Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06864.t1 | XP_024635978.1 | 97.7 | 656 | 14 | 1 | 14 | 669 | 1 | 655 | 0.00E+00 | 1281.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06864.t1 | Q2EF88 | 76.5 | 652 | 149 | 3 | 19 | 669 | 12 | 660 | 2.8e-293 | 1008.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06864.t1 | G7J868 | 97.7 | 656 | 14 | 1 | 14 | 669 | 1 | 655 | 0.0e+00 | 1281.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057201 | MS.gene06864 | 0.933411 | 1.95E-95 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene004968 | MS.gene06864 | PPI |
| MS.gene07505 | MS.gene06864 | PPI |
| MS.gene86821 | MS.gene06864 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06864.t1 | MTR_3g092090 | 97.565 | 657 | 15 | 1 | 14 | 670 | 1 | 656 | 0.0 | 1317 |
| MS.gene06864.t1 | MTR_3g092090 | 97.710 | 655 | 14 | 1 | 14 | 668 | 1 | 654 | 0.0 | 1315 |
| MS.gene06864.t1 | MTR_1g007580 | 75.301 | 664 | 155 | 5 | 14 | 670 | 1 | 662 | 0.0 | 1027 |
| MS.gene06864.t1 | MTR_0312s0020 | 74.659 | 659 | 160 | 5 | 18 | 670 | 5 | 662 | 0.0 | 1008 |
| MS.gene06864.t1 | MTR_1g007540 | 74.659 | 659 | 160 | 5 | 18 | 670 | 5 | 662 | 0.0 | 1008 |
| MS.gene06864.t1 | MTR_1g077840 | 64.955 | 662 | 216 | 4 | 17 | 670 | 17 | 670 | 0.0 | 905 |
| MS.gene06864.t1 | MTR_7g028250 | 54.114 | 632 | 284 | 2 | 45 | 670 | 35 | 666 | 0.0 | 753 |
| MS.gene06864.t1 | MTR_5g091600 | 55.723 | 664 | 283 | 6 | 14 | 670 | 1 | 660 | 0.0 | 747 |
| MS.gene06864.t1 | MTR_6g077870 | 52.950 | 661 | 293 | 7 | 21 | 670 | 37 | 690 | 0.0 | 734 |
| MS.gene06864.t1 | MTR_3g063490 | 54.519 | 675 | 288 | 7 | 3 | 670 | 12 | 674 | 0.0 | 729 |
| MS.gene06864.t1 | MTR_3g063520 | 54.478 | 670 | 284 | 6 | 19 | 670 | 2 | 668 | 0.0 | 713 |
| MS.gene06864.t1 | MTR_6g077870 | 55.303 | 528 | 222 | 5 | 154 | 670 | 5 | 529 | 0.0 | 607 |
| MS.gene06864.t1 | MTR_1626s0010 | 71.489 | 235 | 65 | 1 | 226 | 458 | 1 | 235 | 1.03e-120 | 359 |
| MS.gene06864.t1 | MTR_0312s0050 | 71.074 | 121 | 30 | 2 | 14 | 130 | 1 | 120 | 1.81e-47 | 163 |
| MS.gene06864.t1 | MTR_5g091615 | 60.417 | 144 | 56 | 1 | 528 | 670 | 57 | 200 | 6.03e-47 | 168 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06864.t1 | AT5G53550 | 75.836 | 658 | 157 | 2 | 14 | 670 | 5 | 661 | 0.0 | 1036 |
| MS.gene06864.t1 | AT5G53550 | 75.836 | 658 | 157 | 2 | 14 | 670 | 5 | 661 | 0.0 | 1036 |
| MS.gene06864.t1 | AT5G53550 | 75.836 | 658 | 157 | 2 | 14 | 670 | 5 | 661 | 0.0 | 1036 |
| MS.gene06864.t1 | AT5G53550 | 75.836 | 658 | 157 | 2 | 14 | 670 | 5 | 661 | 0.0 | 1036 |
| MS.gene06864.t1 | AT5G53550 | 75.836 | 658 | 157 | 2 | 14 | 670 | 5 | 661 | 0.0 | 1036 |
| MS.gene06864.t1 | AT5G24380 | 71.603 | 655 | 175 | 5 | 25 | 670 | 1 | 653 | 0.0 | 988 |
| MS.gene06864.t1 | AT4G24120 | 64.286 | 658 | 227 | 4 | 17 | 670 | 10 | 663 | 0.0 | 907 |
| MS.gene06864.t1 | AT5G53550 | 77.756 | 499 | 111 | 0 | 172 | 670 | 1 | 499 | 0.0 | 818 |
| MS.gene06864.t1 | AT1G65730 | 57.594 | 665 | 267 | 8 | 17 | 670 | 5 | 665 | 0.0 | 783 |
| MS.gene06864.t1 | AT5G41000 | 54.021 | 659 | 293 | 4 | 22 | 670 | 2 | 660 | 0.0 | 753 |
| MS.gene06864.t1 | AT3G27020 | 52.036 | 663 | 305 | 5 | 16 | 670 | 6 | 663 | 0.0 | 732 |
| MS.gene06864.t1 | AT5G41000 | 52.527 | 653 | 287 | 4 | 22 | 670 | 2 | 635 | 0.0 | 714 |
| MS.gene06864.t1 | AT1G48370 | 52.080 | 697 | 283 | 5 | 20 | 670 | 9 | 700 | 0.0 | 701 |
| MS.gene06864.t1 | AT3G17650 | 55.280 | 644 | 269 | 6 | 41 | 670 | 52 | 690 | 0.0 | 698 |
| MS.gene06864.t1 | AT3G17650 | 55.280 | 644 | 269 | 6 | 41 | 670 | 52 | 690 | 0.0 | 698 |
| MS.gene06864.t1 | AT1G48370 | 55.932 | 531 | 219 | 3 | 155 | 670 | 7 | 537 | 0.0 | 573 |
| MS.gene06864.t1 | AT5G41000 | 54.959 | 484 | 211 | 3 | 194 | 670 | 1 | 484 | 0.0 | 563 |
| MS.gene06864.t1 | AT5G45450 | 54.545 | 198 | 83 | 2 | 474 | 670 | 1 | 192 | 6.05e-62 | 206 |
Find 150 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATAGAAACATGGCAATTT+TGG | 0.087728 | 3.1:+74102913 | MS.gene06864:CDS |
| CTTTCTTCTTCATTGCTTCT+AGG | 0.098551 | 3.1:-74100097 | None:intergenic |
| GCTACTGCTGTTCTTATTAA+TGG | 0.102732 | 3.1:+74101471 | MS.gene06864:CDS |
| CATCAAGAGGCAACGGTTTC+TGG | 0.144768 | 3.1:-74102379 | None:intergenic |
| ATTTCCATTGCCTTGATTCT+TGG | 0.193274 | 3.1:+74102139 | MS.gene06864:CDS |
| TTTGTTCAATTTCCTACTTT+TGG | 0.201094 | 3.1:+74101714 | MS.gene06864:CDS |
| ATTTGCTATAGTAGCTAATT+TGG | 0.203777 | 3.1:+74102997 | MS.gene06864:CDS |
| ATCCATTCTCGCTTTGTTAA+AGG | 0.211152 | 3.1:+74103237 | MS.gene06864:CDS |
| TTCTTGGTGCTGTGGTTTCT+TGG | 0.236646 | 3.1:+74101933 | MS.gene06864:CDS |
| GTGATAATTGTAGGTGGTTT+TGG | 0.241603 | 3.1:+74100967 | MS.gene06864:intron |
| ATGATTCCTGCAGTTGCTTC+TGG | 0.250260 | 3.1:+74103178 | MS.gene06864:CDS |
| GTTAATTTATCATTACTTCT+TGG | 0.262551 | 3.1:+74101917 | MS.gene06864:CDS |
| CTCGGCTTCTGCAATGCTTA+TGG | 0.273052 | 3.1:+74102563 | MS.gene06864:CDS |
| AGCTACTTTCCCGTAGTTAT+AGG | 0.273083 | 3.1:-74102612 | None:intergenic |
| AGGCAACGGTTTCTGGTTAC+TGG | 0.282115 | 3.1:-74102372 | None:intergenic |
| AGACTCCTCATGCTACTTTC+TGG | 0.288803 | 3.1:-74102013 | None:intergenic |
| AAATATTACTACCTTTCTAA+TGG | 0.292121 | 3.1:-74101142 | None:intergenic |
| CTAGGTAGAATGTTCGGATT+TGG | 0.292172 | 3.1:+74103293 | MS.gene06864:intron |
| TCTTGGTGCTGTGGTTTCTT+GGG | 0.298595 | 3.1:+74101934 | MS.gene06864:CDS |
| CAAGAGAAAACATTCCTATA+TGG | 0.305526 | 3.1:+74102426 | MS.gene06864:CDS |
| CTAATAGCTAGTCTTATAAT+TGG | 0.306234 | 3.1:+74100220 | MS.gene06864:CDS |
| TCACATCTCCTTTAGGAGTA+TGG | 0.316180 | 3.1:-74101497 | None:intergenic |
| GGTGTAGTTGCTGGACTTGT+AGG | 0.321187 | 3.1:+74102671 | MS.gene06864:CDS |
| TTTGTGCTTGCCGCCTTAGC+TGG | 0.321202 | 3.1:+74102638 | MS.gene06864:CDS |
| CTTACTTATTGGGGTTGAAT+AGG | 0.324163 | 3.1:+74100992 | MS.gene06864:CDS |
| AATATTACTACCTTTCTAAT+GGG | 0.327178 | 3.1:-74101141 | None:intergenic |
| AATGTTTCTGCTGCTCTACT+TGG | 0.337923 | 3.1:+74100304 | MS.gene06864:CDS |
| GCTAATTTGGTAAGAGATCT+TGG | 0.343946 | 3.1:+74103010 | MS.gene06864:CDS |
| TTTCCCAGGAAGCAGGTTCA+TGG | 0.348721 | 3.1:+74101615 | MS.gene06864:intron |
| TTGGCCATCACATCTCCTTT+AGG | 0.349476 | 3.1:-74101504 | None:intergenic |
| TGAAGAGGGTCAAGTGGCTT+TGG | 0.350110 | 3.1:+74100144 | MS.gene06864:CDS |
| CAGCAGAAACATTGAGATTA+GGG | 0.371403 | 3.1:-74100294 | None:intergenic |
| AGAATGTTCGGATTTGGATT+TGG | 0.378496 | 3.1:+74103299 | MS.gene06864:CDS |
| CCTTTAATCAAGGGACTAAA+AGG | 0.382404 | 3.1:+74101968 | MS.gene06864:CDS |
| AGCTAAAAGTCCAACAAAAC+TGG | 0.385920 | 3.1:-74101112 | None:intergenic |
| CAAGCAATTGGAACAGCAAT+AGG | 0.388777 | 3.1:+74102797 | MS.gene06864:CDS |
| ATTGCCTTGATTCTTGGTGA+TGG | 0.390268 | 3.1:+74102145 | MS.gene06864:CDS |
| ATGGCATATGCTGAACAAAA+AGG | 0.393790 | 3.1:+74103144 | MS.gene06864:CDS |
| GCAGCAGAAACATTGAGATT+AGG | 0.397117 | 3.1:-74100295 | None:intergenic |
| GCTGTCATCCAACCAATTGC+AGG | 0.397989 | 3.1:-74101075 | None:intergenic |
| TTGCCTTGATTCTTGGTGAT+GGG | 0.403326 | 3.1:+74102146 | MS.gene06864:CDS |
| GTTGCTTCTGGTTTGATTTG+TGG | 0.403400 | 3.1:+74103190 | MS.gene06864:CDS |
| CTATTGCTGTTCCAATTGCT+TGG | 0.404380 | 3.1:-74102796 | None:intergenic |
| CCTATATGGTTGGCATGTAC+AGG | 0.406055 | 3.1:+74102440 | MS.gene06864:CDS |
| GAGGAGTCTCAATGGTTATA+AGG | 0.419961 | 3.1:+74102027 | MS.gene06864:CDS |
| TCATTGCTTCTAGGATCCAT+TGG | 0.423466 | 3.1:-74100088 | None:intergenic |
| TTCTGCAATGCTTATGGTGC+TGG | 0.424165 | 3.1:+74102569 | MS.gene06864:CDS |
| TCCCATCTAGGTAGAATGTT+CGG | 0.426310 | 3.1:+74103287 | MS.gene06864:intron |
| ATGAACATGGCCTATAACTA+CGG | 0.432565 | 3.1:+74102602 | MS.gene06864:CDS |
| AGGAAACAAATAACAGTTAG+AGG | 0.435356 | 3.1:+74100196 | MS.gene06864:CDS |
| TTTCTATATATAATAGCATA+TGG | 0.439609 | 3.1:-74102899 | None:intergenic |
| TGGATTCGTGAAATTCTTCT+CGG | 0.439741 | 3.1:+74101635 | MS.gene06864:CDS |
| TTCTTTCAGTGGTTCTTCAC+CGG | 0.441235 | 3.1:+74101675 | MS.gene06864:CDS |
| GTTTCGTGTTTATTCGAAGT+TGG | 0.443395 | 3.1:+74100326 | MS.gene06864:CDS |
| ACTGTTATTTGTTTCCTCCA+TGG | 0.443580 | 3.1:-74100190 | None:intergenic |
| CACAATTGCAAGCAATGATC+TGG | 0.443822 | 3.1:-74102959 | None:intergenic |
| TGATTTGTGGAGATGGATTG+TGG | 0.443828 | 3.1:+74103203 | MS.gene06864:CDS |
| CTACTTTCTGGTATACTAGC+AGG | 0.446822 | 3.1:-74102001 | None:intergenic |
| CATCATGTGGCCTTTAATCA+AGG | 0.447164 | 3.1:+74101958 | MS.gene06864:CDS |
| GTTATAGGCCATGTTCATAT+CGG | 0.447379 | 3.1:-74102597 | None:intergenic |
| ATCATTACTTCTTGGTGCTG+TGG | 0.449328 | 3.1:+74101925 | MS.gene06864:CDS |
| ATGCTTGTAAGCCAAGCAAT+TGG | 0.450560 | 3.1:+74102785 | MS.gene06864:CDS |
| CAACTTCTTTCCCAGGAAGC+AGG | 0.452937 | 3.1:+74101608 | MS.gene06864:intron |
| CCAACCAATTGCAGGCTCCT+TGG | 0.459143 | 3.1:-74101067 | None:intergenic |
| AAAAGTGATGGTGTAGTTGC+TGG | 0.461342 | 3.1:+74102662 | MS.gene06864:CDS |
| GATTACAACGATTGAGATGA+TGG | 0.461979 | 3.1:-74102477 | None:intergenic |
| CATGCTTGCAATCCAAAAGT+AGG | 0.463508 | 3.1:-74101726 | None:intergenic |
| TTCACCTGAGGGAACATCAA+TGG | 0.466222 | 3.1:-74102500 | None:intergenic |
| TCTGGTTTGATTTGTGGAGA+TGG | 0.470689 | 3.1:+74103196 | MS.gene06864:CDS |
| ATGAAACTCAATCTCACTAC+TGG | 0.473510 | 3.1:+74100265 | MS.gene06864:CDS |
| TCACCTGAGGGAACATCAAT+GGG | 0.475560 | 3.1:-74102499 | None:intergenic |
| CTTGGTGCTGTGGTTTCTTG+GGG | 0.477037 | 3.1:+74101935 | MS.gene06864:CDS |
| GATTTCAGTATGACTTATGT+TGG | 0.478042 | 3.1:+74101869 | MS.gene06864:CDS |
| AGTACCAAGGAGCCTGCAAT+TGG | 0.478104 | 3.1:+74101063 | MS.gene06864:CDS |
| AGTATGACTTATGTTGGAGC+AGG | 0.480669 | 3.1:+74101875 | MS.gene06864:CDS |
| AACCTTTAACAAAGCGAGAA+TGG | 0.486612 | 3.1:-74103239 | None:intergenic |
| TTGATGCATGATTTGAAGAC+TGG | 0.491943 | 3.1:+74102734 | MS.gene06864:CDS |
| AGCTTTGGTCCCCATTAGAA+AGG | 0.492724 | 3.1:+74101131 | MS.gene06864:CDS |
| GGAGCCTTGTAAATACCATC+TGG | 0.494006 | 3.1:-74102878 | None:intergenic |
| AATGGATTCCATACTCCTAA+AGG | 0.499986 | 3.1:+74101489 | MS.gene06864:CDS |
| GGTTCCACTTCCAATGGCTA+TGG | 0.502799 | 3.1:+74103054 | MS.gene06864:CDS |
| GTATTCTCTTGTCTAGTGAA+TGG | 0.504845 | 3.1:-74100385 | None:intergenic |
| ACTTATTGGGGTTGAATAGG+AGG | 0.507032 | 3.1:+74100995 | MS.gene06864:CDS |
| AGGAGGACTTATGAGCAAGC+AGG | 0.511921 | 3.1:+74101012 | MS.gene06864:CDS |
| AACAGCAGTAGCAGTTCCAC+TGG | 0.515210 | 3.1:-74101460 | None:intergenic |
| GCAGTTTGATTGTGTTTGCA+TGG | 0.516966 | 3.1:+74103125 | MS.gene06864:CDS |
| TTGTTTGGGCATTCTTTCAG+TGG | 0.523035 | 3.1:+74101664 | MS.gene06864:CDS |
| AAGCCCATCACCAAGAATCA+AGG | 0.526795 | 3.1:-74102149 | None:intergenic |
| CCTGTACATGCCAACCATAT+AGG | 0.529263 | 3.1:-74102440 | None:intergenic |
| AATCCCATTGATGTTCCCTC+AGG | 0.531314 | 3.1:+74102496 | MS.gene06864:CDS |
| TGGTTTCTTGGGGCATCATG+TGG | 0.532153 | 3.1:+74101945 | MS.gene06864:CDS |
| AAAGGCACAGCCATAGCCAT+TGG | 0.535040 | 3.1:-74103064 | None:intergenic |
| CATGTTGGCATGGATATTTG+TGG | 0.538954 | 3.1:-74102203 | None:intergenic |
| TCAAGGGACTAAAAGGAGAA+TGG | 0.544830 | 3.1:+74101975 | MS.gene06864:CDS |
| CATTGCTTGCAATTGTGTTG+TGG | 0.546205 | 3.1:+74102965 | MS.gene06864:CDS |
| CCAAGGAGCCTGCAATTGGT+TGG | 0.548985 | 3.1:+74101067 | MS.gene06864:CDS |
| TACTGCACAAGTTTGAATGA+TGG | 0.550626 | 3.1:-74100407 | None:intergenic |
| AAATCCAGATGGTATTTACA+AGG | 0.553711 | 3.1:+74102874 | MS.gene06864:CDS |
| GTACTACCAGGAGTATTCCC+TGG | 0.553929 | 3.1:-74101045 | None:intergenic |
| GTTGCTGGACTTGTAGGGTG+TGG | 0.557924 | 3.1:+74102677 | MS.gene06864:CDS |
| TGCTATAGCATCGCTGTAGG+AGG | 0.558415 | 3.1:+74100433 | MS.gene06864:CDS |
| TTCACCGGTGGAGATAATTG+TGG | 0.560104 | 3.1:+74101690 | MS.gene06864:CDS |
| TGAACATGGCCTATAACTAC+GGG | 0.561537 | 3.1:+74102603 | MS.gene06864:CDS |
| ACAGCCATAGCCATTGGAAG+TGG | 0.562685 | 3.1:-74103058 | None:intergenic |
| AGTAGCATGAGGAGTCTCAA+TGG | 0.563553 | 3.1:+74102019 | MS.gene06864:CDS |
| CAAGCAGGGATTGATACACC+AGG | 0.567204 | 3.1:+74101027 | MS.gene06864:CDS |
| AGAAAACATTCCTATATGGT+TGG | 0.567556 | 3.1:+74102430 | MS.gene06864:CDS |
| TTTGATGTTGGAAATCCAGA+TGG | 0.571652 | 3.1:+74102863 | MS.gene06864:CDS |
| TTTCAGTGGTTCTTCACCGG+TGG | 0.574136 | 3.1:+74101678 | MS.gene06864:CDS |
| TACTCCTAAAGGAGATGTGA+TGG | 0.575555 | 3.1:+74101500 | MS.gene06864:CDS |
| ATCACCAAGAATCAAGGCAA+TGG | 0.577080 | 3.1:-74102143 | None:intergenic |
| ACTGCCTACACACATATCAA+TGG | 0.578744 | 3.1:-74103107 | None:intergenic |
| GCAGGCTCCTTGGTACTACC+AGG | 0.579102 | 3.1:-74101057 | None:intergenic |
| ACAAAATACCACTTCACCTG+AGG | 0.579884 | 3.1:-74102512 | None:intergenic |
| TGATGTTCCCTCAGGTGAAG+TGG | 0.583774 | 3.1:+74102504 | MS.gene06864:CDS |
| GATACACCAGGGAATACTCC+TGG | 0.584209 | 3.1:+74101039 | MS.gene06864:CDS |
| GAGATGGGTTCCACTTCCAA+TGG | 0.587735 | 3.1:+74103048 | MS.gene06864:CDS |
| CTATATGGTTGGCATGTACA+GGG | 0.588281 | 3.1:+74102441 | MS.gene06864:CDS |
| AACAAAGCGAGAATGGATGA+AGG | 0.588783 | 3.1:-74103232 | None:intergenic |
| GCATTGCAGAAGCCGAGCGA+GGG | 0.592829 | 3.1:-74102557 | None:intergenic |
| ATCAAACCAGAAGCAACTGC+AGG | 0.595717 | 3.1:-74103184 | None:intergenic |
| GGAGGACTTATGAGCAAGCA+GGG | 0.597449 | 3.1:+74101013 | MS.gene06864:CDS |
| GGAGGAATCTGTGAATCCAA+TGG | 0.600474 | 3.1:+74100072 | MS.gene06864:CDS |
| ATATTACTACCTTTCTAATG+GGG | 0.600914 | 3.1:-74101140 | None:intergenic |
| CAAAATACCACTTCACCTGA+GGG | 0.601804 | 3.1:-74102511 | None:intergenic |
| CTGAGATCATCAAGAGGCAA+CGG | 0.603310 | 3.1:-74102386 | None:intergenic |
| GTGTAGTTGCTGGACTTGTA+GGG | 0.605151 | 3.1:+74102672 | MS.gene06864:CDS |
| TACTTTCTGGTATACTAGCA+GGG | 0.607935 | 3.1:-74102000 | None:intergenic |
| ATCATGTGGCCTTTAATCAA+GGG | 0.610873 | 3.1:+74101959 | MS.gene06864:CDS |
| TGCTATTATATATAGAAACA+TGG | 0.616203 | 3.1:+74102904 | MS.gene06864:CDS |
| AATCATCATCACATTGAAGA+GGG | 0.616737 | 3.1:+74100130 | MS.gene06864:CDS |
| AAATCCACAATTATCTCCAC+CGG | 0.617289 | 3.1:-74101694 | None:intergenic |
| TTTGCCATTGATATGTGTGT+AGG | 0.620759 | 3.1:+74103103 | MS.gene06864:CDS |
| TGGATTAACCGATATGAACA+TGG | 0.621595 | 3.1:+74102589 | MS.gene06864:CDS |
| GAATCATCATCACATTGAAG+AGG | 0.626811 | 3.1:+74100129 | MS.gene06864:CDS |
| TCACATTGAAGAGGGTCAAG+TGG | 0.632388 | 3.1:+74100138 | MS.gene06864:CDS |
| AGCATTGCAGAAGCCGAGCG+AGG | 0.633923 | 3.1:-74102558 | None:intergenic |
| GTGGCGAAGTCAGAGTGAGA+TGG | 0.637116 | 3.1:-74102757 | None:intergenic |
| GCTTGCTATAGCATCGCTGT+AGG | 0.647898 | 3.1:+74100430 | MS.gene06864:CDS |
| GATTGGTTCAATCACAGTGG+AGG | 0.656647 | 3.1:+74100054 | MS.gene06864:CDS |
| ACAGCAGTAGCAGTTCCACT+GGG | 0.662632 | 3.1:-74101459 | None:intergenic |
| TTTCGTCTGAGATCATCAAG+AGG | 0.663470 | 3.1:-74102392 | None:intergenic |
| GTATACCAGAAAGTAGCATG+AGG | 0.678156 | 3.1:+74102008 | MS.gene06864:CDS |
| GAATACTCCTGGTAGTACCA+AGG | 0.678175 | 3.1:+74101050 | MS.gene06864:CDS |
| TACAAATTAACTTATCCCAG+TGG | 0.686829 | 3.1:+74101444 | MS.gene06864:CDS |
| TGGCTTACAAGCATCGAACG+TGG | 0.698607 | 3.1:-74102776 | None:intergenic |
| TGAATAGAATAGCACCATGG+AGG | 0.711294 | 3.1:+74100176 | MS.gene06864:CDS |
| AAGCAGGGATTGATACACCA+GGG | 0.727787 | 3.1:+74101028 | MS.gene06864:CDS |
| GATGATTGGTTCAATCACAG+TGG | 0.734769 | 3.1:+74100051 | None:intergenic |
| AGTTGAATAGAATAGCACCA+TGG | 0.738039 | 3.1:+74100173 | MS.gene06864:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATCTATTTATCCAAAA+AGG | - | chr3.1:74100690-74100709 | None:intergenic | 15.0% |
| !! | CAAAAAAAGTTAAAAAGAAA+AGG | - | chr3.1:74101546-74101565 | None:intergenic | 15.0% |
| !! | TTAATCTATTTATCCAAAAA+GGG | - | chr3.1:74100689-74100708 | None:intergenic | 15.0% |
| !! | TTTCTATATATAATAGCATA+TGG | - | chr3.1:74102902-74102921 | None:intergenic | 15.0% |
| !!! | AAAGAAATATTAGATTTTAC+AGG | - | chr3.1:74102339-74102358 | None:intergenic | 15.0% |
| !!! | CTTTTCTTTTTAACTTTTTT+TGG | + | chr3.1:74101544-74101563 | MS.gene06864:intron | 15.0% |
| !! | AAATATTACTACCTTTCTAA+TGG | - | chr3.1:74101145-74101164 | None:intergenic | 20.0% |
| !! | AATATTACTACCTTTCTAAT+GGG | - | chr3.1:74101144-74101163 | None:intergenic | 20.0% |
| !! | GAGATAAAATAAAGTCAAAT+TGG | + | chr3.1:74100743-74100762 | MS.gene06864:intron | 20.0% |
| !! | GATTAATTGAGCTTATTTAT+CGG | - | chr3.1:74100879-74100898 | None:intergenic | 20.0% |
| !! | GTTAATTTATCATTACTTCT+TGG | + | chr3.1:74101917-74101936 | MS.gene06864:CDS | 20.0% |
| !! | TGCTATTATATATAGAAACA+TGG | + | chr3.1:74102904-74102923 | MS.gene06864:CDS | 20.0% |
| !!! | ATTAATTTGTTTTTCCAAAC+AGG | - | chr3.1:74100520-74100539 | None:intergenic | 20.0% |
| !!! | TAATCATTTTACCTTGTATT+GGG | + | chr3.1:74100493-74100512 | MS.gene06864:intron | 20.0% |
| !!! | TATTTTCATAAGTTATCTTG+TGG | + | chr3.1:74100615-74100634 | MS.gene06864:intron | 20.0% |
| ! | AAGTTAAAAAGAAAAGGCAA+AGG | - | chr3.1:74101540-74101559 | None:intergenic | 25.0% |
| ! | AGTTGTAGAACAAAAAACAA+AGG | - | chr3.1:74101770-74101789 | None:intergenic | 25.0% |
| ! | ATATTACTACCTTTCTAATG+GGG | - | chr3.1:74101143-74101162 | None:intergenic | 25.0% |
| ! | ATCCAATCCAAATAGATATT+TGG | + | chr3.1:74100896-74100915 | MS.gene06864:intron | 25.0% |
| ! | CAAATACTATAGATTCGATA+AGG | - | chr3.1:74102078-74102097 | None:intergenic | 25.0% |
| ! | TAAAAAAGGAAGAATGTGAT+AGG | - | chr3.1:74102836-74102855 | None:intergenic | 25.0% |
| ! | TGTTACACCAAATATCTATT+TGG | - | chr3.1:74100906-74100925 | None:intergenic | 25.0% |
| ! | TTCAAATGTTGCTAAAGAAT+TGG | + | chr3.1:74101230-74101249 | MS.gene06864:intron | 25.0% |
| !! | AAGTTTAAATCCTTTTAGCA+TGG | + | chr3.1:74101307-74101326 | MS.gene06864:intron | 25.0% |
| !! | AGTTTAATCTTGTTATCTCA+AGG | + | chr3.1:74101280-74101299 | MS.gene06864:intron | 25.0% |
| !! | ATATAGAAACATGGCAATTT+TGG | + | chr3.1:74102913-74102932 | MS.gene06864:CDS | 25.0% |
| !! | CTAATCATTTTACCTTGTAT+TGG | + | chr3.1:74100492-74100511 | MS.gene06864:intron | 25.0% |
| !! | GTTTAATCTTGTTATCTCAA+GGG | + | chr3.1:74101281-74101300 | MS.gene06864:intron | 25.0% |
| !! | TATAGAAACATGGCAATTTT+GGG | + | chr3.1:74102914-74102933 | MS.gene06864:CDS | 25.0% |
| !! | TTTATCTCTTGCTATAGAAA+TGG | - | chr3.1:74100731-74100750 | None:intergenic | 25.0% |
| !! | TTTGTTCAATTTCCTACTTT+TGG | + | chr3.1:74101714-74101733 | MS.gene06864:CDS | 25.0% |
| !!! | ATTTGCTATAGTAGCTAATT+TGG | + | chr3.1:74102997-74103016 | MS.gene06864:CDS | 25.0% |
| !!! | CTAATAGCTAGTCTTATAAT+TGG | + | chr3.1:74100220-74100239 | MS.gene06864:CDS | 25.0% |
| AAATCCAGATGGTATTTACA+AGG | + | chr3.1:74102874-74102893 | MS.gene06864:CDS | 30.0% | |
| AACACCATTCAAGTCAAATT+GGG | - | chr3.1:74101382-74101401 | None:intergenic | 30.0% | |
| AATCATCATCACATTGAAGA+GGG | + | chr3.1:74100130-74100149 | MS.gene06864:CDS | 30.0% | |
| AGAAAACATTCCTATATGGT+TGG | + | chr3.1:74102430-74102449 | MS.gene06864:CDS | 30.0% | |
| AGGAAACAAATAACAGTTAG+AGG | + | chr3.1:74100196-74100215 | MS.gene06864:CDS | 30.0% | |
| CAAGAGAAAACATTCCTATA+TGG | + | chr3.1:74102426-74102445 | MS.gene06864:CDS | 30.0% | |
| CACCAAATATCTATTTGGAT+TGG | - | chr3.1:74100901-74100920 | None:intergenic | 30.0% | |
| CTAAGTTTAGCTAAAACTGA+AGG | - | chr3.1:74102054-74102073 | None:intergenic | 30.0% | |
| GATTTCAGTATGACTTATGT+TGG | + | chr3.1:74101869-74101888 | MS.gene06864:CDS | 30.0% | |
| GTGCAAAAATATACGCAAAA+AGG | - | chr3.1:74102538-74102557 | None:intergenic | 30.0% | |
| GTGCTTTAATCAGTAACAAT+TGG | - | chr3.1:74101826-74101845 | None:intergenic | 30.0% | |
| TACAAATTAACTTATCCCAG+TGG | + | chr3.1:74101444-74101463 | MS.gene06864:CDS | 30.0% | |
| TGAACTTGTGTGATAATTGT+AGG | + | chr3.1:74100958-74100977 | MS.gene06864:intron | 30.0% | |
| TGCTAAAGAATTGGTGTATA+AGG | + | chr3.1:74101239-74101258 | MS.gene06864:intron | 30.0% | |
| ! | CATCAAAAGCCTTGTAAAAA+AGG | - | chr3.1:74102850-74102869 | None:intergenic | 30.0% |
| ! | TATAATTTTTCCTGTCCTTG+AGG | + | chr3.1:74102265-74102284 | MS.gene06864:intron | 30.0% |
| ! | TTTTACAAGGCTTTTGATGT+TGG | + | chr3.1:74102851-74102870 | MS.gene06864:CDS | 30.0% |
| !! | AAGATCCTTCTTTTTCATGT+TGG | - | chr3.1:74102221-74102240 | None:intergenic | 30.0% |
| !! | GTTTTGGATCTTACTTATTG+GGG | + | chr3.1:74100983-74101002 | MS.gene06864:CDS | 30.0% |
| !!! | CACATTCTTCCTTTTTTACA+AGG | + | chr3.1:74102838-74102857 | MS.gene06864:CDS | 30.0% |
| !!! | GGTTTTGGATCTTACTTATT+GGG | + | chr3.1:74100982-74101001 | MS.gene06864:CDS | 30.0% |
| !!! | TGGTTTTGGATCTTACTTAT+TGG | + | chr3.1:74100981-74101000 | MS.gene06864:CDS | 30.0% |
| !!! | TTTTGTTGGACTTTTAGCTT+TGG | + | chr3.1:74101116-74101135 | MS.gene06864:CDS | 30.0% |
| AAATCCACAATTATCTCCAC+CGG | - | chr3.1:74101697-74101716 | None:intergenic | 35.0% | |
| AACCTTTAACAAAGCGAGAA+TGG | - | chr3.1:74103242-74103261 | None:intergenic | 35.0% | |
| AAGAAGCTCATACATATTGG+GGG | - | chr3.1:74103268-74103287 | None:intergenic | 35.0% | |
| AAGTAGCCACCAACTAAAAA+AGG | - | chr3.1:74103085-74103104 | None:intergenic | 35.0% | |
| ACACCATTCAAGTCAAATTG+GGG | - | chr3.1:74101381-74101400 | None:intergenic | 35.0% | |
| ACTTGTGTGATAATTGTAGG+TGG | + | chr3.1:74100961-74100980 | MS.gene06864:intron | 35.0% | |
| AGAATGTTCGGATTTGGATT+TGG | + | chr3.1:74103299-74103318 | MS.gene06864:CDS | 35.0% | |
| AGCTAAAAGTCCAACAAAAC+TGG | - | chr3.1:74101115-74101134 | None:intergenic | 35.0% | |
| AGTTGAATAGAATAGCACCA+TGG | + | chr3.1:74100173-74100192 | MS.gene06864:CDS | 35.0% | |
| ATCATGTGGCCTTTAATCAA+GGG | + | chr3.1:74101959-74101978 | MS.gene06864:CDS | 35.0% | |
| ATCTTGGCCCCAAAAAAATT+GGG | + | chr3.1:74103026-74103045 | MS.gene06864:CDS | 35.0% | |
| ATGAAACTCAATCTCACTAC+TGG | + | chr3.1:74100265-74100284 | MS.gene06864:CDS | 35.0% | |
| ATGAACATGGCCTATAACTA+CGG | + | chr3.1:74102602-74102621 | MS.gene06864:CDS | 35.0% | |
| ATGGCATATGCTGAACAAAA+AGG | + | chr3.1:74103144-74103163 | MS.gene06864:CDS | 35.0% | |
| ATTCAAGTCAAATTGGGGAA+GGG | - | chr3.1:74101376-74101395 | None:intergenic | 35.0% | |
| ATTTCCATTGCCTTGATTCT+TGG | + | chr3.1:74102139-74102158 | MS.gene06864:CDS | 35.0% | |
| CAACACCATTCAAGTCAAAT+TGG | - | chr3.1:74101383-74101402 | None:intergenic | 35.0% | |
| CAGCAGAAACATTGAGATTA+GGG | - | chr3.1:74100297-74100316 | None:intergenic | 35.0% | |
| CATTCTACAACCATGCTAAA+AGG | - | chr3.1:74101320-74101339 | None:intergenic | 35.0% | |
| CCTTTAATCAAGGGACTAAA+AGG | + | chr3.1:74101968-74101987 | MS.gene06864:CDS | 35.0% | |
| CTTACTTATTGGGGTTGAAT+AGG | + | chr3.1:74100992-74101011 | MS.gene06864:CDS | 35.0% | |
| CTTTCTTCTTCATTGCTTCT+AGG | - | chr3.1:74100100-74100119 | None:intergenic | 35.0% | |
| GAAGAAGCTCATACATATTG+GGG | - | chr3.1:74103269-74103288 | None:intergenic | 35.0% | |
| GAATCATCATCACATTGAAG+AGG | + | chr3.1:74100129-74100148 | MS.gene06864:CDS | 35.0% | |
| GAATCTGAATGAAATCCTCA+AGG | - | chr3.1:74102283-74102302 | None:intergenic | 35.0% | |
| GATTACAACGATTGAGATGA+TGG | - | chr3.1:74102480-74102499 | None:intergenic | 35.0% | |
| GCTAATTTGGTAAGAGATCT+TGG | + | chr3.1:74103010-74103029 | MS.gene06864:CDS | 35.0% | |
| GCTACTGCTGTTCTTATTAA+TGG | + | chr3.1:74101471-74101490 | MS.gene06864:CDS | 35.0% | |
| GGAAATAAAAACCTGTAGCA+AGG | - | chr3.1:74102125-74102144 | None:intergenic | 35.0% | |
| GGAAGAAGCTCATACATATT+GGG | - | chr3.1:74103270-74103289 | None:intergenic | 35.0% | |
| GTATTCTCTTGTCTAGTGAA+TGG | - | chr3.1:74100388-74100407 | None:intergenic | 35.0% | |
| GTTATAGGCCATGTTCATAT+CGG | - | chr3.1:74102600-74102619 | None:intergenic | 35.0% | |
| GTTTCGTGTTTATTCGAAGT+TGG | + | chr3.1:74100326-74100345 | MS.gene06864:CDS | 35.0% | |
| TACTGCACAAGTTTGAATGA+TGG | - | chr3.1:74100410-74100429 | None:intergenic | 35.0% | |
| TCAAATTGTATCCTTGCTAC+AGG | + | chr3.1:74102111-74102130 | MS.gene06864:intron | 35.0% | |
| TGGATTAACCGATATGAACA+TGG | + | chr3.1:74102589-74102608 | MS.gene06864:CDS | 35.0% | |
| TGGATTCGTGAAATTCTTCT+CGG | + | chr3.1:74101635-74101654 | MS.gene06864:CDS | 35.0% | |
| TTGATGCATGATTTGAAGAC+TGG | + | chr3.1:74102734-74102753 | MS.gene06864:CDS | 35.0% | |
| TTTGATGTTGGAAATCCAGA+TGG | + | chr3.1:74102863-74102882 | MS.gene06864:CDS | 35.0% | |
| TTTGCCATTGATATGTGTGT+AGG | + | chr3.1:74103103-74103122 | MS.gene06864:CDS | 35.0% | |
| ! | AATGGATTCCATACTCCTAA+AGG | + | chr3.1:74101489-74101508 | MS.gene06864:CDS | 35.0% |
| ! | ACATTGAATTGGACCCTTTT+TGG | + | chr3.1:74100673-74100692 | MS.gene06864:intron | 35.0% |
| ! | ACTGTTATTTGTTTCCTCCA+TGG | - | chr3.1:74100193-74100212 | None:intergenic | 35.0% |
| ! | ATCCATTCTCGCTTTGTTAA+AGG | + | chr3.1:74103237-74103256 | MS.gene06864:CDS | 35.0% |
| ! | CCTTTTAGTCCCTTGATTAA+AGG | - | chr3.1:74101971-74101990 | None:intergenic | 35.0% |
| ! | GTGATAATTGTAGGTGGTTT+TGG | + | chr3.1:74100967-74100986 | MS.gene06864:intron | 35.0% |
| ! | GTTGTAAAAGTTGTCGACTA+TGG | + | chr3.1:74101791-74101810 | MS.gene06864:intron | 35.0% |
| ! | TACTTTCTGGTATACTAGCA+GGG | - | chr3.1:74102003-74102022 | None:intergenic | 35.0% |
| !! | CTATTTGTGACCAGTTTTGT+TGG | + | chr3.1:74101102-74101121 | MS.gene06864:CDS | 35.0% |
| !!! | AACCCATCTCCCAATTTTTT+TGG | - | chr3.1:74103038-74103057 | None:intergenic | 35.0% |
| !!! | ACCCATCTCCCAATTTTTTT+GGG | - | chr3.1:74103037-74103056 | None:intergenic | 35.0% |
| AACAAAGCGAGAATGGATGA+AGG | - | chr3.1:74103235-74103254 | None:intergenic | 40.0% | |
| ACAAAATACCACTTCACCTG+AGG | - | chr3.1:74102515-74102534 | None:intergenic | 40.0% | |
| ACTAGTTCAACTTCTTTCCC+AGG | + | chr3.1:74101601-74101620 | MS.gene06864:intron | 40.0% | |
| ACTGCCTACACACATATCAA+TGG | - | chr3.1:74103110-74103129 | None:intergenic | 40.0% | |
| ACTTATTGGGGTTGAATAGG+AGG | + | chr3.1:74100995-74101014 | MS.gene06864:CDS | 40.0% | |
| AGTATGACTTATGTTGGAGC+AGG | + | chr3.1:74101875-74101894 | MS.gene06864:CDS | 40.0% | |
| ATCACCAAGAATCAAGGCAA+TGG | - | chr3.1:74102146-74102165 | None:intergenic | 40.0% | |
| ATCCGAACATTCTACCTAGA+TGG | - | chr3.1:74103292-74103311 | None:intergenic | 40.0% | |
| ATGCTGAACAAAAAGGAAGC+TGG | + | chr3.1:74103151-74103170 | MS.gene06864:CDS | 40.0% | |
| ATGCTTGTAAGCCAAGCAAT+TGG | + | chr3.1:74102785-74102804 | MS.gene06864:CDS | 40.0% | |
| ATTGCCTTGATTCTTGGTGA+TGG | + | chr3.1:74102145-74102164 | MS.gene06864:CDS | 40.0% | |
| ATTTCCATAAGCTCACTCTC+TGG | - | chr3.1:74100805-74100824 | None:intergenic | 40.0% | |
| CAAAATACCACTTCACCTGA+GGG | - | chr3.1:74102514-74102533 | None:intergenic | 40.0% | |
| CAAGCAATTGGAACAGCAAT+AGG | + | chr3.1:74102797-74102816 | MS.gene06864:CDS | 40.0% | |
| CACAATTGCAAGCAATGATC+TGG | - | chr3.1:74102962-74102981 | None:intergenic | 40.0% | |
| CATCATGTGGCCTTTAATCA+AGG | + | chr3.1:74101958-74101977 | MS.gene06864:CDS | 40.0% | |
| CATGCTTGCAATCCAAAAGT+AGG | - | chr3.1:74101729-74101748 | None:intergenic | 40.0% | |
| CATGTTGGCATGGATATTTG+TGG | - | chr3.1:74102206-74102225 | None:intergenic | 40.0% | |
| CATTCAAGTCAAATTGGGGA+AGG | - | chr3.1:74101377-74101396 | None:intergenic | 40.0% | |
| CATTGCTTGCAATTGTGTTG+TGG | + | chr3.1:74102965-74102984 | MS.gene06864:CDS | 40.0% | |
| CCATGCCAACATGAAAAAGA+AGG | + | chr3.1:74102213-74102232 | MS.gene06864:CDS | 40.0% | |
| CCCCAAAAAAATTGGGAGAT+GGG | + | chr3.1:74103033-74103052 | MS.gene06864:CDS | 40.0% | |
| CTAGGTAGAATGTTCGGATT+TGG | + | chr3.1:74103293-74103312 | MS.gene06864:intron | 40.0% | |
| CTATATGGTTGGCATGTACA+GGG | + | chr3.1:74102441-74102460 | MS.gene06864:CDS | 40.0% | |
| GAGGAGTCTCAATGGTTATA+AGG | + | chr3.1:74102027-74102046 | MS.gene06864:CDS | 40.0% | |
| GATCTTGGCCCCAAAAAAAT+TGG | + | chr3.1:74103025-74103044 | MS.gene06864:CDS | 40.0% | |
| GCAGCAGAAACATTGAGATT+AGG | - | chr3.1:74100298-74100317 | None:intergenic | 40.0% | |
| GCAGCTTACAGACATTGAAT+TGG | + | chr3.1:74100662-74100681 | MS.gene06864:intron | 40.0% | |
| GCAGTTTGATTGTGTTTGCA+TGG | + | chr3.1:74103125-74103144 | MS.gene06864:CDS | 40.0% | |
| GGGAAGAAGCTCATACATAT+TGG | - | chr3.1:74103271-74103290 | None:intergenic | 40.0% | |
| GTATACCAGAAAGTAGCATG+AGG | + | chr3.1:74102008-74102027 | MS.gene06864:CDS | 40.0% | |
| TACTCCTAAAGGAGATGTGA+TGG | + | chr3.1:74101500-74101519 | MS.gene06864:CDS | 40.0% | |
| TCAAGGGACTAAAAGGAGAA+TGG | + | chr3.1:74101975-74101994 | MS.gene06864:CDS | 40.0% | |
| TCCCATCTAGGTAGAATGTT+CGG | + | chr3.1:74103287-74103306 | MS.gene06864:intron | 40.0% | |
| TCCGAACATTCTACCTAGAT+GGG | - | chr3.1:74103291-74103310 | None:intergenic | 40.0% | |
| TGAACATGGCCTATAACTAC+GGG | + | chr3.1:74102603-74102622 | MS.gene06864:CDS | 40.0% | |
| TGAATAGAATAGCACCATGG+AGG | + | chr3.1:74100176-74100195 | MS.gene06864:CDS | 40.0% | |
| TGAATGAAATCCTCAAGGAC+AGG | - | chr3.1:74102278-74102297 | None:intergenic | 40.0% | |
| TTCTTTCAGTGGTTCTTCAC+CGG | + | chr3.1:74101675-74101694 | MS.gene06864:CDS | 40.0% | |
| TTGTTTGGGCATTCTTTCAG+TGG | + | chr3.1:74101664-74101683 | MS.gene06864:CDS | 40.0% | |
| TTTCCATAAGCTCACTCTCT+GGG | - | chr3.1:74100804-74100823 | None:intergenic | 40.0% | |
| ! | AAAAGTGATGGTGTAGTTGC+TGG | + | chr3.1:74102662-74102681 | MS.gene06864:CDS | 40.0% |
| ! | AATGTTTCTGCTGCTCTACT+TGG | + | chr3.1:74100304-74100323 | MS.gene06864:CDS | 40.0% |
| ! | AGCTACTTTCCCGTAGTTAT+AGG | - | chr3.1:74102615-74102634 | None:intergenic | 40.0% |
| ! | AGGCAAAGGAAGTACATACT+TGG | - | chr3.1:74101526-74101545 | None:intergenic | 40.0% |
| ! | CTACTTTCTGGTATACTAGC+AGG | - | chr3.1:74102004-74102023 | None:intergenic | 40.0% |
| ! | CTATTGCTGTTCCAATTGCT+TGG | - | chr3.1:74102799-74102818 | None:intergenic | 40.0% |
| ! | TCACATCTCCTTTAGGAGTA+TGG | - | chr3.1:74101500-74101519 | None:intergenic | 40.0% |
| ! | TTGCCTTGATTCTTGGTGAT+GGG | + | chr3.1:74102146-74102165 | MS.gene06864:CDS | 40.0% |
| ! | TTTCGTCTGAGATCATCAAG+AGG | - | chr3.1:74102395-74102414 | None:intergenic | 40.0% |
| !! | AAACATGGCAATTTTGGGTG+TGG | + | chr3.1:74102919-74102938 | MS.gene06864:CDS | 40.0% |
| !! | ATCATTACTTCTTGGTGCTG+TGG | + | chr3.1:74101925-74101944 | MS.gene06864:CDS | 40.0% |
| !! | CCTTCTTTTTCATGTTGGCA+TGG | - | chr3.1:74102216-74102235 | None:intergenic | 40.0% |
| !! | CTACTTTTGGATTGCAAGCA+TGG | + | chr3.1:74101727-74101746 | MS.gene06864:CDS | 40.0% |
| !! | CTTCCCCAATTTGACTTGAA+TGG | + | chr3.1:74101375-74101394 | MS.gene06864:intron | 40.0% |
| !! | GTTGCTTCTGGTTTGATTTG+TGG | + | chr3.1:74103190-74103209 | MS.gene06864:CDS | 40.0% |
| !! | TATATTTTTGCACCCTCGCT+CGG | + | chr3.1:74102545-74102564 | MS.gene06864:CDS | 40.0% |
| !! | TCATTGCTTCTAGGATCCAT+TGG | - | chr3.1:74100091-74100110 | None:intergenic | 40.0% |
| !! | TCTGGTTTGATTTGTGGAGA+TGG | + | chr3.1:74103196-74103215 | MS.gene06864:CDS | 40.0% |
| !! | TGATTTGTGGAGATGGATTG+TGG | + | chr3.1:74103203-74103222 | MS.gene06864:CDS | 40.0% |
| !!! | ACCATCACTTTTTCCAGCTA+AGG | - | chr3.1:74102654-74102673 | None:intergenic | 40.0% |
| !!! | ATCACTTTTTCCAGCTAAGG+CGG | - | chr3.1:74102651-74102670 | None:intergenic | 40.0% |
| !!! | ATGGCTGTGCCTTTTTTAGT+TGG | + | chr3.1:74103073-74103092 | MS.gene06864:CDS | 40.0% |
| !!! | CCCATCTCCCAATTTTTTTG+GGG | - | chr3.1:74103036-74103055 | None:intergenic | 40.0% |
| !!! | CTTCTCGGCAAGTTTTGTTT+GGG | + | chr3.1:74101650-74101669 | MS.gene06864:CDS | 40.0% |
| !!! | TCTTCTCGGCAAGTTTTGTT+TGG | + | chr3.1:74101649-74101668 | MS.gene06864:CDS | 40.0% |
| AAGCACTTGTGAGGCTGTTT+GGG | - | chr3.1:74100853-74100872 | None:intergenic | 45.0% | |
| AAGCAGGGATTGATACACCA+GGG | + | chr3.1:74101028-74101047 | MS.gene06864:CDS | 45.0% | |
| AAGCCCATCACCAAGAATCA+AGG | - | chr3.1:74102152-74102171 | None:intergenic | 45.0% | |
| AATCCATGAACCTGCTTCCT+GGG | - | chr3.1:74101621-74101640 | None:intergenic | 45.0% | |
| AATCCCATTGATGTTCCCTC+AGG | + | chr3.1:74102496-74102515 | MS.gene06864:CDS | 45.0% | |
| ACCTTGTATTGGGTCCTGTT+TGG | + | chr3.1:74100503-74100522 | MS.gene06864:intron | 45.0% | |
| AGTAGCATGAGGAGTCTCAA+TGG | + | chr3.1:74102019-74102038 | MS.gene06864:CDS | 45.0% | |
| ATCAAACCAGAAGCAACTGC+AGG | - | chr3.1:74103187-74103206 | None:intergenic | 45.0% | |
| ATGATTCCTGCAGTTGCTTC+TGG | + | chr3.1:74103178-74103197 | MS.gene06864:CDS | 45.0% | |
| CCTATATGGTTGGCATGTAC+AGG | + | chr3.1:74102440-74102459 | MS.gene06864:CDS | 45.0% | |
| CCTGTACATGCCAACCATAT+AGG | - | chr3.1:74102443-74102462 | None:intergenic | 45.0% | |
| CTGAGATCATCAAGAGGCAA+CGG | - | chr3.1:74102389-74102408 | None:intergenic | 45.0% | |
| GAATACTCCTGGTAGTACCA+AGG | + | chr3.1:74101050-74101069 | MS.gene06864:CDS | 45.0% | |
| GCCCCAAAAAAATTGGGAGA+TGG | + | chr3.1:74103032-74103051 | MS.gene06864:CDS | 45.0% | |
| GCCTTAGCTGGAAAAAGTGA+TGG | + | chr3.1:74102650-74102669 | MS.gene06864:CDS | 45.0% | |
| GGAGGAATCTGTGAATCCAA+TGG | + | chr3.1:74100072-74100091 | MS.gene06864:CDS | 45.0% | |
| GTATGAGCTTCTTCCCATCT+AGG | + | chr3.1:74103275-74103294 | MS.gene06864:intron | 45.0% | |
| GTGTAGTTGCTGGACTTGTA+GGG | + | chr3.1:74102672-74102691 | MS.gene06864:CDS | 45.0% | |
| TAAGCACTTGTGAGGCTGTT+TGG | - | chr3.1:74100854-74100873 | None:intergenic | 45.0% | |
| TATCCCAGAGAGTGAGCTTA+TGG | + | chr3.1:74100798-74100817 | MS.gene06864:intron | 45.0% | |
| TATCGGCATAAGCACTTGTG+AGG | - | chr3.1:74100862-74100881 | None:intergenic | 45.0% | |
| TCACATTGAAGAGGGTCAAG+TGG | + | chr3.1:74100138-74100157 | MS.gene06864:CDS | 45.0% | |
| TCACCTGAGGGAACATCAAT+GGG | - | chr3.1:74102502-74102521 | None:intergenic | 45.0% | |
| TCCAAACAGGACCCAATACA+AGG | - | chr3.1:74100507-74100526 | None:intergenic | 45.0% | |
| TTCACCGGTGGAGATAATTG+TGG | + | chr3.1:74101690-74101709 | MS.gene06864:CDS | 45.0% | |
| TTCACCTGAGGGAACATCAA+TGG | - | chr3.1:74102503-74102522 | None:intergenic | 45.0% | |
| TTCTGCAATGCTTATGGTGC+TGG | + | chr3.1:74102569-74102588 | MS.gene06864:CDS | 45.0% | |
| TTGGCCATCACATCTCCTTT+AGG | - | chr3.1:74101507-74101526 | None:intergenic | 45.0% | |
| ! | AGCTTTGGTCCCCATTAGAA+AGG | + | chr3.1:74101131-74101150 | MS.gene06864:CDS | 45.0% |
| ! | GATTGGTTCAATCACAGTGG+AGG | + | chr3.1:74100054-74100073 | MS.gene06864:CDS | 45.0% |
| ! | GGAGCCTTGTAAATACCATC+TGG | - | chr3.1:74102881-74102900 | None:intergenic | 45.0% |
| !! | AGACTCCTCATGCTACTTTC+TGG | - | chr3.1:74102016-74102035 | None:intergenic | 45.0% |
| !! | ATGGCAATTTTGGGTGTGGA+AGG | + | chr3.1:74102923-74102942 | MS.gene06864:CDS | 45.0% |
| !! | TCTTGGTGCTGTGGTTTCTT+GGG | + | chr3.1:74101934-74101953 | MS.gene06864:CDS | 45.0% |
| !! | TTCTTGGTGCTGTGGTTTCT+TGG | + | chr3.1:74101933-74101952 | MS.gene06864:CDS | 45.0% |
| !!! | GCTGTGCCTTTTTTAGTTGG+TGG | + | chr3.1:74103076-74103095 | MS.gene06864:CDS | 45.0% |
| !!! | TTTAATTTAATGAATTTTTT+AGG | + | chr3.1:74101571-74101590 | MS.gene06864:intron | 5.0% |
| AACAGCAGTAGCAGTTCCAC+TGG | - | chr3.1:74101463-74101482 | None:intergenic | 50.0% | |
| ACAGCAGTAGCAGTTCCACT+GGG | - | chr3.1:74101462-74101481 | None:intergenic | 50.0% | |
| ACAGCCATAGCCATTGGAAG+TGG | - | chr3.1:74103061-74103080 | None:intergenic | 50.0% | |
| AGGAGGACTTATGAGCAAGC+AGG | + | chr3.1:74101012-74101031 | MS.gene06864:CDS | 50.0% | |
| AGTACCAAGGAGCCTGCAAT+TGG | + | chr3.1:74101063-74101082 | MS.gene06864:CDS | 50.0% | |
| CAACTTCTTTCCCAGGAAGC+AGG | + | chr3.1:74101608-74101627 | MS.gene06864:intron | 50.0% | |
| CAAGCAGGGATTGATACACC+AGG | + | chr3.1:74101027-74101046 | MS.gene06864:CDS | 50.0% | |
| CATCAAGAGGCAACGGTTTC+TGG | - | chr3.1:74102382-74102401 | None:intergenic | 50.0% | |
| CTCGGCTTCTGCAATGCTTA+TGG | + | chr3.1:74102563-74102582 | MS.gene06864:CDS | 50.0% | |
| GAATCCATGAACCTGCTTCC+TGG | - | chr3.1:74101622-74101641 | None:intergenic | 50.0% | |
| GATACACCAGGGAATACTCC+TGG | + | chr3.1:74101039-74101058 | MS.gene06864:CDS | 50.0% | |
| GCTGTCATCCAACCAATTGC+AGG | - | chr3.1:74101078-74101097 | None:intergenic | 50.0% | |
| GGAGGACTTATGAGCAAGCA+GGG | + | chr3.1:74101013-74101032 | MS.gene06864:CDS | 50.0% | |
| GGTGTAGTTGCTGGACTTGT+AGG | + | chr3.1:74102671-74102690 | MS.gene06864:CDS | 50.0% | |
| GGTTCCACTTCCAATGGCTA+TGG | + | chr3.1:74103054-74103073 | MS.gene06864:CDS | 50.0% | |
| TGAAGAGGGTCAAGTGGCTT+TGG | + | chr3.1:74100144-74100163 | MS.gene06864:CDS | 50.0% | |
| TGATGTTCCCTCAGGTGAAG+TGG | + | chr3.1:74102504-74102523 | MS.gene06864:CDS | 50.0% | |
| TGCTATAGCATCGCTGTAGG+AGG | + | chr3.1:74100433-74100452 | MS.gene06864:CDS | 50.0% | |
| TTTCAGTGGTTCTTCACCGG+TGG | + | chr3.1:74101678-74101697 | MS.gene06864:CDS | 50.0% | |
| TTTCCCAGGAAGCAGGTTCA+TGG | + | chr3.1:74101615-74101634 | MS.gene06864:intron | 50.0% | |
| ! | AAAGGCACAGCCATAGCCAT+TGG | - | chr3.1:74103067-74103086 | None:intergenic | 50.0% |
| ! | GAGATGGGTTCCACTTCCAA+TGG | + | chr3.1:74103048-74103067 | MS.gene06864:CDS | 50.0% |
| ! | TGGTTTCTTGGGGCATCATG+TGG | + | chr3.1:74101945-74101964 | MS.gene06864:CDS | 50.0% |
| !! | AGGCAACGGTTTCTGGTTAC+TGG | - | chr3.1:74102375-74102394 | None:intergenic | 50.0% |
| !! | CTTGGTGCTGTGGTTTCTTG+GGG | + | chr3.1:74101935-74101954 | MS.gene06864:CDS | 50.0% |
| !! | GCTTGCTATAGCATCGCTGT+AGG | + | chr3.1:74100430-74100449 | MS.gene06864:CDS | 50.0% |
| !! | GTACTACCAGGAGTATTCCC+TGG | - | chr3.1:74101048-74101067 | None:intergenic | 50.0% |
| !! | TGGCTTACAAGCATCGAACG+TGG | - | chr3.1:74102779-74102798 | None:intergenic | 50.0% |
| CCAACCAATTGCAGGCTCCT+TGG | - | chr3.1:74101070-74101089 | None:intergenic | 55.0% | |
| CCAAGGAGCCTGCAATTGGT+TGG | + | chr3.1:74101067-74101086 | MS.gene06864:CDS | 55.0% | |
| GTGGCGAAGTCAGAGTGAGA+TGG | - | chr3.1:74102760-74102779 | None:intergenic | 55.0% | |
| GTTGCTGGACTTGTAGGGTG+TGG | + | chr3.1:74102677-74102696 | MS.gene06864:CDS | 55.0% | |
| TTTGTGCTTGCCGCCTTAGC+TGG | + | chr3.1:74102638-74102657 | MS.gene06864:CDS | 55.0% | |
| AGCATTGCAGAAGCCGAGCG+AGG | - | chr3.1:74102561-74102580 | None:intergenic | 60.0% | |
| GCAGGCTCCTTGGTACTACC+AGG | - | chr3.1:74101060-74101079 | None:intergenic | 60.0% | |
| GCATTGCAGAAGCCGAGCGA+GGG | - | chr3.1:74102560-74102579 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 74100052 | 74103329 | 74100052 | ID=MS.gene06864 |
| chr3.1 | mRNA | 74100052 | 74103329 | 74100052 | ID=MS.gene06864.t1;Parent=MS.gene06864 |
| chr3.1 | exon | 74100052 | 74100454 | 74100052 | ID=MS.gene06864.t1.exon1;Parent=MS.gene06864.t1 |
| chr3.1 | CDS | 74100052 | 74100454 | 74100052 | ID=cds.MS.gene06864.t1;Parent=MS.gene06864.t1 |
| chr3.1 | exon | 74100980 | 74101152 | 74100980 | ID=MS.gene06864.t1.exon2;Parent=MS.gene06864.t1 |
| chr3.1 | CDS | 74100980 | 74101152 | 74100980 | ID=cds.MS.gene06864.t1;Parent=MS.gene06864.t1 |
| chr3.1 | exon | 74101429 | 74101526 | 74101429 | ID=MS.gene06864.t1.exon3;Parent=MS.gene06864.t1 |
| chr3.1 | CDS | 74101429 | 74101526 | 74101429 | ID=cds.MS.gene06864.t1;Parent=MS.gene06864.t1 |
| chr3.1 | exon | 74101623 | 74101757 | 74101623 | ID=MS.gene06864.t1.exon4;Parent=MS.gene06864.t1 |
| chr3.1 | CDS | 74101623 | 74101757 | 74101623 | ID=cds.MS.gene06864.t1;Parent=MS.gene06864.t1 |
| chr3.1 | exon | 74101859 | 74102048 | 74101859 | ID=MS.gene06864.t1.exon5;Parent=MS.gene06864.t1 |
| chr3.1 | CDS | 74101859 | 74102048 | 74101859 | ID=cds.MS.gene06864.t1;Parent=MS.gene06864.t1 |
| chr3.1 | exon | 74102133 | 74102247 | 74102133 | ID=MS.gene06864.t1.exon6;Parent=MS.gene06864.t1 |
| chr3.1 | CDS | 74102133 | 74102247 | 74102133 | ID=cds.MS.gene06864.t1;Parent=MS.gene06864.t1 |
| chr3.1 | exon | 74102369 | 74103258 | 74102369 | ID=MS.gene06864.t1.exon7;Parent=MS.gene06864.t1 |
| chr3.1 | CDS | 74102369 | 74103258 | 74102369 | ID=cds.MS.gene06864.t1;Parent=MS.gene06864.t1 |
| chr3.1 | exon | 74103297 | 74103329 | 74103297 | ID=MS.gene06864.t1.exon8;Parent=MS.gene06864.t1 |
| chr3.1 | CDS | 74103297 | 74103329 | 74103297 | ID=cds.MS.gene06864.t1;Parent=MS.gene06864.t1 |
| Gene Sequence |
| Protein sequence |
