AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47397

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47397.t1 MTR_1g062110 95.745 376 15 1 1 375 1 376 0.0 748
MS.gene47397.t1 MTR_1g062110 89.557 316 32 1 1 315 1 316 0.0 587
MS.gene47397.t1 MTR_7g102820 69.737 380 107 3 1 372 1 380 0.0 558
MS.gene47397.t1 MTR_7g081710 40.625 352 196 5 23 372 11 351 8.77e-94 285
MS.gene47397.t1 MTR_8g024120 43.887 319 169 3 34 352 15 323 3.44e-88 270
MS.gene47397.t1 MTR_1g048940 40.816 343 184 7 37 374 24 352 1.24e-85 264
MS.gene47397.t1 MTR_3g092890 38.953 344 193 6 28 368 4 333 9.00e-80 248
MS.gene47397.t1 MTR_5g065010 36.676 349 201 7 26 368 4 338 1.71e-77 243
MS.gene47397.t1 MTR_4g093840 39.412 340 188 8 43 372 35 366 4.93e-75 237
MS.gene47397.t1 MTR_7g068650 37.151 358 198 9 26 369 15 359 1.79e-70 225
MS.gene47397.t1 MTR_4g015790 36.288 361 206 8 26 369 14 367 7.88e-69 221
MS.gene47397.t1 MTR_3g091350 39.085 284 155 6 65 341 59 331 6.87e-66 213
MS.gene47397.t1 MTR_5g048470 33.714 350 219 6 25 372 17 355 1.05e-65 213
MS.gene47397.t1 MTR_5g048740 33.429 350 217 7 26 372 11 347 2.62e-64 209
MS.gene47397.t1 MTR_8g064200 32.670 352 219 6 25 372 17 354 4.58e-64 208
MS.gene47397.t1 MTR_8g064200 32.670 352 219 6 25 372 22 359 4.67e-64 208
MS.gene47397.t1 MTR_1g070120 34.627 335 201 5 26 355 1 322 7.93e-64 207
MS.gene47397.t1 MTR_3g091360 36.655 281 166 4 65 341 52 324 1.73e-63 207
MS.gene47397.t1 MTR_0009s0480 33.425 365 218 8 15 372 1 347 3.53e-63 206
MS.gene47397.t1 MTR_7g062580 35.311 354 207 10 25 372 19 356 6.66e-63 206
MS.gene47397.t1 MTR_3g063180 33.799 358 215 8 26 374 10 354 3.89e-62 203
MS.gene47397.t1 MTR_2g072890 34.097 349 207 8 31 372 23 355 7.77e-62 202
MS.gene47397.t1 MTR_3g070860 35.112 356 207 9 26 371 15 356 8.64e-62 202
MS.gene47397.t1 MTR_2g072910 33.243 367 227 8 10 372 2 354 1.25e-61 202
MS.gene47397.t1 MTR_5g055820 33.711 353 214 9 25 372 12 349 3.08e-61 201
MS.gene47397.t1 MTR_1g070135 35.202 321 193 5 37 355 15 322 3.93e-61 200
MS.gene47397.t1 MTR_0328s0030 32.194 351 221 9 25 372 10 346 7.42e-61 200
MS.gene47397.t1 MTR_5g055680 34.097 349 196 11 37 379 24 344 2.91e-60 198
MS.gene47397.t1 MTR_1g070080 32.931 331 208 5 26 353 1 320 4.03e-60 197
MS.gene47397.t1 MTR_2g069020 34.759 374 209 9 5 359 1 358 1.98e-59 197
MS.gene47397.t1 MTR_5g032870 35.455 330 196 6 41 364 19 337 3.44e-59 195
MS.gene47397.t1 MTR_7g062570 32.768 354 218 9 26 374 20 358 4.96e-59 195
MS.gene47397.t1 MTR_2g069020 34.759 374 209 9 5 359 1 358 6.18e-59 196
MS.gene47397.t1 MTR_8g009160 33.427 356 211 9 25 372 27 364 8.44e-59 195
MS.gene47397.t1 MTR_8g075890 39.130 276 150 7 64 331 38 303 1.01e-58 195
MS.gene47397.t1 MTR_2g069190 35.933 359 200 13 25 372 32 371 1.21e-58 195
MS.gene47397.t1 MTR_5g082750 34.174 357 209 9 26 371 14 355 2.18e-58 194
MS.gene47397.t1 MTR_5g055690 34.177 316 189 6 64 372 46 349 7.97e-58 192
MS.gene47397.t1 MTR_2g068840 32.312 359 220 6 24 374 20 363 1.93e-57 191
MS.gene47397.t1 MTR_5g048550 31.653 357 225 7 20 372 7 348 2.22e-57 191
MS.gene47397.t1 MTR_5g059130 33.846 325 190 9 37 353 20 327 3.07e-57 190
MS.gene47397.t1 MTR_2g069210 35.493 355 207 9 25 372 28 367 3.23e-57 191
MS.gene47397.t1 MTR_5g055900 30.966 352 224 8 25 372 12 348 3.30e-57 191
MS.gene47397.t1 MTR_5g048850 32.277 347 216 8 26 368 13 344 5.06e-57 190
MS.gene47397.t1 MTR_7g063730 34.169 319 194 8 64 377 63 370 5.50e-57 190
MS.gene47397.t1 MTR_2g437380 31.421 366 228 7 15 372 6 356 1.13e-56 189
MS.gene47397.t1 MTR_3g058610 36.424 302 160 8 51 331 13 303 1.39e-56 189
MS.gene47397.t1 MTR_5g011250 32.440 336 218 5 26 355 8 340 1.48e-56 189
MS.gene47397.t1 MTR_2g068950 34.018 341 202 6 25 355 26 353 2.07e-56 189
MS.gene47397.t1 MTR_1g070085 33.538 325 202 5 32 354 9 321 2.13e-56 188
MS.gene47397.t1 MTR_1g070085 33.538 325 202 5 32 354 9 321 2.13e-56 188
MS.gene47397.t1 MTR_7g062550 33.239 352 215 8 26 372 25 361 2.18e-56 189
MS.gene47397.t1 MTR_7g062600 35.015 337 196 11 26 355 16 336 2.57e-56 188
MS.gene47397.t1 MTR_5g055800 30.966 352 221 9 26 372 13 347 2.72e-56 188
MS.gene47397.t1 MTR_8g028435 33.894 357 208 9 25 372 27 364 4.12e-56 188
MS.gene47397.t1 MTR_5g022020 37.091 275 157 6 64 331 38 303 8.23e-56 187
MS.gene47397.t1 MTR_2g068960 34.018 341 202 6 25 355 26 353 1.97e-55 186
MS.gene47397.t1 MTR_5g032880 35.000 340 204 7 39 372 355 683 3.70e-55 192
MS.gene47397.t1 MTR_5g032880 34.663 326 192 7 41 362 19 327 1.50e-53 188
MS.gene47397.t1 MTR_8g075830 36.700 297 169 8 41 331 20 303 7.68e-55 184
MS.gene47397.t1 MTR_8g062600 32.591 359 214 9 25 372 32 373 8.35e-55 185
MS.gene47397.t1 MTR_8g009090 32.493 357 213 9 25 372 27 364 9.66e-55 184
MS.gene47397.t1 MTR_1g093110 33.333 339 208 8 25 355 29 357 1.53e-54 184
MS.gene47397.t1 MTR_8g041620 34.897 341 199 8 25 356 32 358 1.84e-54 184
MS.gene47397.t1 MTR_5g048570 31.579 361 211 10 25 379 12 342 1.93e-54 183
MS.gene47397.t1 MTR_1g093120 33.613 357 216 9 24 372 27 370 2.33e-54 184
MS.gene47397.t1 MTR_3g088565 36.620 284 161 5 63 340 1 271 3.66e-54 181
MS.gene47397.t1 MTR_2g069090 34.270 356 211 12 25 372 32 372 3.67e-54 183
MS.gene47397.t1 MTR_8g008930 32.682 358 212 10 25 372 27 365 3.89e-54 183
MS.gene47397.t1 MTR_8g009170 32.743 339 203 9 25 355 27 348 4.12e-54 183
MS.gene47397.t1 MTR_2g069010 33.138 341 205 7 25 355 32 359 6.78e-54 182
MS.gene47397.t1 MTR_0032s0040 34.018 341 204 10 25 355 27 356 1.23e-53 182
MS.gene47397.t1 MTR_0009s0050 31.856 361 212 11 25 379 12 344 1.25e-53 181
MS.gene47397.t1 MTR_0009s0050 31.856 361 212 11 25 379 12 344 1.43e-53 181
MS.gene47397.t1 MTR_3g072820 32.087 321 199 6 37 352 18 324 1.89e-53 180
MS.gene47397.t1 MTR_6g015950 32.440 336 209 6 37 369 16 336 2.24e-53 180
MS.gene47397.t1 MTR_5g059140 33.333 312 187 6 37 341 18 315 2.36e-53 180
MS.gene47397.t1 MTR_7g105070 30.791 354 225 7 25 372 23 362 2.37e-53 181
MS.gene47397.t1 MTR_8g041600 32.222 360 221 8 25 375 32 377 3.04e-53 181
MS.gene47397.t1 MTR_7g045650 33.754 317 186 10 26 336 25 323 3.18e-53 179
MS.gene47397.t1 MTR_3g117420 33.882 304 184 7 59 352 46 342 8.86e-53 179
MS.gene47397.t1 MTR_8g074050 34.828 290 178 6 59 344 46 328 1.10e-52 179
MS.gene47397.t1 MTR_4g024660 30.618 356 225 7 25 372 32 373 1.89e-52 179
MS.gene47397.t1 MTR_1g093140 31.944 360 223 8 25 372 29 378 3.02e-52 178
MS.gene47397.t1 MTR_7g029655 33.036 336 209 8 25 354 27 352 3.44e-52 178
MS.gene47397.t1 MTR_4g117880 34.639 332 188 11 26 347 28 340 4.26e-52 177
MS.gene47397.t1 MTR_8g009110 31.461 356 219 8 25 372 27 365 4.87e-52 177
MS.gene47397.t1 MTR_2g069060 35.294 306 180 6 53 352 37 330 6.04e-52 177
MS.gene47397.t1 MTR_3g045230 31.063 367 224 7 15 372 8 354 6.22e-52 177
MS.gene47397.t1 MTR_3g043900 31.016 374 228 8 8 372 1 353 9.17e-52 176
MS.gene47397.t1 MTR_8g074070 35.152 330 189 9 25 344 14 328 9.21e-52 176
MS.gene47397.t1 MTR_2g069300 33.431 341 206 10 25 358 18 344 6.14e-51 174
MS.gene47397.t1 MTR_1g032140 33.333 348 209 8 25 366 29 359 6.42e-51 174
MS.gene47397.t1 MTR_1g033810 31.884 345 205 10 34 367 20 345 7.91e-51 174
MS.gene47397.t1 MTR_1g070185 30.973 339 205 5 24 354 32 349 2.44e-49 170
MS.gene47397.t1 MTR_7g056347 31.564 358 219 9 25 372 32 373 3.89e-49 170
MS.gene47397.t1 MTR_8g009120 31.373 357 208 9 24 372 26 353 5.97e-49 169
MS.gene47397.t1 MTR_8g063070 31.765 340 208 8 25 355 32 356 1.38e-48 168
MS.gene47397.t1 MTR_7g016090 31.034 319 203 6 37 353 18 321 1.88e-48 167
MS.gene47397.t1 MTR_8g009080 32.047 337 209 8 24 354 57 379 2.10e-48 169
MS.gene47397.t1 MTR_7g016090 31.034 319 203 6 37 353 16 319 2.12e-48 167
MS.gene47397.t1 MTR_7g078010 34.358 358 209 9 25 372 32 373 4.42e-48 167
MS.gene47397.t1 MTR_3g072810 32.036 334 202 9 26 352 6 321 4.76e-48 166
MS.gene47397.t1 MTR_1g043760 31.412 347 216 7 25 365 19 349 5.23e-48 166
MS.gene47397.t1 MTR_2g102570 30.836 347 220 6 32 377 23 350 5.55e-48 167
MS.gene47397.t1 MTR_1g070135 35.135 259 153 5 37 293 15 260 8.69e-48 164
MS.gene47397.t1 MTR_1g102070 32.424 330 194 7 37 353 38 351 1.42e-47 166
MS.gene47397.t1 MTR_1g032250 32.081 346 214 8 24 364 35 364 1.73e-47 166
MS.gene47397.t1 MTR_7g016080 30.124 322 202 7 37 356 16 316 2.51e-47 164
MS.gene47397.t1 MTR_8g469400 30.986 355 212 9 25 372 32 360 4.53e-47 164
MS.gene47397.t1 MTR_1g032220 32.659 346 216 9 24 366 35 366 5.73e-47 164
MS.gene47397.t1 MTR_1g043770 32.464 345 209 10 9 347 4 330 6.74e-47 164
MS.gene47397.t1 MTR_1g034120 30.056 356 205 10 37 368 4 339 1.19e-46 163
MS.gene47397.t1 MTR_0056s0160 34.454 238 144 4 139 372 4 233 1.58e-46 159
MS.gene47397.t1 MTR_1g043810 31.672 341 208 10 25 357 19 342 2.29e-46 162
MS.gene47397.t1 MTR_1g027290 32.558 344 203 10 45 373 10 339 2.66e-46 161
MS.gene47397.t1 MTR_8g074070 35.495 293 153 8 59 344 46 309 3.25e-46 161
MS.gene47397.t1 MTR_6g464620 32.087 321 193 6 37 346 43 349 4.89e-46 162
MS.gene47397.t1 MTR_3g026150 30.114 352 226 9 26 372 24 360 5.58e-46 161
MS.gene47397.t1 MTR_0009s0480 34.266 286 163 8 15 293 1 268 6.87e-46 158
MS.gene47397.t1 MTR_2g068800 33.677 291 153 6 24 307 20 277 8.57e-46 159
MS.gene47397.t1 MTR_4g087090 33.216 283 168 6 81 352 53 325 1.02e-45 160
MS.gene47397.t1 MTR_8g006930 33.333 360 210 10 25 372 32 373 1.03e-45 161
MS.gene47397.t1 MTR_7g062560 31.949 313 189 9 64 372 61 353 1.42e-45 160
MS.gene47397.t1 MTR_1g043775 32.749 342 203 11 25 357 19 342 1.60e-45 160
MS.gene47397.t1 MTR_8g041600 33.942 274 162 6 25 293 32 291 1.60e-45 159
MS.gene47397.t1 MTR_4g116010 33.333 297 179 7 65 352 50 336 1.61e-45 160
MS.gene47397.t1 MTR_1g034060 29.213 356 208 9 37 368 4 339 4.66e-45 159
MS.gene47397.t1 MTR_4g087140 31.579 323 189 9 65 364 26 339 5.63e-45 158
MS.gene47397.t1 MTR_3g117485 31.250 352 216 11 18 357 5 342 5.70e-45 158
MS.gene47397.t1 MTR_1g034140 33.434 332 192 11 64 379 26 344 1.27e-44 157
MS.gene47397.t1 MTR_1g081840 31.343 335 203 9 59 374 47 373 1.37e-44 158
MS.gene47397.t1 MTR_4g087120 30.671 313 186 8 65 355 26 329 1.75e-43 154
MS.gene47397.t1 MTR_3g083370 33.559 295 174 8 65 353 4 282 3.78e-43 152
MS.gene47397.t1 MTR_2g072910 33.677 291 175 8 10 296 2 278 5.83e-43 151
MS.gene47397.t1 MTR_4g119410 32.213 357 218 8 25 372 32 373 8.26e-43 153
MS.gene47397.t1 MTR_4g087100 31.879 298 184 4 81 365 48 339 1.51e-42 152
MS.gene47397.t1 MTR_2g069060 34.783 253 148 5 46 293 8 248 3.12e-42 148
MS.gene47397.t1 MTR_3g096500 30.337 356 216 10 29 368 38 377 3.75e-42 152
MS.gene47397.t1 MTR_4g087110 30.448 335 196 8 65 377 26 345 3.86e-42 151
MS.gene47397.t1 MTR_5g048850 32.482 274 166 8 26 295 13 271 7.30e-42 148
MS.gene47397.t1 MTR_1g027310 30.435 322 174 7 57 373 41 317 1.90e-41 148
MS.gene47397.t1 MTR_7g102720 30.000 310 204 4 65 372 37 335 3.48e-41 148
MS.gene47397.t1 MTR_2g025120 31.673 281 165 7 65 336 4 266 3.52e-41 147
MS.gene47397.t1 MTR_8g033380 30.395 329 201 7 37 353 33 345 1.05e-40 147
MS.gene47397.t1 MTR_5g085330 31.250 288 177 6 63 344 3 275 2.60e-40 145
MS.gene47397.t1 MTR_2g437380 31.734 271 171 5 107 372 1 262 2.61e-40 144
MS.gene47397.t1 MTR_5g055690 34.052 232 144 4 64 293 46 270 4.07e-40 143
MS.gene47397.t1 MTR_7g056393 31.373 357 221 8 25 372 32 373 5.77e-40 145
MS.gene47397.t1 MTR_8g009170 32.967 273 161 8 25 292 27 282 6.76e-40 143
MS.gene47397.t1 MTR_1g070085 32.932 249 160 3 107 354 1 243 1.33e-39 142
MS.gene47397.t1 MTR_1g070100 33.061 245 157 3 111 354 1 239 3.88e-39 140
MS.gene47397.t1 MTR_3g088745 32.121 330 194 11 37 353 16 328 2.44e-38 141
MS.gene47397.t1 MTR_8g009150 29.532 342 192 11 24 355 26 328 4.97e-38 140
MS.gene47397.t1 MTR_0009s0050 32.453 265 151 8 121 379 4 246 7.12e-38 137
MS.gene47397.t1 MTR_0009s0050 32.830 265 150 8 121 379 4 246 9.66e-38 137
MS.gene47397.t1 MTR_3g117485 32.727 275 165 9 92 357 7 270 3.43e-37 136
MS.gene47397.t1 MTR_0009s0400 41.958 143 82 1 231 372 2 144 4.45e-36 129
MS.gene47397.t1 MTR_0009s0050 38.857 175 95 3 206 379 1 164 1.43e-35 129
MS.gene47397.t1 MTR_3g026150 30.769 273 170 8 26 293 24 282 1.66e-35 131
MS.gene47397.t1 MTR_1g043770 32.056 287 174 9 9 292 4 272 1.80e-35 132
MS.gene47397.t1 MTR_1g011580 30.503 318 199 8 37 347 30 332 6.28e-35 132
MS.gene47397.t1 MTR_4g087130 30.094 319 197 9 65 364 26 337 1.62e-34 130
MS.gene47397.t1 MTR_8g009080 31.250 288 180 8 24 307 57 330 1.78e-34 130
MS.gene47397.t1 MTR_1g043810 31.752 274 163 10 25 292 19 274 1.81e-34 130
MS.gene47397.t1 MTR_4g074130 30.565 301 168 9 45 329 22 297 1.88e-34 130
MS.gene47397.t1 MTR_7g078010 32.967 273 163 7 25 293 32 288 2.84e-34 129
MS.gene47397.t1 MTR_3g026150 29.434 265 177 5 110 372 1 257 5.60e-34 127
MS.gene47397.t1 MTR_8g009080 31.599 269 167 7 24 289 57 311 8.88e-34 128
MS.gene47397.t1 MTR_7g056353 29.586 338 190 8 25 355 34 330 1.05e-33 131
MS.gene47397.t1 MTR_1g043775 32.482 274 161 10 25 292 19 274 2.01e-33 126
MS.gene47397.t1 MTR_5g005570 31.013 316 189 10 44 344 8 309 6.54e-33 125
MS.gene47397.t1 MTR_8g093980 28.869 336 213 9 37 363 38 356 9.07e-33 126
MS.gene47397.t1 MTR_7g451860 29.900 301 189 8 61 356 37 320 2.33e-32 124
MS.gene47397.t1 MTR_7g047670 29.900 301 189 8 61 356 37 320 2.33e-32 124
MS.gene47397.t1 MTR_6g092620 29.252 294 184 7 63 349 1 277 5.45e-32 122
MS.gene47397.t1 MTR_8g093930 27.326 344 221 9 24 353 9 337 5.59e-32 124
MS.gene47397.t1 MTR_2g033270 30.070 286 177 7 63 341 17 286 7.83e-31 120
MS.gene47397.t1 MTR_3g040410 30.916 262 164 7 77 335 22 269 1.08e-30 119
MS.gene47397.t1 MTR_4g123020 28.135 327 178 11 65 357 20 323 1.43e-30 119
MS.gene47397.t1 MTR_2g083000 28.727 275 179 7 64 334 32 293 1.97e-30 119
MS.gene47397.t1 MTR_1g070110 29.435 248 138 2 107 353 4 215 2.69e-30 116
MS.gene47397.t1 MTR_4g115990 28.846 312 182 8 52 352 33 315 3.87e-30 118
MS.gene47397.t1 MTR_2g019370 26.689 296 187 8 65 346 28 307 6.41e-30 117
MS.gene47397.t1 MTR_2g083030 28.472 288 186 8 64 344 36 310 1.07e-29 117
MS.gene47397.t1 MTR_8g461330 27.336 289 177 9 64 336 26 297 3.07e-29 116
MS.gene47397.t1 MTR_1g086550 29.667 300 177 9 65 344 20 305 6.60e-29 115
MS.gene47397.t1 MTR_8g009180 36.196 163 93 3 196 354 121 276 1.63e-28 113
MS.gene47397.t1 MTR_4g132770 45.714 105 56 1 233 336 32 136 1.82e-28 109
MS.gene47397.t1 MTR_3g083370 31.915 235 139 7 65 293 4 223 1.24e-27 109
MS.gene47397.t1 MTR_2g025120 29.832 238 140 7 65 293 4 223 3.15e-27 107
MS.gene47397.t1 MTR_2g070870 26.518 313 200 11 52 350 8 304 4.03e-27 110
MS.gene47397.t1 MTR_6g088665 29.739 306 180 6 64 344 17 312 7.12e-27 109
MS.gene47397.t1 MTR_6g088665 29.642 307 180 6 64 344 17 313 8.93e-27 109
MS.gene47397.t1 MTR_4g100600 28.859 298 185 9 62 344 6 291 7.16e-26 106
MS.gene47397.t1 MTR_4g011720 25.545 321 199 8 64 366 8 306 1.12e-23 100
MS.gene47397.t1 MTR_8g102600 27.575 301 185 6 67 344 11 301 1.93e-23 99.8
MS.gene47397.t1 MTR_3g464530 28.745 247 151 9 83 318 45 277 2.44e-22 96.7
MS.gene47397.t1 MTR_4g011690 27.554 323 191 10 64 366 8 307 3.06e-22 96.3
MS.gene47397.t1 MTR_4g100590 25.256 293 197 6 62 344 6 286 5.52e-22 95.5
MS.gene47397.t1 MTR_4g096840 26.056 284 182 8 65 336 29 296 1.96e-21 94.4
MS.gene47397.t1 MTR_5g027230 26.266 316 203 10 65 372 6 299 1.10e-20 91.7
MS.gene47397.t1 MTR_1g043840 29.952 207 127 4 164 359 31 230 3.37e-20 90.9
MS.gene47397.t1 MTR_2g068850 33.113 151 94 2 24 173 20 164 2.16e-19 86.3
MS.gene47397.t1 MTR_1g032240 45.977 87 38 1 225 311 56 133 2.38e-19 85.1
MS.gene47397.t1 MTR_8g030880 25.676 296 187 8 63 344 8 284 9.18e-19 86.7
MS.gene47397.t1 MTR_5g025090 26.056 284 187 7 65 344 5 269 1.54e-18 85.5
MS.gene47397.t1 MTR_4g021380 23.676 321 209 12 64 364 6 310 1.26e-17 83.2
MS.gene47397.t1 MTR_3g108520 25.237 317 207 9 63 362 5 308 1.99e-17 82.8
MS.gene47397.t1 MTR_3g464530 27.027 222 137 9 83 293 45 252 7.51e-17 79.7
MS.gene47397.t1 MTR_4g021360 23.948 309 202 8 64 355 6 298 5.92e-16 78.2
MS.gene47397.t1 MTR_4g100600 29.630 216 131 7 62 267 6 210 6.99e-16 76.6
MS.gene47397.t1 MTR_5g024940 25.436 287 179 5 85 369 23 276 1.14e-15 77.0
MS.gene47397.t1 MTR_7g077670 24.843 318 207 9 59 363 5 303 1.22e-15 77.4
MS.gene47397.t1 MTR_4g094900 28.571 224 132 8 65 267 8 224 4.35e-15 74.7
MS.gene47397.t1 MTR_8g102600 30.846 201 128 6 162 354 64 261 7.65e-15 74.3
MS.gene47397.t1 MTR_6g035160 30.137 146 100 2 215 358 20 165 1.71e-14 71.6
MS.gene47397.t1 MTR_0009s0410 29.333 150 89 5 26 170 12 149 1.85e-14 71.2
MS.gene47397.t1 MTR_7g056370 26.882 186 126 5 25 208 11 188 1.96e-14 72.4
MS.gene47397.t1 MTR_7g090520 25.581 301 184 13 65 347 10 288 7.23e-14 72.0
MS.gene47397.t1 MTR_4g100610 27.232 224 135 8 63 268 7 220 1.46e-13 70.1
MS.gene47397.t1 MTR_3g040440 46.479 71 38 0 243 313 15 85 7.78e-13 68.2
MS.gene47397.t1 MTR_4g099380 28.966 145 92 5 25 166 137 273 1.38e-11 65.1
MS.gene47397.t1 MTR_1g011600 21.613 310 203 8 58 344 1 293 1.87e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47397.t1 AT2G36690 62.921 356 126 2 21 375 16 366 3.85e-169 477
MS.gene47397.t1 AT2G36690 62.921 356 126 2 21 375 16 366 3.85e-169 477
MS.gene47397.t1 AT2G44800 41.667 348 191 5 29 374 19 356 9.89e-95 287
MS.gene47397.t1 AT3G60290 41.176 357 198 5 17 371 7 353 1.23e-94 287
MS.gene47397.t1 AT4G10500 43.709 302 160 2 37 338 20 311 1.86e-88 271
MS.gene47397.t1 AT4G10490 41.009 317 173 3 22 338 7 309 4.50e-86 265
MS.gene47397.t1 AT5G07480 38.053 339 186 7 34 363 21 344 2.39e-77 243
MS.gene47397.t1 AT5G24530 39.189 296 163 5 28 320 4 285 1.93e-71 227
MS.gene47397.t1 AT2G38240 35.556 360 201 9 26 373 12 352 3.61e-67 216
MS.gene47397.t1 AT3G11180 35.345 348 213 6 26 369 56 395 5.09e-65 212
MS.gene47397.t1 AT1G55290 36.795 337 192 7 24 355 24 344 2.87e-63 206
MS.gene47397.t1 AT3G11180 34.758 351 213 7 26 368 56 398 5.63e-63 207
MS.gene47397.t1 AT5G05600 36.000 350 208 8 26 369 27 366 4.44e-61 201
MS.gene47397.t1 AT3G13610 33.731 335 204 6 24 355 25 344 8.26e-59 195
MS.gene47397.t1 AT3G12900 33.434 332 205 6 24 353 20 337 1.98e-58 194
MS.gene47397.t1 AT1G17010 32.861 353 222 9 25 372 16 358 3.37e-58 193
MS.gene47397.t1 AT3G55970 33.428 353 222 8 26 371 14 360 6.24e-58 192
MS.gene47397.t1 AT3G21420 33.148 359 221 8 23 372 14 362 2.92e-56 188
MS.gene47397.t1 AT4G16330 33.882 304 181 7 56 354 58 346 5.02e-55 185
MS.gene47397.t1 AT3G51240 36.594 276 157 7 64 331 37 302 5.50e-55 185
MS.gene47397.t1 AT1G17020 30.220 364 241 8 13 372 4 358 1.30e-54 184
MS.gene47397.t1 AT5G59530 35.503 338 192 11 25 352 23 344 2.29e-54 183
MS.gene47397.t1 AT4G25300 33.974 312 197 6 64 372 51 356 9.18e-54 182
MS.gene47397.t1 AT2G30840 34.311 341 199 9 25 355 20 345 1.03e-53 182
MS.gene47397.t1 AT1G06620 34.125 337 198 8 24 352 25 345 1.24e-53 181
MS.gene47397.t1 AT5G07480 36.905 252 144 5 129 372 1 245 1.74e-53 177
MS.gene47397.t1 AT5G43450 33.526 346 216 7 25 367 23 357 1.91e-53 181
MS.gene47397.t1 AT4G25420 33.939 330 188 7 37 353 40 352 2.72e-53 181
MS.gene47397.t1 AT4G25310 34.237 295 179 7 82 372 70 353 9.01e-52 176
MS.gene47397.t1 AT1G04350 33.799 358 211 11 24 372 20 360 1.17e-51 176
MS.gene47397.t1 AT1G03410 34.218 339 199 10 24 352 18 342 2.73e-51 175
MS.gene47397.t1 AT3G19010 33.613 357 200 11 41 377 8 347 2.87e-51 175
MS.gene47397.t1 AT3G19010 33.613 357 200 11 41 377 8 347 2.87e-51 175
MS.gene47397.t1 AT1G03410 34.218 339 199 10 24 352 55 379 5.44e-51 176
MS.gene47397.t1 AT2G30830 33.236 343 206 8 20 355 15 341 6.50e-51 174
MS.gene47397.t1 AT5G08640 33.645 321 194 6 37 352 19 325 1.00e-50 173
MS.gene47397.t1 AT5G08640 33.645 321 194 6 37 352 19 325 1.00e-50 173
MS.gene47397.t1 AT1G77330 32.770 296 184 5 63 353 1 286 1.05e-50 172
MS.gene47397.t1 AT1G03400 31.232 349 215 7 25 366 19 349 3.33e-50 172
MS.gene47397.t1 AT5G43440 33.333 327 203 7 25 346 23 339 4.55e-50 172
MS.gene47397.t1 AT2G30840 34.018 341 194 10 25 355 20 339 5.18e-50 172
MS.gene47397.t1 AT5G59540 34.604 341 192 12 25 352 24 346 8.41e-50 171
MS.gene47397.t1 AT1G78550 31.045 335 217 7 37 368 29 352 1.27e-49 171
MS.gene47397.t1 AT4G22880 30.564 337 224 7 26 355 7 340 4.23e-49 169
MS.gene47397.t1 AT4G22880 30.564 337 224 7 26 355 7 340 4.23e-49 169
MS.gene47397.t1 AT4G22880 30.564 337 224 7 26 355 7 340 4.23e-49 169
MS.gene47397.t1 AT1G04380 35.987 314 180 10 37 346 23 319 9.19e-49 168
MS.gene47397.t1 AT1G06650 32.948 346 200 11 24 353 24 353 2.80e-48 167
MS.gene47397.t1 AT3G61400 29.551 379 242 9 1 367 1 366 1.32e-47 166
MS.gene47397.t1 AT5G12270 33.506 385 213 13 5 372 1 359 9.49e-47 163
MS.gene47397.t1 AT1G06645 31.412 347 206 10 24 357 37 364 1.39e-46 163
MS.gene47397.t1 AT4G16330 35.409 257 152 5 117 369 9 255 1.67e-46 160
MS.gene47397.t1 AT5G20550 31.437 334 211 9 18 344 1 323 1.73e-46 162
MS.gene47397.t1 AT5G54000 30.631 333 215 8 18 344 1 323 1.38e-45 160
MS.gene47397.t1 AT3G19000 29.619 341 213 6 41 363 8 339 1.94e-45 160
MS.gene47397.t1 AT5G51810 32.209 326 195 7 37 353 42 350 3.22e-45 160
MS.gene47397.t1 AT3G19010 31.092 357 179 10 41 377 8 317 1.88e-44 156
MS.gene47397.t1 AT5G05600 35.401 274 161 8 26 293 27 290 1.90e-44 155
MS.gene47397.t1 AT2G25450 31.642 335 206 8 25 351 20 339 2.17e-44 157
MS.gene47397.t1 AT1G06640 31.988 347 202 11 24 353 24 353 2.25e-44 157
MS.gene47397.t1 AT1G03400 28.912 377 215 8 25 366 19 377 2.75e-44 157
MS.gene47397.t1 AT5G07200 29.412 340 212 7 28 353 28 353 3.49e-44 157
MS.gene47397.t1 AT1G49390 29.851 335 214 9 18 344 1 322 1.62e-43 154
MS.gene47397.t1 AT1G06620 34.672 274 158 7 24 292 25 282 2.26e-43 152
MS.gene47397.t1 AT3G55970 34.182 275 168 8 26 293 14 282 2.29e-43 153
MS.gene47397.t1 AT2G30840 35.766 274 156 7 25 292 20 279 2.38e-43 153
MS.gene47397.t1 AT1G78550 31.884 276 179 5 95 368 6 274 3.14e-43 152
MS.gene47397.t1 AT5G20400 29.909 331 219 7 18 344 1 322 6.95e-43 153
MS.gene47397.t1 AT1G60980 30.723 332 197 8 37 353 36 349 9.32e-43 153
MS.gene47397.t1 AT3G51240 37.719 228 126 6 110 331 1 218 4.68e-42 149
MS.gene47397.t1 AT1G15550 29.450 309 207 5 65 371 57 356 6.46e-42 150
MS.gene47397.t1 AT5G43450 33.209 268 168 5 25 292 23 279 2.14e-41 147
MS.gene47397.t1 AT5G63590 33.557 298 179 7 62 349 11 299 3.23e-41 147
MS.gene47397.t1 AT5G43440 32.714 269 171 5 25 292 23 282 4.47e-41 146
MS.gene47397.t1 AT2G06960 45.509 167 72 3 196 362 1 148 5.93e-41 142
MS.gene47397.t1 AT1G12010 30.877 285 176 7 60 338 2 271 9.23e-41 146
MS.gene47397.t1 AT5G54000 33.068 251 156 5 98 344 1 243 2.04e-40 144
MS.gene47397.t1 AT4G25420 33.459 266 147 7 37 289 40 288 3.47e-39 142
MS.gene47397.t1 AT1G80340 29.904 311 199 6 65 369 50 347 4.41e-39 142
MS.gene47397.t1 AT1G62380 29.474 285 180 6 60 338 2 271 1.46e-38 140
MS.gene47397.t1 AT5G59540 34.409 279 155 11 25 293 24 284 2.76e-38 139
MS.gene47397.t1 AT4G21200 32.364 275 170 7 61 332 38 299 2.87e-38 140
MS.gene47397.t1 AT1G04380 34.231 260 153 8 37 295 23 265 4.57e-38 138
MS.gene47397.t1 AT1G05010 32.014 278 169 6 65 336 4 267 6.03e-38 139
MS.gene47397.t1 AT3G19010 34.432 273 143 10 41 293 8 264 1.23e-37 137
MS.gene47397.t1 AT1G44090 30.743 296 186 6 59 343 57 344 1.27e-37 140
MS.gene47397.t1 AT1G49390 32.016 253 156 6 98 344 1 243 2.13e-37 136
MS.gene47397.t1 AT5G43935 33.106 293 166 9 64 353 18 283 2.41e-37 137
MS.gene47397.t1 AT1G06650 32.727 275 168 7 24 293 24 286 1.04e-36 135
MS.gene47397.t1 AT2G19590 29.749 279 182 5 60 336 6 272 1.24e-36 135
MS.gene47397.t1 AT1G80330 30.100 299 188 9 64 353 48 334 1.47e-35 133
MS.gene47397.t1 AT4G25300 36.224 196 119 3 178 372 72 262 1.56e-35 131
MS.gene47397.t1 AT3G61400 29.236 301 192 7 1 293 1 288 2.85e-35 131
MS.gene47397.t1 AT4G25310 30.508 295 162 8 82 372 70 325 3.76e-35 132
MS.gene47397.t1 AT1G50960 31.541 279 174 7 45 318 20 286 8.33e-35 131
MS.gene47397.t1 AT3G19000 28.470 281 174 6 39 301 6 277 3.02e-34 128
MS.gene47397.t1 AT3G49620 31.488 289 170 8 65 331 34 316 6.55e-34 129
MS.gene47397.t1 AT3G50210 32.215 298 161 12 65 331 8 295 1.25e-33 128
MS.gene47397.t1 AT3G50210 32.215 298 161 12 65 331 8 295 1.25e-33 128
MS.gene47397.t1 AT3G50210 32.215 298 161 12 65 331 8 295 1.25e-33 128
MS.gene47397.t1 AT5G63595 31.225 253 145 5 65 316 25 249 3.56e-33 125
MS.gene47397.t1 AT1G06640 31.560 282 174 7 24 299 24 292 4.57e-33 126
MS.gene47397.t1 AT1G78440 27.551 294 186 7 65 346 18 296 5.15e-33 126
MS.gene47397.t1 AT5G63600 27.523 327 205 8 50 368 18 320 6.60e-33 125
MS.gene47397.t1 AT5G51810 31.970 269 157 7 37 296 42 293 6.75e-33 125
MS.gene47397.t1 AT1G06640 31.985 272 166 7 24 289 24 282 8.34e-33 124
MS.gene47397.t1 AT5G63600 27.439 328 205 9 50 368 18 321 2.15e-32 124
MS.gene47397.t1 AT4G21690 27.541 305 205 6 65 362 47 342 2.66e-32 124
MS.gene47397.t1 AT3G49630 30.104 289 174 8 65 331 9 291 3.73e-31 121
MS.gene47397.t1 AT5G63580 33.621 232 141 5 65 293 19 240 6.87e-31 118
MS.gene47397.t1 AT5G63580 33.913 230 139 5 65 291 19 238 7.29e-31 118
MS.gene47397.t1 AT3G49630 30.682 264 165 7 80 331 30 287 3.98e-30 118
MS.gene47397.t1 AT3G46500 30.195 308 174 8 72 355 21 311 1.62e-26 108
MS.gene47397.t1 AT2G19590 29.457 258 161 6 81 336 19 257 3.08e-26 107
MS.gene47397.t1 AT1G30040 24.916 297 199 8 65 352 31 312 3.87e-26 107
MS.gene47397.t1 AT2G34555 25.155 322 216 10 65 376 27 333 1.13e-23 100
MS.gene47397.t1 AT1G02400 25.240 313 206 11 45 344 4 301 1.22e-23 100
MS.gene47397.t1 AT3G47190 25.874 286 184 6 44 315 8 279 3.69e-23 99.4
MS.gene47397.t1 AT3G46500 30.451 266 145 7 72 313 21 270 6.78e-23 97.8
MS.gene47397.t1 AT1G14130 27.178 287 182 9 65 344 9 275 2.12e-21 94.0
MS.gene47397.t1 AT3G46490 27.703 296 176 7 85 354 34 317 4.31e-21 93.6
MS.gene47397.t1 AT1G35190 28.808 302 191 7 72 354 16 312 7.70e-21 92.8
MS.gene47397.t1 AT1G35190 28.621 290 160 8 84 354 28 289 1.09e-20 91.7
MS.gene47397.t1 AT1G47990 27.660 329 187 13 65 372 15 313 1.43e-20 91.7
MS.gene47397.t1 AT3G46490 28.975 283 153 8 85 337 34 298 3.78e-20 90.5
MS.gene47397.t1 AT5G58660 24.490 343 200 11 44 351 8 326 3.82e-20 90.9
MS.gene47397.t1 AT4G23340 26.518 313 196 10 62 360 7 299 8.18e-20 89.7
MS.gene47397.t1 AT1G52820 24.922 321 197 10 63 363 10 306 8.99e-20 89.4
MS.gene47397.t1 AT3G50210 32.738 168 102 5 170 331 51 213 2.96e-19 86.7
MS.gene47397.t1 AT1G28030 27.129 317 179 13 63 353 11 301 4.63e-19 87.4
MS.gene47397.t1 AT3G49630 32.927 164 102 4 170 331 61 218 2.29e-18 84.3
MS.gene47397.t1 AT1G14120 26.460 291 193 6 58 344 1 274 1.54e-17 82.8
MS.gene47397.t1 AT1G14120 26.460 291 193 6 58 344 1 274 1.54e-17 82.8
MS.gene47397.t1 AT1G14120 26.460 291 193 6 58 344 1 274 1.54e-17 82.8
MS.gene47397.t1 AT3G46500 40.171 117 64 2 244 355 60 175 1.73e-17 80.1
MS.gene47397.t1 AT3G46500 31.068 206 124 5 156 355 44 237 4.41e-17 80.5
MS.gene47397.t1 AT3G46500 31.068 206 124 5 156 355 44 237 4.41e-17 80.5
MS.gene47397.t1 AT4G03070 25.994 327 206 13 55 363 2 310 5.95e-17 81.3
MS.gene47397.t1 AT1G30040 24.790 238 155 8 65 293 31 253 2.53e-16 78.6
MS.gene47397.t1 AT3G46480 40.678 118 64 2 243 355 155 271 4.55e-15 75.5
MS.gene47397.t1 AT4G22870 37.895 95 58 1 262 355 2 96 5.56e-15 70.9
MS.gene47397.t1 AT4G23340 28.261 138 95 2 227 360 44 181 4.47e-14 70.9
MS.gene47397.t1 AT4G16765 30.481 187 116 6 167 344 46 227 1.81e-13 69.7
MS.gene47397.t1 AT3G46500 46.667 75 35 1 244 313 91 165 2.22e-13 68.6
MS.gene47397.t1 AT3G46500 46.667 75 35 1 244 313 91 165 2.22e-13 68.6
MS.gene47397.t1 AT3G46500 32.484 157 89 4 163 313 51 196 2.25e-13 69.3
MS.gene47397.t1 AT4G16765 37.037 108 62 2 242 344 75 181 3.69e-13 68.2
MS.gene47397.t1 AT4G16765 29.947 187 117 6 167 344 46 227 7.11e-13 68.2
MS.gene47397.t1 AT4G16765 29.947 187 117 6 167 344 46 227 7.11e-13 68.2
MS.gene47397.t1 AT4G16765 29.947 187 117 6 167 344 46 227 7.11e-13 68.2
MS.gene47397.t1 AT4G03050 31.746 126 84 2 240 363 271 396 8.50e-13 69.7
MS.gene47397.t1 AT4G03050 31.746 126 84 2 240 363 271 396 8.50e-13 69.7
MS.gene47397.t1 AT4G22870 36.364 88 55 1 269 355 50 137 5.08e-12 63.9
MS.gene47397.t1 AT1G52820 23.600 250 149 8 63 293 10 236 7.20e-12 65.5

Find 88 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGAACTTGGGGCCTATT+TGG 0.213981 1.4:-51200813 None:intergenic
ACACTTATTTCTAAGGTTAA+TGG 0.222487 1.4:+51203689 MS.gene47397:CDS
ACAACGAATGCATTATTAAT+AGG 0.241440 1.4:-51203951 None:intergenic
AAACCAAACACTTATTTCTA+AGG 0.253076 1.4:+51203682 MS.gene47397:CDS
TGAACCATTGTTCTTGGAAT+TGG 0.275458 1.4:-51203920 None:intergenic
CTGATTTGATTGGTCCAAAT+AGG 0.299399 1.4:+51200799 MS.gene47397:CDS
ATCGGTGTCTGCGTAACGTT+TGG 0.310799 1.4:-51205156 None:intergenic
AAATCAGAGAAATCTATTAT+TGG 0.318250 1.4:-51200783 None:intergenic
GGACAATATTATCAAAGAAT+TGG 0.341222 1.4:+51203761 MS.gene47397:CDS
GAACCGTGAACCATTGTTCT+TGG 0.352914 1.4:-51203926 None:intergenic
CTTAAGTCCACGGGTGAATC+AGG 0.362636 1.4:-51202032 None:intergenic
TGCCTGATTATCTTCCTCAT+TGG 0.367558 1.4:+51202009 MS.gene47397:CDS
AATCTATTATTGGTAGTTGT+AGG 0.377947 1.4:-51200773 None:intergenic
ATAGATTTCTCTGATTTGAT+TGG 0.378631 1.4:+51200789 MS.gene47397:CDS
TACTTACCTCTTTCCTCAAA+TGG 0.387893 1.4:-51201879 None:intergenic
CTGATTCACCCGTGGACTTA+AGG 0.394075 1.4:+51202033 MS.gene47397:CDS
TATACCTAAACTCTCTACTA+TGG 0.399689 1.4:-51203715 None:intergenic
CTTCTCCAAGATGAGGTAGA+AGG 0.400521 1.4:+51203888 MS.gene47397:CDS
GTCAAGCAGCTAGTTGATAA+TGG 0.406429 1.4:+51200663 MS.gene47397:CDS
GGAAGATGGAAGCCAGCTTA+TGG 0.408489 1.4:+51203782 MS.gene47397:CDS
ATGAGAGCAGCAGTTCGATA+TGG 0.411261 1.4:+51201915 MS.gene47397:CDS
GGCCAATGAGGAAGATAATC+AGG 0.414428 1.4:-51202011 None:intergenic
TAACCTTAGAAATAAGTGTT+TGG 0.414596 1.4:-51203685 None:intergenic
ACTCTTTCTCTTGGTTTCGT+TGG 0.418266 1.4:-51205207 None:intergenic
GAATCTTCTGTATTCTTAGC+AGG 0.420646 1.4:-51200732 None:intergenic
TCGGTGTCTGCGTAACGTTT+GGG 0.421674 1.4:-51205155 None:intergenic
GAAGCCATAGTAGAGAGTTT+AGG 0.422645 1.4:+51203711 MS.gene47397:CDS
GTCTGCGTAACGTTTGGGAT+TGG 0.431669 1.4:-51205150 None:intergenic
CTCCAGAAAACTCTTTCTCT+TGG 0.443477 1.4:-51205216 None:intergenic
GGCAAGAAAAGTTTCAAAAT+CGG 0.448587 1.4:-51205174 None:intergenic
TTAATTAAAATGTAGGAAAG+TGG 0.466796 1.4:+51203641 MS.gene47397:intron
CAAAAGACAAAGTGTTCTGT+TGG 0.471022 1.4:+51201955 MS.gene47397:CDS
TAGCTAATGACTGAAGAACT+TGG 0.472875 1.4:-51200824 None:intergenic
AATACAAGAGTGTGCTACAT+AGG 0.473985 1.4:+51205027 MS.gene47397:CDS
GCAAACCTTCTACCTCATCT+TGG 0.477634 1.4:-51203893 None:intergenic
ACATAAGATGTCAGCTGGAA+TGG 0.482317 1.4:+51200581 None:intergenic
TGAAGCCAACAAAGAAGAAA+AGG 0.484492 1.4:+51203740 MS.gene47397:CDS
AGCTAATGACTGAAGAACTT+GGG 0.492824 1.4:-51200823 None:intergenic
GGCATCCCTAGGGTTAGGTC+AGG 0.492951 1.4:-51203834 None:intergenic
GATCTTCCATTTGAGGAAAG+AGG 0.501424 1.4:+51201873 MS.gene47397:CDS
GGTTTCGTTGGTTGAAATGT+GGG 0.516096 1.4:-51205195 None:intergenic
TAACATCTTCTGAGATTCCA+TGG 0.516143 1.4:-51201815 None:intergenic
ATTATCAAAGAATTGGAAGA+TGG 0.516585 1.4:+51203768 MS.gene47397:CDS
GTTAGGTCAGGTTGAGGACA+TGG 0.520576 1.4:-51203822 None:intergenic
TAGTTAGTGAAGATATCAAA+GGG 0.523214 1.4:+51200607 MS.gene47397:CDS
TGGTTTCGTTGGTTGAAATG+TGG 0.525695 1.4:-51205196 None:intergenic
ATATTACATAAGATGTCAGC+TGG 0.526489 1.4:+51200576 None:intergenic
ATAGAAAATCAATTTCTGAA+TGG 0.536962 1.4:+51200639 MS.gene47397:CDS
ATTCCAAGAACAATGGTTCA+CGG 0.541633 1.4:+51203923 MS.gene47397:CDS
GCTAATGCTTGTGAACGGTA+TGG 0.542680 1.4:+51200843 MS.gene47397:CDS
AGGAATCCATAGTCAGAATG+AGG 0.549394 1.4:-51203858 None:intergenic
TTCTTAGCAGGACGTTCAGA+AGG 0.559675 1.4:-51200720 None:intergenic
GTGTTTGGTTTCTTCTGCGT+AGG 0.567429 1.4:-51203670 None:intergenic
ATAGTTAGTGAAGATATCAA+AGG 0.575844 1.4:+51200606 MS.gene47397:CDS
AATGCATTCGTTGTCAATGT+TGG 0.578383 1.4:+51203960 MS.gene47397:CDS
ATACAAGAGTGTGCTACATA+GGG 0.579473 1.4:+51205028 MS.gene47397:CDS
TTGATAAAGGTGGTAAACCA+TGG 0.580589 1.4:+51201798 MS.gene47397:intron
CCTCAACCTGACCTAACCCT+AGG 0.580697 1.4:+51203828 MS.gene47397:CDS
TTAGCAGGACGTTCAGAAGG+AGG 0.581753 1.4:-51200717 None:intergenic
AAATACACACCTTAAGTCCA+CGG 0.583362 1.4:-51202042 None:intergenic
AGATGTTATCAACAACATGA+TGG 0.583825 1.4:+51201830 MS.gene47397:CDS
CCTAGGGTTAGGTCAGGTTG+AGG 0.589376 1.4:-51203828 None:intergenic
CTTCTACCTCATCTTGGAGA+AGG 0.590722 1.4:-51203887 None:intergenic
ATTAAAATGTAGGAAAGTGG+CGG 0.593821 1.4:+51203644 MS.gene47397:intron
GAAGATAATCAGGCAAAGGA+TGG 0.594394 1.4:-51202001 None:intergenic
GAAGATATCAAAGGGGTCGA+TGG 0.595999 1.4:+51200615 MS.gene47397:CDS
CTCAACCTGACCTAACCCTA+GGG 0.597884 1.4:+51203829 MS.gene47397:CDS
TGAGGAAGATAATCAGGCAA+AGG 0.601191 1.4:-51202005 None:intergenic
TCATTGGCCTGATTCACCCG+TGG 0.604316 1.4:+51202025 MS.gene47397:CDS
AATGCTATGCAATGAAGCAA+TGG 0.614624 1.4:-51205081 None:intergenic
TTGGCTTTGTCAATGAGTGT+AGG 0.614803 1.4:-51205131 None:intergenic
AATACACACCTTAAGTCCAC+GGG 0.616230 1.4:-51202041 None:intergenic
GCTAATGACTGAAGAACTTG+GGG 0.626050 1.4:-51200822 None:intergenic
GGAATCCATAGTCAGAATGA+GGG 0.629331 1.4:-51203857 None:intergenic
AAGTCCAATTCCAAGAACAA+TGG 0.641965 1.4:+51203916 MS.gene47397:CDS
ACGGGTGAATCAGGCCAATG+AGG 0.642092 1.4:-51202023 None:intergenic
CATTAGCTAATGCTTGTGAA+CGG 0.649236 1.4:+51200838 MS.gene47397:CDS
CATCTTGGAGAAGGAGTGTG+AGG 0.650271 1.4:-51203878 None:intergenic
AGATGGAAGCCAGCTTATGG+CGG 0.651529 1.4:+51203785 MS.gene47397:CDS
CACACTCCTTCTCCAAGATG+AGG 0.654262 1.4:+51203881 MS.gene47397:CDS
TTGTCAATGAGTGTAGGTGA+CGG 0.654799 1.4:-51205125 None:intergenic
CAATGTTGGTGATCACCTTG+AGG 0.661702 1.4:+51203974 MS.gene47397:CDS
AGTTGATAATGGACTTCACA+TGG 0.677332 1.4:+51200674 MS.gene47397:CDS
GAATCCATAGTCAGAATGAG+GGG 0.688282 1.4:-51203856 None:intergenic
AATCCATAGTCAGAATGAGG+GGG 0.703984 1.4:-51203855 None:intergenic
AACAACATGATGGATGTGTG+TGG 0.705462 1.4:+51201840 MS.gene47397:CDS
AGGTCAGGTTGAGGACATGG+TGG 0.710387 1.4:-51203819 None:intergenic
AGTTAGTGAAGATATCAAAG+GGG 0.743882 1.4:+51200608 MS.gene47397:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATAAATTATATAATA+TGG + chr1.4:51204711-51204730 MS.gene47397:intron 0.0%
!! AAAACTATTAAAATTAAGTA+AGG - chr1.4:51201212-51201231 None:intergenic 10.0%
!! AATTGTATATATATACATTA+AGG - chr1.4:51202706-51202725 None:intergenic 10.0%
!! ATAAATAAATAACTTAGTTA+TGG + chr1.4:51200940-51200959 MS.gene47397:intron 10.0%
!! ATTGTATATATATACATTAA+GGG - chr1.4:51202705-51202724 None:intergenic 10.0%
!! CATTATATCAATAATAAATA+AGG + chr1.4:51202883-51202902 MS.gene47397:intron 10.0%
!! TAATCCTATTAAAAAATTTA+GGG - chr1.4:51201595-51201614 None:intergenic 10.0%
!! TATAACAAGATAAATTATAT+TGG - chr1.4:51204524-51204543 None:intergenic 10.0%
!! TTAATCCTATTAAAAAATTT+AGG - chr1.4:51201596-51201615 None:intergenic 10.0%
!!! GATTAAAGTAAATAAATTTT+TGG + chr1.4:51201138-51201157 MS.gene47397:intron 10.0%
!!! TAAAAGTTTTCAATTTTATA+AGG - chr1.4:51201181-51201200 None:intergenic 10.0%
!!! TAATATTTTGAACAATTATT+AGG - chr1.4:51202299-51202318 None:intergenic 10.0%
!!! TTGATTTTTAATTAAAATGT+AGG + chr1.4:51203634-51203653 MS.gene47397:intron 10.0%
!! AATGTAATATTTAAATGTGT+AGG - chr1.4:51204738-51204757 None:intergenic 15.0%
!! AGATAAAAACAACAAAAATT+TGG + chr1.4:51201435-51201454 MS.gene47397:intron 15.0%
!! ATGTAATATTTAAATGTGTA+GGG - chr1.4:51204737-51204756 None:intergenic 15.0%
!! GTTAAACCTTATAAAAATAT+CGG + chr1.4:51200962-51200981 MS.gene47397:intron 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr1.4:51201302-51201321 None:intergenic 15.0%
!!! AATAAAGTCTCAATTTTATA+GGG + chr1.4:51201552-51201571 MS.gene47397:intron 15.0%
!!! ATGATATATGTAATCATTTT+TGG + chr1.4:51204377-51204396 MS.gene47397:intron 15.0%
!!! ATTTAACCGATATTTTTATA+AGG - chr1.4:51200971-51200990 None:intergenic 15.0%
!!! ATTTTCTTCTTTATTCTTTT+GGG + chr1.4:51204418-51204437 MS.gene47397:intron 15.0%
!!! TAATAAAGTCTCAATTTTAT+AGG + chr1.4:51201551-51201570 MS.gene47397:intron 15.0%
!!! TACATGTAAATATTTTTTGT+AGG - chr1.4:51201242-51201261 None:intergenic 15.0%
!!! TGATATATGTAATCATTTTT+GGG + chr1.4:51204378-51204397 MS.gene47397:intron 15.0%
!!! TGTGTATTATAATTTGTTTA+GGG + chr1.4:51202234-51202253 MS.gene47397:intron 15.0%
!!! TTAACCCTAAATTTTTTAAT+AGG + chr1.4:51201588-51201607 MS.gene47397:intron 15.0%
!!! TTGTGTATTATAATTTGTTT+AGG + chr1.4:51202233-51202252 MS.gene47397:intron 15.0%
!!! TTTTTAAAGATACAAATTAG+TGG + chr1.4:51203076-51203095 MS.gene47397:intron 15.0%
!! AAATCAGAGAAATCTATTAT+TGG - chr1.4:51200786-51200805 None:intergenic 20.0%
!! AGTATATCTACTAATTTGAT+AGG + chr1.4:51203405-51203424 MS.gene47397:intron 20.0%
!! ATACTATATTGTAATTGTTG+AGG - chr1.4:51203601-51203620 None:intergenic 20.0%
!! ATAGAAAATCAATTTCTGAA+TGG + chr1.4:51200639-51200658 MS.gene47397:CDS 20.0%
!! ATTAGTAGATATACTTACAA+AGG - chr1.4:51203400-51203419 None:intergenic 20.0%
!! CAAAATTTAACCTAAAACAA+TGG + chr1.4:51203348-51203367 MS.gene47397:intron 20.0%
!! CCCTAAAAAAATTGAATATA+GGG + chr1.4:51203474-51203493 MS.gene47397:intron 20.0%
!! GTAATCAGATATCATATAAT+TGG + chr1.4:51204124-51204143 MS.gene47397:intron 20.0%
!! TAATTCCATAAATGCAAATA+AGG - chr1.4:51201061-51201080 None:intergenic 20.0%
!! TAGAAAAGTCATAAATAAGT+CGG + chr1.4:51202483-51202502 MS.gene47397:intron 20.0%
!! TCCCTAAAAAAATTGAATAT+AGG + chr1.4:51203473-51203492 MS.gene47397:intron 20.0%
!! TCTCTATAAATAAATCGTTA+TGG - chr1.4:51204356-51204375 None:intergenic 20.0%
!! TCTTAAAAAATATGTGTAGA+TGG - chr1.4:51204641-51204660 None:intergenic 20.0%
!! TTAAACTTACAACTAACTAA+TGG - chr1.4:51204014-51204033 None:intergenic 20.0%
!! TTAATTAAAATGTAGGAAAG+TGG + chr1.4:51203641-51203660 MS.gene47397:intron 20.0%
!! TTAGTTAGTTGTAAGTTTAA+TGG + chr1.4:51204014-51204033 MS.gene47397:intron 20.0%
!!! ATATTGGTACAAACTTATTT+TGG - chr1.4:51204508-51204527 None:intergenic 20.0%
!!! ATTTTGAAATGACTTTTTTG+CGG + chr1.4:51201471-51201490 MS.gene47397:intron 20.0%
!!! CATTTCAAAATTTGATTTCT+AGG - chr1.4:51201462-51201481 None:intergenic 20.0%
!!! CATTTTCTTCTTTATTCTTT+TGG + chr1.4:51204417-51204436 MS.gene47397:intron 20.0%
!!! CCCTATATTCAATTTTTTTA+GGG - chr1.4:51203477-51203496 None:intergenic 20.0%
!!! GTGTATTATAATTTGTTTAG+GGG + chr1.4:51202235-51202254 MS.gene47397:intron 20.0%
!!! TCCCTATATTCAATTTTTTT+AGG - chr1.4:51203478-51203497 None:intergenic 20.0%
!!! TTAGTTTTGTCTTAACTAAT+AGG + chr1.4:51204292-51204311 MS.gene47397:intron 20.0%
!!! TTTAGGGTTAAATATGTTTT+TGG - chr1.4:51201579-51201598 None:intergenic 20.0%
!!! TTTTGTGTTTTGTTTGATAA+AGG + chr1.4:51201785-51201804 MS.gene47397:intron 20.0%
! AATCAACCAACTTTCTTAAT+TGG + chr1.4:51202340-51202359 MS.gene47397:intron 25.0%
! AATTATTTAGAGGACACAAT+TGG - chr1.4:51202843-51202862 None:intergenic 25.0%
! ACAACGAATGCATTATTAAT+AGG - chr1.4:51203954-51203973 None:intergenic 25.0%
! ACACAATAAAAGTAGAAGTT+GGG - chr1.4:51202464-51202483 None:intergenic 25.0%
! AGAAAAGTCATAAATAAGTC+GGG + chr1.4:51202484-51202503 MS.gene47397:intron 25.0%
! ATAGTTAGTGAAGATATCAA+AGG + chr1.4:51200606-51200625 MS.gene47397:CDS 25.0%
! ATCTTACCATTGAGTTAAAA+TGG + chr1.4:51204819-51204838 MS.gene47397:intron 25.0%
! ATGAAATTCTGATATTGCAA+TGG + chr1.4:51204261-51204280 MS.gene47397:intron 25.0%
! ATTAGGTTATGTTTGGTAAA+AGG + chr1.4:51203104-51203123 MS.gene47397:intron 25.0%
! ATTATCAAAGAATTGGAAGA+TGG + chr1.4:51203768-51203787 MS.gene47397:CDS 25.0%
! CATAAAACAATAAACTCTCA+TGG + chr1.4:51204183-51204202 MS.gene47397:intron 25.0%
! CATAATCATATAATAAGTCC+TGG + chr1.4:51202178-51202197 MS.gene47397:intron 25.0%
! GAAGAATTAGCAACTTAAAT+AGG - chr1.4:51204971-51204990 None:intergenic 25.0%
! GGACAATATTATCAAAGAAT+TGG + chr1.4:51203761-51203780 MS.gene47397:CDS 25.0%
! TAACCTTAGAAATAAGTGTT+TGG - chr1.4:51203688-51203707 None:intergenic 25.0%
! TACACAATAAAAGTAGAAGT+TGG - chr1.4:51202465-51202484 None:intergenic 25.0%
! TAGTTAGTGAAGATATCAAA+GGG + chr1.4:51200607-51200626 MS.gene47397:CDS 25.0%
! TATTAGGTATCCATTTACAA+TGG - chr1.4:51202283-51202302 None:intergenic 25.0%
! TTTGTACCAATTAAGAAAGT+TGG - chr1.4:51202349-51202368 None:intergenic 25.0%
!! AATCTATTATTGGTAGTTGT+AGG - chr1.4:51200776-51200795 None:intergenic 25.0%
!! ACAAATTAGTGGTCTTAATT+AGG + chr1.4:51203087-51203106 MS.gene47397:intron 25.0%
!! ATAGATTTCTCTGATTTGAT+TGG + chr1.4:51200789-51200808 MS.gene47397:CDS 25.0%
!! CAAGTTTAGAACATTACAAA+AGG + chr1.4:51201336-51201355 MS.gene47397:intron 25.0%
!! GTTAGTATATGAAAGTTTTG+TGG - chr1.4:51200891-51200910 None:intergenic 25.0%
!! TGTGAAGTTTGAAATCTTAA+AGG + chr1.4:51203144-51203163 MS.gene47397:intron 25.0%
!! TTAGTCCTTATTTGCATTTA+TGG + chr1.4:51201053-51201072 MS.gene47397:intron 25.0%
!!! AAAATGAGTGTTTTAGTTCT+TGG - chr1.4:51201095-51201114 None:intergenic 25.0%
!!! AAACCAAACACTTATTTCTA+AGG + chr1.4:51203682-51203701 MS.gene47397:CDS 25.0%
!!! AAACGACACGTATTTTAAAA+AGG + chr1.4:51202972-51202991 MS.gene47397:intron 25.0%
!!! ACACTTATTTCTAAGGTTAA+TGG + chr1.4:51203689-51203708 MS.gene47397:CDS 25.0%
!!! ATTTTTTGATCTTCCATTTG+AGG + chr1.4:51201866-51201885 MS.gene47397:CDS 25.0%
!!! TGCTTTGTTGTTAGAAATTT+TGG - chr1.4:51204794-51204813 None:intergenic 25.0%
!!! TTTTTGGGTAAACATGTTTT+TGG + chr1.4:51201154-51201173 MS.gene47397:intron 25.0%
AACAAATGCAGCACTTATTA+AGG + chr1.4:51202535-51202554 MS.gene47397:intron 30.0%
AGATGTTATCAACAACATGA+TGG + chr1.4:51201830-51201849 MS.gene47397:CDS 30.0%
AGTTAGTGAAGATATCAAAG+GGG + chr1.4:51200608-51200627 MS.gene47397:CDS 30.0%
ATTAAAATGTAGGAAAGTGG+CGG + chr1.4:51203644-51203663 MS.gene47397:intron 30.0%
CTCTTCATTAAATTAGTACC+AGG - chr1.4:51202199-51202218 None:intergenic 30.0%
GGCAAGAAAAGTTTCAAAAT+CGG - chr1.4:51205177-51205196 None:intergenic 30.0%
GGTCTTAATTAGGTTATGTT+TGG + chr1.4:51203097-51203116 MS.gene47397:intron 30.0%
TAATCAATTCAATCTCTACG+TGG + chr1.4:51202095-51202114 MS.gene47397:intron 30.0%
TATACCTAAACTCTCTACTA+TGG - chr1.4:51203718-51203737 None:intergenic 30.0%
TTGGTACAAATTTGTCAATG+AGG + chr1.4:51202359-51202378 MS.gene47397:intron 30.0%
TTGTTAGCATTTCCATACTT+AGG - chr1.4:51202520-51202539 None:intergenic 30.0%
TTTCTTCTTCTACTAACAGA+TGG - chr1.4:51203240-51203259 None:intergenic 30.0%
! AAAGAAATTTTGTCCTAGCA+GGG - chr1.4:51201273-51201292 None:intergenic 30.0%
! AGAAGCTACTTTAAAAGAGA+AGG - chr1.4:51202423-51202442 None:intergenic 30.0%
! AGTGTCACTCAATTATTTAG+AGG - chr1.4:51202853-51202872 None:intergenic 30.0%
! ATTGTCCTTTTCTTCTTTGT+TGG - chr1.4:51203748-51203767 None:intergenic 30.0%
! TAAAGAAATTTTGTCCTAGC+AGG - chr1.4:51201274-51201293 None:intergenic 30.0%
! TCTCTTTTCTATATCTCTCT+GGG + chr1.4:51203540-51203559 MS.gene47397:intron 30.0%
! TTCTCTTTTCTATATCTCTC+TGG + chr1.4:51203539-51203558 MS.gene47397:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr1.4:51202750-51202769 None:intergenic 30.0%
!!! TCATTTTTGGGACAACTTTT+AGG + chr1.4:51204390-51204409 MS.gene47397:intron 30.0%
!!! TGTGTTTTGTTTGATAAAGG+TGG + chr1.4:51201788-51201807 MS.gene47397:intron 30.0%
AAAACACTAGAGAGAGAAAG+AGG + chr1.4:51204443-51204462 MS.gene47397:intron 35.0%
AAACACTAGAGAGAGAAAGA+GGG + chr1.4:51204444-51204463 MS.gene47397:intron 35.0%
AAATACACACCTTAAGTCCA+CGG - chr1.4:51202045-51202064 None:intergenic 35.0%
AAATGTTAAAGAATGCCCGT+AGG - chr1.4:51202682-51202701 None:intergenic 35.0%
AAGTCCAATTCCAAGAACAA+TGG + chr1.4:51203916-51203935 MS.gene47397:CDS 35.0%
AATGCATTCGTTGTCAATGT+TGG + chr1.4:51203960-51203979 MS.gene47397:CDS 35.0%
AATGCTATGCAATGAAGCAA+TGG - chr1.4:51205084-51205103 None:intergenic 35.0%
ACCATTGAGTTAAAATGGCA+TGG + chr1.4:51204824-51204843 MS.gene47397:intron 35.0%
AGCTAATGACTGAAGAACTT+GGG - chr1.4:51200826-51200845 None:intergenic 35.0%
ATTCCAAGAACAATGGTTCA+CGG + chr1.4:51203923-51203942 MS.gene47397:CDS 35.0%
CATTAGCTAATGCTTGTGAA+CGG + chr1.4:51200838-51200857 MS.gene47397:CDS 35.0%
CTTCTATGCCTCAAAAAAGT+TGG + chr1.4:51202438-51202457 MS.gene47397:intron 35.0%
GAATCTTCTGTATTCTTAGC+AGG - chr1.4:51200735-51200754 None:intergenic 35.0%
GATAGTTGGTCCATTGTAAA+TGG + chr1.4:51202270-51202289 MS.gene47397:intron 35.0%
TACTTACCTCTTTCCTCAAA+TGG - chr1.4:51201882-51201901 None:intergenic 35.0%
TAGCTAATGACTGAAGAACT+TGG - chr1.4:51200827-51200846 None:intergenic 35.0%
TGAACCATTGTTCTTGGAAT+TGG - chr1.4:51203923-51203942 None:intergenic 35.0%
TGAAGCCAACAAAGAAGAAA+AGG + chr1.4:51203740-51203759 MS.gene47397:CDS 35.0%
TTGATAAAGGTGGTAAACCA+TGG + chr1.4:51201798-51201817 MS.gene47397:intron 35.0%
! AACCAAGAGAAAGAGTTTTC+TGG + chr1.4:51205214-51205233 MS.gene47397:CDS 35.0%
! AATACAAGAGTGTGCTACAT+AGG + chr1.4:51205027-51205046 MS.gene47397:CDS 35.0%
! ATACAAGAGTGTGCTACATA+GGG + chr1.4:51205028-51205047 MS.gene47397:CDS 35.0%
! CAAAAGACAAAGTGTTCTGT+TGG + chr1.4:51201955-51201974 MS.gene47397:CDS 35.0%
! CTGATTTGATTGGTCCAAAT+AGG + chr1.4:51200799-51200818 MS.gene47397:CDS 35.0%
!! ACCTAAAACAATGGTTTTGC+TGG + chr1.4:51203357-51203376 MS.gene47397:intron 35.0%
!! AGTTGATAATGGACTTCACA+TGG + chr1.4:51200674-51200693 MS.gene47397:CDS 35.0%
!! ATGTAATTTTAGTCCCTGCT+AGG + chr1.4:51201257-51201276 MS.gene47397:intron 35.0%
!! GGAGGAAGTATGTACTTTTT+AGG - chr1.4:51200702-51200721 None:intergenic 35.0%
!! TAACATCTTCTGAGATTCCA+TGG - chr1.4:51201818-51201837 None:intergenic 35.0%
!!! CTTCTCAGATTTTTAGCAAC+GGG + chr1.4:51205003-51205022 MS.gene47397:intron 35.0%
!!! GCTTCTCAGATTTTTAGCAA+CGG + chr1.4:51205002-51205021 MS.gene47397:intron 35.0%
!!! TCCATGCCATTTTAACTCAA+TGG - chr1.4:51204828-51204847 None:intergenic 35.0%
!!! TGGTAGTTGTAGGTTTTGTT+TGG - chr1.4:51200766-51200785 None:intergenic 35.0%
!!! TGTTTTAGTTCTTGGCTTCT+TGG - chr1.4:51201087-51201106 None:intergenic 35.0%
AAAAATTTGCCGCCATAAGC+TGG - chr1.4:51203797-51203816 None:intergenic 40.0%
AATACACACCTTAAGTCCAC+GGG - chr1.4:51202044-51202063 None:intergenic 40.0%
AATCCATAGTCAGAATGAGG+GGG - chr1.4:51203858-51203877 None:intergenic 40.0%
ACTCTTTCTCTTGGTTTCGT+TGG - chr1.4:51205210-51205229 None:intergenic 40.0%
AGGAATCCATAGTCAGAATG+AGG - chr1.4:51203861-51203880 None:intergenic 40.0%
CTCCAGAAAACTCTTTCTCT+TGG - chr1.4:51205219-51205238 None:intergenic 40.0%
GAAGATAATCAGGCAAAGGA+TGG - chr1.4:51202004-51202023 None:intergenic 40.0%
GAAGCCATAGTAGAGAGTTT+AGG + chr1.4:51203711-51203730 MS.gene47397:CDS 40.0%
GAATATCCATCCATACCTCA+AGG - chr1.4:51203992-51204011 None:intergenic 40.0%
GAATCCATAGTCAGAATGAG+GGG - chr1.4:51203859-51203878 None:intergenic 40.0%
GATCTTCCATTTGAGGAAAG+AGG + chr1.4:51201873-51201892 MS.gene47397:CDS 40.0%
GCTAATGACTGAAGAACTTG+GGG - chr1.4:51200825-51200844 None:intergenic 40.0%
GGAATCCATAGTCAGAATGA+GGG - chr1.4:51203860-51203879 None:intergenic 40.0%
GGTCACTAATTGTAGATGAC+AGG - chr1.4:51204335-51204354 None:intergenic 40.0%
TACCACTACTTTCCATTTCC+CGG - chr1.4:51202393-51202412 None:intergenic 40.0%
TGAGGAAGATAATCAGGCAA+AGG - chr1.4:51202008-51202027 None:intergenic 40.0%
TGCCTGATTATCTTCCTCAT+TGG + chr1.4:51202009-51202028 MS.gene47397:CDS 40.0%
TGTTTAGGGGACAAGTTCTA+CGG + chr1.4:51202248-51202267 MS.gene47397:intron 40.0%
TTGTCAATGAGTGTAGGTGA+CGG - chr1.4:51205128-51205147 None:intergenic 40.0%
! GCCAGCAAAACCATTGTTTT+AGG - chr1.4:51203361-51203380 None:intergenic 40.0%
! GGTTTCGTTGGTTGAAATGT+GGG - chr1.4:51205198-51205217 None:intergenic 40.0%
! TGAACGGTATGGAATTTTCC+AGG + chr1.4:51200854-51200873 MS.gene47397:CDS 40.0%
! TGGTTTCGTTGGTTGAAATG+TGG - chr1.4:51205199-51205218 None:intergenic 40.0%
! TGTCAATGAGGTCTTATACC+CGG + chr1.4:51202371-51202390 MS.gene47397:intron 40.0%
!! AACAACATGATGGATGTGTG+TGG + chr1.4:51201840-51201859 MS.gene47397:CDS 40.0%
!! GTCAAGCAGCTAGTTGATAA+TGG + chr1.4:51200663-51200682 MS.gene47397:CDS 40.0%
!! TTGGCTTTGTCAATGAGTGT+AGG - chr1.4:51205134-51205153 None:intergenic 40.0%
!!! AAGTTGGGCCAACTTTTTTG+AGG - chr1.4:51202449-51202468 None:intergenic 40.0%
!!! GAAAGAGTTTTCTGGAGTCT+AGG + chr1.4:51205222-51205241 MS.gene47397:CDS 40.0%
AAAGAATGCCCGTAGGACAT+TGG - chr1.4:51202675-51202694 None:intergenic 45.0%
ACCACTACTTTCCATTTCCC+GGG - chr1.4:51202392-51202411 None:intergenic 45.0%
ATGAGAGCAGCAGTTCGATA+TGG + chr1.4:51201915-51201934 MS.gene47397:CDS 45.0%
CAAAGGCCGTATGAATCATC+AGG - chr1.4:51203383-51203402 None:intergenic 45.0%
CCCTCTTAACCAATGTCCTA+CGG + chr1.4:51202663-51202682 MS.gene47397:intron 45.0%
CCTCTTAACCAATGTCCTAC+GGG + chr1.4:51202664-51202683 MS.gene47397:intron 45.0%
CTCATTGTCACAGATGTGCT+TGG - chr1.4:51203193-51203212 None:intergenic 45.0%
CTTCTACCTCATCTTGGAGA+AGG - chr1.4:51203890-51203909 None:intergenic 45.0%
CTTCTCCAAGATGAGGTAGA+AGG + chr1.4:51203888-51203907 MS.gene47397:CDS 45.0%
GAACCGTGAACCATTGTTCT+TGG - chr1.4:51203929-51203948 None:intergenic 45.0%
GAAGATATCAAAGGGGTCGA+TGG + chr1.4:51200615-51200634 MS.gene47397:CDS 45.0%
GCAAACCTTCTACCTCATCT+TGG - chr1.4:51203896-51203915 None:intergenic 45.0%
GCTAATGCTTGTGAACGGTA+TGG + chr1.4:51200843-51200862 MS.gene47397:CDS 45.0%
GGACAAGTTCTACGGATAGT+TGG + chr1.4:51202256-51202275 MS.gene47397:intron 45.0%
GGCCAATGAGGAAGATAATC+AGG - chr1.4:51202014-51202033 None:intergenic 45.0%
GGTCAAACGCTACCTAAGTA+TGG + chr1.4:51202505-51202524 MS.gene47397:intron 45.0%
TGAAGAACTTGGGGCCTATT+TGG - chr1.4:51200816-51200835 None:intergenic 45.0%
TGATCACCTTGAGGTATGGA+TGG + chr1.4:51203983-51204002 MS.gene47397:intron 45.0%
TTCTTAGCAGGACGTTCAGA+AGG - chr1.4:51200723-51200742 None:intergenic 45.0%
TTTGTGGTTGATTGCTCACC+TGG - chr1.4:51200875-51200894 None:intergenic 45.0%
! CCGTAGGACATTGGTTAAGA+GGG - chr1.4:51202666-51202685 None:intergenic 45.0%
! GTCAATGAGGTCTTATACCC+GGG + chr1.4:51202372-51202391 MS.gene47397:intron 45.0%
! GTGTTTGGTTTCTTCTGCGT+AGG - chr1.4:51203673-51203692 None:intergenic 45.0%
! TGCTGGCCTGATGATTCATA+CGG + chr1.4:51203374-51203393 MS.gene47397:intron 45.0%
! TTGGTGATCACCTTGAGGTA+TGG + chr1.4:51203979-51203998 MS.gene47397:intron 45.0%
!! CAATGTTGGTGATCACCTTG+AGG + chr1.4:51203974-51203993 MS.gene47397:CDS 45.0%
!! TGTATAAATTAATAAAAATA+TGG + chr1.4:51201116-51201135 MS.gene47397:intron 5.0%
!! TTTATTTCATATAAAATTTA+TGG - chr1.4:51204679-51204698 None:intergenic 5.0%
!!! ATTAAAGTAAATAAATTTTT+GGG + chr1.4:51201139-51201158 MS.gene47397:intron 5.0%
!!! ATTATTTATATTTTTATGAT+AGG - chr1.4:51204611-51204630 None:intergenic 5.0%
ACCCGGGAAATGGAAAGTAG+TGG + chr1.4:51202388-51202407 MS.gene47397:intron 50.0%
AGATGGAAGCCAGCTTATGG+CGG + chr1.4:51203785-51203804 MS.gene47397:CDS 50.0%
ATGCCCCCTCATTCTGACTA+TGG + chr1.4:51203852-51203871 MS.gene47397:CDS 50.0%
CACACTCCTTCTCCAAGATG+AGG + chr1.4:51203881-51203900 MS.gene47397:CDS 50.0%
CTCAACCTGACCTAACCCTA+GGG + chr1.4:51203829-51203848 MS.gene47397:CDS 50.0%
CTGATTCACCCGTGGACTTA+AGG + chr1.4:51202033-51202052 MS.gene47397:CDS 50.0%
CTTAAGTCCACGGGTGAATC+AGG - chr1.4:51202035-51202054 None:intergenic 50.0%
GGAAGATGGAAGCCAGCTTA+TGG + chr1.4:51203782-51203801 MS.gene47397:CDS 50.0%
TTAGCAGGACGTTCAGAAGG+AGG - chr1.4:51200720-51200739 None:intergenic 50.0%
! ATCGGTGTCTGCGTAACGTT+TGG - chr1.4:51205159-51205178 None:intergenic 50.0%
! CATCTTGGAGAAGGAGTGTG+AGG - chr1.4:51203881-51203900 None:intergenic 50.0%
! CCCGTAGGACATTGGTTAAG+AGG - chr1.4:51202667-51202686 None:intergenic 50.0%
! GAGGTCTTATACCCGGGAAA+TGG + chr1.4:51202378-51202397 MS.gene47397:intron 50.0%
! GTCTGCGTAACGTTTGGGAT+TGG - chr1.4:51205153-51205172 None:intergenic 50.0%
! TCGGTGTCTGCGTAACGTTT+GGG - chr1.4:51205158-51205177 None:intergenic 50.0%
!! GTTAGGTCAGGTTGAGGACA+TGG - chr1.4:51203825-51203844 None:intergenic 50.0%
ACGGGTGAATCAGGCCAATG+AGG - chr1.4:51202026-51202045 None:intergenic 55.0%
CCTCAACCTGACCTAACCCT+AGG + chr1.4:51203828-51203847 MS.gene47397:CDS 55.0%
! CCTAGGGTTAGGTCAGGTTG+AGG - chr1.4:51203831-51203850 None:intergenic 55.0%
! TCATTGGCCTGATTCACCCG+TGG + chr1.4:51202025-51202044 MS.gene47397:CDS 55.0%
!! AGAATGAGGGGGCATCCCTA+GGG - chr1.4:51203847-51203866 None:intergenic 55.0%
!! AGGTCAGGTTGAGGACATGG+TGG - chr1.4:51203822-51203841 None:intergenic 55.0%
GGCATCCCTAGGGTTAGGTC+AGG - chr1.4:51203837-51203856 None:intergenic 60.0%
!! CAGAATGAGGGGGCATCCCT+AGG - chr1.4:51203848-51203867 None:intergenic 60.0%
!! GAGGGGGCATCCCTAGGGTT+AGG - chr1.4:51203842-51203861 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 51200588 51205274 51200588 ID=MS.gene47397
chr1.4 mRNA 51200588 51205274 51200588 ID=MS.gene47397.t1;Parent=MS.gene47397
chr1.4 exon 51200588 51200875 51200588 ID=MS.gene47397.t1.exon1;Parent=MS.gene47397.t1
chr1.4 CDS 51200588 51200875 51200588 ID=cds.MS.gene47397.t1;Parent=MS.gene47397.t1
chr1.4 exon 51201807 51202054 51201807 ID=MS.gene47397.t1.exon2;Parent=MS.gene47397.t1
chr1.4 CDS 51201807 51202054 51201807 ID=cds.MS.gene47397.t1;Parent=MS.gene47397.t1
chr1.4 exon 51203656 51203995 51203656 ID=MS.gene47397.t1.exon3;Parent=MS.gene47397.t1
chr1.4 CDS 51203656 51203995 51203656 ID=cds.MS.gene47397.t1;Parent=MS.gene47397.t1
chr1.4 exon 51205011 51205274 51205011 ID=MS.gene47397.t1.exon4;Parent=MS.gene47397.t1
chr1.4 CDS 51205011 51205274 51205011 ID=cds.MS.gene47397.t1;Parent=MS.gene47397.t1
Gene Sequence

>MS.gene47397

ATGTCAGCTGGAATGGCAATAGTTAGTGAAGATATCAAAGGGGTCGATGGTATAGAAAATCAATTTCTGAATGGAGTCAAGCAGCTAGTTGATAATGGACTTCACATGGTACCTAAAAAGTACATACTTCCTCCTTCTGAACGTCCTGCTAAGAATACAGAAGATTCAAATTTTGCCAAACAAAACCTACAACTACCAATAATAGATTTCTCTGATTTGATTGGTCCAAATAGGCCCCAAGTTCTTCAGTCATTAGCTAATGCTTGTGAACGGTATGGAATTTTCCAGGTGAGCAATCAACCACAAAACTTTCATATACTAACTAAGTTATAGTTTTCTCAAAAAAAAATAAATAAATAAATAACTTAGTTATGGTTAAACCTTATAAAAATATCGGTTAAATATGTTTCTAATTCTTATAAATTTATAATTTTTAAGTTTAGTTCGTACATTTTTTTTTCAAGTTTAGTCCTTATTTGCATTTATGGAATTAAATCCAAGAAGCCAAGAACTAAAACACTCATTTTTTGTATAAATTAATAAAAATATGGATTAAAGTAAATAAATTTTTGGGTAAACATGTTTTTGGTCCTTATAAAATTGAAAACTTTTAAGTTTAATCCTTACTTAATTTTAATAGTTTTTTTAGTACCTACAAAAAATATTTACATGTAATTTTAGTCCCTGCTAGGACAAAATTTCTTTAATTATCCTTAAACTCTTAAATTTTTGAATGATTTTTCTGAGACAAGTTTAGAACATTACAAAAGGTTCATTTACTAAAATTTAGAGTTTTTTTTAACATGAAATGAATTAAATATGAATTTTTTAAAACAACAAAAGTTTAAGATAAAAACAACAAAAATTTGGACCTAGAAATCAAATTTTGAAATGACTTTTTTGCGGAGAAACTTTTAGTAATGTTCTTAACACGTCTGCAAAAAATTGTTCAAAAACTTAACTTAATAAAGTCTCAATTTTATAGGGACCAAAAACATATTTAACCCTAAATTTTTTAATAGGATTAAATTTAATTTTTTTTAATTTTATAAAGACTAAAAATATATTTTATCTTAAAAATATTGCATGTTGCACTATAAAATGCAATTAGAAACGTCTATAAACACTTCAGTTTGTATAATTCAGCTTACTTTATTCAAAAAAGAGTTGACTTTAAAAGTATTGATTGAAAGTTTATTTTGTGTTTTGTTTGATAAAGGTGGTAAACCATGGAATCTCAGAAGATGTTATCAACAACATGATGGATGTGTGTGGAAGATTTTTTGATCTTCCATTTGAGGAAAGAGGTAAGTACATGACATCTGATATGAGAGCAGCAGTTCGATATGGAACAAGCTTTAGTCAAACAAAAGACAAAGTGTTCTGTTGGAGAGATTTCTTGAAACTCATCTGCCATCCTTTGCCTGATTATCTTCCTCATTGGCCTGATTCACCCGTGGACTTAAGGTGTGTATTTTAATTTGTATAACTATATATAATTAATCATTAATCAATTCAATCTCTACGTGGACAACATTTTTTAAAGTATAGTTTTTTTTTTGACAAACTTTTTTAAAGTATAGTTATAATCATAATCATATAATAAGTCCTGGTACTAATTTAATGAAGAGACAATTTGTGTTATTTGTGTATTATAATTTGTTTAGGGGACAAGTTCTACGGATAGTTGGTCCATTGTAAATGGATACCTAATAATTGTTCAAAATATTAACAAATAAATGTCACAAACTAAATCAACCAACTTTCTTAATTGGTACAAATTTGTCAATGAGGTCTTATACCCGGGAAATGGAAAGTAGTGGTAATATACTCCTTCTCTTTTAAAGTAGCTTCTATGCCTCAAAAAAGTTGGCCCAACTTCTACTTTTATTGTGTAGAAAAGTCATAAATAAGTCGGGTCAAACGCTACCTAAGTATGGAAATGCTAACAAATGCAGCACTTATTAAGGAAACAAAAAATAGTAATTTTATATTGAATTCAACAATTTTTTAACTTTTAAAAAATCAAATCTATCATTTTTCACTATTTCTCAATACAACATTTCTATTTTTTTCCCTCTTAACCAATGTCCTACGGGCATTCTTTAACATTTCCCTTAATGTATATATATACAATTTGTGTAAAATTATTACTCTCTCCGTTTCAAAATGAGTGTCGTTTTAGCAAAAAAAAAATTTGTTTTAAAATGAATGTCACTTGCACTTTTCAATGCAGAATTATTATTTAACTTCCAATTGTGTCCTCTAAATAATTGAGTGACACTACTTCTAAAGCATTATATCAATAATAAATAAGGTTAGTTTAGTAAAATTGTCATGTTTTACATAATTATCACATTTTTTAATTTGTGTATAAAAACTTTAAACGACACGTATTTTAAAAAGGATTGAGTACTAAATTGTTTTTTGTGTATAGATATATTCAATATAGATTTTTTTTTTATATTCAACAACAAATTAGTATATTTTTTTAAAGATACAAATTAGTGGTCTTAATTAGGTTATGTTTGGTAAAAGGAAATTAGTAGTCTTATTTGTGAAGTTTGAAATCTTAAAGGTTTTACATCTTTAATATGATTTTCCAAGCACATCTGTGACAATGAGTTAAGTATGATCTTGTAGAATTTTCCATCTGTTAGTAGAAGAAGAAAATATTGTATATATGCATGTTAAAAAATATTGTTGATATATCATCACTAGTACGTAATAATATATACATTTATACTTGTAAACAAAATACAAAATTTAACCTAAAACAATGGTTTTGCTGGCCTGATGATTCATACGGCCTTTGTAAGTATATCTACTAATTTGATAGGAAACTTATATGACAATGTTTTTTTGTCAATGAATATAGTGACGATTCCCTAAAAAAATTGAATATAGGGACGATGAATACTCTATTTTATATTTTTTGTCTATATTTTTTTTTCTCTTTTCTATATCTCTCTGGGCATGATGACATGACACATTTATCTTTTATTTTTCTCCTCAACAATTACAATATAGTATGTTTGTCTTATTCTTGATTTTTAATTAAAATGTAGGAAAGTGGCGGCTACCTACGCAGAAGAAACCAAACACTTATTTCTAAGGTTAATGGAAGCCATAGTAGAGAGTTTAGGTATAGTTGAAGCCAACAAAGAAGAAAAGGACAATATTATCAAAGAATTGGAAGATGGAAGCCAGCTTATGGCGGCAAATTTTTATCCACCATGTCCTCAACCTGACCTAACCCTAGGGATGCCCCCTCATTCTGACTATGGATTCCTCACACTCCTTCTCCAAGATGAGGTAGAAGGTTTGCAAGTCCAATTCCAAGAACAATGGTTCACGGTTCAACCTATTAATAATGCATTCGTTGTCAATGTTGGTGATCACCTTGAGGTATGGATGGATATTCCATTAGTTAGTTGTAAGTTTAATGGAACAATTTAAATAAGTTTTTATGTATATTTTAAATTATACTATGTCACTATATCGTTTTATATTGCTAAATTATTATCATATTTATAGTAATCAGATATCATATAATTGGTTAAAAAAATAATCAGATATCATATAATTAAATCAACATAAAACAATAAACTCTCATGGCAATTTAAGATGACAGAGAATTCATGAAGTATTAATGAAAATGATATTTCAAATTATGAAATTCTGATATTGCAATGGTAGATTCTTTAGTTTTGTCTTAACTAATAGGTTGAAGAGAATTTTGTTCCTGTCATCTACAATTAGTGACCATAACGATTTATTTATAGAGAAATGATATATGTAATCATTTTTGGGACAACTTTTAGGACAACATTTTCTTCTTTATTCTTTTGGGACAAAACACTAGAGAGAGAAAGAGGGAGAGTAAACATGATGAGAGTATAAAAGAGAGAGTTTTTCCAAAATAAGTTTGTACCAATATAATTTATCTTGTTATATATGAGTCATATATCATATCACGAAGAGACATAACTATCAAATTTTTATCATTTTCTATTTCTACCTATCATAAAAATATAAATAATATTTATGCCATCTACACATATTTTTTAAGATAATTATATTTTTCACCATAAATTTTATATGAAATAAATCATTTTAATTTAATTAATAAATTATATAATATGGCCCTACACATTTAAATATTACATTTTTTTTAAAGAACATTTAAATATTACATGTGTTCCAAAATTTCTAACAACAAAGCAAACTTATCTTACCATTGAGTTAAAATGGCATGGAAGAGTATTTATTGATCGAACAACAAATAAAATTTATAAATACAAAATTAAGTGTGAACTGTGAAGAGAAATTATTTAAATTTCATTTTGACGTATGTGTCAAAAAGTCATGTTGATATATCCTATTTAAGTTGCTAATTCTTCTTTGTATCTGTGCTTCTCAGATTTTTAGCAACGGGAAATACAAGAGTGTGCTACATAGGGTTCTAGTGAATTCAAGTAAGCGTAGAAGATCCATTGCTTCATTGCATAGCATTTCGTTCAACAGTACTGTGAGACCGTCACCTACACTCATTGACAAAGCCAATCCCAAACGTTACGCAGACACCGATTTTGAAACTTTTCTTGCCCACATTTCAACCAACGAAACCAAGAGAAAGAGTTTTCTGGAGTCTAGGAAATTGACTTCTATCTCAGTACTTGACTAA
Protein sequence

>MS.gene47397.t1

MSAGMAIVSEDIKGVDGIENQFLNGVKQLVDNGLHMVPKKYILPPSERPAKNTEDSNFAKQNLQLPIIDFSDLIGPNRPQVLQSLANACERYGIFQVVNHGISEDVINNMMDVCGRFFDLPFEERGKYMTSDMRAAVRYGTSFSQTKDKVFCWRDFLKLICHPLPDYLPHWPDSPVDLRKVAATYAEETKHLFLRLMEAIVESLGIVEANKEEKDNIIKELEDGSQLMAANFYPPCPQPDLTLGMPPHSDYGFLTLLLQDEVEGLQVQFQEQWFTVQPINNAFVVNVGDHLEIFSNGKYKSVLHRVLVNSSKRRRSIASLHSISFNSTVRPSPTLIDKANPKRYADTDFETFLAHISTNETKRKSFLESRKLTSISVLD