Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068556.t1 | XP_013468292.1 | 96 | 379 | 13 | 2 | 1 | 379 | 1 | 377 | 2.20E-201 | 711.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068556.t1 | Q9C8G4 | 39.5 | 276 | 155 | 6 | 64 | 329 | 53 | 326 | 1.1e-44 | 182.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068556.t1 | A0A072VJW3 | 96.0 | 379 | 13 | 2 | 1 | 379 | 1 | 377 | 1.6e-201 | 711.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049356 | MS.gene068556 | 0.803625 | 3.19E-49 | -1.69E-46 |
MS.gene049369 | MS.gene068556 | 0.806667 | 7.36E-50 | -1.69E-46 |
MS.gene049396 | MS.gene068556 | 0.820785 | 5.71E-53 | -1.69E-46 |
MS.gene054486 | MS.gene068556 | 0.838839 | 2.27E-57 | -1.69E-46 |
MS.gene056422 | MS.gene068556 | 0.806151 | 9.45E-50 | -1.69E-46 |
MS.gene057668 | MS.gene068556 | 0.83283 | 7.56E-56 | -1.69E-46 |
MS.gene058075 | MS.gene068556 | 0.820711 | 5.94E-53 | -1.69E-46 |
MS.gene059674 | MS.gene068556 | 0.811991 | 5.31E-51 | -1.69E-46 |
MS.gene059711 | MS.gene068556 | 0.835277 | 1.84E-56 | -1.69E-46 |
MS.gene059807 | MS.gene068556 | 0.800275 | 1.56E-48 | -1.69E-46 |
MS.gene060837 | MS.gene068556 | 0.80552 | 1.28E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068556.t1 | MTR_1g067450 | 97.098 | 379 | 9 | 2 | 1 | 379 | 1 | 377 | 0.0 | 766 |
MS.gene068556.t1 | MTR_1g115550 | 73.765 | 324 | 84 | 1 | 55 | 377 | 4 | 327 | 0.0 | 504 |
MS.gene068556.t1 | MTR_1g111590 | 40.138 | 289 | 145 | 8 | 64 | 326 | 84 | 370 | 1.84e-49 | 172 |
MS.gene068556.t1 | MTR_6g011420 | 37.979 | 287 | 152 | 5 | 66 | 327 | 123 | 408 | 9.04e-49 | 171 |
MS.gene068556.t1 | MTR_4g132460 | 40.856 | 257 | 127 | 6 | 58 | 290 | 50 | 305 | 4.52e-48 | 167 |
MS.gene068556.t1 | MTR_2g023990 | 36.145 | 332 | 181 | 10 | 19 | 326 | 39 | 363 | 5.61e-47 | 165 |
MS.gene068556.t1 | MTR_6g021950 | 37.193 | 285 | 155 | 4 | 66 | 326 | 75 | 359 | 3.65e-45 | 160 |
MS.gene068556.t1 | MTR_1g062930 | 37.126 | 334 | 176 | 10 | 66 | 373 | 90 | 415 | 7.92e-43 | 155 |
MS.gene068556.t1 | MTR_7g009390 | 38.014 | 292 | 152 | 6 | 66 | 329 | 121 | 411 | 8.39e-43 | 155 |
MS.gene068556.t1 | MTR_1g047370 | 38.062 | 289 | 151 | 8 | 64 | 326 | 119 | 405 | 2.81e-42 | 154 |
MS.gene068556.t1 | MTR_4g104320 | 36.054 | 294 | 162 | 6 | 58 | 326 | 69 | 361 | 3.40e-42 | 152 |
MS.gene068556.t1 | MTR_7g059290 | 37.500 | 288 | 154 | 6 | 64 | 326 | 113 | 399 | 1.21e-40 | 149 |
MS.gene068556.t1 | MTR_3g075320 | 35.714 | 294 | 163 | 6 | 58 | 326 | 69 | 361 | 4.98e-40 | 146 |
MS.gene068556.t1 | MTR_3g086320 | 36.177 | 293 | 162 | 6 | 58 | 326 | 69 | 360 | 6.90e-40 | 146 |
MS.gene068556.t1 | MTR_5g038510 | 35.254 | 295 | 160 | 9 | 64 | 329 | 117 | 409 | 2.84e-39 | 145 |
MS.gene068556.t1 | MTR_7g102940 | 35.417 | 336 | 179 | 8 | 66 | 373 | 85 | 410 | 6.68e-39 | 145 |
MS.gene068556.t1 | MTR_3g086310 | 34.130 | 293 | 168 | 6 | 58 | 326 | 67 | 358 | 6.58e-38 | 140 |
MS.gene068556.t1 | MTR_8g078390 | 36.803 | 269 | 136 | 9 | 86 | 326 | 83 | 345 | 1.71e-36 | 137 |
MS.gene068556.t1 | MTR_4g107870 | 32.787 | 305 | 176 | 7 | 58 | 334 | 99 | 402 | 2.69e-36 | 137 |
MS.gene068556.t1 | MTR_4g064420 | 36.680 | 259 | 134 | 8 | 92 | 326 | 76 | 328 | 5.11e-36 | 135 |
MS.gene068556.t1 | MTR_3g030900 | 36.680 | 259 | 134 | 9 | 92 | 326 | 74 | 326 | 5.70e-35 | 132 |
MS.gene068556.t1 | MTR_8g078310 | 36.680 | 259 | 134 | 7 | 92 | 326 | 93 | 345 | 6.93e-35 | 132 |
MS.gene068556.t1 | MTR_8g078280 | 35.271 | 258 | 139 | 8 | 92 | 326 | 93 | 345 | 3.10e-34 | 130 |
MS.gene068556.t1 | MTR_5g038490 | 34.256 | 289 | 162 | 7 | 64 | 326 | 117 | 403 | 6.00e-34 | 131 |
MS.gene068556.t1 | MTR_8g078350 | 35.521 | 259 | 137 | 7 | 92 | 326 | 93 | 345 | 7.67e-34 | 129 |
MS.gene068556.t1 | MTR_8g468980 | 33.555 | 301 | 164 | 10 | 64 | 329 | 116 | 415 | 2.35e-33 | 129 |
MS.gene068556.t1 | MTR_1g069950 | 35.065 | 231 | 121 | 7 | 119 | 326 | 3 | 227 | 2.20e-29 | 115 |
MS.gene068556.t1 | MTR_3g075320 | 38.679 | 212 | 104 | 6 | 66 | 252 | 77 | 287 | 4.66e-29 | 114 |
MS.gene068556.t1 | MTR_5g019160 | 33.700 | 273 | 147 | 9 | 86 | 330 | 82 | 348 | 7.53e-29 | 116 |
MS.gene068556.t1 | MTR_5g035840 | 34.211 | 266 | 147 | 8 | 86 | 326 | 82 | 344 | 7.61e-29 | 116 |
MS.gene068556.t1 | MTR_5g019170 | 34.400 | 250 | 135 | 8 | 86 | 307 | 82 | 330 | 1.87e-28 | 115 |
MS.gene068556.t1 | MTR_5g019060 | 35.294 | 255 | 135 | 9 | 96 | 326 | 96 | 344 | 2.15e-28 | 114 |
MS.gene068556.t1 | MTR_5g019090 | 34.000 | 250 | 136 | 8 | 86 | 307 | 82 | 330 | 2.13e-27 | 112 |
MS.gene068556.t1 | MTR_6g077900 | 31.873 | 251 | 156 | 5 | 86 | 326 | 12 | 257 | 1.95e-22 | 96.3 |
MS.gene068556.t1 | MTR_3g070740 | 37.888 | 161 | 82 | 5 | 169 | 326 | 135 | 280 | 4.87e-21 | 93.2 |
MS.gene068556.t1 | MTR_2g023980 | 29.870 | 231 | 106 | 6 | 118 | 326 | 2 | 198 | 2.17e-18 | 85.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068556.t1 | AT3G55140 | 73.860 | 329 | 86 | 0 | 51 | 379 | 1 | 329 | 0.0 | 522 |
MS.gene068556.t1 | AT3G55140 | 74.394 | 289 | 74 | 0 | 91 | 379 | 17 | 305 | 9.62e-166 | 466 |
MS.gene068556.t1 | AT3G09540 | 67.278 | 327 | 106 | 1 | 51 | 377 | 48 | 373 | 8.09e-164 | 464 |
MS.gene068556.t1 | AT3G09540 | 66.361 | 327 | 105 | 2 | 51 | 377 | 48 | 369 | 3.87e-160 | 454 |
MS.gene068556.t1 | AT3G09540 | 73.160 | 231 | 62 | 0 | 51 | 281 | 48 | 278 | 4.02e-127 | 367 |
MS.gene068556.t1 | AT5G55720 | 39.929 | 283 | 149 | 6 | 64 | 326 | 66 | 347 | 2.87e-52 | 179 |
MS.gene068556.t1 | AT1G30350 | 39.493 | 276 | 155 | 6 | 64 | 329 | 53 | 326 | 4.12e-52 | 177 |
MS.gene068556.t1 | AT1G11920 | 41.036 | 251 | 123 | 6 | 64 | 290 | 54 | 303 | 7.39e-47 | 164 |
MS.gene068556.t1 | AT3G54920 | 39.785 | 279 | 148 | 7 | 66 | 326 | 99 | 375 | 5.20e-46 | 164 |
MS.gene068556.t1 | AT4G22090 | 36.426 | 291 | 158 | 7 | 60 | 326 | 60 | 347 | 1.11e-44 | 159 |
MS.gene068556.t1 | AT4G13710 | 37.500 | 288 | 154 | 6 | 64 | 326 | 120 | 406 | 1.46e-43 | 157 |
MS.gene068556.t1 | AT2G02720 | 36.333 | 300 | 162 | 7 | 58 | 329 | 112 | 410 | 2.03e-43 | 157 |
MS.gene068556.t1 | AT4G13710 | 37.500 | 288 | 154 | 6 | 64 | 326 | 139 | 425 | 2.24e-43 | 157 |
MS.gene068556.t1 | AT4G22080 | 38.976 | 254 | 130 | 5 | 64 | 293 | 64 | 316 | 3.00e-43 | 155 |
MS.gene068556.t1 | AT3G27400 | 34.667 | 300 | 158 | 5 | 58 | 326 | 75 | 367 | 3.33e-43 | 155 |
MS.gene068556.t1 | AT3G27400 | 34.667 | 300 | 158 | 5 | 58 | 326 | 79 | 371 | 4.08e-43 | 155 |
MS.gene068556.t1 | AT5G63180 | 36.111 | 288 | 158 | 6 | 64 | 326 | 99 | 385 | 2.59e-42 | 153 |
MS.gene068556.t1 | AT1G67750 | 36.364 | 286 | 156 | 6 | 66 | 326 | 79 | 363 | 5.62e-42 | 152 |
MS.gene068556.t1 | AT3G24230 | 36.364 | 286 | 156 | 6 | 66 | 326 | 123 | 407 | 5.47e-41 | 150 |
MS.gene068556.t1 | AT1G14420 | 35.034 | 294 | 162 | 8 | 64 | 329 | 122 | 414 | 1.10e-40 | 149 |
MS.gene068556.t1 | AT1G04680 | 37.153 | 288 | 155 | 6 | 64 | 326 | 98 | 384 | 1.24e-40 | 149 |
MS.gene068556.t1 | AT4G24780 | 35.664 | 286 | 158 | 6 | 66 | 326 | 79 | 363 | 6.19e-40 | 146 |
MS.gene068556.t1 | AT4G24780 | 35.664 | 286 | 158 | 6 | 66 | 326 | 79 | 363 | 6.19e-40 | 146 |
MS.gene068556.t1 | AT3G01270 | 35.593 | 295 | 160 | 8 | 64 | 329 | 142 | 435 | 7.60e-40 | 147 |
MS.gene068556.t1 | AT5G04310 | 37.450 | 251 | 136 | 5 | 96 | 326 | 149 | 398 | 9.06e-40 | 148 |
MS.gene068556.t1 | AT5G04310 | 37.450 | 251 | 136 | 5 | 96 | 326 | 149 | 398 | 9.06e-40 | 148 |
MS.gene068556.t1 | AT5G04310 | 37.063 | 286 | 154 | 6 | 66 | 326 | 114 | 398 | 9.22e-40 | 147 |
MS.gene068556.t1 | AT3G07010 | 35.764 | 288 | 159 | 6 | 64 | 326 | 52 | 338 | 1.07e-39 | 145 |
MS.gene068556.t1 | AT3G07010 | 35.764 | 288 | 159 | 6 | 64 | 326 | 85 | 371 | 1.33e-39 | 145 |
MS.gene068556.t1 | AT5G48900 | 36.491 | 285 | 157 | 4 | 66 | 326 | 88 | 372 | 5.21e-39 | 144 |
MS.gene068556.t1 | AT3G24670 | 34.694 | 294 | 166 | 5 | 58 | 326 | 103 | 395 | 1.46e-38 | 143 |
MS.gene068556.t1 | AT4G13210 | 36.458 | 288 | 157 | 5 | 64 | 326 | 70 | 356 | 1.88e-38 | 142 |
MS.gene068556.t1 | AT5G15110 | 34.694 | 294 | 164 | 8 | 64 | 329 | 139 | 432 | 2.40e-38 | 143 |
MS.gene068556.t1 | AT4G13210 | 36.458 | 288 | 157 | 5 | 64 | 326 | 107 | 393 | 2.63e-38 | 142 |
MS.gene068556.t1 | AT3G53190 | 37.370 | 289 | 153 | 9 | 64 | 326 | 91 | 377 | 1.04e-37 | 142 |
MS.gene068556.t1 | AT5G09280 | 36.100 | 241 | 127 | 7 | 86 | 299 | 12 | 252 | 8.38e-33 | 125 |
Find 82 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACAATAATTACTCCAGAAAT+TGG | 0.179620 | 1.2:+50903898 | MS.gene068556:CDS |
AGCATATATGCCCCAATTTC+TGG | 0.202085 | 1.2:-50903910 | None:intergenic |
TCCCAGTCAGCTTAATCTTT+TGG | 0.239290 | 1.2:-50903126 | None:intergenic |
AATTGGAAGTACCTTGGTTT+TGG | 0.280148 | 1.2:-50901962 | None:intergenic |
GCTGCTCAAGCTGAAGGTTT+TGG | 0.297527 | 1.2:+50902044 | MS.gene068556:CDS |
ACTTAAAAGCAACCTTCTTC+TGG | 0.299483 | 1.2:-50904094 | None:intergenic |
TATCATGTTACATCCCTCTT+AGG | 0.300173 | 1.2:+50902101 | MS.gene068556:CDS |
TTCATAAACGGTGCTCAATC+AGG | 0.300827 | 1.2:+50905027 | MS.gene068556:CDS |
AACCTAACTCAAAACATATA+TGG | 0.307301 | 1.2:+50903242 | MS.gene068556:CDS |
GCATCTATCATCAACATGTT+TGG | 0.315446 | 1.2:-50903793 | None:intergenic |
TATGATGATGTTGAGAGTTT+TGG | 0.322478 | 1.2:-50901929 | None:intergenic |
TGCGCTATCGGTGGACTTGA+TGG | 0.326919 | 1.2:+50902071 | MS.gene068556:CDS |
GGTGGAGGAACCGTGTTGTT+AGG | 0.344716 | 1.2:-50901894 | None:intergenic |
CAATAATTACTCCAGAAATT+GGG | 0.349008 | 1.2:+50903899 | MS.gene068556:CDS |
GCTCAAACGGCTTGATCCGC+TGG | 0.353881 | 1.2:-50905183 | None:intergenic |
ATTTGTAATTTAGAGATAGA+AGG | 0.357760 | 1.2:+50903184 | MS.gene068556:CDS |
TCATCATACAAGACCATTGA+TGG | 0.390763 | 1.2:+50903097 | MS.gene068556:CDS |
CATCTATCATCAACATGTTT+GGG | 0.400978 | 1.2:-50903792 | None:intergenic |
GGTCATGTTGATGTTGGAAT+TGG | 0.417636 | 1.2:-50901979 | None:intergenic |
TTCTGGAGTAATTATTGTAC+AGG | 0.426406 | 1.2:-50903893 | None:intergenic |
CCATGTCTGATAGTGTTCAC+TGG | 0.434358 | 1.2:-50905088 | None:intergenic |
AGCTGACTGGGAAGGGGCTT+AGG | 0.445830 | 1.2:+50903137 | MS.gene068556:CDS |
GACAAGGATGCTGAAGCAAC+TGG | 0.451398 | 1.2:+50904979 | MS.gene068556:CDS |
TGCTTTAGATCATCTGTTGG+AGG | 0.455189 | 1.2:-50905120 | None:intergenic |
CAAGTTCTTCATCACTGTAC+TGG | 0.462941 | 1.2:+50905141 | MS.gene068556:CDS |
GGCTGATGACAGAGAATGTT+GGG | 0.465147 | 1.2:+50905049 | MS.gene068556:CDS |
ACTTGCTTTAGATCATCTGT+TGG | 0.479271 | 1.2:-50905123 | None:intergenic |
TAGCTTCTATTCTGCTCAAA+CGG | 0.479280 | 1.2:-50905196 | None:intergenic |
AAGATTAAGCTGACTGGGAA+GGG | 0.481642 | 1.2:+50903130 | MS.gene068556:CDS |
GCACTGATATTACTATTTCA+AGG | 0.483855 | 1.2:+50903323 | MS.gene068556:CDS |
GGCCAAAAGATTAAGCTGAC+TGG | 0.485115 | 1.2:+50903124 | MS.gene068556:CDS |
GTGGAGGAACCGTGTTGTTA+GGG | 0.486676 | 1.2:-50901893 | None:intergenic |
CATGACAAAACAATACTCAT+TGG | 0.486741 | 1.2:+50903762 | MS.gene068556:CDS |
CTCTTTGCAGGCAGCAGACA+AGG | 0.492004 | 1.2:+50904963 | MS.gene068556:intron |
TCCCTCGCTGCTCAAGCTGA+AGG | 0.492949 | 1.2:+50902038 | MS.gene068556:CDS |
GAAGGCGACTTATTCATAAA+CGG | 0.505801 | 1.2:+50905015 | MS.gene068556:CDS |
TATGAATGCAGATGATGGAC+CGG | 0.508400 | 1.2:+50902982 | MS.gene068556:intron |
AAAGAGTAAACAAACCTAAG+AGG | 0.509222 | 1.2:-50902115 | None:intergenic |
CAGCTTGAGCAGCGAGGGAA+CGG | 0.510186 | 1.2:-50902034 | None:intergenic |
CATCCATCGCGCAATGATCC+CGG | 0.510688 | 1.2:-50903001 | None:intergenic |
ATCTGAATAGCATCAACATC+AGG | 0.513051 | 1.2:-50903217 | None:intergenic |
TGGTATTTATAAGGTGGTGG+AGG | 0.520644 | 1.2:-50901909 | None:intergenic |
GAGATGTCGGCGTTAACGTA+AGG | 0.529596 | 1.2:-50902008 | None:intergenic |
CTATGAAGCGGGCCAGAAGA+AGG | 0.533381 | 1.2:+50904082 | MS.gene068556:CDS |
ACCTTCAGCTTGAGCAGCGA+GGG | 0.534366 | 1.2:-50902039 | None:intergenic |
CATGTCTGATAGTGTTCACT+GGG | 0.542482 | 1.2:-50905087 | None:intergenic |
CAACATAATATCTATGAAGC+GGG | 0.543319 | 1.2:+50904071 | MS.gene068556:CDS |
AATAATTACTCCAGAAATTG+GGG | 0.544303 | 1.2:+50903900 | MS.gene068556:CDS |
CAAAGTGGTCATGTTGATGT+TGG | 0.556472 | 1.2:-50901985 | None:intergenic |
ATGAATGCAGATGATGGACC+GGG | 0.556549 | 1.2:+50902983 | MS.gene068556:intron |
AGATTAAGCTGACTGGGAAG+GGG | 0.563249 | 1.2:+50903131 | MS.gene068556:CDS |
TTTGGCCGTTGCGCTATCGG+TGG | 0.566733 | 1.2:+50902062 | MS.gene068556:CDS |
TTGTGCAAGTGTGGAATCCC+AGG | 0.568592 | 1.2:+50903935 | MS.gene068556:CDS |
GCCAAAAGATTAAGCTGACT+GGG | 0.568791 | 1.2:+50903125 | MS.gene068556:CDS |
AAAGATTAAGCTGACTGGGA+AGG | 0.569293 | 1.2:+50903129 | MS.gene068556:CDS |
TTAGAGATAGAAGGAGGCAG+AGG | 0.569344 | 1.2:+50903193 | MS.gene068556:CDS |
AAGAGTAAACAAACCTAAGA+GGG | 0.570148 | 1.2:-50902114 | None:intergenic |
TACAAGACCATTGATGGAAG+GGG | 0.572688 | 1.2:+50903103 | MS.gene068556:CDS |
TCATAAACGGTGCTCAATCA+GGG | 0.583212 | 1.2:+50905028 | MS.gene068556:CDS |
ATACAAGACCATTGATGGAA+GGG | 0.584992 | 1.2:+50903102 | MS.gene068556:CDS |
AGTCGCCTTCAGAAATTATG+TGG | 0.588438 | 1.2:-50905002 | None:intergenic |
GAGGGAACGGAGAGAGATGT+CGG | 0.589100 | 1.2:-50902021 | None:intergenic |
GGCGTTAACGTAAGGCAAAG+TGG | 0.598180 | 1.2:-50902000 | None:intergenic |
TTCTTCATCACTGTACTGGA+TGG | 0.600650 | 1.2:+50905145 | MS.gene068556:CDS |
CCAGTGAACACTATCAGACA+TGG | 0.604784 | 1.2:+50905088 | MS.gene068556:CDS |
TGTTGGAATTGGAAGTACCT+TGG | 0.607850 | 1.2:-50901968 | None:intergenic |
ACAACATAATATCTATGAAG+CGG | 0.610248 | 1.2:+50904070 | MS.gene068556:CDS |
TGTAATTTAGAGATAGAAGG+AGG | 0.615428 | 1.2:+50903187 | MS.gene068556:CDS |
CATACAAGACCATTGATGGA+AGG | 0.616815 | 1.2:+50903101 | MS.gene068556:CDS |
ATATGCTGTTTGTGCAAGTG+TGG | 0.616933 | 1.2:+50903926 | MS.gene068556:CDS |
GGGCTGATGACAGAGAATGT+TGG | 0.618156 | 1.2:+50905048 | MS.gene068556:CDS |
ACTGGCCACATAATTTCTGA+AGG | 0.637592 | 1.2:+50904997 | MS.gene068556:CDS |
CAAGTCCACCGATAGCGCAA+CGG | 0.641464 | 1.2:-50902067 | None:intergenic |
GCAATCTGTTGCGAGGCCAG+CGG | 0.644261 | 1.2:+50905167 | MS.gene068556:CDS |
AACCTTCAGCTTGAGCAGCG+AGG | 0.660370 | 1.2:-50902040 | None:intergenic |
GGGCTCATTGATATCACTCG+AGG | 0.673672 | 1.2:+50903298 | MS.gene068556:CDS |
TGTTGATGATAGATGCATGA+AGG | 0.679025 | 1.2:+50903800 | MS.gene068556:CDS |
GGACCGGGATCATTGCGCGA+TGG | 0.683709 | 1.2:+50902998 | MS.gene068556:CDS |
AATCCACCAAACCAAAACCA+AGG | 0.686669 | 1.2:+50901951 | MS.gene068556:CDS |
CTGGATGGCAATCTGTTGCG+AGG | 0.705043 | 1.2:+50905160 | MS.gene068556:CDS |
ACACTATCAGACATGGACAG+TGG | 0.708947 | 1.2:+50905095 | MS.gene068556:CDS |
AAAATGGGTAACGCACACGG+TGG | 0.716888 | 1.2:+50901843 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTCTATTTTATAAATTTCA+GGG | + | chr1.2:50902858-50902877 | MS.gene068556:intron | 10.0% |
!! | AAAACTGCTATAAAAAAAAT+AGG | - | chr1.2:50904520-50904539 | None:intergenic | 15.0% |
!! | AAACTGCTATAAAAAAAATA+GGG | - | chr1.2:50904519-50904538 | None:intergenic | 15.0% |
!! | TAATATTGTTCATAACATAA+AGG | - | chr1.2:50904196-50904215 | None:intergenic | 15.0% |
!! | TTATCTTTCATTAATGAAAT+TGG | + | chr1.2:50902615-50902634 | MS.gene068556:intron | 15.0% |
!! | TTTAAGTATCAATCAATTTA+GGG | + | chr1.2:50902283-50902302 | MS.gene068556:intron | 15.0% |
!!! | ATAATTTATACCTTTTCATT+TGG | + | chr1.2:50904912-50904931 | MS.gene068556:intron | 15.0% |
!!! | GTTTCTATTTTATAAATTTC+AGG | + | chr1.2:50902857-50902876 | MS.gene068556:intron | 15.0% |
!!! | TTGATTTTATTAAACCAATT+CGG | + | chr1.2:50902934-50902953 | MS.gene068556:intron | 15.0% |
!!! | TTTTAAGTATCAATCAATTT+AGG | + | chr1.2:50902282-50902301 | MS.gene068556:intron | 15.0% |
!! | AAAAAATTGGTCCAAATTAT+AGG | - | chr1.2:50902743-50902762 | None:intergenic | 20.0% |
!! | AAAAATCATAATGTTTCACT+TGG | + | chr1.2:50902704-50902723 | MS.gene068556:intron | 20.0% |
!! | AGAGAACAATAAATAGTAAA+GGG | + | chr1.2:50902666-50902685 | MS.gene068556:intron | 20.0% |
!! | ATAAAAAATGCAATAACGAA+TGG | - | chr1.2:50902141-50902160 | None:intergenic | 20.0% |
!! | ATTTGTAATTTAGAGATAGA+AGG | + | chr1.2:50903184-50903203 | MS.gene068556:CDS | 20.0% |
!! | CAAAACCAATATAAAATCTA+CGG | - | chr1.2:50902470-50902489 | None:intergenic | 20.0% |
!! | GAAAAACTTATAATTTGGAA+AGG | - | chr1.2:50902521-50902540 | None:intergenic | 20.0% |
!! | GATAAACAAGAAGATTAAAT+TGG | + | chr1.2:50904934-50904953 | MS.gene068556:intron | 20.0% |
!! | GCAAAACAAAAACAAAAAAT+TGG | - | chr1.2:50902756-50902775 | None:intergenic | 20.0% |
!! | TGACAATTTCATATAAACTA+AGG | + | chr1.2:50902541-50902560 | MS.gene068556:intron | 20.0% |
!! | TGTCAGAAAAACTTATAATT+TGG | - | chr1.2:50902526-50902545 | None:intergenic | 20.0% |
!! | TTACAAAAGAACTTGAAAAA+TGG | + | chr1.2:50904213-50904232 | MS.gene068556:intron | 20.0% |
!! | TTGTTTATATCAGATAACTT+GGG | + | chr1.2:50904314-50904333 | MS.gene068556:intron | 20.0% |
!! | TTTCCATTTCAAATTATCAT+TGG | + | chr1.2:50903601-50903620 | MS.gene068556:intron | 20.0% |
!! | TTTGTTTATATCAGATAACT+TGG | + | chr1.2:50904313-50904332 | MS.gene068556:intron | 20.0% |
!!! | ATCAATGATTTTAGAGTAAA+TGG | + | chr1.2:50902241-50902260 | MS.gene068556:intron | 20.0% |
!!! | ATGATATGATATGATGATTT+TGG | - | chr1.2:50904026-50904045 | None:intergenic | 20.0% |
!!! | ATTTTACTTGTTAATCTTCT+TGG | + | chr1.2:50904773-50904792 | MS.gene068556:intron | 20.0% |
!!! | CATTGAATGAAATTGTTATT+AGG | + | chr1.2:50903970-50903989 | MS.gene068556:intron | 20.0% |
!!! | TCAATTTTCCAAATTTAGTA+CGG | + | chr1.2:50902389-50902408 | MS.gene068556:intron | 20.0% |
!!! | TTTTACTTGTTAATCTTCTT+GGG | + | chr1.2:50904774-50904793 | MS.gene068556:intron | 20.0% |
!!! | TTTTTATAGCAGTTTTATTC+TGG | + | chr1.2:50904524-50904543 | MS.gene068556:intron | 20.0% |
! | AAAGAACTTGAAAAATGGTT+AGG | + | chr1.2:50904218-50904237 | MS.gene068556:intron | 25.0% |
! | AACCTAACTCAAAACATATA+TGG | + | chr1.2:50903242-50903261 | MS.gene068556:CDS | 25.0% |
! | AATAAGTAAATCAACATTCC+CGG | - | chr1.2:50902916-50902935 | None:intergenic | 25.0% |
! | AATAATTACTCCAGAAATTG+GGG | + | chr1.2:50903900-50903919 | MS.gene068556:CDS | 25.0% |
! | ACAACATAATATCTATGAAG+CGG | + | chr1.2:50904070-50904089 | MS.gene068556:CDS | 25.0% |
! | ACAATAATTACTCCAGAAAT+TGG | + | chr1.2:50903898-50903917 | MS.gene068556:CDS | 25.0% |
! | ACCATTTGGTAAAGATTATA+TGG | - | chr1.2:50903474-50903493 | None:intergenic | 25.0% |
! | AGACCAATGATAATTTGAAA+TGG | - | chr1.2:50903607-50903626 | None:intergenic | 25.0% |
! | ATAATCTTTACCAAATGGTT+CGG | + | chr1.2:50903475-50903494 | MS.gene068556:intron | 25.0% |
! | CAATAATTACTCCAGAAATT+GGG | + | chr1.2:50903899-50903918 | MS.gene068556:CDS | 25.0% |
! | CTAAAAGGTAAAACATAACT+TGG | - | chr1.2:50904160-50904179 | None:intergenic | 25.0% |
! | GAGAGAACAATAAATAGTAA+AGG | + | chr1.2:50902665-50902684 | MS.gene068556:intron | 25.0% |
! | GCATGACTTAAGAAAAATAT+CGG | - | chr1.2:50904365-50904384 | None:intergenic | 25.0% |
! | TAAAATTGCCGTACTAAATT+TGG | - | chr1.2:50902400-50902419 | None:intergenic | 25.0% |
! | TATTATGTTGTGAGAATATC+TGG | - | chr1.2:50904061-50904080 | None:intergenic | 25.0% |
! | TCCATATAATCTTTACCAAA+TGG | + | chr1.2:50903470-50903489 | MS.gene068556:intron | 25.0% |
! | TCGTAAAGTAACCTATAATT+TGG | + | chr1.2:50902729-50902748 | MS.gene068556:intron | 25.0% |
! | TTCCAAATACTAACATTCAT+AGG | + | chr1.2:50904573-50904592 | MS.gene068556:intron | 25.0% |
!! | CAAGTTATGTTTTACCTTTT+AGG | + | chr1.2:50904158-50904177 | MS.gene068556:intron | 25.0% |
!! | TCAATCCGTAGATTTTATAT+TGG | + | chr1.2:50902462-50902481 | MS.gene068556:intron | 25.0% |
!! | TCTTGTTTATCCAAATGAAA+AGG | - | chr1.2:50904925-50904944 | None:intergenic | 25.0% |
!! | TTTACTTGTTAATCTTCTTG+GGG | + | chr1.2:50904775-50904794 | MS.gene068556:intron | 25.0% |
!!! | ACTTTAAGTGATTTTGAAGA+TGG | + | chr1.2:50903277-50903296 | MS.gene068556:CDS | 25.0% |
!!! | ATCATTACAATTTTGACAAC+CGG | + | chr1.2:50902894-50902913 | MS.gene068556:intron | 25.0% |
!!! | ATCCATATATGTTTTGAGTT+AGG | - | chr1.2:50903247-50903266 | None:intergenic | 25.0% |
!!! | CTTTAAGTGATTTTGAAGAT+GGG | + | chr1.2:50903278-50903297 | MS.gene068556:CDS | 25.0% |
!!! | TGAGAGTTTTGGTATTTATA+AGG | - | chr1.2:50901921-50901940 | None:intergenic | 25.0% |
!!! | TTTGTTTTTGTTTTGCAAAG+TGG | + | chr1.2:50902760-50902779 | MS.gene068556:intron | 25.0% |
!!! | TTTTACCTTTTAGGTTGTAT+TGG | + | chr1.2:50904167-50904186 | MS.gene068556:intron | 25.0% |
AAAATGTGTTCAGAACAAAC+TGG | - | chr1.2:50904612-50904631 | None:intergenic | 30.0% | |
AAACTTAAAATGCAGAGTCA+AGG | - | chr1.2:50904459-50904478 | None:intergenic | 30.0% | |
AAAGAGTAAACAAACCTAAG+AGG | - | chr1.2:50902118-50902137 | None:intergenic | 30.0% | |
AAATTGTTACACGATGCAAT+TGG | - | chr1.2:50904395-50904414 | None:intergenic | 30.0% | |
AAGAGTAAACAAACCTAAGA+GGG | - | chr1.2:50902117-50902136 | None:intergenic | 30.0% | |
AGATTGTGTCAGTGTATTAT+AGG | + | chr1.2:50903643-50903662 | MS.gene068556:intron | 30.0% | |
CAACATAATATCTATGAAGC+GGG | + | chr1.2:50904071-50904090 | MS.gene068556:CDS | 30.0% | |
CATCTATCATCAACATGTTT+GGG | - | chr1.2:50903795-50903814 | None:intergenic | 30.0% | |
CATGACAAAACAATACTCAT+TGG | + | chr1.2:50903762-50903781 | MS.gene068556:CDS | 30.0% | |
CTATGACAAAGAGAGATTAT+AGG | + | chr1.2:50902579-50902598 | MS.gene068556:intron | 30.0% | |
TAACTTTAGCTAAGCTGAAT+AGG | + | chr1.2:50904549-50904568 | MS.gene068556:intron | 30.0% | |
TGCAAAGTGGTTTATAATGT+GGG | + | chr1.2:50902773-50902792 | MS.gene068556:intron | 30.0% | |
TGCCTATGAATGTTAGTATT+TGG | - | chr1.2:50904578-50904597 | None:intergenic | 30.0% | |
TGTAATTTAGAGATAGAAGG+AGG | + | chr1.2:50903187-50903206 | MS.gene068556:CDS | 30.0% | |
TTGCAAAGTGGTTTATAATG+TGG | + | chr1.2:50902772-50902791 | MS.gene068556:intron | 30.0% | |
! | AGTAAAGGGTATGTATGATA+GGG | + | chr1.2:50902680-50902699 | MS.gene068556:intron | 30.0% |
! | ATCAATTTAGGGATGTTTTG+AGG | + | chr1.2:50902294-50902313 | MS.gene068556:intron | 30.0% |
! | GCACTGATATTACTATTTCA+AGG | + | chr1.2:50903323-50903342 | MS.gene068556:CDS | 30.0% |
! | GTTTTTATGAATGCAGATGA+TGG | + | chr1.2:50902977-50902996 | MS.gene068556:intron | 30.0% |
! | TAGTAAAGGGTATGTATGAT+AGG | + | chr1.2:50902679-50902698 | MS.gene068556:intron | 30.0% |
! | TTTTGGTATTTATAAGGTGG+TGG | - | chr1.2:50901915-50901934 | None:intergenic | 30.0% |
!! | GAGTTTTGGTATTTATAAGG+TGG | - | chr1.2:50901918-50901937 | None:intergenic | 30.0% |
!! | TATGATGATGTTGAGAGTTT+TGG | - | chr1.2:50901932-50901951 | None:intergenic | 30.0% |
!! | TCAATTTAGGGATGTTTTGA+GGG | + | chr1.2:50902295-50902314 | MS.gene068556:intron | 30.0% |
!! | TCATTACAATTTTGACAACC+GGG | + | chr1.2:50902895-50902914 | MS.gene068556:intron | 30.0% |
!! | TTCTGGAGTAATTATTGTAC+AGG | - | chr1.2:50903896-50903915 | None:intergenic | 30.0% |
!! | TTTTAAGTATCTTCACGAGA+AGG | + | chr1.2:50904109-50904128 | MS.gene068556:CDS | 30.0% |
AAGTGGTTTATAATGTGGGA+TGG | + | chr1.2:50902777-50902796 | MS.gene068556:intron | 35.0% | |
AATGGAGGGTCTAAATTGAT+AGG | + | chr1.2:50902812-50902831 | MS.gene068556:intron | 35.0% | |
ACATCGTCAATCTGAATTCT+CGG | - | chr1.2:50903533-50903552 | None:intergenic | 35.0% | |
ACCTCAAAAACAATCCACAA+AGG | - | chr1.2:50903040-50903059 | None:intergenic | 35.0% | |
ACTTAAAAGCAACCTTCTTC+TGG | - | chr1.2:50904097-50904116 | None:intergenic | 35.0% | |
ATACAAGACCATTGATGGAA+GGG | + | chr1.2:50903102-50903121 | MS.gene068556:CDS | 35.0% | |
ATAGGCGACTGTAAATTGAA+GGG | + | chr1.2:50902830-50902849 | MS.gene068556:intron | 35.0% | |
ATCTGAATAGCATCAACATC+AGG | - | chr1.2:50903220-50903239 | None:intergenic | 35.0% | |
CAATGAACAGATAATCACCT+GGG | - | chr1.2:50903955-50903974 | None:intergenic | 35.0% | |
CTGCATTCATAAAAACCCAA+TGG | - | chr1.2:50902973-50902992 | None:intergenic | 35.0% | |
GAAGGCGACTTATTCATAAA+CGG | + | chr1.2:50905015-50905034 | MS.gene068556:CDS | 35.0% | |
GCATCTATCATCAACATGTT+TGG | - | chr1.2:50903796-50903815 | None:intergenic | 35.0% | |
GGATTCCAATACAACCTAAA+AGG | - | chr1.2:50904175-50904194 | None:intergenic | 35.0% | |
TATCATGTTACATCCCTCTT+AGG | + | chr1.2:50902101-50902120 | MS.gene068556:CDS | 35.0% | |
TATTTCAAGGTGAGATGAAC+TGG | + | chr1.2:50903336-50903355 | MS.gene068556:intron | 35.0% | |
TCAATGAACAGATAATCACC+TGG | - | chr1.2:50903956-50903975 | None:intergenic | 35.0% | |
TCATCATACAAGACCATTGA+TGG | + | chr1.2:50903097-50903116 | MS.gene068556:CDS | 35.0% | |
TGAATTCCTTCATTGTTTGC+AGG | + | chr1.2:50903724-50903743 | MS.gene068556:intron | 35.0% | |
TGTTGTTAGGGACAGAAAAA+CGG | - | chr1.2:50901884-50901903 | None:intergenic | 35.0% | |
TTGAATCCCATTTACGAAGT+CGG | + | chr1.2:50903440-50903459 | MS.gene068556:intron | 35.0% | |
! | ACTTGCTTTAGATCATCTGT+TGG | - | chr1.2:50905126-50905145 | None:intergenic | 35.0% |
! | ACTTTTGCAAATCTAACACG+AGG | - | chr1.2:50903870-50903889 | None:intergenic | 35.0% |
! | TTTTTCTGTCCCTAACAACA+CGG | + | chr1.2:50901884-50901903 | MS.gene068556:CDS | 35.0% |
!! | TGGTTTGGATTTTCTGTAGT+CGG | + | chr1.2:50903356-50903375 | MS.gene068556:intron | 35.0% |
!! | TGTTGATGATAGATGCATGA+AGG | + | chr1.2:50903800-50903819 | MS.gene068556:CDS | 35.0% |
!!! | AATTGGAAGTACCTTGGTTT+TGG | - | chr1.2:50901965-50901984 | None:intergenic | 35.0% |
!!! | ACCTTTGTGGATTGTTTTTG+AGG | + | chr1.2:50903036-50903055 | MS.gene068556:CDS | 35.0% |
!!! | AGATTCTTCTGTTTTAGCTG+TGG | - | chr1.2:50904637-50904656 | None:intergenic | 35.0% |
!!! | ATACACCACTGTTTTTTCGA+CGG | + | chr1.2:50903828-50903847 | MS.gene068556:CDS | 35.0% |
!!! | GTGGATTGTTTTTGAGGTTT+CGG | + | chr1.2:50903042-50903061 | MS.gene068556:CDS | 35.0% |
!!! | TGGATTGTTTTTGAGGTTTC+GGG | + | chr1.2:50903043-50903062 | MS.gene068556:CDS | 35.0% |
AAAATGCAGAGTCAAGGCTA+AGG | - | chr1.2:50904453-50904472 | None:intergenic | 40.0% | |
AAAGATTAAGCTGACTGGGA+AGG | + | chr1.2:50903129-50903148 | MS.gene068556:CDS | 40.0% | |
AAGATTAAGCTGACTGGGAA+GGG | + | chr1.2:50903130-50903149 | MS.gene068556:CDS | 40.0% | |
AATCCACCAAACCAAAACCA+AGG | + | chr1.2:50901951-50901970 | MS.gene068556:CDS | 40.0% | |
ACTGGCCACATAATTTCTGA+AGG | + | chr1.2:50904997-50905016 | MS.gene068556:CDS | 40.0% | |
ACTTGGCCACTAAACATAAG+AGG | - | chr1.2:50904143-50904162 | None:intergenic | 40.0% | |
AGCATATATGCCCCAATTTC+TGG | - | chr1.2:50903913-50903932 | None:intergenic | 40.0% | |
AGGCAATTTAGTCCATCCAA+CGG | + | chr1.2:50903392-50903411 | MS.gene068556:intron | 40.0% | |
AGTCGCCTTCAGAAATTATG+TGG | - | chr1.2:50905005-50905024 | None:intergenic | 40.0% | |
ATGACACCTGCAAACAATGA+AGG | - | chr1.2:50903733-50903752 | None:intergenic | 40.0% | |
CAAAGTGGTCATGTTGATGT+TGG | - | chr1.2:50901988-50902007 | None:intergenic | 40.0% | |
CAAGTTCTTCATCACTGTAC+TGG | + | chr1.2:50905141-50905160 | MS.gene068556:CDS | 40.0% | |
CATACAAGACCATTGATGGA+AGG | + | chr1.2:50903101-50903120 | MS.gene068556:CDS | 40.0% | |
CATGTTCCGACTTCGTAAAT+GGG | - | chr1.2:50903449-50903468 | None:intergenic | 40.0% | |
GATAGGCGACTGTAAATTGA+AGG | + | chr1.2:50902829-50902848 | MS.gene068556:intron | 40.0% | |
GATCAATGTTACAGCCGAAT+TGG | - | chr1.2:50902951-50902970 | None:intergenic | 40.0% | |
GCCAAAAGATTAAGCTGACT+GGG | + | chr1.2:50903125-50903144 | MS.gene068556:CDS | 40.0% | |
GGCTGTAACATTGATCCATT+GGG | + | chr1.2:50902955-50902974 | MS.gene068556:intron | 40.0% | |
GGTCATGTTGATGTTGGAAT+TGG | - | chr1.2:50901982-50902001 | None:intergenic | 40.0% | |
GGTTTATAATGTGGGATGGA+GGG | + | chr1.2:50902781-50902800 | MS.gene068556:intron | 40.0% | |
GTCGAAAAAACAGTGGTGTA+TGG | - | chr1.2:50903829-50903848 | None:intergenic | 40.0% | |
GTCGCAAAAAAGAACCTTTG+TGG | + | chr1.2:50903023-50903042 | MS.gene068556:CDS | 40.0% | |
TACAAGACCATTGATGGAAG+GGG | + | chr1.2:50903103-50903122 | MS.gene068556:CDS | 40.0% | |
TCATAAACGGTGCTCAATCA+GGG | + | chr1.2:50905028-50905047 | MS.gene068556:CDS | 40.0% | |
TCATGTTCCGACTTCGTAAA+TGG | - | chr1.2:50903450-50903469 | None:intergenic | 40.0% | |
TGGTTTATAATGTGGGATGG+AGG | + | chr1.2:50902780-50902799 | MS.gene068556:intron | 40.0% | |
TGTCTGCCTCTTATGTTTAG+TGG | + | chr1.2:50904134-50904153 | MS.gene068556:intron | 40.0% | |
TGTTACACGATGCAATTGGT+TGG | - | chr1.2:50904391-50904410 | None:intergenic | 40.0% | |
TTCATAAACGGTGCTCAATC+AGG | + | chr1.2:50905027-50905046 | MS.gene068556:CDS | 40.0% | |
TTCTTCATCACTGTACTGGA+TGG | + | chr1.2:50905145-50905164 | MS.gene068556:CDS | 40.0% | |
! | AATTGGTGACATCTCTTTGC+AGG | + | chr1.2:50904951-50904970 | MS.gene068556:intron | 40.0% |
! | ATATGCTGTTTGTGCAAGTG+TGG | + | chr1.2:50903926-50903945 | MS.gene068556:CDS | 40.0% |
! | CATGTCTGATAGTGTTCACT+GGG | - | chr1.2:50905090-50905109 | None:intergenic | 40.0% |
! | GGTTTGGATTTTCTGTAGTC+GGG | + | chr1.2:50903357-50903376 | MS.gene068556:intron | 40.0% |
! | TAGTCGGGAAATTTTCTGTC+AGG | + | chr1.2:50903372-50903391 | MS.gene068556:intron | 40.0% |
! | TCCCAGTCAGCTTAATCTTT+TGG | - | chr1.2:50903129-50903148 | None:intergenic | 40.0% |
! | TGCTTTAGATCATCTGTTGG+AGG | - | chr1.2:50905123-50905142 | None:intergenic | 40.0% |
! | TGGTATTTATAAGGTGGTGG+AGG | - | chr1.2:50901912-50901931 | None:intergenic | 40.0% |
!! | TATGAATGCAGATGATGGAC+CGG | + | chr1.2:50902982-50903001 | MS.gene068556:intron | 40.0% |
!! | TGTTGGAATTGGAAGTACCT+TGG | - | chr1.2:50901971-50901990 | None:intergenic | 40.0% |
!!! | GAAGTACCTTGGTTTTGGTT+TGG | - | chr1.2:50901960-50901979 | None:intergenic | 40.0% |
!!! | GGAGGGAGTATTTTAATGGA+GGG | + | chr1.2:50902798-50902817 | MS.gene068556:intron | 40.0% |
!!! | GGATGGAGGGAGTATTTTAA+TGG | + | chr1.2:50902794-50902813 | MS.gene068556:intron | 40.0% |
!!! | TGGAGGGAGTATTTTAATGG+AGG | + | chr1.2:50902797-50902816 | MS.gene068556:intron | 40.0% |
AATGCATGTTGTCCGTTGGA+TGG | - | chr1.2:50903407-50903426 | None:intergenic | 45.0% | |
ACACTATCAGACATGGACAG+TGG | + | chr1.2:50905095-50905114 | MS.gene068556:CDS | 45.0% | |
ACTTTCCATACCACTTGTCG+AGG | + | chr1.2:50904665-50904684 | MS.gene068556:intron | 45.0% | |
AGATTAAGCTGACTGGGAAG+GGG | + | chr1.2:50903131-50903150 | MS.gene068556:CDS | 45.0% | |
CAAGGTGAGATGAACTGGTT+TGG | + | chr1.2:50903341-50903360 | MS.gene068556:intron | 45.0% | |
CCAGTGAACACTATCAGACA+TGG | + | chr1.2:50905088-50905107 | MS.gene068556:CDS | 45.0% | |
CGGCTGTAACATTGATCCAT+TGG | + | chr1.2:50902954-50902973 | MS.gene068556:intron | 45.0% | |
GGCCAAAAGATTAAGCTGAC+TGG | + | chr1.2:50903124-50903143 | MS.gene068556:CDS | 45.0% | |
GGCTGATGACAGAGAATGTT+GGG | + | chr1.2:50905049-50905068 | MS.gene068556:CDS | 45.0% | |
GTCATGCAAACCGAACCATT+TGG | - | chr1.2:50903488-50903507 | None:intergenic | 45.0% | |
TCACCTCTTGTTCCTCTCAA+GGG | + | chr1.2:50904487-50904506 | MS.gene068556:intron | 45.0% | |
TCAGAATGCATGTTGTCCGT+TGG | - | chr1.2:50903411-50903430 | None:intergenic | 45.0% | |
TTAGAGATAGAAGGAGGCAG+AGG | + | chr1.2:50903193-50903212 | MS.gene068556:CDS | 45.0% | |
TTCACCTCTTGTTCCTCTCA+AGG | + | chr1.2:50904486-50904505 | MS.gene068556:intron | 45.0% | |
! | CCATGTCTGATAGTGTTCAC+TGG | - | chr1.2:50905091-50905110 | None:intergenic | 45.0% |
! | GAGTACCGTCGAAAAAACAG+TGG | - | chr1.2:50903836-50903855 | None:intergenic | 45.0% |
!! | ATGAATGCAGATGATGGACC+GGG | + | chr1.2:50902983-50903002 | MS.gene068556:intron | 45.0% |
!!! | GTACCTTGGTTTTGGTTTGG+TGG | - | chr1.2:50901957-50901976 | None:intergenic | 45.0% |
AAGCCCTTGAGAGGAACAAG+AGG | - | chr1.2:50904493-50904512 | None:intergenic | 50.0% | |
ATAGGGACAAAGCCCTTGAG+AGG | - | chr1.2:50904502-50904521 | None:intergenic | 50.0% | |
ATTGACGATGTGTGCACGCA+TGG | + | chr1.2:50903542-50903561 | MS.gene068556:intron | 50.0% | |
GACAAGGATGCTGAAGCAAC+TGG | + | chr1.2:50904979-50904998 | MS.gene068556:CDS | 50.0% | |
GAGATGTCGGCGTTAACGTA+AGG | - | chr1.2:50902011-50902030 | None:intergenic | 50.0% | |
GGCGTTAACGTAAGGCAAAG+TGG | - | chr1.2:50902003-50902022 | None:intergenic | 50.0% | |
GGGCTCATTGATATCACTCG+AGG | + | chr1.2:50903298-50903317 | MS.gene068556:CDS | 50.0% | |
GGGCTGATGACAGAGAATGT+TGG | + | chr1.2:50905048-50905067 | MS.gene068556:CDS | 50.0% | |
TCGAGGCTCGAGGGTAAATT+TGG | + | chr1.2:50904682-50904701 | MS.gene068556:intron | 50.0% | |
TTGACGATGTGTGCACGCAT+GGG | + | chr1.2:50903543-50903562 | MS.gene068556:intron | 50.0% | |
TTGTGCAAGTGTGGAATCCC+AGG | + | chr1.2:50903935-50903954 | MS.gene068556:CDS | 50.0% | |
! | CTTTTGGCCCCTTCCATCAA+TGG | - | chr1.2:50903113-50903132 | None:intergenic | 50.0% |
! | GCTGCTCAAGCTGAAGGTTT+TGG | + | chr1.2:50902044-50902063 | MS.gene068556:CDS | 50.0% |
! | GTGGAGGAACCGTGTTGTTA+GGG | - | chr1.2:50901896-50901915 | None:intergenic | 50.0% |
! | TTTTCGACGGTACTCGACAG+AGG | + | chr1.2:50903841-50903860 | MS.gene068556:CDS | 50.0% |
AACCTTCAGCTTGAGCAGCG+AGG | - | chr1.2:50902043-50902062 | None:intergenic | 55.0% | |
ACCTTCAGCTTGAGCAGCGA+GGG | - | chr1.2:50902042-50902061 | None:intergenic | 55.0% | |
ATACCACTTGTCGAGGCTCG+AGG | + | chr1.2:50904672-50904691 | MS.gene068556:intron | 55.0% | |
CAAGTCCACCGATAGCGCAA+CGG | - | chr1.2:50902070-50902089 | None:intergenic | 55.0% | |
CATCCATCGCGCAATGATCC+CGG | - | chr1.2:50903004-50903023 | None:intergenic | 55.0% | |
CTATGAAGCGGGCCAGAAGA+AGG | + | chr1.2:50904082-50904101 | MS.gene068556:CDS | 55.0% | |
CTCTTTGCAGGCAGCAGACA+AGG | + | chr1.2:50904963-50904982 | MS.gene068556:intron | 55.0% | |
CTGGATGGCAATCTGTTGCG+AGG | + | chr1.2:50905160-50905179 | MS.gene068556:CDS | 55.0% | |
GAGGGAACGGAGAGAGATGT+CGG | - | chr1.2:50902024-50902043 | None:intergenic | 55.0% | |
TACCACTTGTCGAGGCTCGA+GGG | + | chr1.2:50904673-50904692 | MS.gene068556:intron | 55.0% | |
TCGAGCCTCGACAAGTGGTA+TGG | - | chr1.2:50904673-50904692 | None:intergenic | 55.0% | |
! | GGTGGAGGAACCGTGTTGTT+AGG | - | chr1.2:50901897-50901916 | None:intergenic | 55.0% |
! | TGCGCTATCGGTGGACTTGA+TGG | + | chr1.2:50902071-50902090 | MS.gene068556:CDS | 55.0% |
!! | GGTTTTGGCCGTTGCGCTAT+CGG | + | chr1.2:50902059-50902078 | MS.gene068556:CDS | 55.0% |
AGCTGACTGGGAAGGGGCTT+AGG | + | chr1.2:50903137-50903156 | MS.gene068556:CDS | 60.0% | |
CAGCTTGAGCAGCGAGGGAA+CGG | - | chr1.2:50902037-50902056 | None:intergenic | 60.0% | |
GCAATCTGTTGCGAGGCCAG+CGG | + | chr1.2:50905167-50905186 | MS.gene068556:CDS | 60.0% | |
TACCCTCGAGCCTCGACAAG+TGG | - | chr1.2:50904678-50904697 | None:intergenic | 60.0% | |
TCCCTCGCTGCTCAAGCTGA+AGG | + | chr1.2:50902038-50902057 | MS.gene068556:CDS | 60.0% | |
TTTGGCCGTTGCGCTATCGG+TGG | + | chr1.2:50902062-50902081 | MS.gene068556:CDS | 60.0% | |
GGACCGGGATCATTGCGCGA+TGG | + | chr1.2:50902998-50903017 | MS.gene068556:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 50901846 | 50905203 | 50901846 | ID=MS.gene068556 |
chr1.2 | mRNA | 50901846 | 50905203 | 50901846 | ID=MS.gene068556.t1;Parent=MS.gene068556 |
chr1.2 | exon | 50901846 | 50902122 | 50901846 | ID=MS.gene068556.t1.exon1;Parent=MS.gene068556.t1 |
chr1.2 | CDS | 50901846 | 50902122 | 50901846 | ID=cds.MS.gene068556.t1;Parent=MS.gene068556.t1 |
chr1.2 | exon | 50902993 | 50903344 | 50902993 | ID=MS.gene068556.t1.exon2;Parent=MS.gene068556.t1 |
chr1.2 | CDS | 50902993 | 50903344 | 50902993 | ID=cds.MS.gene068556.t1;Parent=MS.gene068556.t1 |
chr1.2 | exon | 50903746 | 50903956 | 50903746 | ID=MS.gene068556.t1.exon3;Parent=MS.gene068556.t1 |
chr1.2 | CDS | 50903746 | 50903956 | 50903746 | ID=cds.MS.gene068556.t1;Parent=MS.gene068556.t1 |
chr1.2 | exon | 50904062 | 50904130 | 50904062 | ID=MS.gene068556.t1.exon4;Parent=MS.gene068556.t1 |
chr1.2 | CDS | 50904062 | 50904130 | 50904062 | ID=cds.MS.gene068556.t1;Parent=MS.gene068556.t1 |
chr1.2 | exon | 50904973 | 50905203 | 50904973 | ID=MS.gene068556.t1.exon5;Parent=MS.gene068556.t1 |
chr1.2 | CDS | 50904973 | 50905203 | 50904973 | ID=cds.MS.gene068556.t1;Parent=MS.gene068556.t1 |
Gene Sequence |
Protein sequence |