gene029707.t1 MTR_1g027290 33.140 344 201 10 45 373 10 339 1.64e-48 167
MS.gene029707.t1 MTR_1g032220 32.961 358 222 10 12 366 24 366 1.90e-48 168
MS.gene029707.t1 MTR_1g043770 31.622 370 229 10 9 372 4 355 2.34e-48 167
MS.gene029707.t1 MTR_7g016080 30.625 320 199 7 36 353 15 313 2.82e-48 166
MS.gene029707.t1 MTR_2g102570 30.836 347 220 6 32 377 23 350 5.91e-48 167
MS.gene029707.t1 MTR_6g464620 31.818 330 200 6 37 355 43 358 1.54e-47 166
MS.gene029707.t1 MTR_8g063070 31.471 340 209 9 25 355 32 356 1.72e-47 166
MS.gene029707.t1 MTR_1g043810 31.549 355 217 11 25 370 19 356 3.38e-47 164
MS.gene029707.t1 MTR_8g074070 35.836 293 152 8 59 344 46 309 3.63e-47 164
MS.gene029707.t1 MTR_7g078010 34.078 358 210 9 25 372 32 373 3.77e-47 165
MS.gene029707.t1 MTR_2g068800 34.021 291 152 6 24 307 20 277 4.76e-47 162
MS.gene029707.t1 MTR_1g034120 30.337 356 204 10 37 368 4 339 9.16e-47 163
MS.gene029707.t1 MTR_0009s0480 35.294 272 157 8 26 293 12 268 1.48e-46 160
MS.gene029707.t1 MTR_0056s0160 34.454 238 144 4 139 372 4 233 2.37e-46 159
MS.gene029707.t1 MTR_8g041600 33.942 274 162 6 25 293 32 291 2.45e-46 160
MS.gene029707.t1 MTR_4g087090 33.569 283 167 6 81 352 53 325 3.77e-46 161
MS.gene029707.t1 MTR_8g469400 30.704 355 213 9 25 372 32 360 3.90e-46 162
MS.gene029707.t1 MTR_3g117485 32.249 338 204 10 18 344 5 328 7.21e-46 160
MS.gene029707.t1 MTR_8g006930 33.056 360 211 10 25 372 32 373 1.03e-45 161
MS.gene029707.t1 MTR_1g081840 31.231 333 201 8 35 355 31 347 1.18e-45 161
MS.gene029707.t1 MTR_2g072910 35.145 276 162 7 25 296 16 278 1.46e-45 158
MS.gene029707.t1 MTR_1g034060 29.494 356 207 9 37 368 4 339 2.48e-45 159
MS.gene029707.t1 MTR_7g062560 31.629 313 190 9 64 372 61 353 3.01e-45 159
MS.gene029707.t1 MTR_4g116010 33.333 297 179 7 65 352 50 336 3.58e-45 159
MS.gene029707.t1 MTR_1g034140 34.242 330 183 11 64 377 26 337 4.39e-45 158
MS.gene029707.t1 MTR_1g043775 33.141 347 204 12 10 347 5 332 4.76e-45 159
MS.gene029707.t1 MTR_3g026150 30.199 351 227 9 26 372 24 360 7.13e-45 158
MS.gene029707.t1 MTR_4g087140 31.579 323 189 9 65 364 26 339 8.05e-45 158
MS.gene029707.t1 MTR_3g083370 34.397 282 164 7 65 340 4 270 3.74e-44 155
MS.gene029707.t1 MTR_5g048850 32.847 274 165 8 26 295 13 271 1.11e-43 153
MS.gene029707.t1 MTR_1g027310 30.699 329 178 7 50 373 34 317 1.33e-43 154
MS.gene029707.t1 MTR_4g087120 30.671 313 186 8 65 355 26 329 2.44e-43 154
MS.gene029707.t1 MTR_4g119410 31.806 371 225 9 11 372 22 373 4.42e-43 154
MS.gene029707.t1 MTR_4g087100 32.215 298 183 4 81 365 48 339 7.81e-43 152
MS.gene029707.t1 MTR_4g087110 31.045 335 194 9 65 377 26 345 9.13e-43 152
MS.gene029707.t1 MTR_3g096500 30.514 331 203 8 37 355 45 360 1.00e-42 153
MS.gene029707.t1 MTR_8g033380 29.830 352 214 8 37 376 33 363 2.91e-42 152
MS.gene029707.t1 MTR_2g025120 32.028 281 164 7 65 336 4 266 3.23e-42 150
MS.gene029707.t1 MTR_7g056393 31.933 357 219 8 25 372 32 373 8.60e-42 150
MS.gene029707.t1 MTR_2g069060 34.783 253 148 5 46 293 8 248 1.04e-41 147
MS.gene029707.t1 MTR_5g085330 31.597 288 176 6 63 344 3 275 2.92e-41 147
MS.gene029707.t1 MTR_5g055690 31.387 274 168 6 25 293 12 270 3.95e-41 146
MS.gene029707.t1 MTR_7g102720 30.000 310 204 4 65 372 37 335 5.17e-41 147
MS.gene029707.t1 MTR_8g009170 32.967 273 161 8 25 292 27 282 8.23e-41 146
MS.gene029707.t1 MTR_3g088745 32.229 332 195 11 37 355 16 330 9.41e-40 145
MS.gene029707.t1 MTR_1g070085 32.932 249 160 3 107 354 1 243 1.41e-39 142
MS.gene029707.t1 MTR_2g437380 31.365 271 172 5 107 372 1 262 2.53e-39 141
MS.gene029707.t1 MTR_1g070100 33.061 245 157 3 111 354 1 239 5.00e-39 140
MS.gene029707.t1 MTR_8g009150 29.326 341 194 10 24 355 26 328 1.29e-38 141
MS.gene029707.t1 MTR_0009s0050 32.453 265 151 8 121 379 4 246 8.78e-38 137
MS.gene029707.t1 MTR_0009s0050 32.830 265 150 8 121 379 4 246 1.15e-37 136
MS.gene029707.t1 MTR_3g117485 33.333 261 155 8 92 344 7 256 2.13e-36 134
MS.gene029707.t1 MTR_1g043770 32.404 287 173 9 9 292 4 272 2.24e-36 134
MS.gene029707.t1 MTR_0009s0400 41.958 143 82 1 231 372 2 144 5.50e-36 129
MS.gene029707.t1 MTR_1g043810 31.502 273 165 9 25 292 19 274 1.18e-35 133
MS.gene029707.t1 MTR_0009s0050 38.857 175 95 3 206 379 1 164 1.48e-35 128
MS.gene029707.t1 MTR_1g011580 30.530 321 201 8 34 347 27 332 7.95e-35 131
MS.gene029707.t1 MTR_8g093980 29.762 336 210 9 37 363 38 356 9.92e-35 132
MS.gene029707.t1 MTR_8g009080 31.250 288 180 8 24 307 57 330 1.03e-34 130
MS.gene029707.t1 MTR_4g074130 30.743 296 174 9 45 329 22 297 1.66e-34 130
MS.gene029707.t1 MTR_7g056353 29.885 348 195 9 15 355 25 330 2.26e-34 133
MS.gene029707.t1 MTR_4g087130 29.781 319 198 8 65 364 26 337 2.85e-34 130
MS.gene029707.t1 MTR_3g026150 29.889 271 175 7 26 293 24 282 3.61e-34 128
MS.gene029707.t1 MTR_7g078010 32.967 273 163 7 25 293 32 288 3.64e-34 128
MS.gene029707.t1 MTR_8g009080 31.599 269 167 7 24 289 57 311 3.83e-34 129
MS.gene029707.t1 MTR_1g043775 32.180 289 171 11 10 292 5 274 1.13e-33 127
MS.gene029707.t1 MTR_5g005570 31.329 316 188 10 44 344 8 309 2.07e-33 127
MS.gene029707.t1 MTR_3g026150 30.075 266 174 6 110 372 1 257 2.89e-33 125
MS.gene029707.t1 MTR_8g093930 27.619 315 207 6 59 364 41 343 3.50e-33 127
MS.gene029707.t1 MTR_7g451860 30.640 297 184 8 61 352 37 316 7.34e-33 125
MS.gene029707.t1 MTR_7g047670 30.640 297 184 8 61 352 37 316 7.34e-33 125
MS.gene029707.t1 MTR_2g033270 30.420 286 176 7 63 341 17 286 4.16e-32 123
MS.gene029707.t1 MTR_6g092620 29.252 294 184 7 63 349 1 277 7.11e-32 122
MS.gene029707.t1 MTR_3g040410 30.916 262 164 6 77 335 22 269 1.22e-31 122
MS.gene029707.t1 MTR_4g123020 29.293 297 170 10 65 344 20 293 1.51e-31 122
MS.gene029707.t1 MTR_2g083000 28.832 274 180 6 64 334 32 293 2.13e-31 121
MS.gene029707.t1 MTR_4g115990 28.931 318 188 8 52 362 33 319 2.14e-30 119
MS.gene029707.t1 MTR_1g070110 29.435 248 138 2 107 353 4 215 2.64e-30 116
MS.gene029707.t1 MTR_2g083030 28.819 288 185 8 64 344 36 310 3.66e-30 118
MS.gene029707.t1 MTR_2g019370 26.885 305 190 9 65 355 28 313 5.68e-30 118
MS.gene029707.t1 MTR_1g086550 30.000 300 176 9 65 344 20 305 7.00e-30 118
MS.gene029707.t1 MTR_8g461330 27.063 303 185 10 50 336 15 297 7.45e-30 117
MS.gene029707.t1 MTR_3g083370 32.627 236 136 8 65 293 4 223 1.10e-28 112
MS.gene029707.t1 MTR_8g009180 36.196 163 93 3 196 354 121 276 1.70e-28 113
MS.gene029707.t1 MTR_4g132770 45.714 105 56 1 233 336 32 136 1.77e-28 109
MS.gene029707.t1 MTR_2g025120 30.252 238 139 7 65 293 4 223 3.85e-28 110
MS.gene029707.t1 MTR_4g100600 29.530 298 183 9 62 344 6 291 1.24e-27 111
MS.gene029707.t1 MTR_2g070870 26.837 313 199 11 52 350 8 304 1.52e-27 111
MS.gene029707.t1 MTR_6g088665 29.739 306 180 6 64 344 17 312 7.64e-27 109
MS.gene029707.t1 MTR_6g088665 29.642 307 180 6 64 344 17 313 9.58e-27 109
MS.gene029707.t1 MTR_8g102600 27.815 302 183 7 67 344 11 301 1.96e-24 102
MS.gene029707.t1 MTR_4g011720 25.460 326 203 8 59 366 3 306 4.15e-24 101
MS.gene029707.t1 MTR_4g100590 25.597 293 196 6 62 344 6 286 1.44e-22 97.1
MS.gene029707.t1 MTR_4g011690 27.864 323 190 10 64 366 8 307 1.74e-22 97.1
MS.gene029707.t1 MTR_4g096840 25.321 312 196 9 65 355 29 324 2.79e-22 96.7
MS.gene029707.t1 MTR_3g464530 28.745 247 151 9 83 318 45 277 3.95e-22 96.3
MS.gene029707.t1 MTR_5g027230 26.846 298 191 9 83 372 21 299 2.33e-20 90.9
MS.gene029707.t1 MTR_2g068850 33.775 151 93 2 24 173 20 164 2.65e-20 89.0
MS.gene029707.t1 MTR_1g043840 29.952 207 127 4 164 359 31 230 2.83e-20 91.3
MS.gene029707.t1 MTR_8g030880 25.397 315 202 8 63 363 8 303 4.72e-20 90.1
MS.gene029707.t1 MTR_1g032240 45.977 87 38 1 225 311 56 133 1.78e-19 85.5
MS.gene029707.t1 MTR_5g025090 26.056 284 187 7 65 344 5 269 2.14e-18 85.1
MS.gene029707.t1 MTR_4g021380 23.988 321 208 12 64 364 6 310 3.03e-18 85.1
MS.gene029707.t1 MTR_3g108520 24.606 317 210 8 63 363 5 308 4.23e-18 84.7
MS.gene029707.t1 MTR_4g100600 30.698 215 128 7 63 267 7 210 1.61e-17 81.3
MS.gene029707.t1 MTR_7g077670 25.157 318 206 9 59 363 5 303 5.11e-17 81.6
MS.gene029707.t1 MTR_3g464530 27.027 222 137 9 83 293 45 252 1.38e-16 79.0
MS.gene029707.t1 MTR_4g021360 24.272 309 201 8 64 355 6 298 1.56e-16 80.1
MS.gene029707.t1 MTR_5g024940 25.436 287 179 5 85 369 23 276 1.13e-15 77.0
MS.gene029707.t1 MTR_7g056370 27.419 186 125 5 25 208 11 188 2.62e-15 74.7
MS.gene029707.t1 MTR_0009s0410 29.932 147 92 5 26 170 12 149 2.64e-15 73.6
MS.gene029707.t1 MTR_6g035160 30.822 146 99 2 215 358 20 165 3.19e-15 73.6
MS.gene029707.t1 MTR_4g094900 28.571 224 132 8 65 267 8 224 3.52e-15 75.1
MS.gene029707.t1 MTR_8g102600 32.292 192 117 7 162 344 64 251 5.23e-15 75.1
MS.gene029707.t1 MTR_4g100610 27.679 224 134 8 63 268 7 220 4.86e-14 71.2
MS.gene029707.t1 MTR_7g090520 25.237 317 196 14 65 362 10 304 8.88e-14 72.0
MS.gene029707.t1 MTR_3g040440 46.479 71 38 0 243 313 15 85 6.26e-13 68.6
MS.gene029707.t1 MTR_2g072930 27.211 147 100 3 25 170 16 156 1.12e-12 66.2
MS.gene029707.t1 MTR_1g011600 21.613 310 203 8 58 344 1 293 8.58e-12 65.9
MS.gene029707.t1 MTR_4g099380 28.966 145 92 5 25 166 137 273 9.13e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029707.t1 AT2G36690 61.804 377 131 4 1 375 1 366 2.75e-171 482
MS.gene029707.t1 AT2G36690 61.804 377 131 4 1 375 1 366 2.75e-171 482
MS.gene029707.t1 AT2G44800 41.954 348 190 5 29 374 19 356 7.49e-96 290
MS.gene029707.t1 AT3G60290 41.573 356 196 5 18 371 8 353 7.74e-96 290
MS.gene029707.t1 AT4G10500 44.118 306 153 3 37 338 20 311 1.19e-89 274
MS.gene029707.t1 AT4G10490 41.433 321 166 4 22 338 7 309 2.76e-87 268
MS.gene029707.t1 AT5G07480 38.348 339 185 7 34 363 21 344 3.06e-79 248
MS.gene029707.t1 AT5G24530 40.333 300 154 6 28 320 4 285 3.62e-74 234
MS.gene029707.t1 AT2G38240 36.389 360 198 9 26 373 12 352 8.68e-70 223
MS.gene029707.t1 AT3G11180 35.632 348 212 6 26 369 56 395 3.22e-67 218
MS.gene029707.t1 AT3G11180 35.043 351 212 7 26 368 56 398 6.67e-65 212
MS.gene029707.t1 AT1G55290 36.499 337 193 7 24 355 24 344 2.61e-63 206
MS.gene029707.t1 AT5G05600 35.792 366 219 8 10 369 11 366 3.20e-63 207
MS.gene029707.t1 AT3G13610 34.328 335 202 6 24 355 25 344 2.72e-61 201
MS.gene029707.t1 AT1G17010 33.523 352 219 9 26 372 17 358 4.45e-60 198
MS.gene029707.t1 AT3G12900 33.735 332 204 6 24 353 20 337 1.20e-59 197
MS.gene029707.t1 AT3G55970 33.711 353 221 8 26 371 14 360 1.35e-59 197
MS.gene029707.t1 AT1G17020 30.601 366 241 8 11 372 2 358 6.61e-57 190
MS.gene029707.t1 AT3G21420 33.426 359 220 8 23 372 14 362 1.77e-56 189
MS.gene029707.t1 AT4G16330 33.968 315 186 8 56 363 58 357 1.40e-55 186
MS.gene029707.t1 AT4G25300 33.239 352 219 10 26 372 16 356 4.18e-55 185
MS.gene029707.t1 AT3G51240 36.232 276 158 7 64 331 37 302 6.52e-55 185
MS.gene029707.t1 AT1G06620 33.824 340 201 8 24 355 25 348 9.53e-55 184
MS.gene029707.t1 AT5G59530 35.207 338 193 11 25 352 23 344 1.41e-54 184
MS.gene029707.t1 AT5G43450 33.333 369 228 9 5 367 1 357 2.66e-54 183
MS.gene029707.t1 AT5G07480 38.017 242 136 4 129 363 1 235 3.21e-54 179
MS.gene029707.t1 AT2G30840 33.333 357 209 10 9 355 8 345 4.62e-54 182
MS.gene029707.t1 AT4G25420 33.735 332 190 7 37 355 40 354 3.43e-53 181
MS.gene029707.t1 AT4G25310 34.576 295 178 7 82 372 70 353 3.92e-53 180
MS.gene029707.t1 AT2G30830 34.328 335 197 8 20 347 15 333 6.51e-53 179
MS.gene029707.t1 AT3G19010 34.174 357 198 11 41 377 8 347 8.26e-53 179
MS.gene029707.t1 AT3G19010 34.174 357 198 11 41 377 8 347 8.26e-53 179
MS.gene029707.t1 AT1G03410 34.218 339 199 10 24 352 18 342 1.76e-52 178
MS.gene029707.t1 AT1G77330 33.108 296 183 5 63 353 1 286 3.37e-52 176
MS.gene029707.t1 AT1G04350 34.911 338 194 11 24 352 20 340 3.42e-52 177
MS.gene029707.t1 AT1G03410 34.218 339 199 10 24 352 55 379 6.41e-52 178
MS.gene029707.t1 AT1G78550 31.085 341 221 7 31 368 23 352 1.87e-51 176
MS.gene029707.t1 AT5G43440 32.743 339 214 8 25 358 23 352 9.04e-51 174
MS.gene029707.t1 AT1G06650 32.240 366 209 11 9 358 13 355 9.25e-51 174
MS.gene029707.t1 AT1G03400 31.519 349 214 7 25 366 19 349 1.26e-50 173
MS.gene029707.t1 AT2G30840 33.053 357 204 11 9 355 8 339 2.15e-50 173
MS.gene029707.t1 AT5G59540 33.929 336 201 10 25 352 24 346 4.23e-50 172
MS.gene029707.t1 AT3G61400 30.079 379 240 9 1 367 1 366 1.05e-49 171
MS.gene029707.t1 AT5G08640 33.230 322 196 6 36 352 18 325 1.19e-49 170
MS.gene029707.t1 AT5G08640 33.230 322 196 6 36 352 18 325 1.19e-49 170
MS.gene029707.t1 AT1G06645 31.129 363 214 11 9 358 26 365 6.23e-49 169
MS.gene029707.t1 AT5G12270 33.766 385 212 13 5 372 1 359 6.49e-48 166
MS.gene029707.t1 AT4G22880 30.267 337 225 7 26 355 7 340 6.70e-48 166
MS.gene029707.t1 AT4G22880 30.267 337 225 7 26 355 7 340 6.70e-48 166
MS.gene029707.t1 AT4G22880 30.267 337 225 7 26 355 7 340 6.70e-48 166
MS.gene029707.t1 AT1G04380 34.395 314 185 9 37 346 23 319 4.36e-47 164
MS.gene029707.t1 AT4G16330 36.759 253 144 6 117 363 9 251 7.59e-47 160
MS.gene029707.t1 AT3G19000 30.233 344 211 7 41 366 8 340 2.05e-46 162
MS.gene029707.t1 AT1G06640 30.939 362 217 10 9 357 13 354 2.10e-46 162
MS.gene029707.t1 AT5G20550 31.437 334 211 9 18 344 1 323 3.40e-46 162
MS.gene029707.t1 AT3G19010 31.653 357 177 10 41 377 8 317 4.18e-46 160
MS.gene029707.t1 AT5G51810 32.317 328 196 7 37 355 42 352 4.40e-46 162
MS.gene029707.t1 AT5G05600 35.766 274 160 8 26 293 27 290 6.19e-46 159
MS.gene029707.t1 AT2G25450 31.378 341 211 8 25 357 20 345 5.17e-45 159
MS.gene029707.t1 AT5G54000 30.631 333 215 8 18 344 1 323 1.14e-44 157
MS.gene029707.t1 AT3G55970 34.545 275 167 8 26 293 14 282 1.17e-44 156
MS.gene029707.t1 AT1G03400 29.178 377 214 8 25 366 19 377 1.29e-44 158
MS.gene029707.t1 AT2G30840 34.828 290 165 8 9 292 8 279 1.54e-44 156
MS.gene029707.t1 AT1G06620 34.672 274 158 7 24 292 25 282 2.60e-44 155
MS.gene029707.t1 AT5G07200 29.240 342 214 7 28 355 28 355 5.59e-44 156
MS.gene029707.t1 AT1G60980 30.838 334 198 8 37 355 36 351 1.01e-43 155
MS.gene029707.t1 AT1G78550 31.769 277 180 5 94 368 5 274 1.62e-43 152
MS.gene029707.t1 AT1G49390 29.480 346 223 9 26 363 9 341 2.95e-43 154
MS.gene029707.t1 AT1G15550 28.824 340 230 6 34 371 27 356 1.01e-42 152
MS.gene029707.t1 AT3G51240 37.719 228 126 6 110 331 1 218 1.77e-42 150
MS.gene029707.t1 AT5G20400 30.341 323 212 7 26 344 9 322 1.82e-42 152
MS.gene029707.t1 AT5G43450 32.990 291 180 7 5 292 1 279 2.07e-42 150
MS.gene029707.t1 AT1G12010 31.228 285 175 7 60 338 2 271 1.05e-41 149
MS.gene029707.t1 AT5G43440 32.721 272 173 5 25 295 23 285 1.18e-41 148
MS.gene029707.t1 AT2G06960 46.108 167 71 3 196 362 1 148 1.75e-41 143
MS.gene029707.t1 AT5G63590 33.221 298 180 7 62 349 11 299 1.86e-40 145
MS.gene029707.t1 AT5G54000 33.068 251 156 5 98 344 1 243 2.71e-40 144
MS.gene029707.t1 AT1G62380 29.825 285 179 6 60 338 2 271 5.18e-40 144
MS.gene029707.t1 AT1G80340 30.000 310 198 6 65 368 50 346 2.20e-39 144
MS.gene029707.t1 AT1G05010 32.374 278 168 6 65 336 4 267 6.50e-39 142
MS.gene029707.t1 AT4G25420 33.459 266 147 7 37 289 40 288 1.09e-38 140
MS.gene029707.t1 AT5G59540 33.577 274 164 9 25 293 24 284 1.21e-38 140
MS.gene029707.t1 AT3G19010 34.672 274 143 10 41 294 8 265 1.81e-38 140
MS.gene029707.t1 AT4G21200 32.364 275 170 7 61 332 38 299 2.41e-38 140
MS.gene029707.t1 AT1G06650 32.534 292 170 8 9 292 13 285 2.45e-38 140
MS.gene029707.t1 AT2G19590 29.703 303 193 7 60 360 6 290 5.83e-38 139
MS.gene029707.t1 AT1G44090 30.503 318 194 8 37 343 43 344 1.10e-37 140
MS.gene029707.t1 AT3G61400 29.900 301 190 7 1 293 1 288 2.70e-37 136
MS.gene029707.t1 AT1G49390 30.882 272 172 6 98 363 1 262 2.71e-37 136
MS.gene029707.t1 AT5G43935 32.765 293 167 9 64 353 18 283 1.34e-36 135
MS.gene029707.t1 AT1G80330 28.701 331 213 10 34 353 16 334 1.45e-36 136
MS.gene029707.t1 AT4G25310 30.847 295 161 8 82 372 70 325 2.38e-36 135
MS.gene029707.t1 AT1G04380 32.308 260 158 7 37 295 23 265 2.45e-36 133
MS.gene029707.t1 AT4G25300 36.410 195 118 3 179 372 73 262 2.18e-35 130
MS.gene029707.t1 AT1G50960 31.900 279 173 7 45 318 20 286 2.97e-35 132
MS.gene029707.t1 AT3G19000 28.826 281 173 6 39 301 6 277 5.92e-35 130
MS.gene029707.t1 AT1G06640 30.743 296 184 7 9 299 13 292 1.10e-34 130
MS.gene029707.t1 AT3G49620 31.834 289 169 8 65 331 34 316 1.18e-34 131
MS.gene029707.t1 AT3G50210 32.550 298 160 12 65 331 8 295 1.56e-34 130
MS.gene029707.t1 AT3G50210 32.550 298 160 12 65 331 8 295 1.56e-34 130
MS.gene029707.t1 AT3G50210 32.550 298 160 12 65 331 8 295 1.56e-34 130
MS.gene029707.t1 AT1G06640 31.119 286 176 7 9 289 13 282 2.53e-34 128
MS.gene029707.t1 AT1G78440 27.891 294 185 7 65 346 18 296 3.15e-34 129
MS.gene029707.t1 AT5G51810 32.342 269 156 7 37 296 42 293 1.53e-33 127
MS.gene029707.t1 AT5G63595 30.830 253 146 5 65 316 25 249 2.41e-32 123
MS.gene029707.t1 AT3G49630 30.450 289 173 8 65 331 9 291 6.78e-32 123
MS.gene029707.t1 AT5G63600 27.815 302 191 7 51 344 19 301 1.08e-31 122
MS.gene029707.t1 AT4G21690 27.213 305 206 6 65 362 47 342 3.10e-31 122
MS.gene029707.t1 AT5G63600 27.090 299 198 7 51 344 19 302 3.80e-31 121
MS.gene029707.t1 AT3G49630 31.061 264 164 7 80 331 30 287 1.02e-30 120
MS.gene029707.t1 AT5G63580 33.190 232 142 5 65 293 19 240 4.73e-30 115
MS.gene029707.t1 AT5G63580 33.478 230 140 5 65 291 19 238 6.03e-30 115
MS.gene029707.t1 AT1G30040 25.392 319 212 9 65 372 31 334 1.38e-27 111
MS.gene029707.t1 AT3G46500 30.719 306 171 8 72 353 21 309 4.57e-27 110
MS.gene029707.t1 AT2G19590 29.078 282 173 8 81 360 19 275 1.42e-26 107
MS.gene029707.t1 AT2G34555 25.625 320 217 9 65 376 27 333 1.68e-25 105
MS.gene029707.t1 AT1G02400 25.559 313 205 11 45 344 4 301 6.18e-25 104
MS.gene029707.t1 AT3G46500 30.827 266 144 7 72 313 21 270 2.30e-23 99.4
MS.gene029707.t1 AT3G47190 25.524 286 185 6 44 315 8 279 3.66e-23 99.4
MS.gene029707.t1 AT1G47990 28.904 301 174 10 65 347 15 293 2.04e-22 97.1
MS.gene029707.t1 AT4G23340 26.582 316 198 10 62 363 7 302 1.07e-21 95.1
MS.gene029707.t1 AT1G14130 26.708 322 206 10 65 379 9 307 1.31e-21 94.4
MS.gene029707.t1 AT3G46490 28.041 296 175 7 85 354 34 317 1.67e-21 94.7
MS.gene029707.t1 AT1G35190 28.296 311 199 7 63 354 7 312 2.74e-21 94.0
MS.gene029707.t1 AT1G35190 28.477 302 169 8 72 354 16 289 4.26e-21 92.8
MS.gene029707.t1 AT1G52820 24.611 321 198 10 63 363 10 306 6.69e-21 92.8
MS.gene029707.t1 AT3G46490 29.054 296 162 8 72 337 21 298 9.64e-21 92.0
MS.gene029707.t1 AT5G58660 25.364 343 197 11 44 351 8 326 1.51e-20 92.0
MS.gene029707.t1 AT3G50210 32.738 168 102 5 170 331 51 213 3.75e-19 86.3
MS.gene029707.t1 AT1G28030 27.010 311 191 13 63 355 11 303 4.21e-19 87.4
MS.gene029707.t1 AT3G49630 32.927 164 102 4 170 331 61 218 2.78e-18 84.0
MS.gene029707.t1 AT1G14120 26.460 291 193 6 58 344 1 274 1.20e-17 83.2
MS.gene029707.t1 AT1G14120 26.460 291 193 6 58 344 1 274 1.20e-17 83.2
MS.gene029707.t1 AT1G14120 26.460 291 193 6 58 344 1 274 1.20e-17 83.2
MS.gene029707.t1 AT4G03070 25.776 322 204 12 55 358 2 306 1.27e-17 83.2
MS.gene029707.t1 AT1G30040 25.210 238 154 8 65 293 31 253 1.55e-17 82.0
MS.gene029707.t1 AT3G46500 40.517 116 63 2 244 354 60 174 1.93e-17 80.1
MS.gene029707.t1 AT3G46500 31.220 205 123 5 156 354 44 236 4.91e-17 80.5
MS.gene029707.t1 AT3G46500 31.220 205 123 5 156 354 44 236 4.91e-17 80.5
MS.gene029707.t1 AT3G46480 41.026 117 63 2 243 354 155 270 5.82e-15 75.1
MS.gene029707.t1 AT4G23340 28.261 138 95 2 227 360 44 181 1.16e-14 72.8
MS.gene029707.t1 AT4G22870 36.842 95 59 1 262 355 2 96 3.04e-14 68.9
MS.gene029707.t1 AT1G80320 24.534 322 200 11 65 365 9 308 5.68e-14 72.4
MS.gene029707.t1 AT4G16765 30.481 187 116 6 167 344 46 227 1.78e-13 69.7
MS.gene029707.t1 AT3G46500 32.484 157 89 4 163 313 51 196 1.99e-13 69.7
MS.gene029707.t1 AT3G46500 46.667 75 35 1 244 313 91 165 2.11e-13 68.9
MS.gene029707.t1 AT3G46500 46.667 75 35 1 244 313 91 165 2.11e-13 68.9
MS.gene029707.t1 AT4G03050 31.746 126 84 2 240 363 271 396 2.66e-13 71.2
MS.gene029707.t1 AT4G03050 31.746 126 84 2 240 363 271 396 2.66e-13 71.2
MS.gene029707.t1 AT4G16765 37.037 108 62 2 242 344 75 181 4.52e-13 68.2
MS.gene029707.t1 AT4G16765 29.947 187 117 6 167 344 46 227 8.75e-13 68.2
MS.gene029707.t1 AT4G16765 29.947 187 117 6 167 344 46 227 8.75e-13 68.2
MS.gene029707.t1 AT4G16765 29.947 187 117 6 167 344 46 227 8.75e-13 68.2
MS.gene029707.t1 AT1G52820 23.200 250 150 8 63 293 10 236 2.08e-12 67.0
MS.gene029707.t1 AT4G22870 35.227 88 56 1 269 355 50 137 2.96e-11 61.6

Find 87 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGGACTTGAGGCCTATT+TGG 0.218488 1.2:-47343570 None:intergenic
ACACTTATTTCTAAGGTTAA+TGG 0.222487 1.2:+47345976 MS.gene029707:CDS
ACAACGAATGCATTATTAAT+AGG 0.241440 1.2:-47346238 None:intergenic
AAACCAAACACTTATTTCTA+AGG 0.253076 1.2:+47345969 MS.gene029707:CDS
TGAACCATTGTTCTTGGAAT+TGG 0.275458 1.2:-47346207 None:intergenic
CTGATTTGATTGGTCCAAAT+AGG 0.288891 1.2:+47343556 MS.gene029707:CDS
ATCGGTGTCTGCGTAACGTT+TGG 0.310799 1.2:-47347443 None:intergenic
GAATCTTCAGTATTCTTAAC+AGG 0.331015 1.2:-47343489 None:intergenic
GGACAATATTATCAAAGAAT+TGG 0.341222 1.2:+47346048 MS.gene029707:CDS
GCTAATGCTTGTGAACGTTA+TGG 0.342922 1.2:+47343600 MS.gene029707:CDS
TCACTAAATATTGTCATTCC+AGG 0.352095 1.2:-47343351 None:intergenic
GAACCGTGAACCATTGTTCT+TGG 0.352914 1.2:-47346213 None:intergenic
CTTAAGTCCACGGGTGAATC+AGG 0.362636 1.2:-47344384 None:intergenic
ATAGATTTCTCTGATTTGAT+TGG 0.378631 1.2:+47343546 MS.gene029707:CDS
TACTTACCTCTTTCCTCAAA+TGG 0.387893 1.2:-47344231 None:intergenic
GGAAGATGGGAGCCAGCTTA+TGG 0.392686 1.2:+47346069 MS.gene029707:CDS
CTGATTCACCCGTGGACTTA+AGG 0.394075 1.2:+47344385 MS.gene029707:CDS
TATACCTAAACTCTCTACTA+TGG 0.399689 1.2:-47346002 None:intergenic
CTTCTCCAAGATGAGGTAGA+AGG 0.400521 1.2:+47346175 MS.gene029707:CDS
GGCCAATGGGGAAGATAATC+AGG 0.400544 1.2:-47344363 None:intergenic
GGTTTCGTTGGTTGAAATGT+AGG 0.408560 1.2:-47347482 None:intergenic
ATGAGAGCAGCAGTTCGATA+TGG 0.411261 1.2:+47344267 MS.gene029707:CDS
GTGAAGCAGCTAGTTGATAA+TGG 0.414485 1.2:+47343420 MS.gene029707:CDS
TAACCTTAGAAATAAGTGTT+TGG 0.414596 1.2:-47345972 None:intergenic
ACTCTTTCTCTTGGTTTCGT+TGG 0.418266 1.2:-47347494 None:intergenic
TCGGTGTCTGCGTAACGTTT+GGG 0.421674 1.2:-47347442 None:intergenic
GAAGCCATAGTAGAGAGTTT+AGG 0.422645 1.2:+47345998 MS.gene029707:CDS
GTCTGCGTAACGTTTGGGAT+TGG 0.431669 1.2:-47347437 None:intergenic
GGCAAGAAAAGTTTCAAAAT+CGG 0.432323 1.2:-47347461 None:intergenic
CTCGAGAAAACTCTTTCTCT+TGG 0.443477 1.2:-47347503 None:intergenic
CACGGGTGAATCAGGCCAAT+GGG 0.444035 1.2:-47344376 None:intergenic
TTAATTAAAATGTAGGAAAG+TGG 0.466796 1.2:+47345928 MS.gene029707:intron
ATTATCAAAGAATTGGAAGA+TGG 0.467688 1.2:+47346055 MS.gene029707:CDS
AAGCATTAGCTAATGATTGA+AGG 0.468086 1.2:-47343587 None:intergenic
TGCCTGATTATCTTCCCCAT+TGG 0.469148 1.2:+47344361 MS.gene029707:CDS
AATACAAGAGTGTGCTACAT+AGG 0.473985 1.2:+47347314 MS.gene029707:CDS
GCAAACCTTCTACCTCATCT+TGG 0.477634 1.2:-47346180 None:intergenic
TGAAGCCAACAAAGAAGAAA+AGG 0.484492 1.2:+47346027 MS.gene029707:CDS
GGCATCCCTAGGGTTAGGTC+AGG 0.492951 1.2:-47346121 None:intergenic
GATCTTCCATTTGAGGAAAG+AGG 0.501424 1.2:+47344225 MS.gene029707:CDS
TATTTAGTGAAGATATCAAA+GGG 0.504869 1.2:+47343364 MS.gene029707:CDS
AAATCAGAGAAATCTATGAT+TGG 0.515757 1.2:-47343540 None:intergenic
GTTAGGTCAGGTTGAGGACA+TGG 0.520576 1.2:-47346109 None:intergenic
ATAGAAAATCAATTTCTGAA+TGG 0.536962 1.2:+47343396 MS.gene029707:CDS
ATTCCAAGAACAATGGTTCA+CGG 0.541633 1.2:+47346210 MS.gene029707:CDS
TAACATCTTCTGAGATCCCA+TGG 0.547430 1.2:-47344167 None:intergenic
AGGAATCCATAGTCAGAATG+AGG 0.549394 1.2:-47346145 None:intergenic
AATCTATGATTGGTAGCTGT+AGG 0.551270 1.2:-47343530 None:intergenic
TTCTTAACAGGACGTTCAGA+AGG 0.564901 1.2:-47343477 None:intergenic
CCACGGGTGAATCAGGCCAA+TGG 0.566357 1.2:-47344377 None:intergenic
GTGTTTGGTTTCTTCTGCGT+AGG 0.567429 1.2:-47345957 None:intergenic
TTATCAAAGAATTGGAAGAT+GGG 0.570568 1.2:+47346056 MS.gene029707:CDS
TTGATAAAGGTGGTAAACCA+TGG 0.576959 1.2:+47344150 MS.gene029707:intron
AATGCATTCGTTGTCAATGT+TGG 0.578383 1.2:+47346247 MS.gene029707:CDS
ATACAAGAGTGTGCTACATA+GGG 0.579473 1.2:+47347315 MS.gene029707:CDS
CCTCAACCTGACCTAACCCT+AGG 0.580697 1.2:+47346115 MS.gene029707:CDS
GCTAATGATTGAAGGACTTG+AGG 0.581912 1.2:-47343579 None:intergenic
AAATACACACCTTAAGTCCA+CGG 0.583362 1.2:-47344394 None:intergenic
AGATGTTATCAACAACATGA+TGG 0.583825 1.2:+47344182 MS.gene029707:CDS
CCTAGGGTTAGGTCAGGTTG+AGG 0.589376 1.2:-47346115 None:intergenic
CTTCTACCTCATCTTGGAGA+AGG 0.590722 1.2:-47346174 None:intergenic
TGATAAAGGTGGTAAACCAT+GGG 0.593471 1.2:+47344151 MS.gene029707:intron
ATTAAAATGTAGGAAAGTGG+CGG 0.593821 1.2:+47345931 MS.gene029707:intron
GAAGATAATCAGGCAAAGGA+TGG 0.594394 1.2:-47344353 None:intergenic
TTAACAGGACGTTCAGAAGG+AGG 0.597751 1.2:-47343474 None:intergenic
CTCAACCTGACCTAACCCTA+GGG 0.597884 1.2:+47346116 MS.gene029707:CDS
AGTTGATAATGGACTTCGTA+CGG 0.603305 1.2:+47343431 MS.gene029707:CDS
AATGCTATGCAATGAAGCAA+TGG 0.614624 1.2:-47347368 None:intergenic
TTGGCTTTGTCAATGAGTGT+AGG 0.614803 1.2:-47347418 None:intergenic
AATACACACCTTAAGTCCAC+GGG 0.616230 1.2:-47344393 None:intergenic
ATATTGCATAACATGTCACC+TGG 0.616301 1.2:+47343333 None:intergenic
ATATTTAGTGAAGATATCAA+AGG 0.617640 1.2:+47343363 MS.gene029707:CDS
TGGGGAAGATAATCAGGCAA+AGG 0.620881 1.2:-47344357 None:intergenic
CCATTGGCCTGATTCACCCG+TGG 0.623004 1.2:+47344377 MS.gene029707:CDS
GGAATCCATAGTCAGAATGA+GGG 0.629331 1.2:-47346144 None:intergenic
AAGTCCAATTCCAAGAACAA+TGG 0.641965 1.2:+47346203 MS.gene029707:CDS
CATCTTGGAGAAGGAGTGTG+AGG 0.650271 1.2:-47346165 None:intergenic
AGATGGGAGCCAGCTTATGG+CGG 0.651529 1.2:+47346072 MS.gene029707:CDS
CACACTCCTTCTCCAAGATG+AGG 0.654262 1.2:+47346168 MS.gene029707:CDS
TTGTCAATGAGTGTAGGTGA+CGG 0.654799 1.2:-47347412 None:intergenic
CAATGTTGGTGATCACCTTG+AGG 0.661702 1.2:+47346261 MS.gene029707:CDS
GAATCCATAGTCAGAATGAG+GGG 0.688282 1.2:-47346143 None:intergenic
AACAACATGATGGATGTGTG+TGG 0.693738 1.2:+47344192 MS.gene029707:CDS
ACGGGTGAATCAGGCCAATG+GGG 0.696556 1.2:-47344375 None:intergenic
AATCCATAGTCAGAATGAGG+GGG 0.703984 1.2:-47346142 None:intergenic
AGGTCAGGTTGAGGACATGG+TGG 0.710387 1.2:-47346106 None:intergenic
ATTTAGTGAAGATATCAAAG+GGG 0.746024 1.2:+47343365 MS.gene029707:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATAAATTATATAATA+TGG + chr1.2:47346998-47347017 MS.gene029707:intron 0.0%
!! AATTGTATATATATACATTA+AGG - chr1.2:47344967-47344986 None:intergenic 10.0%
!! ATTGTATATATATACATTAA+GGG - chr1.2:47344966-47344985 None:intergenic 10.0%
!! CATTATATCAATAATAAATA+AGG + chr1.2:47345142-47345161 MS.gene029707:intron 10.0%
!! TATAACAAGATAAATTATAT+TGG - chr1.2:47346811-47346830 None:intergenic 10.0%
!! TGAAAAAAAATAAAATTGTA+CGG - chr1.2:47343826-47343845 None:intergenic 10.0%
!!! TAATATTTTGAACAATTATT+AGG - chr1.2:47344643-47344662 None:intergenic 10.0%
!!! TTGATTTTTAATTAAAATGT+AGG + chr1.2:47345921-47345940 MS.gene029707:intron 10.0%
!! AATGTAATATTTAAATGTGT+AGG - chr1.2:47347025-47347044 None:intergenic 15.0%
!! ATGTAATATTTAAATGTGTA+GGG - chr1.2:47347024-47347043 None:intergenic 15.0%
!!! ATGATATATGTAATCATTTT+TGG + chr1.2:47346664-47346683 MS.gene029707:intron 15.0%
!!! ATTTTCTTCTTTATTCTTTT+GGG + chr1.2:47346705-47346724 MS.gene029707:intron 15.0%
!!! GTGTATTATAATTTGTTTAA+GGG + chr1.2:47344579-47344598 MS.gene029707:intron 15.0%
!!! TATCTACTAATTAATTTGAT+AGG + chr1.2:47345668-47345687 MS.gene029707:intron 15.0%
!!! TGATATATGTAATCATTTTT+GGG + chr1.2:47346665-47346684 MS.gene029707:intron 15.0%
!!! TGTGTATTATAATTTGTTTA+AGG + chr1.2:47344578-47344597 MS.gene029707:intron 15.0%
!!! TTTTTAAAGATACAAATTAG+TGG + chr1.2:47345335-47345354 MS.gene029707:intron 15.0%
!! AATTAGTAGATATACTTACA+AGG - chr1.2:47345660-47345679 None:intergenic 20.0%
!! ATACTATATTGTAATTGTTG+AGG - chr1.2:47345888-47345907 None:intergenic 20.0%
!! ATAGAAAATCAATTTCTGAA+TGG + chr1.2:47343396-47343415 MS.gene029707:CDS 20.0%
!! ATATTTAGTGAAGATATCAA+AGG + chr1.2:47343363-47343382 MS.gene029707:CDS 20.0%
!! CAAAATTTAACCTAAAACAA+TGG + chr1.2:47345608-47345627 MS.gene029707:intron 20.0%
!! GTAATCAGATATCATATAAT+TGG + chr1.2:47346411-47346430 MS.gene029707:intron 20.0%
!! TACTTATAATTATGAAGAGA+AGG - chr1.2:47344767-47344786 None:intergenic 20.0%
!! TATTTAGTGAAGATATCAAA+GGG + chr1.2:47343364-47343383 MS.gene029707:CDS 20.0%
!! TCTCTATAAATAAATCGTTA+TGG - chr1.2:47346643-47346662 None:intergenic 20.0%
!! TCTCTTCATAATTATAAGTA+TGG + chr1.2:47344767-47344786 MS.gene029707:intron 20.0%
!! TCTTAAAAAATATGTGTAGA+TGG - chr1.2:47346928-47346947 None:intergenic 20.0%
!! TTAAACTTACAACTAACTAA+TGG - chr1.2:47346301-47346320 None:intergenic 20.0%
!! TTAATTAAAATGTAGGAAAG+TGG + chr1.2:47345928-47345947 MS.gene029707:intron 20.0%
!! TTAGTTAGTTGTAAGTTTAA+TGG + chr1.2:47346301-47346320 MS.gene029707:intron 20.0%
!! TTGATAGGAAACTAATTATA+TGG + chr1.2:47345683-47345702 MS.gene029707:intron 20.0%
!!! AAACAACACGTATTTTAAAA+CGG + chr1.2:47345231-47345250 MS.gene029707:intron 20.0%
!!! AAATGAGTTTTTTTAGTCAT+TGG - chr1.2:47343892-47343911 None:intergenic 20.0%
!!! AATGTTTTTTTGTCAATGAA+TGG + chr1.2:47345707-47345726 MS.gene029707:intron 20.0%
!!! AATTTGTAATTTGTCTGTAA+AGG + chr1.2:47343701-47343720 MS.gene029707:intron 20.0%
!!! ATATTGGTACAAACTTATTT+TGG - chr1.2:47346795-47346814 None:intergenic 20.0%
!!! ATGTTTTTTTGTCAATGAAT+GGG + chr1.2:47345708-47345727 MS.gene029707:intron 20.0%
!!! ATTTGTAATTTGTCTGTAAA+GGG + chr1.2:47343702-47343721 MS.gene029707:intron 20.0%
!!! CATTTTCTTCTTTATTCTTT+TGG + chr1.2:47346704-47346723 MS.gene029707:intron 20.0%
!!! TAGTCTTTATTTTGCATTTA+TGG + chr1.2:47343850-47343869 MS.gene029707:intron 20.0%
!!! TTAACTATAACTAAGTTTTG+TGG - chr1.2:47343648-47343667 None:intergenic 20.0%
!!! TTAGTTTTGTCTTAACTAAT+AGG + chr1.2:47346579-47346598 MS.gene029707:intron 20.0%
!!! TTTTGTGTTTTGATTGATAA+AGG + chr1.2:47344137-47344156 MS.gene029707:intron 20.0%
! AAAACTAAAGAATCTACCAT+TGG - chr1.2:47346567-47346586 None:intergenic 25.0%
! AAATCAGAGAAATCTATGAT+TGG - chr1.2:47343543-47343562 None:intergenic 25.0%
! AATCAACCAACTTTCTTAAT+TGG + chr1.2:47344684-47344703 MS.gene029707:intron 25.0%
! AATTATTTAGAGGACACAAT+TGG - chr1.2:47345102-47345121 None:intergenic 25.0%
! ACAACGAATGCATTATTAAT+AGG - chr1.2:47346241-47346260 None:intergenic 25.0%
! ATCTTACCATTGAGTTAAAA+TGG + chr1.2:47347106-47347125 MS.gene029707:intron 25.0%
! ATGAAATTCTGATATTCCAA+TGG + chr1.2:47346548-47346567 MS.gene029707:intron 25.0%
! ATTAGGTTATGTTTGGTAAA+AGG + chr1.2:47345363-47345382 MS.gene029707:intron 25.0%
! ATTATCAAAGAATTGGAAGA+TGG + chr1.2:47346055-47346074 MS.gene029707:CDS 25.0%
! ATTTAGTGAAGATATCAAAG+GGG + chr1.2:47343365-47343384 MS.gene029707:CDS 25.0%
! CATAAAACAATAAACTCTCA+TGG + chr1.2:47346470-47346489 MS.gene029707:intron 25.0%
! CATAATCATATAATAAGTCC+TGG + chr1.2:47344530-47344549 MS.gene029707:intron 25.0%
! CCCTCAAAAAAATGAATATA+GGG + chr1.2:47345737-47345756 MS.gene029707:intron 25.0%
! GAAGAATTAGCAACTTAAAT+AGG - chr1.2:47347258-47347277 None:intergenic 25.0%
! GGACAATATTATCAAAGAAT+TGG + chr1.2:47346048-47346067 MS.gene029707:CDS 25.0%
! TAACCTTAGAAATAAGTGTT+TGG - chr1.2:47345975-47345994 None:intergenic 25.0%
! TATTAGGTATCCATTTACAA+TGG - chr1.2:47344627-47344646 None:intergenic 25.0%
! TCCCTCAAAAAAATGAATAT+AGG + chr1.2:47345736-47345755 MS.gene029707:intron 25.0%
! TTATCAAAGAATTGGAAGAT+GGG + chr1.2:47346056-47346075 MS.gene029707:CDS 25.0%
! TTTGTACCAATTAAGAAAGT+TGG - chr1.2:47344693-47344712 None:intergenic 25.0%
!! ACAAATTAGTGGTCTTAATT+AGG + chr1.2:47345346-47345365 MS.gene029707:intron 25.0%
!! ATAGATTTCTCTGATTTGAT+TGG + chr1.2:47343546-47343565 MS.gene029707:CDS 25.0%
!! TATTTTCTTCTACTAACAGA+TGG - chr1.2:47345506-47345525 None:intergenic 25.0%
!! TGTGAAGTTTGAAATCTTAA+AGG + chr1.2:47345403-47345422 MS.gene029707:intron 25.0%
!!! AAACCAAACACTTATTTCTA+AGG + chr1.2:47345969-47345988 MS.gene029707:CDS 25.0%
!!! ACAATTTTTTTTTGCTAAGC+CGG - chr1.2:47343796-47343815 None:intergenic 25.0%
!!! ACACTTATTTCTAAGGTTAA+TGG + chr1.2:47345976-47345995 MS.gene029707:CDS 25.0%
!!! CCCTATATTCATTTTTTTGA+GGG - chr1.2:47345740-47345759 None:intergenic 25.0%
!!! TCCCTATATTCATTTTTTTG+AGG - chr1.2:47345741-47345760 None:intergenic 25.0%
!!! TGCAACATGCAATATTTTTA+GGG - chr1.2:47344014-47344033 None:intergenic 25.0%
!!! TGCTTTGTTGTTAGAAATTT+TGG - chr1.2:47347081-47347100 None:intergenic 25.0%
!!! TTTTTTTGATCTTCCATTTG+AGG + chr1.2:47344218-47344237 MS.gene029707:CDS 25.0%
AAATGTTAAAGAATGCCCAT+AGG - chr1.2:47344943-47344962 None:intergenic 30.0%
AACAAATGCAGCACTTATTA+AGG + chr1.2:47344797-47344816 MS.gene029707:intron 30.0%
AAGCATTAGCTAATGATTGA+AGG - chr1.2:47343590-47343609 None:intergenic 30.0%
AGATGTTATCAACAACATGA+TGG + chr1.2:47344182-47344201 MS.gene029707:CDS 30.0%
ATATCATCACTAGTACGTAA+TGG + chr1.2:47345559-47345578 MS.gene029707:intron 30.0%
ATTAAAATGTAGGAAAGTGG+CGG + chr1.2:47345931-47345950 MS.gene029707:intron 30.0%
CTCTTCAATAAATTAGTACC+AGG - chr1.2:47344551-47344570 None:intergenic 30.0%
GAATCTTCAGTATTCTTAAC+AGG - chr1.2:47343492-47343511 None:intergenic 30.0%
GGCAAGAAAAGTTTCAAAAT+CGG - chr1.2:47347464-47347483 None:intergenic 30.0%
GGTCTTAATTAGGTTATGTT+TGG + chr1.2:47345356-47345375 MS.gene029707:intron 30.0%
TAATCAATTCAATCTCTACG+TGG + chr1.2:47344447-47344466 MS.gene029707:intron 30.0%
TATACCTAAACTCTCTACTA+TGG - chr1.2:47346005-47346024 None:intergenic 30.0%
TCACTAAATATTGTCATTCC+AGG - chr1.2:47343354-47343373 None:intergenic 30.0%
TTGGTACAAATTTGTCAATG+AGG + chr1.2:47344703-47344722 MS.gene029707:intron 30.0%
! AGTGTCACTCAATTATTTAG+AGG - chr1.2:47345112-47345131 None:intergenic 30.0%
! ATTGTCCTTTTCTTCTTTGT+TGG - chr1.2:47346035-47346054 None:intergenic 30.0%
! GTGCAACATGCAATATTTTT+AGG - chr1.2:47344015-47344034 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr1.2:47345011-47345030 None:intergenic 30.0%
!! CAAAAGACAAAGTGTTTTGT+TGG + chr1.2:47344307-47344326 MS.gene029707:CDS 30.0%
!!! CAATTTTTTTTTGCTAAGCC+GGG - chr1.2:47343795-47343814 None:intergenic 30.0%
!!! TCATTTTTGGGACAACTTTT+AGG + chr1.2:47346677-47346696 MS.gene029707:intron 30.0%
!!! TGTGTTTTGATTGATAAAGG+TGG + chr1.2:47344140-47344159 MS.gene029707:intron 30.0%
AAAACACTAGAGAGAGAAAG+AGG + chr1.2:47346730-47346749 MS.gene029707:intron 35.0%
AAACACTAGAGAGAGAAAGA+GGG + chr1.2:47346731-47346750 MS.gene029707:intron 35.0%
AAATACACACCTTAAGTCCA+CGG - chr1.2:47344397-47344416 None:intergenic 35.0%
AAGTCCAATTCCAAGAACAA+TGG + chr1.2:47346203-47346222 MS.gene029707:CDS 35.0%
AATGCATTCGTTGTCAATGT+TGG + chr1.2:47346247-47346266 MS.gene029707:CDS 35.0%
AATGCTATGCAATGAAGCAA+TGG - chr1.2:47347371-47347390 None:intergenic 35.0%
ACCATTGAGTTAAAATGGCA+TGG + chr1.2:47347111-47347130 MS.gene029707:intron 35.0%
ATTCCAAGAACAATGGTTCA+CGG + chr1.2:47346210-47346229 MS.gene029707:CDS 35.0%
GATAGTTGGTCCATTGTAAA+TGG + chr1.2:47344614-47344633 MS.gene029707:intron 35.0%
TACTTACCTCTTTCCTCAAA+TGG - chr1.2:47344234-47344253 None:intergenic 35.0%
TGAACCATTGTTCTTGGAAT+TGG - chr1.2:47346210-47346229 None:intergenic 35.0%
TGAAGCCAACAAAGAAGAAA+AGG + chr1.2:47346027-47346046 MS.gene029707:CDS 35.0%
TGATAAAGGTGGTAAACCAT+GGG + chr1.2:47344151-47344170 MS.gene029707:intron 35.0%
TGTTTAAGGGACAAGTTCTA+CGG + chr1.2:47344592-47344611 MS.gene029707:intron 35.0%
TTGATAAAGGTGGTAAACCA+TGG + chr1.2:47344150-47344169 MS.gene029707:intron 35.0%
! AATACAAGAGTGTGCTACAT+AGG + chr1.2:47347314-47347333 MS.gene029707:CDS 35.0%
! AATCTATGATTGGTAGCTGT+AGG - chr1.2:47343533-47343552 None:intergenic 35.0%
! ATACAAGAGTGTGCTACATA+GGG + chr1.2:47347315-47347334 MS.gene029707:CDS 35.0%
! CTGATTTGATTGGTCCAAAT+AGG + chr1.2:47343556-47343575 MS.gene029707:CDS 35.0%
! TGAACGTTATGGATTTTTCC+AGG + chr1.2:47343611-47343630 MS.gene029707:CDS 35.0%
!! ACCTAAAACAATGGTTTTGC+TGG + chr1.2:47345617-47345636 MS.gene029707:intron 35.0%
!! AGTTGATAATGGACTTCGTA+CGG + chr1.2:47343431-47343450 MS.gene029707:CDS 35.0%
!!! CTTCTCAGATTTTTAGCAAC+GGG + chr1.2:47347290-47347309 MS.gene029707:intron 35.0%
!!! GCTTCTCAGATTTTTAGCAA+CGG + chr1.2:47347289-47347308 MS.gene029707:intron 35.0%
!!! GGAGGAAGTATGTACTTTTT+TGG - chr1.2:47343459-47343478 None:intergenic 35.0%
!!! TCCATGCCATTTTAACTCAA+TGG - chr1.2:47347115-47347134 None:intergenic 35.0%
AAAAATTTGCCGCCATAAGC+TGG - chr1.2:47346084-47346103 None:intergenic 40.0%
AAAGAATGCCCATAGGACAT+TGG - chr1.2:47344936-47344955 None:intergenic 40.0%
AATACACACCTTAAGTCCAC+GGG - chr1.2:47344396-47344415 None:intergenic 40.0%
AATCCATAGTCAGAATGAGG+GGG - chr1.2:47346145-47346164 None:intergenic 40.0%
ACTCTTTCTCTTGGTTTCGT+TGG - chr1.2:47347497-47347516 None:intergenic 40.0%
AGGAATCCATAGTCAGAATG+AGG - chr1.2:47346148-47346167 None:intergenic 40.0%
ATCATTGTCACAGATGTGCT+TGG - chr1.2:47345452-47345471 None:intergenic 40.0%
CCTCTTAACCAATGTCCTAT+GGG + chr1.2:47344925-47344944 MS.gene029707:intron 40.0%
CTCGAGAAAACTCTTTCTCT+TGG - chr1.2:47347506-47347525 None:intergenic 40.0%
GAAGATAATCAGGCAAAGGA+TGG - chr1.2:47344356-47344375 None:intergenic 40.0%
GAAGCCATAGTAGAGAGTTT+AGG + chr1.2:47345998-47346017 MS.gene029707:CDS 40.0%
GAATATCCATCCATACCTCA+AGG - chr1.2:47346279-47346298 None:intergenic 40.0%
GAATCCATAGTCAGAATGAG+GGG - chr1.2:47346146-47346165 None:intergenic 40.0%
GATCTTCCATTTGAGGAAAG+AGG + chr1.2:47344225-47344244 MS.gene029707:CDS 40.0%
GCTAATGATTGAAGGACTTG+AGG - chr1.2:47343582-47343601 None:intergenic 40.0%
GCTAATGCTTGTGAACGTTA+TGG + chr1.2:47343600-47343619 MS.gene029707:CDS 40.0%
GGAATCCATAGTCAGAATGA+GGG - chr1.2:47346147-47346166 None:intergenic 40.0%
GGTCACTAATTGTAGATGAC+AGG - chr1.2:47346622-47346641 None:intergenic 40.0%
TTCTTAACAGGACGTTCAGA+AGG - chr1.2:47343480-47343499 None:intergenic 40.0%
TTGTCAATGAGTGTAGGTGA+CGG - chr1.2:47347415-47347434 None:intergenic 40.0%
! CCATAGGACATTGGTTAAGA+GGG - chr1.2:47344927-47344946 None:intergenic 40.0%
! GAAAGAGTTTTCTCGAGTCT+AGG + chr1.2:47347509-47347528 MS.gene029707:CDS 40.0%
! GCCAGCAAAACCATTGTTTT+AGG - chr1.2:47345621-47345640 None:intergenic 40.0%
! GGTTTCGTTGGTTGAAATGT+AGG - chr1.2:47347485-47347504 None:intergenic 40.0%
! GTAAAGGGTATGAGTGTCTT+CGG + chr1.2:47343717-47343736 MS.gene029707:intron 40.0%
! GTCAATGAGGTCTTATACCT+GGG + chr1.2:47344716-47344735 MS.gene029707:intron 40.0%
! TAAAGGGTATGAGTGTCTTC+GGG + chr1.2:47343718-47343737 MS.gene029707:intron 40.0%
! TGTCAATGAGGTCTTATACC+TGG + chr1.2:47344715-47344734 MS.gene029707:intron 40.0%
! TTGATACCTGTCATTTCTCC+CGG + chr1.2:47343774-47343793 MS.gene029707:intron 40.0%
!! AACAACATGATGGATGTGTG+TGG + chr1.2:47344192-47344211 MS.gene029707:CDS 40.0%
!! GTGAAGCAGCTAGTTGATAA+TGG + chr1.2:47343420-47343439 MS.gene029707:CDS 40.0%
!! TAACATCTTCTGAGATCCCA+TGG - chr1.2:47344170-47344189 None:intergenic 40.0%
!! TTGGCTTTGTCAATGAGTGT+AGG - chr1.2:47347421-47347440 None:intergenic 40.0%
!!! TGGTAGCTGTAGGTTTTGTT+TGG - chr1.2:47343523-47343542 None:intergenic 40.0%
ACAAGGCCGTATGAATCATC+AGG - chr1.2:47345643-47345662 None:intergenic 45.0%
ACCACTACTTTCCATTTCCC+AGG - chr1.2:47344736-47344755 None:intergenic 45.0%
ACCTGGGAAATGGAAAGTAG+TGG + chr1.2:47344732-47344751 MS.gene029707:intron 45.0%
ATGAGAGCAGCAGTTCGATA+TGG + chr1.2:47344267-47344286 MS.gene029707:CDS 45.0%
CCCTCTTAACCAATGTCCTA+TGG + chr1.2:47344924-47344943 MS.gene029707:intron 45.0%
CTTCTACCTCATCTTGGAGA+AGG - chr1.2:47346177-47346196 None:intergenic 45.0%
CTTCTCCAAGATGAGGTAGA+AGG + chr1.2:47346175-47346194 MS.gene029707:CDS 45.0%
GAACCGTGAACCATTGTTCT+TGG - chr1.2:47346216-47346235 None:intergenic 45.0%
GCAAACCTTCTACCTCATCT+TGG - chr1.2:47346183-47346202 None:intergenic 45.0%
GGACAAGTTCTACGGATAGT+TGG + chr1.2:47344600-47344619 MS.gene029707:intron 45.0%
GGGAGAAATGACAGGTATCA+AGG - chr1.2:47343775-47343794 None:intergenic 45.0%
TCCCAACAAAGTTGCAACGA+GGG + chr1.2:47345827-47345846 MS.gene029707:intron 45.0%
TGAAGGACTTGAGGCCTATT+TGG - chr1.2:47343573-47343592 None:intergenic 45.0%
TGATCACCTTGAGGTATGGA+TGG + chr1.2:47346270-47346289 MS.gene029707:intron 45.0%
TGCCTGATTATCTTCCCCAT+TGG + chr1.2:47344361-47344380 MS.gene029707:CDS 45.0%
TGGGGAAGATAATCAGGCAA+AGG - chr1.2:47344360-47344379 None:intergenic 45.0%
TGTCAACCTAGTTGGGATGT+CGG + chr1.2:47343742-47343761 MS.gene029707:intron 45.0%
TTAACAGGACGTTCAGAAGG+AGG - chr1.2:47343477-47343496 None:intergenic 45.0%
TTCCCAACAAAGTTGCAACG+AGG + chr1.2:47345826-47345845 MS.gene029707:intron 45.0%
TTTGTGGTTGATTGCTCACC+TGG - chr1.2:47343632-47343651 None:intergenic 45.0%
! AAAGGGTATGAGTGTCTTCG+GGG + chr1.2:47343719-47343738 MS.gene029707:intron 45.0%
! CCCATAGGACATTGGTTAAG+AGG - chr1.2:47344928-47344947 None:intergenic 45.0%
! GAGGTCTTATACCTGGGAAA+TGG + chr1.2:47344722-47344741 MS.gene029707:intron 45.0%
! GTGTTTGGTTTCTTCTGCGT+AGG - chr1.2:47345960-47345979 None:intergenic 45.0%
! TGCTGGCCTGATGATTCATA+CGG + chr1.2:47345634-47345653 MS.gene029707:intron 45.0%
! TTGGTGATCACCTTGAGGTA+TGG + chr1.2:47346266-47346285 MS.gene029707:intron 45.0%
!! CAATGTTGGTGATCACCTTG+AGG + chr1.2:47346261-47346280 MS.gene029707:CDS 45.0%
!! TGTATAAATTAATAAAAATA+TGG + chr1.2:47343914-47343933 MS.gene029707:intron 5.0%
!! TTTATTTCATATAAAATTTA+TGG - chr1.2:47346966-47346985 None:intergenic 5.0%
!!! AAATTAAATAAATTTTTTGT+AGG + chr1.2:47343941-47343960 MS.gene029707:intron 5.0%
!!! AATTAAATAAATTTTTTGTA+GGG + chr1.2:47343942-47343961 MS.gene029707:intron 5.0%
!!! ATTATTTATATTTTTATGAT+AGG - chr1.2:47346898-47346917 None:intergenic 5.0%
!!! TAAAAACATATATTTTTTTA+AGG - chr1.2:47343672-47343691 None:intergenic 5.0%
ATGCCCCCTCATTCTGACTA+TGG + chr1.2:47346139-47346158 MS.gene029707:CDS 50.0%
CACACTCCTTCTCCAAGATG+AGG + chr1.2:47346168-47346187 MS.gene029707:CDS 50.0%
CTCAACCTGACCTAACCCTA+GGG + chr1.2:47346116-47346135 MS.gene029707:CDS 50.0%
CTGATTCACCCGTGGACTTA+AGG + chr1.2:47344385-47344404 MS.gene029707:CDS 50.0%
CTTAAGTCCACGGGTGAATC+AGG - chr1.2:47344387-47344406 None:intergenic 50.0%
GCCCTCGTTGCAACTTTGTT+GGG - chr1.2:47345831-47345850 None:intergenic 50.0%
GGCCAATGGGGAAGATAATC+AGG - chr1.2:47344366-47344385 None:intergenic 50.0%
TGCCCTCGTTGCAACTTTGT+TGG - chr1.2:47345832-47345851 None:intergenic 50.0%
! ATCGGTGTCTGCGTAACGTT+TGG - chr1.2:47347446-47347465 None:intergenic 50.0%
! CATCTTGGAGAAGGAGTGTG+AGG - chr1.2:47346168-47346187 None:intergenic 50.0%
! GTCTGCGTAACGTTTGGGAT+TGG - chr1.2:47347440-47347459 None:intergenic 50.0%
! TCGGTGTCTGCGTAACGTTT+GGG - chr1.2:47347445-47347464 None:intergenic 50.0%
! TTCGGGGTGTCAACCTAGTT+GGG + chr1.2:47343735-47343754 MS.gene029707:intron 50.0%
!! GTTAGGTCAGGTTGAGGACA+TGG - chr1.2:47346112-47346131 None:intergenic 50.0%
ACGGGTGAATCAGGCCAATG+GGG - chr1.2:47344378-47344397 None:intergenic 55.0%
AGATGGGAGCCAGCTTATGG+CGG + chr1.2:47346072-47346091 MS.gene029707:CDS 55.0%
CACGGGTGAATCAGGCCAAT+GGG - chr1.2:47344379-47344398 None:intergenic 55.0%
CCTCAACCTGACCTAACCCT+AGG + chr1.2:47346115-47346134 MS.gene029707:CDS 55.0%
GCTAAGCCGGGAGAAATGAC+AGG - chr1.2:47343783-47343802 None:intergenic 55.0%
GGAAGATGGGAGCCAGCTTA+TGG + chr1.2:47346069-47346088 MS.gene029707:CDS 55.0%
! CCTAGGGTTAGGTCAGGTTG+AGG - chr1.2:47346118-47346137 None:intergenic 55.0%
! CTTCGGGGTGTCAACCTAGT+TGG + chr1.2:47343734-47343753 MS.gene029707:intron 55.0%
!! AGAATGAGGGGGCATCCCTA+GGG - chr1.2:47346134-47346153 None:intergenic 55.0%
!! AGGTCAGGTTGAGGACATGG+TGG - chr1.2:47346109-47346128 None:intergenic 55.0%
CCACGGGTGAATCAGGCCAA+TGG - chr1.2:47344380-47344399 None:intergenic 60.0%
GAGTCGCCGACATCCCAACT+AGG - chr1.2:47343751-47343770 None:intergenic 60.0%
GGCATCCCTAGGGTTAGGTC+AGG - chr1.2:47346124-47346143 None:intergenic 60.0%
! CCATTGGCCTGATTCACCCG+TGG + chr1.2:47344377-47344396 MS.gene029707:CDS 60.0%
!! CAGAATGAGGGGGCATCCCT+AGG - chr1.2:47346135-47346154 None:intergenic 60.0%
!! GAGGGGGCATCCCTAGGGTT+AGG - chr1.2:47346129-47346148 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 47343345 47347561 47343345 ID=MS.gene029707
chr1.2 mRNA 47343345 47347561 47343345 ID=MS.gene029707.t1;Parent=MS.gene029707
chr1.2 exon 47343345 47343632 47343345 ID=MS.gene029707.t1.exon1;Parent=MS.gene029707.t1
chr1.2 CDS 47343345 47343632 47343345 ID=cds.MS.gene029707.t1;Parent=MS.gene029707.t1
chr1.2 exon 47344159 47344406 47344159 ID=MS.gene029707.t1.exon2;Parent=MS.gene029707.t1
chr1.2 CDS 47344159 47344406 47344159 ID=cds.MS.gene029707.t1;Parent=MS.gene029707.t1
chr1.2 exon 47345943 47346282 47345943 ID=MS.gene029707.t1.exon3;Parent=MS.gene029707.t1
chr1.2 CDS 47345943 47346282 47345943 ID=cds.MS.gene029707.t1;Parent=MS.gene029707.t1
chr1.2 exon 47347298 47347561 47347298 ID=MS.gene029707.t1.exon4;Parent=MS.gene029707.t1
chr1.2 CDS 47347298 47347561 47347298 ID=cds.MS.gene029707.t1;Parent=MS.gene029707.t1
Gene Sequence

>MS.gene029707

ATGTCACCTGGAATGACAATATTTAGTGAAGATATCAAAGGGGTCGATGATATAGAAAATCAATTTCTGAATGGAGTGAAGCAGCTAGTTGATAATGGACTTCGTACGGTACCAAAAAAGTACATACTTCCTCCTTCTGAACGTCCTGTTAAGAATACTGAAGATTCAAATTTTGCCAAACAAAACCTACAGCTACCAATCATAGATTTCTCTGATTTGATTGGTCCAAATAGGCCTCAAGTCCTTCAATCATTAGCTAATGCTTGTGAACGTTATGGATTTTTCCAGGTGAGCAATCAACCACAAAACTTAGTTATAGTTAAACCTTAAAAAAATATATGTTTTTAATTCTTTTAAATTTGTAATTTGTCTGTAAAGGGTATGAGTGTCTTCGGGGTGTCAACCTAGTTGGGATGTCGGCGACTCTCCTTGATACCTGTCATTTCTCCCGGCTTAGCAAAAAAAAATTGTAATTTGTCCGTACAATTTTATTTTTTTTCAGTTTTAGTCTTTATTTTGCATTTATGGAATTAAATGCAAGAAGCCAATGACTAAAAAAACTCATTTTTTGTATAAATTAATAAAAATATGGATTAAAATTAAATAAATTTTTTGTAGGGATTAAATTTAAAAATTTGTAATCTTATAGAGACTAAATATATTTTACCCTAAAAATATTGCATGTTGCACTATAAAATGCAATTAGAAACGTCTATAAACACTTCAGTTTGTATAATTCAGCTTACTTTATTAAAAAAAGAGTTGACTTTATAAATATTGATTGAAAGTATCTTTTGTGTTTTGATTGATAAAGGTGGTAAACCATGGGATCTCAGAAGATGTTATCAACAACATGATGGATGTGTGTGGAAATTTTTTTGATCTTCCATTTGAGGAAAGAGGTAAGTACATGACATCTGATATGAGAGCAGCAGTTCGATATGGAACTAGCTTTAGTCAAACAAAAGACAAAGTGTTTTGTTGGAGAGATTTCTTGAAACTTATCTGCCATCCTTTGCCTGATTATCTTCCCCATTGGCCTGATTCACCCGTGGACTTAAGGTGTGTATTTTAATTTGTATAACTATATATAATTAATCATTAATCAATTCAATCTCTACGTGGACAACATTTTTTAAAGTATAGTTTTTTTTTTGACAAACTTTTTTAAAGTATAGTTATAATCATAATCATATAATAAGTCCTGGTACTAATTTATTGAAGAGACAAATTTGTGTATTATAATTTGTTTAAGGGACAAGTTCTACGGATAGTTGGTCCATTGTAAATGGATACCTAATAATTGTTCAAAATATTAACAAATAAATGTCACAAACTAAATCAACCAACTTTCTTAATTGGTACAAATTTGTCAATGAGGTCTTATACCTGGGAAATGGAAAGTAGTGGTAATATACTCCTTCTCTTCATAATTATAAGTATGGAAATGCTAACAAATGCAGCACTTATTAAGGAAACAAAAAATAGTAATTTTATATTGAATTCAACAATTTTTTAACTTTTAAAAAATCAAATCTATCATTTTTCACTATTTCTCAATACAACATTTCTATTTTTTCCCTCTTAACCAATGTCCTATGGGCATTCTTTAACATTTCCCTTAATGTATATATATACAATTTGTGTAAAATTATTACTCTCTCCGTTTCAAAATGAGTGTCGTTTTAGCAAAAAAAAATTGTTTTAAAATGAATGTCACTTGCACTTTTCAATGCAGAATTATTATTTAACTTCCAATTGTGTCCTCTAAATAATTGAGTGACACTACTTCTAAAGCATTATATCAATAATAAATAAGGTTAGTTTAGTAAAATTGTCATGTTTTACATAATTATCACATTTTTTAATTTGTGTATAAAAACTTTAAACAACACGTATTTTAAAACGGATTGAGTACTAAATTGTTTTTTGTGTATAGATATATTCAATATAGATTTTTTTTTTATATTCAACAACAAATTAGTATATTTTTTTAAAGATACAAATTAGTGGTCTTAATTAGGTTATGTTTGGTAAAAGGAAATTAGCAGTCTTATTTGTGAAGTTTGAAATCTTAAAGGTTTTACATCTTTAATATGATTTTCCAAGCACATCTGTGACAATGATTTATGAGTTAAGTATGATCTTGTAGAGTTTTCCATCTGTTAGTAGAAGAAAATATTGTATATATGCATGTTAAAAAATATTGTTGATATATCATCACTAGTACGTAATGGTATATACATTTATATCAATTTGTAAACAAAATTTAACCTAAAACAATGGTTTTGCTGGCCTGATGATTCATACGGCCTTGTAAGTATATCTACTAATTAATTTGATAGGAAACTAATTATATGGCAATGTTTTTTTGTCAATGAATGGGACGATTCCCTCAAAAAAATGAATATAGGGACGATGAATACTCTATTTTATATTTTTAGTCTATATTTTTCTTTTCTCTTTTCTATATCTCTCTGTTTCCCAACAAAGTTGCAACGAGGGCATGATGACATGACACATTTATCTTTTATTTTTCTCCTCAACAATTACAATATAGTATGTTTGTCTTATTCTTGATTTTTAATTAAAATGTAGGAAAGTGGCGGCTACCTACGCAGAAGAAACCAAACACTTATTTCTAAGGTTAATGGAAGCCATAGTAGAGAGTTTAGGTATAGTTGAAGCCAACAAAGAAGAAAAGGACAATATTATCAAAGAATTGGAAGATGGGAGCCAGCTTATGGCGGCAAATTTTTATCCACCATGTCCTCAACCTGACCTAACCCTAGGGATGCCCCCTCATTCTGACTATGGATTCCTCACACTCCTTCTCCAAGATGAGGTAGAAGGTTTGCAAGTCCAATTCCAAGAACAATGGTTCACGGTTCAACCTATTAATAATGCATTCGTTGTCAATGTTGGTGATCACCTTGAGGTATGGATGGATATTCCATTAGTTAGTTGTAAGTTTAATGGAACAATTTAAATAAGTTTTTATGTATATTTTAAATTATACTATGTCACTATATCGTTTTATATTGCTAAATTATTATCATATTTATAGTAATCAGATATCATATAATTGGTTAAAAAAATAATCAGATATCATATAATTAAATCAACATAAAACAATAAACTCTCATGGCAATTTAAGATGACAGAGAATTCATGAAGTATTAATGAAAATGATATTTCAAATTATGAAATTCTGATATTCCAATGGTAGATTCTTTAGTTTTGTCTTAACTAATAGGTTGAAGAGAATTTTGTTCCTGTCATCTACAATTAGTGACCATAACGATTTATTTATAGAGAAATGATATATGTAATCATTTTTGGGACAACTTTTAGGACAACATTTTCTTCTTTATTCTTTTGGGACAAAACACTAGAGAGAGAAAGAGGGAGAGTAAACATGATGAGAGTATAAAAGAGAGAGTTTTTCCAAAATAAGTTTGTACCAATATAATTTATCTTGTTATATATGAGTCATATATCATATCACGAAGAGACATAACTATCAAATTTTTATCATTTTCTATTTCTACCTATCATAAAAATATAAATAATATTTATGCCATCTACACATATTTTTTAAGATAATTATATTTTTCACCATAAATTTTATATGAAATAAATCATTTTAATTTAATTAATAAATTATATAATATGGCCCTACACATTTAAATATTACATTTTTTTTAAAGAACATTTAAATATTACATGTGTTCCAAAATTTCTAACAACAAAGCAAACTTATCTTACCATTGAGTTAAAATGGCATGGAAGAGTATTTATTGATCGAACAACAAATAAAATTTATAAATACAAAATTAAGTGTGAACTGTGAAGAGAAATTATTTAAATTTCATTTTGACGTATGTGTCAAAAAGTCATGTTGATATATCCTATTTAAGTTGCTAATTCTTCTTTGTATCTGTGCTTCTCAGATTTTTAGCAACGGGAAATACAAGAGTGTGCTACATAGGGTTCTAGTGAATTCAAGTAAGCGTAGAAGATCCATTGCTTCATTGCATAGCATTTCGTTCAACAGTACTGTGAGACCGTCACCTACACTCATTGACAAAGCCAATCCCAAACGTTACGCAGACACCGATTTTGAAACTTTTCTTGCCTACATTTCAACCAACGAAACCAAGAGAAAGAGTTTTCTCGAGTCTAGGAAATTGACTTCTATCTCAGTACTTGACTAA
Protein sequence

>MS.gene029707.t1

MSPGMTIFSEDIKGVDDIENQFLNGVKQLVDNGLRTVPKKYILPPSERPVKNTEDSNFAKQNLQLPIIDFSDLIGPNRPQVLQSLANACERYGFFQVVNHGISEDVINNMMDVCGNFFDLPFEERGKYMTSDMRAAVRYGTSFSQTKDKVFCWRDFLKLICHPLPDYLPHWPDSPVDLRKVAATYAEETKHLFLRLMEAIVESLGIVEANKEEKDNIIKELEDGSQLMAANFYPPCPQPDLTLGMPPHSDYGFLTLLLQDEVEGLQVQFQEQWFTVQPINNAFVVNVGDHLEIFSNGKYKSVLHRVLVNSSKRRRSIASLHSISFNSTVRPSPTLIDKANPKRYADTDFETFLAYISTNETKRKSFLESRKLTSISVLD