Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068333.t1 | RHN39735.1 | 97.3 | 588 | 16 | 0 | 1 | 588 | 1 | 588 | 0.00E+00 | 1144.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068333.t1 | Q9LD40 | 61.8 | 597 | 196 | 6 | 9 | 586 | 9 | 592 | 2.2e-204 | 713.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068333.t1 | A0A396GM34 | 97.3 | 588 | 16 | 0 | 1 | 588 | 1 | 588 | 0.0e+00 | 1144.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055356 | MS.gene068333 | 0.81123 | 7.77E-51 | -1.69E-46 |
MS.gene055357 | MS.gene068333 | 0.812188 | 4.81E-51 | -1.69E-46 |
MS.gene055358 | MS.gene068333 | 0.829917 | 3.94E-55 | -1.69E-46 |
MS.gene056953 | MS.gene068333 | 0.810602 | 1.06E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068333.t1 | MTR_8g027755 | 95.918 | 588 | 24 | 0 | 1 | 588 | 26 | 613 | 0.0 | 1174 |
MS.gene068333.t1 | MTR_7g117310 | 68.506 | 616 | 159 | 4 | 1 | 588 | 1 | 609 | 0.0 | 843 |
MS.gene068333.t1 | MTR_7g117310 | 68.506 | 616 | 159 | 4 | 1 | 588 | 13 | 621 | 0.0 | 843 |
MS.gene068333.t1 | MTR_7g117310 | 73.056 | 553 | 147 | 1 | 36 | 588 | 5 | 555 | 0.0 | 827 |
MS.gene068333.t1 | MTR_3g091080 | 62.153 | 613 | 196 | 6 | 1 | 587 | 1 | 603 | 0.0 | 756 |
MS.gene068333.t1 | MTR_1g028370 | 61.349 | 608 | 204 | 6 | 4 | 587 | 5 | 605 | 0.0 | 743 |
MS.gene068333.t1 | MTR_4g130820 | 54.393 | 535 | 237 | 4 | 56 | 587 | 95 | 625 | 0.0 | 614 |
MS.gene068333.t1 | MTR_4g058730 | 51.337 | 561 | 256 | 6 | 33 | 587 | 32 | 581 | 0.0 | 589 |
MS.gene068333.t1 | MTR_2g094860 | 53.137 | 542 | 245 | 4 | 48 | 587 | 65 | 599 | 0.0 | 588 |
MS.gene068333.t1 | MTR_2g460590 | 52.407 | 540 | 242 | 6 | 57 | 587 | 40 | 573 | 0.0 | 579 |
MS.gene068333.t1 | MTR_1g064240 | 47.761 | 603 | 289 | 9 | 1 | 587 | 1 | 593 | 0.0 | 563 |
MS.gene068333.t1 | MTR_7g034605 | 48.027 | 583 | 281 | 7 | 28 | 597 | 10 | 583 | 0.0 | 561 |
MS.gene068333.t1 | MTR_3g109030 | 50.558 | 538 | 249 | 5 | 60 | 587 | 73 | 603 | 0.0 | 559 |
MS.gene068333.t1 | MTR_3g088875 | 49.088 | 548 | 261 | 5 | 60 | 597 | 36 | 575 | 0.0 | 543 |
MS.gene068333.t1 | MTR_6g477760 | 38.532 | 545 | 306 | 10 | 59 | 586 | 122 | 654 | 1.01e-115 | 360 |
MS.gene068333.t1 | MTR_6g075290 | 38.182 | 550 | 312 | 9 | 60 | 595 | 193 | 728 | 5.83e-111 | 350 |
MS.gene068333.t1 | MTR_5g007630 | 36.697 | 545 | 307 | 12 | 59 | 588 | 171 | 692 | 1.16e-105 | 335 |
MS.gene068333.t1 | MTR_8g464570 | 34.909 | 550 | 315 | 13 | 59 | 585 | 61 | 590 | 5.81e-102 | 323 |
MS.gene068333.t1 | MTR_6g075440 | 35.337 | 549 | 315 | 13 | 60 | 588 | 169 | 697 | 8.45e-100 | 320 |
MS.gene068333.t1 | MTR_6g075440 | 35.337 | 549 | 315 | 13 | 60 | 588 | 169 | 697 | 1.42e-99 | 320 |
MS.gene068333.t1 | MTR_6g075290 | 38.356 | 511 | 285 | 9 | 100 | 595 | 31 | 526 | 2.93e-98 | 311 |
MS.gene068333.t1 | MTR_6g075290 | 37.838 | 518 | 290 | 10 | 94 | 595 | 186 | 687 | 1.00e-96 | 311 |
MS.gene068333.t1 | MTR_2g081110 | 33.514 | 552 | 335 | 12 | 53 | 585 | 48 | 586 | 1.15e-95 | 307 |
MS.gene068333.t1 | MTR_7g012260 | 34.342 | 562 | 335 | 12 | 44 | 585 | 91 | 638 | 4.75e-90 | 293 |
MS.gene068333.t1 | MTR_6g075390 | 33.818 | 550 | 319 | 11 | 60 | 588 | 115 | 640 | 1.62e-89 | 291 |
MS.gene068333.t1 | MTR_6g075410 | 30.341 | 557 | 342 | 13 | 56 | 588 | 89 | 623 | 4.98e-74 | 249 |
MS.gene068333.t1 | MTR_6g076060 | 34.266 | 429 | 248 | 11 | 177 | 588 | 14 | 425 | 4.11e-58 | 203 |
MS.gene068333.t1 | MTR_2g094810 | 51.376 | 109 | 53 | 0 | 139 | 247 | 12 | 120 | 5.97e-29 | 111 |
MS.gene068333.t1 | MTR_6g075320 | 37.931 | 116 | 72 | 0 | 62 | 177 | 151 | 266 | 1.48e-24 | 104 |
MS.gene068333.t1 | MTR_4g113530 | 21.678 | 429 | 260 | 8 | 113 | 539 | 87 | 441 | 1.69e-22 | 102 |
MS.gene068333.t1 | MTR_2g006870 | 25.397 | 315 | 197 | 8 | 242 | 539 | 169 | 462 | 1.25e-17 | 87.4 |
MS.gene068333.t1 | MTR_3g108320 | 23.474 | 213 | 155 | 3 | 332 | 539 | 233 | 442 | 2.20e-14 | 76.6 |
MS.gene068333.t1 | MTR_3g108320 | 23.474 | 213 | 155 | 3 | 332 | 539 | 233 | 442 | 2.42e-14 | 76.3 |
MS.gene068333.t1 | MTR_3g108320 | 23.474 | 213 | 155 | 3 | 332 | 539 | 233 | 442 | 2.43e-14 | 76.6 |
MS.gene068333.t1 | MTR_1g011755 | 25.946 | 185 | 135 | 2 | 342 | 524 | 249 | 433 | 3.18e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068333.t1 | AT4G01010 | 62.709 | 598 | 191 | 6 | 9 | 587 | 9 | 593 | 0.0 | 760 |
MS.gene068333.t1 | AT4G01010 | 62.709 | 598 | 191 | 6 | 9 | 587 | 9 | 593 | 0.0 | 760 |
MS.gene068333.t1 | AT5G53130 | 62.582 | 612 | 197 | 8 | 1 | 587 | 1 | 605 | 0.0 | 757 |
MS.gene068333.t1 | AT1G01340 | 64.388 | 556 | 193 | 3 | 32 | 587 | 42 | 592 | 0.0 | 746 |
MS.gene068333.t1 | AT1G01340 | 64.388 | 556 | 193 | 3 | 32 | 587 | 37 | 587 | 0.0 | 746 |
MS.gene068333.t1 | AT2G46430 | 56.933 | 613 | 218 | 8 | 1 | 587 | 2 | 594 | 0.0 | 674 |
MS.gene068333.t1 | AT2G46430 | 56.933 | 613 | 218 | 8 | 1 | 587 | 2 | 594 | 0.0 | 674 |
MS.gene068333.t1 | AT2G23980 | 54.430 | 553 | 241 | 4 | 41 | 587 | 86 | 633 | 0.0 | 639 |
MS.gene068333.t1 | AT2G23980 | 54.430 | 553 | 241 | 4 | 41 | 587 | 86 | 633 | 0.0 | 639 |
MS.gene068333.t1 | AT2G23980 | 54.430 | 553 | 241 | 4 | 41 | 587 | 59 | 606 | 0.0 | 639 |
MS.gene068333.t1 | AT2G23980 | 54.430 | 553 | 241 | 4 | 41 | 587 | 86 | 633 | 0.0 | 639 |
MS.gene068333.t1 | AT2G23980 | 54.430 | 553 | 241 | 4 | 41 | 587 | 86 | 633 | 0.0 | 639 |
MS.gene068333.t1 | AT2G23980 | 54.430 | 553 | 241 | 4 | 41 | 587 | 86 | 633 | 0.0 | 639 |
MS.gene068333.t1 | AT4G30560 | 55.288 | 539 | 229 | 5 | 56 | 587 | 99 | 632 | 0.0 | 627 |
MS.gene068333.t1 | AT4G30560 | 55.288 | 539 | 229 | 5 | 56 | 587 | 73 | 606 | 0.0 | 627 |
MS.gene068333.t1 | AT4G30560 | 55.288 | 539 | 229 | 5 | 56 | 587 | 73 | 606 | 0.0 | 627 |
MS.gene068333.t1 | AT4G30560 | 55.288 | 539 | 229 | 5 | 56 | 587 | 73 | 606 | 0.0 | 627 |
MS.gene068333.t1 | AT4G30560 | 55.288 | 539 | 229 | 5 | 56 | 587 | 99 | 632 | 0.0 | 627 |
MS.gene068333.t1 | AT2G23980 | 52.431 | 576 | 240 | 5 | 41 | 587 | 86 | 656 | 0.0 | 627 |
MS.gene068333.t1 | AT2G23980 | 52.431 | 576 | 240 | 5 | 41 | 587 | 86 | 656 | 0.0 | 627 |
MS.gene068333.t1 | AT2G23980 | 52.431 | 576 | 240 | 5 | 41 | 587 | 86 | 656 | 0.0 | 627 |
MS.gene068333.t1 | AT2G23980 | 52.431 | 576 | 240 | 5 | 41 | 587 | 86 | 656 | 0.0 | 627 |
MS.gene068333.t1 | AT5G57940 | 51.290 | 620 | 266 | 7 | 1 | 587 | 1 | 617 | 0.0 | 622 |
MS.gene068333.t1 | AT5G57940 | 51.290 | 620 | 266 | 7 | 1 | 587 | 1 | 617 | 0.0 | 622 |
MS.gene068333.t1 | AT5G57940 | 55.680 | 537 | 230 | 3 | 56 | 587 | 77 | 610 | 0.0 | 621 |
MS.gene068333.t1 | AT1G19780 | 54.344 | 541 | 232 | 4 | 56 | 587 | 93 | 627 | 0.0 | 617 |
MS.gene068333.t1 | AT1G15990 | 49.759 | 623 | 269 | 9 | 1 | 587 | 7 | 621 | 0.0 | 616 |
MS.gene068333.t1 | AT2G28260 | 53.663 | 546 | 234 | 7 | 48 | 587 | 18 | 550 | 0.0 | 585 |
MS.gene068333.t1 | AT2G28260 | 53.663 | 546 | 234 | 7 | 48 | 587 | 58 | 590 | 0.0 | 585 |
MS.gene068333.t1 | AT2G24610 | 49.913 | 573 | 253 | 7 | 39 | 587 | 38 | 600 | 0.0 | 565 |
MS.gene068333.t1 | AT2G24610 | 49.913 | 573 | 253 | 7 | 39 | 587 | 53 | 615 | 0.0 | 564 |
MS.gene068333.t1 | AT4G30360 | 50.551 | 544 | 241 | 7 | 59 | 587 | 70 | 600 | 0.0 | 552 |
MS.gene068333.t1 | AT5G14870 | 49.254 | 536 | 263 | 4 | 57 | 587 | 37 | 568 | 0.0 | 546 |
MS.gene068333.t1 | AT3G48010 | 48.435 | 543 | 261 | 6 | 57 | 587 | 41 | 576 | 0.0 | 540 |
MS.gene068333.t1 | AT2G46440 | 52.199 | 523 | 240 | 6 | 68 | 587 | 37 | 552 | 7.29e-176 | 512 |
MS.gene068333.t1 | AT2G46450 | 49.237 | 524 | 250 | 6 | 68 | 587 | 37 | 548 | 4.38e-170 | 499 |
MS.gene068333.t1 | AT2G46450 | 49.237 | 524 | 250 | 6 | 68 | 587 | 37 | 548 | 4.38e-170 | 499 |
MS.gene068333.t1 | AT1G19780 | 54.869 | 421 | 175 | 4 | 176 | 587 | 2 | 416 | 1.96e-160 | 470 |
MS.gene068333.t1 | AT2G46450 | 47.328 | 524 | 237 | 7 | 68 | 587 | 24 | 512 | 6.28e-158 | 466 |
MS.gene068333.t1 | AT2G46450 | 47.328 | 524 | 237 | 7 | 68 | 587 | 37 | 525 | 7.21e-158 | 466 |
MS.gene068333.t1 | AT2G46440 | 56.085 | 378 | 159 | 5 | 213 | 587 | 1 | 374 | 1.45e-130 | 390 |
MS.gene068333.t1 | AT3G17690 | 35.443 | 553 | 327 | 10 | 57 | 595 | 153 | 689 | 1.37e-109 | 345 |
MS.gene068333.t1 | AT3G17700 | 36.667 | 540 | 317 | 8 | 60 | 588 | 192 | 717 | 1.84e-106 | 338 |
MS.gene068333.t1 | AT3G17690 | 35.887 | 496 | 296 | 8 | 57 | 546 | 153 | 632 | 8.68e-104 | 327 |
MS.gene068333.t1 | AT3G17700 | 36.714 | 493 | 297 | 6 | 59 | 550 | 191 | 669 | 5.08e-101 | 322 |
MS.gene068333.t1 | AT5G15410 | 34.935 | 541 | 330 | 9 | 60 | 585 | 112 | 645 | 6.61e-95 | 306 |
MS.gene068333.t1 | AT5G15410 | 34.935 | 541 | 330 | 9 | 60 | 585 | 113 | 646 | 7.84e-95 | 306 |
MS.gene068333.t1 | AT5G54250 | 33.764 | 542 | 334 | 11 | 60 | 585 | 79 | 611 | 4.15e-94 | 303 |
MS.gene068333.t1 | AT5G54250 | 33.764 | 542 | 334 | 11 | 60 | 585 | 79 | 611 | 4.15e-94 | 303 |
MS.gene068333.t1 | AT5G54250 | 33.764 | 542 | 334 | 11 | 60 | 585 | 79 | 611 | 4.15e-94 | 303 |
MS.gene068333.t1 | AT5G54250 | 33.210 | 542 | 332 | 12 | 60 | 585 | 79 | 606 | 5.13e-89 | 290 |
MS.gene068333.t1 | AT3G17690 | 32.708 | 373 | 236 | 6 | 57 | 423 | 153 | 516 | 7.92e-66 | 224 |
MS.gene068333.t1 | AT2G26650 | 21.149 | 435 | 258 | 10 | 108 | 539 | 89 | 441 | 7.22e-17 | 85.1 |
MS.gene068333.t1 | AT2G26650 | 20.812 | 394 | 236 | 8 | 149 | 539 | 16 | 336 | 2.26e-14 | 77.0 |
MS.gene068333.t1 | AT4G22200 | 24.402 | 209 | 155 | 2 | 331 | 539 | 258 | 463 | 2.86e-14 | 76.3 |
MS.gene068333.t1 | AT4G22200 | 24.402 | 209 | 155 | 2 | 331 | 539 | 258 | 463 | 6.37e-14 | 75.5 |
Find 103 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTAATAAGACGTCGAAAT+TGG | 0.155059 | 8.3:-66307248 | None:intergenic |
AACCAATCCTTTGTTATATA+TGG | 0.163608 | 8.3:-66305184 | None:intergenic |
ATGTCTCTTCTCAGATCTTT+AGG | 0.165544 | 8.3:-66306759 | None:intergenic |
GCCATCTTCATTGCTGTCTT+TGG | 0.168736 | 8.3:+66306135 | MS.gene068333:CDS |
AAAGATCCTGATGATATTAT+TGG | 0.173184 | 8.3:+66305633 | MS.gene068333:CDS |
GTTCTATTTGCATTACTTAT+AGG | 0.188738 | 8.3:+66306162 | MS.gene068333:CDS |
GGTGGGGTTTGCGCAATTTA+AGG | 0.199611 | 8.3:+66305754 | MS.gene068333:CDS |
TCAATGTTCCATTCAAATTA+AGG | 0.206765 | 8.3:-66304583 | None:intergenic |
CAACATGGATAAACAGTTAT+TGG | 0.216957 | 8.3:+66306912 | MS.gene068333:CDS |
ATAAATTCTTCTACTGCTTT+TGG | 0.244483 | 8.3:+66305733 | MS.gene068333:CDS |
CAATATAAGTGCTTGTCTTT+AGG | 0.254034 | 8.3:-66306098 | None:intergenic |
ATTAGGTTGTTGGAGCATTT+TGG | 0.256130 | 8.3:+66305466 | MS.gene068333:intron |
TGTCTCTTCTCAGATCTTTA+GGG | 0.276896 | 8.3:-66306758 | None:intergenic |
CTAAAGACAAGCACTTATAT+TGG | 0.307924 | 8.3:+66306099 | MS.gene068333:CDS |
CAATATGATTCTTCAATTGA+TGG | 0.309646 | 8.3:+66304353 | MS.gene068333:CDS |
TAAAGACAAGCACTTATATT+GGG | 0.329170 | 8.3:+66306100 | MS.gene068333:CDS |
TTCTGTCCAGATTTGAAGAT+TGG | 0.337475 | 8.3:+66304300 | MS.gene068333:intron |
CTTCATTGCTGTCTTTGGAT+TGG | 0.340867 | 8.3:+66306140 | MS.gene068333:CDS |
GGAACTGAGCCTTGTGGAAT+TGG | 0.348268 | 8.3:-66305163 | None:intergenic |
TCAACTGTACTAGTCGAAAT+AGG | 0.351889 | 8.3:-66307165 | None:intergenic |
ACAGGGATGTAAAAGAATAA+TGG | 0.368359 | 8.3:-66304539 | None:intergenic |
ATGTGTGATGGCAGTATCTA+TGG | 0.374144 | 8.3:+66304514 | MS.gene068333:CDS |
ATCGTCTTTCAGTTTCGAAC+CGG | 0.379722 | 8.3:+66304659 | MS.gene068333:CDS |
TAGAATCAGAGTTGCGTTGT+TGG | 0.383396 | 8.3:+66305502 | MS.gene068333:CDS |
GGAAAATGCCTTAATTTGAA+TGG | 0.384868 | 8.3:+66304575 | MS.gene068333:CDS |
GGTAAGTTTGAAGAGGTTGT+AGG | 0.390125 | 8.3:-66307144 | None:intergenic |
GTTAATAAGACGTCGAAATT+GGG | 0.397762 | 8.3:-66307247 | None:intergenic |
ATCAATTCTTCCACTTCCTC+AGG | 0.406342 | 8.3:+66304787 | MS.gene068333:CDS |
CATCCCTGTGATTGATGACC+AGG | 0.414426 | 8.3:+66304553 | MS.gene068333:CDS |
TATTTGTGATATTAGGTTGT+TGG | 0.424525 | 8.3:+66305456 | MS.gene068333:intron |
AAGGTCCACTACTTCAGAAA+TGG | 0.424933 | 8.3:+66304471 | MS.gene068333:CDS |
ACAACAAATGGTGGAAGAAC+TGG | 0.427072 | 8.3:+66307051 | MS.gene068333:CDS |
CCTATAAATCATGAGTCAAC+AGG | 0.429084 | 8.3:+66303815 | None:intergenic |
GGAGCTTCTAACATGGGCCT+TGG | 0.434189 | 8.3:+66307119 | MS.gene068333:CDS |
ATTCCAAAATTGAAAACTGT+TGG | 0.436075 | 8.3:-66305657 | None:intergenic |
CTTAAGACCGCCACAACAAA+TGG | 0.436296 | 8.3:+66307039 | MS.gene068333:CDS |
TTCCAAAATTGAAAACTGTT+GGG | 0.439910 | 8.3:-66305656 | None:intergenic |
AATGAAGTAACAAGCACTTC+TGG | 0.448752 | 8.3:+66305265 | MS.gene068333:CDS |
TATCTCATTGCTATAGCAAA+AGG | 0.451371 | 8.3:-66304734 | None:intergenic |
GACGGTATGAACAATACAAA+TGG | 0.472315 | 8.3:+66306691 | MS.gene068333:CDS |
GTATAGATTCGCATGAGTCT+TGG | 0.472590 | 8.3:-66305235 | None:intergenic |
TTGAAGAGATGAGAATCAAA+AGG | 0.475729 | 8.3:+66306607 | MS.gene068333:CDS |
ATTCTTTGCTTCAAGTGATC+CGG | 0.484052 | 8.3:-66306666 | None:intergenic |
ATTCCTTGCAATGGAGGACA+TGG | 0.488633 | 8.3:+66307694 | MS.gene068333:CDS |
ATGAAGAGCATTTCGTCCAC+TGG | 0.491546 | 8.3:-66307003 | None:intergenic |
TTGTTCCATTTCTGAAGTAG+TGG | 0.494112 | 8.3:-66304476 | None:intergenic |
TTCCATATATAACAAAGGAT+TGG | 0.506157 | 8.3:+66305182 | MS.gene068333:CDS |
TCGTCTTTCAGTTTCGAACC+GGG | 0.507612 | 8.3:+66304660 | MS.gene068333:CDS |
GTTGGGCCAATAATATCATC+AGG | 0.511144 | 8.3:-66305639 | None:intergenic |
AACTGGTTTCTTTAACTCGA+CGG | 0.515613 | 8.3:+66307068 | MS.gene068333:CDS |
ATAGCAAAAGGATCATCAAC+CGG | 0.516589 | 8.3:-66304722 | None:intergenic |
CGAAATAGGTAAGTTTGAAG+AGG | 0.517146 | 8.3:-66307151 | None:intergenic |
TATTCTGATACCTGAGGAAG+TGG | 0.517630 | 8.3:-66304797 | None:intergenic |
GAGTCGTCCGCAGCTCAGAT+AGG | 0.517792 | 8.3:-66305562 | None:intergenic |
TTTCCCTGGTCATCAATCAC+AGG | 0.520770 | 8.3:-66304557 | None:intergenic |
TTAACTGAGACAGCATGGGC+TGG | 0.523523 | 8.3:+66305292 | MS.gene068333:CDS |
TCCAAAGACAGCAATGAAGA+TGG | 0.529263 | 8.3:-66306136 | None:intergenic |
ATATCATCAGGATCTTTGTA+AGG | 0.531313 | 8.3:-66305627 | None:intergenic |
AAAAGTTTCGTTGTTTGTGA+AGG | 0.533061 | 8.3:+66306976 | MS.gene068333:CDS |
TGCTCTAACGTCTCGTGTGG+TGG | 0.535752 | 8.3:+66305689 | MS.gene068333:CDS |
CTCTTCTCAGATCTTTAGGG+AGG | 0.541922 | 8.3:-66306755 | None:intergenic |
TTCTGAAGTAGTGGACCTTG+TGG | 0.543372 | 8.3:-66304467 | None:intergenic |
CTCTCATGCATGATGACTTG+AGG | 0.543393 | 8.3:+66307214 | MS.gene068333:CDS |
CTTTAACTCGACGGAACTCA+AGG | 0.546626 | 8.3:+66307077 | MS.gene068333:CDS |
AGATAGGAATCATCAAAGAA+TGG | 0.547757 | 8.3:-66305546 | None:intergenic |
AAGAGATGAGAATCAAAAGG+AGG | 0.548051 | 8.3:+66306610 | MS.gene068333:CDS |
AGTTCTTCCACCATTTGTTG+TGG | 0.548081 | 8.3:-66307049 | None:intergenic |
GATGTGCCACCGTATGCTAC+CGG | 0.552256 | 8.3:+66306647 | MS.gene068333:CDS |
TCCTTGCAATGGAGGACATG+GGG | 0.558163 | 8.3:+66307696 | MS.gene068333:CDS |
AGAGATGAGAATCAAAAGGA+GGG | 0.561003 | 8.3:+66306611 | MS.gene068333:CDS |
TGAAGAGGTTGTAGGATCCA+AGG | 0.563224 | 8.3:-66307136 | None:intergenic |
TCAAGTGATCCGGTAGCATA+CGG | 0.569335 | 8.3:-66306656 | None:intergenic |
AACTCGACGGAACTCAAGGC+TGG | 0.573776 | 8.3:+66307081 | MS.gene068333:CDS |
TTCCTTGCAATGGAGGACAT+GGG | 0.577231 | 8.3:+66307695 | MS.gene068333:CDS |
TCCCCATGTCCTCCATTGCA+AGG | 0.577850 | 8.3:-66307697 | None:intergenic |
GTGGAGAGGAGCTTCTAACA+TGG | 0.578654 | 8.3:+66307112 | MS.gene068333:CDS |
ATTACTTATAGGAAACATGC+AGG | 0.580930 | 8.3:+66306173 | MS.gene068333:CDS |
TCTTCCACCATTTGTTGTGG+CGG | 0.589608 | 8.3:-66307046 | None:intergenic |
CTCAGTTCCATATATAACAA+AGG | 0.591567 | 8.3:+66305177 | MS.gene068333:CDS |
AGAACACTACACCTAGAAGC+TGG | 0.593927 | 8.3:-66304440 | None:intergenic |
AAAGGAGGGATGCAGAACAA+TGG | 0.601963 | 8.3:+66306625 | MS.gene068333:CDS |
GTATATTAACTGAGACAGCA+TGG | 0.602058 | 8.3:+66305287 | MS.gene068333:CDS |
AACAGGAAAAGAAATTTGTG+AGG | 0.603171 | 8.3:+66303832 | MS.gene068333:CDS |
CGAAGAAGGTGCAATAAACC+CGG | 0.603746 | 8.3:-66304678 | None:intergenic |
TGGAGAGGAGCTTCTAACAT+GGG | 0.608318 | 8.3:+66307113 | MS.gene068333:CDS |
TTCCCTGGTCATCAATCACA+GGG | 0.611426 | 8.3:-66304556 | None:intergenic |
GATGATTCCTATCTGAGCTG+CGG | 0.614958 | 8.3:+66305555 | MS.gene068333:CDS |
TATATTAACTGAGACAGCAT+GGG | 0.622764 | 8.3:+66305288 | MS.gene068333:CDS |
AATGGAGGACATGGGGAGCG+CGG | 0.630933 | 8.3:+66307703 | MS.gene068333:CDS |
CTTTGTTATAACATGTGTGA+TGG | 0.634441 | 8.3:+66304502 | MS.gene068333:CDS |
AAAGACAAGCACTTATATTG+GGG | 0.638169 | 8.3:+66306101 | MS.gene068333:CDS |
AATGTGTGATAAACTGAAGC+CGG | 0.650306 | 8.3:+66306939 | MS.gene068333:CDS |
ACTTGAAGCAAAGAATTCGA+CGG | 0.656032 | 8.3:+66306673 | MS.gene068333:CDS |
AAGACCGCCACAACAAATGG+TGG | 0.660390 | 8.3:+66307042 | MS.gene068333:CDS |
GCAATGATTCCAATTCCACA+AGG | 0.673079 | 8.3:+66305154 | MS.gene068333:CDS |
TGATGCTCTAACGTCTCGTG+TGG | 0.679720 | 8.3:+66305686 | MS.gene068333:CDS |
TGTTTGTGAAGGTGATCCAG+TGG | 0.682601 | 8.3:+66306987 | MS.gene068333:CDS |
ATCCCTGTGATTGATGACCA+GGG | 0.686356 | 8.3:+66304554 | MS.gene068333:CDS |
TACAAATGGCAAGAAAATCG+AGG | 0.692084 | 8.3:+66306705 | MS.gene068333:CDS |
GAAATGCTCTTCATCATGCG+CGG | 0.701329 | 8.3:+66307012 | MS.gene068333:CDS |
TGTAGTGTTCTTGATCCACA+AGG | 0.708088 | 8.3:+66304452 | MS.gene068333:CDS |
ATATATGGAACTGAGCCTTG+TGG | 0.739194 | 8.3:-66305169 | None:intergenic |
AGTGATCCGGTAGCATACGG+TGG | 0.739209 | 8.3:-66306653 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTTAATTAAACTGAAAT+TGG | - | chr8.3:66305072-66305091 | None:intergenic | 10.0% |
!! | AATTTACATTATAAGAAACA+AGG | + | chr8.3:66307357-66307376 | MS.gene068333:intron | 15.0% |
!! | TAAGTTACCAATATATTAAA+AGG | + | chr8.3:66304914-66304933 | MS.gene068333:intron | 15.0% |
!!! | AGTATTTTTATTACTATATG+AGG | + | chr8.3:66307578-66307597 | MS.gene068333:intron | 15.0% |
!!! | TCAACATTTTAGATTTTAAA+AGG | - | chr8.3:66304040-66304059 | None:intergenic | 15.0% |
!! | AAAATAGAAGAAAGACAATA+TGG | + | chr8.3:66307633-66307652 | MS.gene068333:intron | 20.0% |
!! | AAATTGAAAAATAACCAACT+AGG | - | chr8.3:66304225-66304244 | None:intergenic | 20.0% |
!! | ACCTAATATCACAAATAATT+TGG | - | chr8.3:66305453-66305472 | None:intergenic | 20.0% |
!! | AGCAAAAAATAATGAAACAT+TGG | + | chr8.3:66304412-66304431 | MS.gene068333:CDS | 20.0% |
!! | TAAGAACTTATACAAATGTT+TGG | - | chr8.3:66305925-66305944 | None:intergenic | 20.0% |
!! | TCCAAATTATTTGTGATATT+AGG | + | chr8.3:66305449-66305468 | MS.gene068333:intron | 20.0% |
!!! | AAGTTCACCTTTTAATATAT+TGG | - | chr8.3:66304924-66304943 | None:intergenic | 20.0% |
!!! | AATGTTTCATTATTTTTTGC+TGG | - | chr8.3:66304413-66304432 | None:intergenic | 20.0% |
!!! | ATATCTTGTTTACTTAAGTA+AGG | - | chr8.3:66306402-66306421 | None:intergenic | 20.0% |
!!! | TTCATACTTTTCTATGTTAT+CGG | - | chr8.3:66307480-66307499 | None:intergenic | 20.0% |
!!! | TTTTCTACAAAAACGAAATT+GGG | - | chr8.3:66307337-66307356 | None:intergenic | 20.0% |
!!! | TTTTTCTACAAAAACGAAAT+TGG | - | chr8.3:66307338-66307357 | None:intergenic | 20.0% |
! | AAAACTTAGCTTAGTAAACA+AGG | - | chr8.3:66305409-66305428 | None:intergenic | 25.0% |
! | AAACACTGCAAATAAAGTTA+AGG | - | chr8.3:66305972-66305991 | None:intergenic | 25.0% |
! | AAAGATCCTGATGATATTAT+TGG | + | chr8.3:66305633-66305652 | MS.gene068333:CDS | 25.0% |
! | ATAAGATGTCACAAAAATAG+TGG | - | chr8.3:66306006-66306025 | None:intergenic | 25.0% |
! | ATCATGAATCATTTATCTGT+TGG | + | chr8.3:66306493-66306512 | MS.gene068333:intron | 25.0% |
! | ATTCCAAAATTGAAAACTGT+TGG | - | chr8.3:66305660-66305679 | None:intergenic | 25.0% |
! | CAATATGATTCTTCAATTGA+TGG | + | chr8.3:66304353-66304372 | MS.gene068333:CDS | 25.0% |
! | CGAAAATTACTATTGTATTG+TGG | + | chr8.3:66307550-66307569 | MS.gene068333:intron | 25.0% |
! | CTTTATTCAAGCATATTCTA+AGG | + | chr8.3:66304829-66304848 | MS.gene068333:intron | 25.0% |
! | GTTCTATTTGCATTACTTAT+AGG | + | chr8.3:66306162-66306181 | MS.gene068333:CDS | 25.0% |
! | TAAAAATTTCACCTTTGGAT+TGG | + | chr8.3:66307398-66307417 | MS.gene068333:intron | 25.0% |
! | TAAAGACAAGCACTTATATT+GGG | + | chr8.3:66306100-66306119 | MS.gene068333:CDS | 25.0% |
! | TCAAAATCTGCACTAAAATA+TGG | - | chr8.3:66304015-66304034 | None:intergenic | 25.0% |
! | TCAATGTTCCATTCAAATTA+AGG | - | chr8.3:66304586-66304605 | None:intergenic | 25.0% |
! | TCATCTAAAAATTTCACCTT+TGG | + | chr8.3:66307393-66307412 | MS.gene068333:intron | 25.0% |
! | TCTGATGAAGTAAAGATTAT+AGG | + | chr8.3:66306532-66306551 | MS.gene068333:intron | 25.0% |
! | TGTAAACAAGTATAGTTAAG+TGG | - | chr8.3:66306867-66306886 | None:intergenic | 25.0% |
! | TTATCCATGTTGCTAAAAAT+TGG | - | chr8.3:66306904-66306923 | None:intergenic | 25.0% |
! | TTCCAAAATTGAAAACTGTT+GGG | - | chr8.3:66305659-66305678 | None:intergenic | 25.0% |
! | TTCCATATATAACAAAGGAT+TGG | + | chr8.3:66305182-66305201 | MS.gene068333:CDS | 25.0% |
!! | AACCAATCCTTTGTTATATA+TGG | - | chr8.3:66305187-66305206 | None:intergenic | 25.0% |
!! | ACAATAGTAATTTTCGAAAC+TGG | - | chr8.3:66307546-66307565 | None:intergenic | 25.0% |
!! | ATAAATTCTTCTACTGCTTT+TGG | + | chr8.3:66305733-66305752 | MS.gene068333:CDS | 25.0% |
!! | ATTTTTGTGACATCTTATCA+AGG | + | chr8.3:66306008-66306027 | MS.gene068333:intron | 25.0% |
!! | TAGTACTTTCATCTTTTACT+TGG | + | chr8.3:66306829-66306848 | MS.gene068333:intron | 25.0% |
!! | TATTTGTGATATTAGGTTGT+TGG | + | chr8.3:66305456-66305475 | MS.gene068333:intron | 25.0% |
!! | TCGCTATCAAAAAACATTTT+AGG | + | chr8.3:66306364-66306383 | MS.gene068333:intron | 25.0% |
!!! | ATAAGCTTTGAAAAAAGTCT+TGG | - | chr8.3:66306322-66306341 | None:intergenic | 25.0% |
AAAAGTTTCGTTGTTTGTGA+AGG | + | chr8.3:66306976-66306995 | MS.gene068333:CDS | 30.0% | |
AAAGACAAGCACTTATATTG+GGG | + | chr8.3:66306101-66306120 | MS.gene068333:CDS | 30.0% | |
AACAGGAAAAGAAATTTGTG+AGG | + | chr8.3:66303832-66303851 | MS.gene068333:CDS | 30.0% | |
ACAGGGATGTAAAAGAATAA+TGG | - | chr8.3:66304542-66304561 | None:intergenic | 30.0% | |
ACTTGTTTACATGTGATGAT+AGG | + | chr8.3:66306876-66306895 | MS.gene068333:intron | 30.0% | |
AGAGACTAAGCATAAATCTT+TGG | + | chr8.3:66304195-66304214 | MS.gene068333:intron | 30.0% | |
AGATAGGAATCATCAAAGAA+TGG | - | chr8.3:66305549-66305568 | None:intergenic | 30.0% | |
AGTACACTATATATGTGACT+AGG | - | chr8.3:66306471-66306490 | None:intergenic | 30.0% | |
ATATCATCAGGATCTTTGTA+AGG | - | chr8.3:66305630-66305649 | None:intergenic | 30.0% | |
ATTACTTATAGGAAACATGC+AGG | + | chr8.3:66306173-66306192 | MS.gene068333:CDS | 30.0% | |
CAACATGGATAAACAGTTAT+TGG | + | chr8.3:66306912-66306931 | MS.gene068333:CDS | 30.0% | |
CAATATAAGTGCTTGTCTTT+AGG | - | chr8.3:66306101-66306120 | None:intergenic | 30.0% | |
CTAAAGACAAGCACTTATAT+TGG | + | chr8.3:66306099-66306118 | MS.gene068333:CDS | 30.0% | |
CTCAGTTCCATATATAACAA+AGG | + | chr8.3:66305177-66305196 | MS.gene068333:CDS | 30.0% | |
GAACTTATACAAATGTTTGG+AGG | - | chr8.3:66305922-66305941 | None:intergenic | 30.0% | |
GTGAAATCCGAATTTGTATA+GGG | - | chr8.3:66303925-66303944 | None:intergenic | 30.0% | |
GTTAACTCTATAAGAACACA+AGG | - | chr8.3:66305817-66305836 | None:intergenic | 30.0% | |
GTTAATAAGACGTCGAAATT+GGG | - | chr8.3:66307250-66307269 | None:intergenic | 30.0% | |
TATATTAACTGAGACAGCAT+GGG | + | chr8.3:66305288-66305307 | MS.gene068333:CDS | 30.0% | |
TATCTCATTGCTATAGCAAA+AGG | - | chr8.3:66304737-66304756 | None:intergenic | 30.0% | |
TCATCCTAATATCTTTACCA+TGG | - | chr8.3:66307614-66307633 | None:intergenic | 30.0% | |
TGTTAATAAGACGTCGAAAT+TGG | - | chr8.3:66307251-66307270 | None:intergenic | 30.0% | |
TTAACTAATGCTCTTAAGCA+TGG | + | chr8.3:66305000-66305019 | MS.gene068333:intron | 30.0% | |
TTGAAGAGATGAGAATCAAA+AGG | + | chr8.3:66306607-66306626 | MS.gene068333:CDS | 30.0% | |
! | ACAAACAACGAAACTTTTCT+CGG | - | chr8.3:66306974-66306993 | None:intergenic | 30.0% |
! | ATATTCTAAGGAGTTCACTA+AGG | + | chr8.3:66304841-66304860 | MS.gene068333:intron | 30.0% |
! | CTTTGTTATAACATGTGTGA+TGG | + | chr8.3:66304502-66304521 | MS.gene068333:CDS | 30.0% |
! | GGAAAATGCCTTAATTTGAA+TGG | + | chr8.3:66304575-66304594 | MS.gene068333:CDS | 30.0% |
! | TTCGAAACTGGTTTATATTG+CGG | - | chr8.3:66307534-66307553 | None:intergenic | 30.0% |
!! | AAATTGGGAAGCATTATCTA+AGG | - | chr8.3:66307322-66307341 | None:intergenic | 30.0% |
!! | CTTTATTTGCAGTGTTTTGA+TGG | + | chr8.3:66305975-66305994 | MS.gene068333:intron | 30.0% |
!!! | AAATCTTTGGTTTTCCTAGT+TGG | + | chr8.3:66304208-66304227 | MS.gene068333:intron | 30.0% |
!!! | TTGTTTTTTGCAGTTCTGTT+GGG | + | chr8.3:66306070-66306089 | MS.gene068333:intron | 30.0% |
AAGAGATGAGAATCAAAAGG+AGG | + | chr8.3:66306610-66306629 | MS.gene068333:CDS | 35.0% | |
AATGAAGTAACAAGCACTTC+TGG | + | chr8.3:66305265-66305284 | MS.gene068333:CDS | 35.0% | |
AATGTGTGATAAACTGAAGC+CGG | + | chr8.3:66306939-66306958 | MS.gene068333:CDS | 35.0% | |
ACATGTGTCTGATATAGACT+AGG | - | chr8.3:66306269-66306288 | None:intergenic | 35.0% | |
ACTACGTGAATTAGTGCAAT+CGG | - | chr8.3:66303955-66303974 | None:intergenic | 35.0% | |
ACTTGAAGCAAAGAATTCGA+CGG | + | chr8.3:66306673-66306692 | MS.gene068333:CDS | 35.0% | |
AGAGATGAGAATCAAAAGGA+GGG | + | chr8.3:66306611-66306630 | MS.gene068333:CDS | 35.0% | |
ATAGCAAAAGGATCATCAAC+CGG | - | chr8.3:66304725-66304744 | None:intergenic | 35.0% | |
ATGTCTCTTCTCAGATCTTT+AGG | - | chr8.3:66306762-66306781 | None:intergenic | 35.0% | |
ATTCTTTGCTTCAAGTGATC+CGG | - | chr8.3:66306669-66306688 | None:intergenic | 35.0% | |
CGAAATAGGTAAGTTTGAAG+AGG | - | chr8.3:66307154-66307173 | None:intergenic | 35.0% | |
CGTGAAATCCGAATTTGTAT+AGG | - | chr8.3:66303926-66303945 | None:intergenic | 35.0% | |
CTCAAACATTGTCATCAATG+AGG | - | chr8.3:66307666-66307685 | None:intergenic | 35.0% | |
CTTAAGTAAGGTGACTTGAT+AGG | - | chr8.3:66306390-66306409 | None:intergenic | 35.0% | |
GACGGTATGAACAATACAAA+TGG | + | chr8.3:66306691-66306710 | MS.gene068333:CDS | 35.0% | |
GAGACCATGGTAAAGATATT+AGG | + | chr8.3:66307607-66307626 | MS.gene068333:intron | 35.0% | |
GTATATTAACTGAGACAGCA+TGG | + | chr8.3:66305287-66305306 | MS.gene068333:CDS | 35.0% | |
TACAAATGGCAAGAAAATCG+AGG | + | chr8.3:66306705-66306724 | MS.gene068333:CDS | 35.0% | |
TATAGGGCAACTGAAACAAT+AGG | - | chr8.3:66303909-66303928 | None:intergenic | 35.0% | |
TCAACTGTACTAGTCGAAAT+AGG | - | chr8.3:66307168-66307187 | None:intergenic | 35.0% | |
TCAGTTGCCCTATACAAATT+CGG | + | chr8.3:66303915-66303934 | MS.gene068333:intron | 35.0% | |
TGACTTCCAATCTTCAAATC+TGG | - | chr8.3:66304309-66304328 | None:intergenic | 35.0% | |
TGTCTCTTCTCAGATCTTTA+GGG | - | chr8.3:66306761-66306780 | None:intergenic | 35.0% | |
TTCTGTCCAGATTTGAAGAT+TGG | + | chr8.3:66304300-66304319 | MS.gene068333:intron | 35.0% | |
TTGTGAATTTGGATTCCTTG+CGG | - | chr8.3:66304142-66304161 | None:intergenic | 35.0% | |
! | AACTGGTTTCTTTAACTCGA+CGG | + | chr8.3:66307068-66307087 | MS.gene068333:CDS | 35.0% |
! | ATAAGTCAGACTGACTTACA+AGG | + | chr8.3:66306235-66306254 | MS.gene068333:intron | 35.0% |
! | ATTGATGACAATGTTTGAGC+AGG | + | chr8.3:66307667-66307686 | MS.gene068333:intron | 35.0% |
! | CGAAACTTTTCTCGGTATAA+AGG | - | chr8.3:66306966-66306985 | None:intergenic | 35.0% |
! | CGTAATGATGTGTTGATAGA+TGG | + | chr8.3:66305123-66305142 | MS.gene068333:intron | 35.0% |
! | CTTTGAAAAAAGTCTTGGCT+TGG | - | chr8.3:66306317-66306336 | None:intergenic | 35.0% |
! | GTACTGCTAACTTGTGAATT+TGG | - | chr8.3:66304153-66304172 | None:intergenic | 35.0% |
! | TAAGTCAGACTGACTTACAA+GGG | + | chr8.3:66306236-66306255 | MS.gene068333:intron | 35.0% |
!! | AATTCTTCTACTGCTTTTGG+TGG | + | chr8.3:66305736-66305755 | MS.gene068333:CDS | 35.0% |
!! | ATTAGGTTGTTGGAGCATTT+TGG | + | chr8.3:66305466-66305485 | MS.gene068333:intron | 35.0% |
!! | ATTCTTCTACTGCTTTTGGT+GGG | + | chr8.3:66305737-66305756 | MS.gene068333:CDS | 35.0% |
!! | GTTTTAATCAGTTATGCCTC+CGG | - | chr8.3:66307426-66307445 | None:intergenic | 35.0% |
!! | TCAAATTAAGGCATTTTCCC+TGG | - | chr8.3:66304574-66304593 | None:intergenic | 35.0% |
!! | TTGTTCCATTTCTGAAGTAG+TGG | - | chr8.3:66304479-66304498 | None:intergenic | 35.0% |
!!! | GTTGTTTTTTGCAGTTCTGT+TGG | + | chr8.3:66306069-66306088 | MS.gene068333:intron | 35.0% |
!!! | TTTTTTGCTGGAGTAACACT+TGG | - | chr8.3:66304401-66304420 | None:intergenic | 35.0% |
AAGGTCCACTACTTCAGAAA+TGG | + | chr8.3:66304471-66304490 | MS.gene068333:CDS | 40.0% | |
AATTCACGTAGTCAGCACAT+CGG | + | chr8.3:66303963-66303982 | MS.gene068333:intron | 40.0% | |
ACCAACTGATCTCTATCCAA+AGG | + | chr8.3:66304073-66304092 | MS.gene068333:intron | 40.0% | |
ACCTTTGGATAGAGATCAGT+TGG | - | chr8.3:66304077-66304096 | None:intergenic | 40.0% | |
AGCATGGTTAACAGTATCGT+AGG | + | chr8.3:66305016-66305035 | MS.gene068333:intron | 40.0% | |
ATATATGGAACTGAGCCTTG+TGG | - | chr8.3:66305172-66305191 | None:intergenic | 40.0% | |
ATCAATTCTTCCACTTCCTC+AGG | + | chr8.3:66304787-66304806 | MS.gene068333:CDS | 40.0% | |
ATCGTCTTTCAGTTTCGAAC+CGG | + | chr8.3:66304659-66304678 | MS.gene068333:CDS | 40.0% | |
ATGTGTGATGGCAGTATCTA+TGG | + | chr8.3:66304514-66304533 | MS.gene068333:CDS | 40.0% | |
CAGGTAATCCTTAGTAAGGA+AGG | + | chr8.3:66306192-66306211 | MS.gene068333:intron | 40.0% | |
CATGCAGGTAATCCTTAGTA+AGG | + | chr8.3:66306188-66306207 | MS.gene068333:intron | 40.0% | |
CATTGGAAAAACCAGCTTCT+AGG | + | chr8.3:66304429-66304448 | MS.gene068333:CDS | 40.0% | |
CTTCATTGCTGTCTTTGGAT+TGG | + | chr8.3:66306140-66306159 | MS.gene068333:CDS | 40.0% | |
GCAATGATTCCAATTCCACA+AGG | + | chr8.3:66305154-66305173 | MS.gene068333:CDS | 40.0% | |
GGTAAGTTTGAAGAGGTTGT+AGG | - | chr8.3:66307147-66307166 | None:intergenic | 40.0% | |
GTACTGTATTCTGATACCTG+AGG | - | chr8.3:66304806-66304825 | None:intergenic | 40.0% | |
GTATAGATTCGCATGAGTCT+TGG | - | chr8.3:66305238-66305257 | None:intergenic | 40.0% | |
GTTGGGCCAATAATATCATC+AGG | - | chr8.3:66305642-66305661 | None:intergenic | 40.0% | |
TAGAATCAGAGTTGCGTTGT+TGG | + | chr8.3:66305502-66305521 | MS.gene068333:CDS | 40.0% | |
TATGAGGAAATGTGAGACCA+TGG | + | chr8.3:66307594-66307613 | MS.gene068333:intron | 40.0% | |
TATTCTGATACCTGAGGAAG+TGG | - | chr8.3:66304800-66304819 | None:intergenic | 40.0% | |
TCCAAAGACAGCAATGAAGA+TGG | - | chr8.3:66306139-66306158 | None:intergenic | 40.0% | |
TCTGATATAGACTAGGTCGT+AGG | - | chr8.3:66306262-66306281 | None:intergenic | 40.0% | |
TGTAGTGTTCTTGATCCACA+AGG | + | chr8.3:66304452-66304471 | MS.gene068333:CDS | 40.0% | |
! | ACAACAAATGGTGGAAGAAC+TGG | + | chr8.3:66307051-66307070 | MS.gene068333:CDS | 40.0% |
! | AGTTCTTCCACCATTTGTTG+TGG | - | chr8.3:66307052-66307071 | None:intergenic | 40.0% |
! | CTTTTCTCGGTATAAAGGAC+CGG | - | chr8.3:66306961-66306980 | None:intergenic | 40.0% |
! | GGCCCAACAGTTTTCAATTT+TGG | + | chr8.3:66305654-66305673 | MS.gene068333:CDS | 40.0% |
!! | TTCTTCGCGCATTTTTGGAA+GGG | + | chr8.3:66304694-66304713 | MS.gene068333:CDS | 40.0% |
!! | TTCTTCTACTGCTTTTGGTG+GGG | + | chr8.3:66305738-66305757 | MS.gene068333:CDS | 40.0% |
!!! | GCAGGTTTTATTCCTTGCAA+TGG | + | chr8.3:66307685-66307704 | MS.gene068333:intron | 40.0% |
!!! | GGTGCCAATTTTTAGCAACA+TGG | + | chr8.3:66306897-66306916 | MS.gene068333:intron | 40.0% |
!!! | GGTTTTATTCCTTGCAATGG+AGG | + | chr8.3:66307688-66307707 | MS.gene068333:intron | 40.0% |
AAAGGAGGGATGCAGAACAA+TGG | + | chr8.3:66306625-66306644 | MS.gene068333:CDS | 45.0% | |
AAGACCTCCAACACACTTTC+AGG | + | chr8.3:66307274-66307293 | MS.gene068333:intron | 45.0% | |
AGAACACTACACCTAGAAGC+TGG | - | chr8.3:66304443-66304462 | None:intergenic | 45.0% | |
ATTCCTTGCAATGGAGGACA+TGG | + | chr8.3:66307694-66307713 | MS.gene068333:CDS | 45.0% | |
CTCAGAGTCCTTCCTTACTA+AGG | - | chr8.3:66306203-66306222 | None:intergenic | 45.0% | |
CTCTCATGCATGATGACTTG+AGG | + | chr8.3:66307214-66307233 | MS.gene068333:CDS | 45.0% | |
CTTAAGACCGCCACAACAAA+TGG | + | chr8.3:66307039-66307058 | MS.gene068333:CDS | 45.0% | |
CTTCCAAAAATGCGCGAAGA+AGG | - | chr8.3:66304695-66304714 | None:intergenic | 45.0% | |
CTTTAACTCGACGGAACTCA+AGG | + | chr8.3:66307077-66307096 | MS.gene068333:CDS | 45.0% | |
GAAATGCTCTTCATCATGCG+CGG | + | chr8.3:66307012-66307031 | MS.gene068333:CDS | 45.0% | |
GATGATTCCTATCTGAGCTG+CGG | + | chr8.3:66305555-66305574 | MS.gene068333:CDS | 45.0% | |
GCCATCTTCATTGCTGTCTT+TGG | + | chr8.3:66306135-66306154 | MS.gene068333:CDS | 45.0% | |
GTCGTTTGATCGAGATCGAA+CGG | + | chr8.3:66303988-66304007 | MS.gene068333:intron | 45.0% | |
GTTAACAATCGATGACCGCA+AGG | + | chr8.3:66304124-66304143 | MS.gene068333:intron | 45.0% | |
GTTCTTGATCTTCTCTGCGT+AGG | + | chr8.3:66305780-66305799 | MS.gene068333:intron | 45.0% | |
TAACACAGTCAGCAGCACAT+CGG | - | chr8.3:66304102-66304121 | None:intergenic | 45.0% | |
TCAAGTGATCCGGTAGCATA+CGG | - | chr8.3:66306659-66306678 | None:intergenic | 45.0% | |
TCGTCTTTCAGTTTCGAACC+GGG | + | chr8.3:66304660-66304679 | MS.gene068333:CDS | 45.0% | |
TGAAGAGGTTGTAGGATCCA+AGG | - | chr8.3:66307139-66307158 | None:intergenic | 45.0% | |
TGGAGAGGAGCTTCTAACAT+GGG | + | chr8.3:66307113-66307132 | MS.gene068333:CDS | 45.0% | |
TGTTTGTGAAGGTGATCCAG+TGG | + | chr8.3:66306987-66307006 | MS.gene068333:CDS | 45.0% | |
TTCCCTGGTCATCAATCACA+GGG | - | chr8.3:66304559-66304578 | None:intergenic | 45.0% | |
TTCCTTGCAATGGAGGACAT+GGG | + | chr8.3:66307695-66307714 | MS.gene068333:CDS | 45.0% | |
TTTCCCTGGTCATCAATCAC+AGG | - | chr8.3:66304560-66304579 | None:intergenic | 45.0% | |
! | ATCCCTGTGATTGATGACCA+GGG | + | chr8.3:66304554-66304573 | MS.gene068333:CDS | 45.0% |
! | CGAAGAAGGTGCAATAAACC+CGG | - | chr8.3:66304681-66304700 | None:intergenic | 45.0% |
! | CTCAAGGCTGGTGATTTTTG+TGG | + | chr8.3:66307093-66307112 | MS.gene068333:CDS | 45.0% |
! | CTCTTCTCAGATCTTTAGGG+AGG | - | chr8.3:66306758-66306777 | None:intergenic | 45.0% |
! | GGGTTTGCGCAATTTAAGGT+TGG | + | chr8.3:66305758-66305777 | MS.gene068333:intron | 45.0% |
! | TTTCACCTTTGGATTGGAGC+CGG | + | chr8.3:66307404-66307423 | MS.gene068333:intron | 45.0% |
!! | ATGAAGAGCATTTCGTCCAC+TGG | - | chr8.3:66307006-66307025 | None:intergenic | 45.0% |
!! | CTTCTTCGCGCATTTTTGGA+AGG | + | chr8.3:66304693-66304712 | MS.gene068333:CDS | 45.0% |
!! | TCTTCCACCATTTGTTGTGG+CGG | - | chr8.3:66307049-66307068 | None:intergenic | 45.0% |
!! | TCTTCGCGCATTTTTGGAAG+GGG | + | chr8.3:66304695-66304714 | MS.gene068333:CDS | 45.0% |
!! | TTCTGAAGTAGTGGACCTTG+TGG | - | chr8.3:66304470-66304489 | None:intergenic | 45.0% |
!! | AAAATGATAAAATATATAAT+TGG | - | chr8.3:66307510-66307529 | None:intergenic | 5.0% |
AAGACCGCCACAACAAATGG+TGG | + | chr8.3:66307042-66307061 | MS.gene068333:CDS | 50.0% | |
CTCCAACACACTTTCAGGCA+AGG | + | chr8.3:66307279-66307298 | MS.gene068333:intron | 50.0% | |
GGTGGGGTTTGCGCAATTTA+AGG | + | chr8.3:66305754-66305773 | MS.gene068333:CDS | 50.0% | |
GTGGAGAGGAGCTTCTAACA+TGG | + | chr8.3:66307112-66307131 | MS.gene068333:CDS | 50.0% | |
TCCTTGCAATGGAGGACATG+GGG | + | chr8.3:66307696-66307715 | MS.gene068333:CDS | 50.0% | |
TGATGCTCTAACGTCTCGTG+TGG | + | chr8.3:66305686-66305705 | MS.gene068333:CDS | 50.0% | |
TTAACTGAGACAGCATGGGC+TGG | + | chr8.3:66305292-66305311 | MS.gene068333:CDS | 50.0% | |
! | AGCCTTGCCTGAAAGTGTGT+TGG | - | chr8.3:66307284-66307303 | None:intergenic | 50.0% |
! | CATCCCTGTGATTGATGACC+AGG | + | chr8.3:66304553-66304572 | MS.gene068333:CDS | 50.0% |
! | CTTGCCTGAAAGTGTGTTGG+AGG | - | chr8.3:66307281-66307300 | None:intergenic | 50.0% |
! | GCACCTTCTTCGCGCATTTT+TGG | + | chr8.3:66304689-66304708 | MS.gene068333:CDS | 50.0% |
! | GGAACTGAGCCTTGTGGAAT+TGG | - | chr8.3:66305166-66305185 | None:intergenic | 50.0% |
! | GGCTGGTGATTTTTGTGGAG+AGG | + | chr8.3:66307098-66307117 | MS.gene068333:CDS | 50.0% |
!! | CATTTTTGGAAGGGGAGAGC+CGG | + | chr8.3:66304703-66304722 | MS.gene068333:CDS | 50.0% |
AACTCGACGGAACTCAAGGC+TGG | + | chr8.3:66307081-66307100 | MS.gene068333:CDS | 55.0% | |
AGCAGCACATCGGTGACCTT+TGG | - | chr8.3:66304092-66304111 | None:intergenic | 55.0% | |
AGTGATCCGGTAGCATACGG+TGG | - | chr8.3:66306656-66306675 | None:intergenic | 55.0% | |
GATGTGCCACCGTATGCTAC+CGG | + | chr8.3:66306647-66306666 | MS.gene068333:CDS | 55.0% | |
GGAGCTTCTAACATGGGCCT+TGG | + | chr8.3:66307119-66307138 | MS.gene068333:CDS | 55.0% | |
TCACGTAGTCAGCACATCGG+TGG | + | chr8.3:66303966-66303985 | MS.gene068333:intron | 55.0% | |
TCCCCATGTCCTCCATTGCA+AGG | - | chr8.3:66307700-66307719 | None:intergenic | 55.0% | |
TGCTCTAACGTCTCGTGTGG+TGG | + | chr8.3:66305689-66305708 | MS.gene068333:CDS | 55.0% | |
AATGGAGGACATGGGGAGCG+CGG | + | chr8.3:66307703-66307722 | MS.gene068333:CDS | 60.0% | |
GAGTCGTCCGCAGCTCAGAT+AGG | - | chr8.3:66305565-66305584 | None:intergenic | 60.0% | |
TGCCTCCGGCTCCAATCCAA+AGG | - | chr8.3:66307412-66307431 | None:intergenic | 60.0% | |
! | CACCTTTGGATTGGAGCCGG+AGG | + | chr8.3:66307407-66307426 | MS.gene068333:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 66303825 | 66307738 | 66303825 | ID=MS.gene068333 |
chr8.3 | mRNA | 66303825 | 66307738 | 66303825 | ID=MS.gene068333.t1;Parent=MS.gene068333 |
chr8.3 | exon | 66303825 | 66303853 | 66303825 | ID=MS.gene068333.t1.exon1;Parent=MS.gene068333.t1 |
chr8.3 | CDS | 66303825 | 66303853 | 66303825 | ID=cds.MS.gene068333.t1;Parent=MS.gene068333.t1 |
chr8.3 | exon | 66304310 | 66304808 | 66304310 | ID=MS.gene068333.t1.exon2;Parent=MS.gene068333.t1 |
chr8.3 | CDS | 66304310 | 66304808 | 66304310 | ID=cds.MS.gene068333.t1;Parent=MS.gene068333.t1 |
chr8.3 | exon | 66305142 | 66305354 | 66305142 | ID=MS.gene068333.t1.exon3;Parent=MS.gene068333.t1 |
chr8.3 | CDS | 66305142 | 66305354 | 66305142 | ID=cds.MS.gene068333.t1;Parent=MS.gene068333.t1 |
chr8.3 | exon | 66305471 | 66305775 | 66305471 | ID=MS.gene068333.t1.exon4;Parent=MS.gene068333.t1 |
chr8.3 | CDS | 66305471 | 66305775 | 66305471 | ID=cds.MS.gene068333.t1;Parent=MS.gene068333.t1 |
chr8.3 | exon | 66306083 | 66306194 | 66306083 | ID=MS.gene068333.t1.exon5;Parent=MS.gene068333.t1 |
chr8.3 | CDS | 66306083 | 66306194 | 66306083 | ID=cds.MS.gene068333.t1;Parent=MS.gene068333.t1 |
chr8.3 | exon | 66306579 | 66306815 | 66306579 | ID=MS.gene068333.t1.exon6;Parent=MS.gene068333.t1 |
chr8.3 | CDS | 66306579 | 66306815 | 66306579 | ID=cds.MS.gene068333.t1;Parent=MS.gene068333.t1 |
chr8.3 | exon | 66306898 | 66307258 | 66306898 | ID=MS.gene068333.t1.exon7;Parent=MS.gene068333.t1 |
chr8.3 | CDS | 66306898 | 66307258 | 66306898 | ID=cds.MS.gene068333.t1;Parent=MS.gene068333.t1 |
chr8.3 | exon | 66307689 | 66307738 | 66307689 | ID=MS.gene068333.t1.exon8;Parent=MS.gene068333.t1 |
chr8.3 | CDS | 66307689 | 66307738 | 66307689 | ID=cds.MS.gene068333.t1;Parent=MS.gene068333.t1 |
Gene Sequence |
Protein sequence |