Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004968.t1 | XP_013468866.1 | 99 | 680 | 7 | 0 | 1 | 680 | 1 | 680 | 0.00E+00 | 1355.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004968.t1 | Q6R3L0 | 73.1 | 636 | 168 | 1 | 45 | 680 | 41 | 673 | 2.4e-284 | 979.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004968.t1 | A0A072VND8 | 99.0 | 680 | 7 | 0 | 1 | 680 | 1 | 680 | 0.0e+00 | 1355.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013539 | MS.gene004968 | PPI |
| MS.gene052792 | MS.gene004968 | PPI |
| MS.gene33454 | MS.gene004968 | PPI |
| MS.gene004968 | MS.gene06650 | PPI |
| MS.gene004968 | MS.gene99504 | PPI |
| MS.gene071032 | MS.gene004968 | PPI |
| MS.gene93375 | MS.gene004968 | PPI |
| MS.gene004968 | MS.gene06864 | PPI |
| MS.gene95674 | MS.gene004968 | PPI |
| MS.gene33707 | MS.gene004968 | PPI |
| MS.gene057201 | MS.gene004968 | PPI |
| MS.gene069003 | MS.gene004968 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004968.t1 | MTR_1g077840 | 98.971 | 680 | 7 | 0 | 1 | 680 | 1 | 680 | 0.0 | 1384 |
| MS.gene004968.t1 | MTR_3g092090 | 64.812 | 665 | 231 | 2 | 17 | 680 | 4 | 666 | 0.0 | 919 |
| MS.gene004968.t1 | MTR_3g092090 | 64.931 | 653 | 226 | 2 | 17 | 668 | 4 | 654 | 0.0 | 902 |
| MS.gene004968.t1 | MTR_1g007580 | 62.704 | 673 | 242 | 5 | 11 | 680 | 6 | 672 | 0.0 | 875 |
| MS.gene004968.t1 | MTR_0312s0020 | 62.085 | 662 | 246 | 4 | 23 | 680 | 12 | 672 | 0.0 | 866 |
| MS.gene004968.t1 | MTR_1g007540 | 62.085 | 662 | 246 | 4 | 23 | 680 | 12 | 672 | 0.0 | 866 |
| MS.gene004968.t1 | MTR_7g028250 | 53.365 | 639 | 289 | 5 | 46 | 677 | 37 | 673 | 0.0 | 727 |
| MS.gene004968.t1 | MTR_6g077870 | 51.638 | 641 | 295 | 7 | 47 | 679 | 66 | 699 | 0.0 | 712 |
| MS.gene004968.t1 | MTR_5g091600 | 51.274 | 667 | 312 | 7 | 22 | 679 | 7 | 669 | 0.0 | 704 |
| MS.gene004968.t1 | MTR_3g063490 | 53.052 | 639 | 291 | 5 | 47 | 679 | 48 | 683 | 0.0 | 697 |
| MS.gene004968.t1 | MTR_3g063520 | 52.426 | 639 | 295 | 5 | 47 | 679 | 42 | 677 | 0.0 | 672 |
| MS.gene004968.t1 | MTR_6g077870 | 51.215 | 535 | 252 | 6 | 153 | 679 | 5 | 538 | 0.0 | 596 |
| MS.gene004968.t1 | MTR_1626s0010 | 61.277 | 235 | 91 | 0 | 224 | 458 | 1 | 235 | 1.46e-102 | 313 |
| MS.gene004968.t1 | MTR_5g091615 | 56.291 | 151 | 65 | 1 | 530 | 679 | 59 | 209 | 1.06e-50 | 178 |
| MS.gene004968.t1 | MTR_0312s0050 | 74.699 | 83 | 21 | 0 | 47 | 129 | 38 | 120 | 1.47e-38 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004968.t1 | AT4G24120 | 70.615 | 667 | 191 | 2 | 16 | 680 | 10 | 673 | 0.0 | 998 |
| MS.gene004968.t1 | AT5G53550 | 64.468 | 667 | 231 | 4 | 16 | 680 | 9 | 671 | 0.0 | 909 |
| MS.gene004968.t1 | AT5G53550 | 64.468 | 667 | 231 | 4 | 16 | 680 | 9 | 671 | 0.0 | 909 |
| MS.gene004968.t1 | AT5G53550 | 64.468 | 667 | 231 | 4 | 16 | 680 | 9 | 671 | 0.0 | 909 |
| MS.gene004968.t1 | AT5G53550 | 64.468 | 667 | 231 | 4 | 16 | 680 | 9 | 671 | 0.0 | 909 |
| MS.gene004968.t1 | AT5G53550 | 64.468 | 667 | 231 | 4 | 16 | 680 | 9 | 671 | 0.0 | 909 |
| MS.gene004968.t1 | AT5G24380 | 63.664 | 666 | 230 | 4 | 20 | 680 | 5 | 663 | 0.0 | 902 |
| MS.gene004968.t1 | AT1G65730 | 52.500 | 680 | 298 | 9 | 19 | 679 | 1 | 674 | 0.0 | 734 |
| MS.gene004968.t1 | AT3G27020 | 51.194 | 670 | 312 | 6 | 20 | 677 | 4 | 670 | 0.0 | 721 |
| MS.gene004968.t1 | AT5G41000 | 51.791 | 670 | 315 | 4 | 18 | 680 | 2 | 670 | 0.0 | 721 |
| MS.gene004968.t1 | AT5G53550 | 64.775 | 511 | 177 | 2 | 171 | 680 | 1 | 509 | 0.0 | 713 |
| MS.gene004968.t1 | AT1G48370 | 52.207 | 657 | 293 | 7 | 40 | 680 | 59 | 710 | 0.0 | 687 |
| MS.gene004968.t1 | AT5G41000 | 50.526 | 665 | 306 | 4 | 18 | 680 | 2 | 645 | 0.0 | 682 |
| MS.gene004968.t1 | AT3G17650 | 50.533 | 657 | 305 | 7 | 39 | 680 | 49 | 700 | 0.0 | 677 |
| MS.gene004968.t1 | AT3G17650 | 50.533 | 657 | 305 | 7 | 39 | 680 | 49 | 700 | 0.0 | 677 |
| MS.gene004968.t1 | AT1G48370 | 52.319 | 539 | 243 | 5 | 156 | 680 | 9 | 547 | 0.0 | 571 |
| MS.gene004968.t1 | AT5G41000 | 51.515 | 495 | 232 | 4 | 193 | 680 | 1 | 494 | 0.0 | 534 |
| MS.gene004968.t1 | AT5G45450 | 48.077 | 208 | 101 | 2 | 474 | 680 | 1 | 202 | 6.68e-65 | 214 |
Find 154 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCATGGCCGTACCGTTTC+TGG | 0.148320 | 1.4:+63759025 | MS.gene004968:CDS |
| CTCGCATTCTGCAATGCTTT+TGG | 0.175738 | 1.4:+63758519 | MS.gene004968:CDS |
| CATTGCTTGCAACTTTGTTT+TGG | 0.185014 | 1.4:+63758921 | MS.gene004968:CDS |
| AGAATGTTTGAGCTTGTTTA+AGG | 0.190142 | 1.4:-63758359 | None:intergenic |
| ATGGTTCCAGCAATTGCTTC+TGG | 0.222492 | 1.4:+63759134 | MS.gene004968:CDS |
| AACCATCAACTCTGCTTTCT+TGG | 0.226520 | 1.4:-63759117 | None:intergenic |
| CTTGGAGCTGTGCTCTCTTA+TGG | 0.235520 | 1.4:+63757977 | MS.gene004968:CDS |
| CAAGAGCAAGAACCATAAAA+AGG | 0.240574 | 1.4:+63758183 | MS.gene004968:CDS |
| CTAAACATCAACATGGAATT+TGG | 0.250698 | 1.4:+63756449 | MS.gene004968:CDS |
| GCAGCAGAGACATTCAAATT+TGG | 0.267639 | 1.4:-63756668 | None:intergenic |
| TTGATCGGCGTAAAGGAAAT+TGG | 0.270852 | 1.4:+63758017 | MS.gene004968:CDS |
| GAAGGGTTTATATGGTTATA+AGG | 0.272710 | 1.4:+63758069 | MS.gene004968:CDS |
| AATTCCATGTTGATGTTTAG+TGG | 0.299995 | 1.4:-63756446 | None:intergenic |
| ACTAACATGAAGGGTTTATA+TGG | 0.306840 | 1.4:+63758061 | MS.gene004968:CDS |
| ACAGAAACATGGCAGTTATA+GGG | 0.308924 | 1.4:+63758871 | MS.gene004968:CDS |
| TCACACACAGGATGATAAAA+TGG | 0.314433 | 1.4:+63757536 | MS.gene004968:CDS |
| CCTGCATTTGGTTGGATGTC+TGG | 0.315025 | 1.4:+63757209 | MS.gene004968:CDS |
| TTTGAACAGTTTCCAACCTT+TGG | 0.315680 | 1.4:+63757757 | MS.gene004968:CDS |
| CTGTCCAATGTTCATCAGAT+TGG | 0.320759 | 1.4:-63756550 | None:intergenic |
| ATTATTTCAGCTCCTATAAC+TGG | 0.321331 | 1.4:-63756527 | None:intergenic |
| TACAGAAACATGGCAGTTAT+AGG | 0.321915 | 1.4:+63758870 | MS.gene004968:CDS |
| CAACAAAGCAAACAACAAAA+AGG | 0.327369 | 1.4:-63757235 | None:intergenic |
| CTCCAAGAAAGCAGAGTTGA+TGG | 0.329189 | 1.4:+63759115 | MS.gene004968:CDS |
| CAACCTTTGGATTGCAAGCT+TGG | 0.329374 | 1.4:+63757770 | MS.gene004968:CDS |
| ATTATATGCCATGTTTATAT+CGG | 0.361843 | 1.4:-63758553 | None:intergenic |
| ATAAACATGGCATATAATTA+CGG | 0.369510 | 1.4:+63758558 | MS.gene004968:CDS |
| GAGGAAAGGTTGCCAGTTAT+AGG | 0.369530 | 1.4:+63756515 | MS.gene004968:CDS |
| TTTCTGTAAATTAGCGCATA+AGG | 0.374435 | 1.4:-63758855 | None:intergenic |
| GGTGTAGTGGCAGCACTTGT+TGG | 0.376653 | 1.4:+63758627 | MS.gene004968:CDS |
| TGGATCGGGGTGGTTGGATA+TGG | 0.377446 | 1.4:+63758402 | MS.gene004968:CDS |
| TTGGAACCATTCCTGTTGTA+AGG | 0.381075 | 1.4:-63756649 | None:intergenic |
| CATCAAATGCCTTGTAGAAC+AGG | 0.386991 | 1.4:-63758803 | None:intergenic |
| GGATTTGCTTCTTACCTGTT+GGG | 0.389382 | 1.4:+63757116 | MS.gene004968:CDS |
| TTGCTTCTGGACTAATTTGC+GGG | 0.390184 | 1.4:+63759147 | MS.gene004968:CDS |
| GTGAACTTGTCTCTGCTCCT+TGG | 0.393687 | 1.4:+63757959 | MS.gene004968:CDS |
| CTATCAATTGCTCTAATCCT+TGG | 0.398456 | 1.4:+63758097 | MS.gene004968:CDS |
| TCTTATGGGGTTTCTTTAAG+TGG | 0.406690 | 1.4:+63757707 | MS.gene004968:CDS |
| GCAACAGCGGTTCTCATCAA+TGG | 0.408070 | 1.4:+63757510 | MS.gene004968:CDS |
| TGATATGTGCACGGGTAGTT+TGG | 0.409592 | 1.4:+63759067 | MS.gene004968:CDS |
| AGAGCATTCCAATGTGGATC+GGG | 0.410494 | 1.4:+63758388 | MS.gene004968:CDS |
| TGCTATAGCATTGCTGTTAG+CGG | 0.415612 | 1.4:+63756806 | MS.gene004968:CDS |
| ACAAGCTCAAACATTCTTGA+AGG | 0.418237 | 1.4:+63758365 | MS.gene004968:CDS |
| TAAACATGGCATATAATTAC+GGG | 0.419343 | 1.4:+63758559 | MS.gene004968:CDS |
| TTGATGTTTAGTGGACTTGA+TGG | 0.419351 | 1.4:-63756437 | None:intergenic |
| ACATGTTTCCTCAGCTGAAA+TGG | 0.420348 | 1.4:+63758460 | MS.gene004968:CDS |
| GCAGTTAAAGAACCTGCATT+TGG | 0.420611 | 1.4:+63757197 | MS.gene004968:CDS |
| CTTACCTGTTGGGATTAAAC+AGG | 0.421340 | 1.4:+63757126 | MS.gene004968:CDS |
| TTCTGTAAATTAGCGCATAA+GGG | 0.423993 | 1.4:-63758854 | None:intergenic |
| CAGGTTCTTTAACTGCGCTT+GGG | 0.424884 | 1.4:-63757190 | None:intergenic |
| GCAGGTTCTTTAACTGCGCT+TGG | 0.426747 | 1.4:-63757191 | None:intergenic |
| AGGATTTGCTTCTTACCTGT+TGG | 0.428296 | 1.4:+63757115 | MS.gene004968:CDS |
| AACAGCACAAGTCTGAATAA+TGG | 0.434716 | 1.4:-63756780 | None:intergenic |
| GACAGTTGAAACTAGAATCT+TGG | 0.437254 | 1.4:-63758140 | None:intergenic |
| TCTTCCTGTTTAATCCCAAC+AGG | 0.440272 | 1.4:-63757130 | None:intergenic |
| GCTTGTTTAAGGTCACCATT+TGG | 0.442681 | 1.4:-63758348 | None:intergenic |
| ATGGCAGTTATAGGGGTTCA+AGG | 0.442747 | 1.4:+63758879 | MS.gene004968:CDS |
| CAAGTAGTTGGCACTGCAAT+GGG | 0.442885 | 1.4:+63758753 | MS.gene004968:CDS |
| GGCCGTACCGTTTCTGGTAG+GGG | 0.452239 | 1.4:+63759031 | MS.gene004968:CDS |
| ACAGAACACATAACAATAAG+AGG | 0.457854 | 1.4:+63756569 | MS.gene004968:CDS |
| AGGAAGACATATATATTGTC+TGG | 0.461260 | 1.4:+63757146 | MS.gene004968:CDS |
| ATTCTAGTTTCAACTGTCCT+TGG | 0.462241 | 1.4:+63758145 | MS.gene004968:CDS |
| ATTGCACACGCACCTCTCCC+AGG | 0.462537 | 1.4:+63758715 | MS.gene004968:CDS |
| CCGCTTGTTGATCGGCGTAA+AGG | 0.468950 | 1.4:+63758010 | MS.gene004968:CDS |
| CCATTGCAGTGCCAACTACT+TGG | 0.469410 | 1.4:-63758752 | None:intergenic |
| TTATGTATCCGCTTGTTGAT+CGG | 0.475175 | 1.4:+63758002 | MS.gene004968:CDS |
| TTGGCATACGAACATCGCCC+TGG | 0.477283 | 1.4:-63758733 | None:intergenic |
| ATTAGTCCAGAAGCAATTGC+TGG | 0.479004 | 1.4:-63759140 | None:intergenic |
| GTGTAGTGGCAGCACTTGTT+GGG | 0.479516 | 1.4:+63758628 | MS.gene004968:CDS |
| TGTCTTAATTCCACTCAGAA+AGG | 0.483712 | 1.4:+63757265 | MS.gene004968:CDS |
| ATTGCTTCTGGACTAATTTG+CGG | 0.484236 | 1.4:+63759146 | MS.gene004968:CDS |
| TGGCCGTACCGTTTCTGGTA+GGG | 0.487172 | 1.4:+63759030 | MS.gene004968:CDS |
| CAAGCTTGCAATCCAAAGGT+TGG | 0.490018 | 1.4:-63757769 | None:intergenic |
| GTTGCAAAGCCACTTGGATA+AGG | 0.490476 | 1.4:-63757492 | None:intergenic |
| ATGGCCGTACCGTTTCTGGT+AGG | 0.493169 | 1.4:+63759029 | MS.gene004968:CDS |
| TCTGGACTAATTTGCGGGGA+AGG | 0.499946 | 1.4:+63759152 | MS.gene004968:CDS |
| GAGCTTCTTCCTGTTCTACA+AGG | 0.503256 | 1.4:+63758794 | MS.gene004968:CDS |
| CAGAAACATGGCAGTTATAG+GGG | 0.504777 | 1.4:+63758872 | MS.gene004968:CDS |
| TACGAACATCGCCCTGGGAG+AGG | 0.508872 | 1.4:-63758727 | None:intergenic |
| TTGTTTGTGAGTATGATGAT+TGG | 0.510508 | 1.4:+63756593 | MS.gene004968:CDS |
| ATGAAGCTGAACCTTACAAC+AGG | 0.516868 | 1.4:+63756638 | MS.gene004968:CDS |
| CCAAGTAGTTGGCACTGCAA+TGG | 0.516937 | 1.4:+63758752 | MS.gene004968:CDS |
| CTTCCAAGCTTGCAATCCAA+AGG | 0.518270 | 1.4:-63757773 | None:intergenic |
| TTAAAGAACCTGCATTTGGT+TGG | 0.523266 | 1.4:+63757201 | MS.gene004968:CDS |
| ACCGCTGTTGCAAAGCCACT+TGG | 0.524230 | 1.4:-63757498 | None:intergenic |
| ACGGCCATGACCATCGGTAA+TGG | 0.525061 | 1.4:-63759014 | None:intergenic |
| CTTAGAAGAAACTAACATGA+AGG | 0.531827 | 1.4:+63758051 | MS.gene004968:CDS |
| AAGTATGCCCCTACCAGAAA+CGG | 0.532502 | 1.4:-63759038 | None:intergenic |
| TAATCCAATCTGATGAACAT+TGG | 0.534849 | 1.4:+63756546 | MS.gene004968:CDS |
| TCTCATTAAATCCGTGATCT+CGG | 0.542009 | 1.4:+63758656 | MS.gene004968:CDS |
| AACGGTACGGCCATGACCAT+CGG | 0.544921 | 1.4:-63759020 | None:intergenic |
| TTGTCTGGAGTAGGCACTGA+GGG | 0.548441 | 1.4:+63757161 | MS.gene004968:CDS |
| CTTTGCAATTGATATGTGCA+CGG | 0.550723 | 1.4:+63759058 | MS.gene004968:CDS |
| GCATTGCAGAATGCGAGAGA+TGG | 0.551488 | 1.4:-63758513 | None:intergenic |
| TCCAAGTGGCTTTGCAACAG+CGG | 0.554986 | 1.4:+63757497 | MS.gene004968:CDS |
| CCAATGTGGATCGGGGTGGT+TGG | 0.555058 | 1.4:+63758396 | MS.gene004968:CDS |
| CCAACCACCCCGATCCACAT+TGG | 0.558976 | 1.4:-63758396 | None:intergenic |
| TTCTACAAGGCATTTGATGT+GGG | 0.559939 | 1.4:+63758807 | MS.gene004968:CDS |
| GTGGCAGCACTTGTTGGGTG+TGG | 0.560583 | 1.4:+63758633 | MS.gene004968:CDS |
| GTAACAAATTTCATGCAGAT+AGG | 0.560658 | 1.4:-63759224 | None:intergenic |
| GTTCTACAAGGCATTTGATG+TGG | 0.561788 | 1.4:+63758806 | MS.gene004968:CDS |
| GAGAGCATTCCAATGTGGAT+CGG | 0.564131 | 1.4:+63758387 | MS.gene004968:CDS |
| TTTGCAATTGATATGTGCAC+GGG | 0.567782 | 1.4:+63759059 | MS.gene004968:CDS |
| CTCAATTTACCTTATCCAAG+TGG | 0.569415 | 1.4:+63757483 | MS.gene004968:CDS |
| TCAGCTGAGGAAACATGTGC+GGG | 0.575967 | 1.4:-63758455 | None:intergenic |
| TTAGAAGAAACTAACATGAA+GGG | 0.576320 | 1.4:+63758052 | MS.gene004968:CDS |
| GATGCCATTACCGATGGTCA+TGG | 0.577978 | 1.4:+63759010 | MS.gene004968:CDS |
| CCAGACATCCAACCAAATGC+AGG | 0.582970 | 1.4:-63757209 | None:intergenic |
| CAGAGACAAGTTCACAAGGT+GGG | 0.586027 | 1.4:-63757951 | None:intergenic |
| TCTGTAAATTAGCGCATAAG+GGG | 0.587143 | 1.4:-63758853 | None:intergenic |
| TGATTCTTTCATGTACGCCA+AGG | 0.587279 | 1.4:-63758162 | None:intergenic |
| TATTGCAGGAAGCAAGTGCA+TGG | 0.588826 | 1.4:+63757658 | MS.gene004968:intron |
| GCTAGAGCAAGAATAGCAGC+AGG | 0.590008 | 1.4:-63759188 | None:intergenic |
| TGGCATACGAACATCGCCCT+GGG | 0.590951 | 1.4:-63758732 | None:intergenic |
| TTGCACACGCACCTCTCCCA+GGG | 0.591980 | 1.4:+63758716 | MS.gene004968:CDS |
| CACTTGGATAAGGTAAATTG+AGG | 0.592998 | 1.4:-63757482 | None:intergenic |
| TTAATCAGAACATGGAGGAA+AGG | 0.596522 | 1.4:+63756501 | MS.gene004968:CDS |
| ATTGCAAGACACCGAGATCA+CGG | 0.597470 | 1.4:-63758667 | None:intergenic |
| CCTTTACGCCGATCAACAAG+CGG | 0.598669 | 1.4:-63758010 | None:intergenic |
| TTAGCTGCTGATGATATGCA+CGG | 0.598888 | 1.4:+63758321 | MS.gene004968:CDS |
| GATATGCACGGGAATCCAAA+TGG | 0.600924 | 1.4:+63758333 | MS.gene004968:CDS |
| CATAAGAGAGCACAGCTCCA+AGG | 0.601707 | 1.4:-63757976 | None:intergenic |
| ACAAATTTCATGCAGATAGG+CGG | 0.603089 | 1.4:-63759221 | None:intergenic |
| TGCGCTAATTTACAGAAACA+TGG | 0.611107 | 1.4:+63758860 | MS.gene004968:CDS |
| ATTGCTCTAATCCTTGGTGA+TGG | 0.613675 | 1.4:+63758103 | MS.gene004968:CDS |
| ACTGTGACAGGAAAAGAGAA+TGG | 0.615219 | 1.4:+63758606 | MS.gene004968:CDS |
| TGCCCCTACCAGAAACGGTA+CGG | 0.622037 | 1.4:-63759033 | None:intergenic |
| ATGTTCGTATGCCAAGTAGT+TGG | 0.622489 | 1.4:+63758741 | MS.gene004968:CDS |
| AGGAAAAGAGAATGGTGTAG+TGG | 0.626117 | 1.4:+63758614 | MS.gene004968:CDS |
| GCTGAACCTTACAACAGGAA+TGG | 0.626965 | 1.4:+63756643 | MS.gene004968:CDS |
| TTCAGCTGAGGAAACATGTG+CGG | 0.627137 | 1.4:-63758456 | None:intergenic |
| TAGCTGCTGATGATATGCAC+GGG | 0.628013 | 1.4:+63758322 | MS.gene004968:CDS |
| ACATATATATTGTCTGGAGT+AGG | 0.628251 | 1.4:+63757152 | MS.gene004968:CDS |
| GAAATGGATGCCATTACCGA+TGG | 0.631123 | 1.4:+63759004 | MS.gene004968:CDS |
| TAATTTGCGGGGAAGGACTG+TGG | 0.634672 | 1.4:+63759159 | MS.gene004968:CDS |
| ACATAGTACCATTTCAGCTG+AGG | 0.638500 | 1.4:-63758468 | None:intergenic |
| TTCTCAGGCAAAGAAGACTG+TGG | 0.640879 | 1.4:+63757733 | MS.gene004968:CDS |
| CAAAGTTGCAAGCAATGTCG+AGG | 0.653267 | 1.4:-63758915 | None:intergenic |
| AAGAGATATTAATCAGAACA+TGG | 0.654492 | 1.4:+63756493 | MS.gene004968:CDS |
| GGAGCAGAGACAAGTTCACA+AGG | 0.657179 | 1.4:-63757955 | None:intergenic |
| GAGCATTCCAATGTGGATCG+GGG | 0.663368 | 1.4:+63758389 | MS.gene004968:CDS |
| AAGTCCACTAAACATCAACA+TGG | 0.666317 | 1.4:+63756442 | MS.gene004968:CDS |
| AGGTCTCACCGATATAAACA+TGG | 0.670610 | 1.4:+63758545 | MS.gene004968:CDS |
| TTTGATGTGGGAAATCCACA+TGG | 0.672631 | 1.4:+63758819 | MS.gene004968:CDS |
| TGAAGGAGAGCATTCCAATG+TGG | 0.677015 | 1.4:+63758382 | MS.gene004968:CDS |
| TAGAACAGGAAGAAGCTCAG+AGG | 0.678038 | 1.4:-63758789 | None:intergenic |
| TGCTTCTGGACTAATTTGCG+GGG | 0.681116 | 1.4:+63759148 | MS.gene004968:CDS |
| GGACTACAAACCTTTCTGAG+TGG | 0.685333 | 1.4:-63757275 | None:intergenic |
| GGGGCTTTGAATTCTCCATG+TGG | 0.688129 | 1.4:-63758834 | None:intergenic |
| GCAGAGACAAGTTCACAAGG+TGG | 0.689164 | 1.4:-63757952 | None:intergenic |
| CATTCCAATGTGGATCGGGG+TGG | 0.693940 | 1.4:+63758392 | MS.gene004968:CDS |
| AAGTATATACGCCATCACCA+AGG | 0.720711 | 1.4:-63758114 | None:intergenic |
| ATTGTCTGGAGTAGGCACTG+AGG | 0.727451 | 1.4:+63757160 | MS.gene004968:CDS |
| AGATATTAATCAGAACATGG+AGG | 0.737419 | 1.4:+63756496 | MS.gene004968:CDS |
| AAGTAGTTGGCACTGCAATG+GGG | 0.753918 | 1.4:+63758754 | MS.gene004968:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTATATTATAATATTGC+AGG | + | chr1.4:63757644-63757663 | MS.gene004968:intron | 15.0% |
| !! | ATGTTACTAATCTTATTATT+TGG | + | chr1.4:63757864-63757883 | MS.gene004968:intron | 15.0% |
| !! | CATATAATATATAATTGGTT+TGG | + | chr1.4:63757819-63757838 | MS.gene004968:intron | 15.0% |
| !! | TCAAGCATATAATATATAAT+TGG | + | chr1.4:63757814-63757833 | MS.gene004968:intron | 15.0% |
| !! | TGCAATATTATAATATAAGA+TGG | - | chr1.4:63757645-63757664 | None:intergenic | 15.0% |
| !! | ATAAACATGGCATATAATTA+CGG | + | chr1.4:63758558-63758577 | MS.gene004968:CDS | 20.0% |
| !! | ATTATATGCCATGTTTATAT+CGG | - | chr1.4:63758556-63758575 | None:intergenic | 20.0% |
| !! | GAAAAATTCAAAAGAAGAAA+GGG | - | chr1.4:63758236-63758255 | None:intergenic | 20.0% |
| !! | GAAAATGATAAATATGTAGT+AGG | - | chr1.4:63756844-63756863 | None:intergenic | 20.0% |
| !! | TGAAAAATTCAAAAGAAGAA+AGG | - | chr1.4:63758237-63758256 | None:intergenic | 20.0% |
| !!! | ATCCAAAATTTTGTACAAAA+AGG | - | chr1.4:63757317-63757336 | None:intergenic | 20.0% |
| !!! | ATTTTTCAATCAGTTTCTTA+TGG | + | chr1.4:63757692-63757711 | MS.gene004968:CDS | 20.0% |
| !!! | TTAATTAGACACTGAATTTT+TGG | - | chr1.4:63757426-63757445 | None:intergenic | 20.0% |
| !!! | TTTTTCAATCAGTTTCTTAT+GGG | + | chr1.4:63757693-63757712 | MS.gene004968:CDS | 20.0% |
| ! | AAGAGATATTAATCAGAACA+TGG | + | chr1.4:63756493-63756512 | MS.gene004968:CDS | 25.0% |
| ! | TAAACATGGCATATAATTAC+GGG | + | chr1.4:63758559-63758578 | MS.gene004968:CDS | 25.0% |
| ! | TTAGAAGAAACTAACATGAA+GGG | + | chr1.4:63758052-63758071 | MS.gene004968:CDS | 25.0% |
| ! | TTGTGCAATTTGGAAAATAA+AGG | + | chr1.4:63757604-63757623 | MS.gene004968:intron | 25.0% |
| ! | TTTGTAGTCCTATAATACTT+TGG | + | chr1.4:63757288-63757307 | MS.gene004968:intron | 25.0% |
| !! | ATTTTTCACCCAAAAAGATT+GGG | + | chr1.4:63758982-63759001 | MS.gene004968:CDS | 25.0% |
| !! | CTCCTTTTTGTACAAAATTT+TGG | + | chr1.4:63757312-63757331 | MS.gene004968:intron | 25.0% |
| !! | TAGTTTCTTCTAAGTTTTCA+GGG | - | chr1.4:63758045-63758064 | None:intergenic | 25.0% |
| !! | TATGTTCTTTACCCTTTTTA+TGG | - | chr1.4:63758198-63758217 | None:intergenic | 25.0% |
| !! | TCTGAATAATGGTATTTTCT+TGG | - | chr1.4:63756772-63756791 | None:intergenic | 25.0% |
| !! | TTAGTTTCTTCTAAGTTTTC+AGG | - | chr1.4:63758046-63758065 | None:intergenic | 25.0% |
| !! | TTTTCAATCAGTTTCTTATG+GGG | + | chr1.4:63757694-63757713 | MS.gene004968:CDS | 25.0% |
| !!! | TAACTTTTGTTTGTGCAATT+TGG | + | chr1.4:63757594-63757613 | MS.gene004968:intron | 25.0% |
| AAGAGCAAGAACCATAAAAA+GGG | + | chr1.4:63758184-63758203 | MS.gene004968:CDS | 30.0% | |
| AATCAGATCATGTTCAAGTA+AGG | + | chr1.4:63756930-63756949 | MS.gene004968:intron | 30.0% | |
| AATTCCATGTTGATGTTTAG+TGG | - | chr1.4:63756449-63756468 | None:intergenic | 30.0% | |
| ACAGAACACATAACAATAAG+AGG | + | chr1.4:63756569-63756588 | MS.gene004968:CDS | 30.0% | |
| ACTAACATGAAGGGTTTATA+TGG | + | chr1.4:63758061-63758080 | MS.gene004968:CDS | 30.0% | |
| AGATATTAATCAGAACATGG+AGG | + | chr1.4:63756496-63756515 | MS.gene004968:CDS | 30.0% | |
| AGGAAGACATATATATTGTC+TGG | + | chr1.4:63757146-63757165 | MS.gene004968:CDS | 30.0% | |
| ATTATTTCAGCTCCTATAAC+TGG | - | chr1.4:63756530-63756549 | None:intergenic | 30.0% | |
| CAACAAAGCAAACAACAAAA+AGG | - | chr1.4:63757238-63757257 | None:intergenic | 30.0% | |
| CTAAACATCAACATGGAATT+TGG | + | chr1.4:63756449-63756468 | MS.gene004968:CDS | 30.0% | |
| CTTAGAAGAAACTAACATGA+AGG | + | chr1.4:63758051-63758070 | MS.gene004968:CDS | 30.0% | |
| GAAGAGATGTTTATAGTACT+TGG | - | chr1.4:63757562-63757581 | None:intergenic | 30.0% | |
| GAAGGGTTTATATGGTTATA+AGG | + | chr1.4:63758069-63758088 | MS.gene004968:CDS | 30.0% | |
| GTAACAAATTTCATGCAGAT+AGG | - | chr1.4:63759227-63759246 | None:intergenic | 30.0% | |
| TAATCCAATCTGATGAACAT+TGG | + | chr1.4:63756546-63756565 | MS.gene004968:CDS | 30.0% | |
| TTCTGTAAATTAGCGCATAA+GGG | - | chr1.4:63758857-63758876 | None:intergenic | 30.0% | |
| TTGTTTGTGAGTATGATGAT+TGG | + | chr1.4:63756593-63756612 | MS.gene004968:CDS | 30.0% | |
| TTTCTGTAAATTAGCGCATA+AGG | - | chr1.4:63758858-63758877 | None:intergenic | 30.0% | |
| ! | AAAGGAGTCCAAAGTATTAT+AGG | - | chr1.4:63757299-63757318 | None:intergenic | 30.0% |
| ! | ACATATATATTGTCTGGAGT+AGG | + | chr1.4:63757152-63757171 | MS.gene004968:CDS | 30.0% |
| ! | AGAATGTTTGAGCTTGTTTA+AGG | - | chr1.4:63758362-63758381 | None:intergenic | 30.0% |
| ! | ATCCATTTCCCAATCTTTTT+GGG | - | chr1.4:63758993-63759012 | None:intergenic | 30.0% |
| ! | CTTTTGTGTTTGTAAGAAGT+TGG | + | chr1.4:63756699-63756718 | MS.gene004968:CDS | 30.0% |
| ! | GATTTTTCACCCAAAAAGAT+TGG | + | chr1.4:63758981-63759000 | MS.gene004968:CDS | 30.0% |
| ! | GGAATTTGGTGAGAAAAAAA+TGG | + | chr1.4:63756463-63756482 | MS.gene004968:CDS | 30.0% |
| ! | TCTTTTTCTTTCCATCTTTC+AGG | + | chr1.4:63757342-63757361 | MS.gene004968:intron | 30.0% |
| ! | TTCTTTAAGTGGTTTTTCTC+AGG | + | chr1.4:63757718-63757737 | MS.gene004968:CDS | 30.0% |
| !! | CTTTTAAAAGTCCTGAAAGA+TGG | - | chr1.4:63757356-63757375 | None:intergenic | 30.0% |
| !!! | ATTGCTTGCAACTTTGTTTT+GGG | + | chr1.4:63758922-63758941 | MS.gene004968:CDS | 30.0% |
| !!! | CTTTTTGTTGTTTGCTTTGT+TGG | + | chr1.4:63757236-63757255 | MS.gene004968:CDS | 30.0% |
| AACAGCACAAGTCTGAATAA+TGG | - | chr1.4:63756783-63756802 | None:intergenic | 35.0% | |
| AAGTCCACTAAACATCAACA+TGG | + | chr1.4:63756442-63756461 | MS.gene004968:CDS | 35.0% | |
| ACAAATTTCATGCAGATAGG+CGG | - | chr1.4:63759224-63759243 | None:intergenic | 35.0% | |
| ACAAGCTCAAACATTCTTGA+AGG | + | chr1.4:63758365-63758384 | MS.gene004968:CDS | 35.0% | |
| ACAGAAACATGGCAGTTATA+GGG | + | chr1.4:63758871-63758890 | MS.gene004968:CDS | 35.0% | |
| ATCATCAGCAGCTAATTCTA+AGG | - | chr1.4:63758316-63758335 | None:intergenic | 35.0% | |
| ATTGCTTCTGGACTAATTTG+CGG | + | chr1.4:63759146-63759165 | MS.gene004968:CDS | 35.0% | |
| CAAGAGCAAGAACCATAAAA+AGG | + | chr1.4:63758183-63758202 | MS.gene004968:CDS | 35.0% | |
| CACTTGGATAAGGTAAATTG+AGG | - | chr1.4:63757485-63757504 | None:intergenic | 35.0% | |
| CTATCAATTGCTCTAATCCT+TGG | + | chr1.4:63758097-63758116 | MS.gene004968:CDS | 35.0% | |
| CTCAATTTACCTTATCCAAG+TGG | + | chr1.4:63757483-63757502 | MS.gene004968:CDS | 35.0% | |
| CTTTGCAATTGATATGTGCA+CGG | + | chr1.4:63759058-63759077 | MS.gene004968:CDS | 35.0% | |
| GACAGTTGAAACTAGAATCT+TGG | - | chr1.4:63758143-63758162 | None:intergenic | 35.0% | |
| GTCCTTGATTTCTAACGAAA+CGG | - | chr1.4:63756886-63756905 | None:intergenic | 35.0% | |
| TACAGAAACATGGCAGTTAT+AGG | + | chr1.4:63758870-63758889 | MS.gene004968:CDS | 35.0% | |
| TCACACACAGGATGATAAAA+TGG | + | chr1.4:63757536-63757555 | MS.gene004968:CDS | 35.0% | |
| TCGTTAATGAGATTCAGCTA+AGG | + | chr1.4:63756994-63757013 | MS.gene004968:intron | 35.0% | |
| TCTCATTAAATCCGTGATCT+CGG | + | chr1.4:63758656-63758675 | MS.gene004968:CDS | 35.0% | |
| TCTGTAAATTAGCGCATAAG+GGG | - | chr1.4:63758856-63758875 | None:intergenic | 35.0% | |
| TCTTATGGGGTTTCTTTAAG+TGG | + | chr1.4:63757707-63757726 | MS.gene004968:CDS | 35.0% | |
| TGCGCTAATTTACAGAAACA+TGG | + | chr1.4:63758860-63758879 | MS.gene004968:CDS | 35.0% | |
| TGTCTTAATTCCACTCAGAA+AGG | + | chr1.4:63757265-63757284 | MS.gene004968:CDS | 35.0% | |
| TTAAAGAACCTGCATTTGGT+TGG | + | chr1.4:63757201-63757220 | MS.gene004968:CDS | 35.0% | |
| TTAATCAGAACATGGAGGAA+AGG | + | chr1.4:63756501-63756520 | MS.gene004968:CDS | 35.0% | |
| TTCCGTTTCGTTAGAAATCA+AGG | + | chr1.4:63756881-63756900 | MS.gene004968:intron | 35.0% | |
| TTCGTTAGAAATCAAGGACA+CGG | + | chr1.4:63756887-63756906 | MS.gene004968:intron | 35.0% | |
| TTTGAACAGTTTCCAACCTT+TGG | + | chr1.4:63757757-63757776 | MS.gene004968:CDS | 35.0% | |
| TTTGCAATTGATATGTGCAC+GGG | + | chr1.4:63759059-63759078 | MS.gene004968:CDS | 35.0% | |
| ! | ACTAAAGTGCTTGAAAAAGC+TGG | + | chr1.4:63756722-63756741 | MS.gene004968:CDS | 35.0% |
| ! | CATCCATTTCCCAATCTTTT+TGG | - | chr1.4:63758994-63759013 | None:intergenic | 35.0% |
| ! | TTATGTATCCGCTTGTTGAT+CGG | + | chr1.4:63758002-63758021 | MS.gene004968:CDS | 35.0% |
| ! | TTCTACAAGGCATTTGATGT+GGG | + | chr1.4:63758807-63758826 | MS.gene004968:CDS | 35.0% |
| !! | ATTCTAGTTTCAACTGTCCT+TGG | + | chr1.4:63758145-63758164 | MS.gene004968:CDS | 35.0% |
| !! | CATTGCTTGCAACTTTGTTT+TGG | + | chr1.4:63758921-63758940 | MS.gene004968:CDS | 35.0% |
| !! | GATTTTAGCACGACTTTTGT+GGG | + | chr1.4:63757911-63757930 | MS.gene004968:CDS | 35.0% |
| !! | TTGATGTTTAGTGGACTTGA+TGG | - | chr1.4:63756440-63756459 | None:intergenic | 35.0% |
| !!! | GAAAGTTGCACTATTTTTGC+TGG | + | chr1.4:63758581-63758600 | MS.gene004968:CDS | 35.0% |
| AACCATCAACTCTGCTTTCT+TGG | - | chr1.4:63759120-63759139 | None:intergenic | 40.0% | |
| AACTCGACTACACTCTCAAT+CGG | - | chr1.4:63757025-63757044 | None:intergenic | 40.0% | |
| AAGTATATACGCCATCACCA+AGG | - | chr1.4:63758117-63758136 | None:intergenic | 40.0% | |
| ACATAGTACCATTTCAGCTG+AGG | - | chr1.4:63758471-63758490 | None:intergenic | 40.0% | |
| ACATGTTTCCTCAGCTGAAA+TGG | + | chr1.4:63758460-63758479 | MS.gene004968:CDS | 40.0% | |
| ACTGTGACAGGAAAAGAGAA+TGG | + | chr1.4:63758606-63758625 | MS.gene004968:CDS | 40.0% | |
| AGGAAAAGAGAATGGTGTAG+TGG | + | chr1.4:63758614-63758633 | MS.gene004968:CDS | 40.0% | |
| AGGTCTCACCGATATAAACA+TGG | + | chr1.4:63758545-63758564 | MS.gene004968:CDS | 40.0% | |
| ATGAAGCTGAACCTTACAAC+AGG | + | chr1.4:63756638-63756657 | MS.gene004968:CDS | 40.0% | |
| ATGTTCGTATGCCAAGTAGT+TGG | + | chr1.4:63758741-63758760 | MS.gene004968:CDS | 40.0% | |
| ATTAGTCCAGAAGCAATTGC+TGG | - | chr1.4:63759143-63759162 | None:intergenic | 40.0% | |
| ATTGCTCTAATCCTTGGTGA+TGG | + | chr1.4:63758103-63758122 | MS.gene004968:CDS | 40.0% | |
| CACCCAAAAAGATTGGGAAA+TGG | + | chr1.4:63758988-63759007 | MS.gene004968:CDS | 40.0% | |
| CAGAAACATGGCAGTTATAG+GGG | + | chr1.4:63758872-63758891 | MS.gene004968:CDS | 40.0% | |
| CATCAAATGCCTTGTAGAAC+AGG | - | chr1.4:63758806-63758825 | None:intergenic | 40.0% | |
| CTGTCCAATGTTCATCAGAT+TGG | - | chr1.4:63756553-63756572 | None:intergenic | 40.0% | |
| CTTACCTGTTGGGATTAAAC+AGG | + | chr1.4:63757126-63757145 | MS.gene004968:CDS | 40.0% | |
| GCAGCAGAGACATTCAAATT+TGG | - | chr1.4:63756671-63756690 | None:intergenic | 40.0% | |
| GCAGTTAAAGAACCTGCATT+TGG | + | chr1.4:63757197-63757216 | MS.gene004968:CDS | 40.0% | |
| GCGCAAATTAATCCAGAGTT+CGG | - | chr1.4:63757079-63757098 | None:intergenic | 40.0% | |
| TAATCCAGAGTTCGGTTAAG+AGG | - | chr1.4:63757071-63757090 | None:intergenic | 40.0% | |
| TCTTCCTGTTTAATCCCAAC+AGG | - | chr1.4:63757133-63757152 | None:intergenic | 40.0% | |
| TGATTCTTTCATGTACGCCA+AGG | - | chr1.4:63758165-63758184 | None:intergenic | 40.0% | |
| TTAGCTGCTGATGATATGCA+CGG | + | chr1.4:63758321-63758340 | MS.gene004968:CDS | 40.0% | |
| TTGATCGGCGTAAAGGAAAT+TGG | + | chr1.4:63758017-63758036 | MS.gene004968:CDS | 40.0% | |
| TTGGAACCATTCCTGTTGTA+AGG | - | chr1.4:63756652-63756671 | None:intergenic | 40.0% | |
| TTTGATGTGGGAAATCCACA+TGG | + | chr1.4:63758819-63758838 | MS.gene004968:CDS | 40.0% | |
| ! | AGGATTTGCTTCTTACCTGT+TGG | + | chr1.4:63757115-63757134 | MS.gene004968:CDS | 40.0% |
| ! | CATCAATGGTTTTCACACAC+AGG | + | chr1.4:63757524-63757543 | MS.gene004968:CDS | 40.0% |
| ! | GCTTGTTTAAGGTCACCATT+TGG | - | chr1.4:63758351-63758370 | None:intergenic | 40.0% |
| ! | GGATTTGCTTCTTACCTGTT+GGG | + | chr1.4:63757116-63757135 | MS.gene004968:CDS | 40.0% |
| ! | GTATTTTCTTGGCGAGTGAA+TGG | - | chr1.4:63756761-63756780 | None:intergenic | 40.0% |
| ! | GTTCTACAAGGCATTTGATG+TGG | + | chr1.4:63758806-63758825 | MS.gene004968:CDS | 40.0% |
| ! | GTTGCACATTTTTCTGATGC+AGG | + | chr1.4:63757446-63757465 | MS.gene004968:intron | 40.0% |
| ! | TGCTATAGCATTGCTGTTAG+CGG | + | chr1.4:63756806-63756825 | MS.gene004968:CDS | 40.0% |
| ! | TTGCTTCTGGACTAATTTGC+GGG | + | chr1.4:63759147-63759166 | MS.gene004968:CDS | 40.0% |
| !! | CGATTTTAGCACGACTTTTG+TGG | + | chr1.4:63757910-63757929 | MS.gene004968:CDS | 40.0% |
| !! | GGGTTCTTTGCTTTTGCAAT+AGG | + | chr1.4:63758942-63758961 | MS.gene004968:CDS | 40.0% |
| AAGTAGTTGGCACTGCAATG+GGG | + | chr1.4:63758754-63758773 | MS.gene004968:CDS | 45.0% | |
| AAGTATGCCCCTACCAGAAA+CGG | - | chr1.4:63759041-63759060 | None:intergenic | 45.0% | |
| ATGGCAGTTATAGGGGTTCA+AGG | + | chr1.4:63758879-63758898 | MS.gene004968:CDS | 45.0% | |
| ATGGTTCCAGCAATTGCTTC+TGG | + | chr1.4:63759134-63759153 | MS.gene004968:CDS | 45.0% | |
| ATTGCAAGACACCGAGATCA+CGG | - | chr1.4:63758670-63758689 | None:intergenic | 45.0% | |
| CAAAGTTGCAAGCAATGTCG+AGG | - | chr1.4:63758918-63758937 | None:intergenic | 45.0% | |
| CAACCTTTGGATTGCAAGCT+TGG | + | chr1.4:63757770-63757789 | MS.gene004968:CDS | 45.0% | |
| CAAGCTTGCAATCCAAAGGT+TGG | - | chr1.4:63757772-63757791 | None:intergenic | 45.0% | |
| CAAGTAGTTGGCACTGCAAT+GGG | + | chr1.4:63758753-63758772 | MS.gene004968:CDS | 45.0% | |
| CAGAGACAAGTTCACAAGGT+GGG | - | chr1.4:63757954-63757973 | None:intergenic | 45.0% | |
| CAGGTTCTTTAACTGCGCTT+GGG | - | chr1.4:63757193-63757212 | None:intergenic | 45.0% | |
| CTCCAAGAAAGCAGAGTTGA+TGG | + | chr1.4:63759115-63759134 | MS.gene004968:CDS | 45.0% | |
| CTTACCTCTTAACCGAACTC+TGG | + | chr1.4:63757064-63757083 | MS.gene004968:intron | 45.0% | |
| CTTCCAAGCTTGCAATCCAA+AGG | - | chr1.4:63757776-63757795 | None:intergenic | 45.0% | |
| GAAATGGATGCCATTACCGA+TGG | + | chr1.4:63759004-63759023 | MS.gene004968:CDS | 45.0% | |
| GAGCTTCTTCCTGTTCTACA+AGG | + | chr1.4:63758794-63758813 | MS.gene004968:CDS | 45.0% | |
| GAGGAAAGGTTGCCAGTTAT+AGG | + | chr1.4:63756515-63756534 | MS.gene004968:CDS | 45.0% | |
| GATATGCACGGGAATCCAAA+TGG | + | chr1.4:63758333-63758352 | MS.gene004968:CDS | 45.0% | |
| GCTGAACCTTACAACAGGAA+TGG | + | chr1.4:63756643-63756662 | MS.gene004968:CDS | 45.0% | |
| GGACTACAAACCTTTCTGAG+TGG | - | chr1.4:63757278-63757297 | None:intergenic | 45.0% | |
| GTTGCAAAGCCACTTGGATA+AGG | - | chr1.4:63757495-63757514 | None:intergenic | 45.0% | |
| TAGAACAGGAAGAAGCTCAG+AGG | - | chr1.4:63758792-63758811 | None:intergenic | 45.0% | |
| TAGCTGCTGATGATATGCAC+GGG | + | chr1.4:63758322-63758341 | MS.gene004968:CDS | 45.0% | |
| TATTGCAGGAAGCAAGTGCA+TGG | + | chr1.4:63757658-63757677 | MS.gene004968:intron | 45.0% | |
| TGATATGTGCACGGGTAGTT+TGG | + | chr1.4:63759067-63759086 | MS.gene004968:CDS | 45.0% | |
| TTCAGCTGAGGAAACATGTG+CGG | - | chr1.4:63758459-63758478 | None:intergenic | 45.0% | |
| TTCTCAGGCAAAGAAGACTG+TGG | + | chr1.4:63757733-63757752 | MS.gene004968:CDS | 45.0% | |
| ! | AGAGCATTCCAATGTGGATC+GGG | + | chr1.4:63758388-63758407 | MS.gene004968:CDS | 45.0% |
| ! | CTCGCATTCTGCAATGCTTT+TGG | + | chr1.4:63758519-63758538 | MS.gene004968:CDS | 45.0% |
| ! | TAGCATTGCTGTTAGCGGTA+AGG | + | chr1.4:63756811-63756830 | MS.gene004968:intron | 45.0% |
| ! | TGCTTCTGGACTAATTTGCG+GGG | + | chr1.4:63759148-63759167 | MS.gene004968:CDS | 45.0% |
| ! | TTTTTGCTGGCAACTGTGAC+AGG | + | chr1.4:63758594-63758613 | MS.gene004968:CDS | 45.0% |
| !! | GAGAGCATTCCAATGTGGAT+CGG | + | chr1.4:63758387-63758406 | MS.gene004968:CDS | 45.0% |
| !! | TGAAGGAGAGCATTCCAATG+TGG | + | chr1.4:63758382-63758401 | MS.gene004968:CDS | 45.0% |
| !!! | TTCTGCAATGCTTTTGGAGC+AGG | + | chr1.4:63758525-63758544 | MS.gene004968:CDS | 45.0% |
| !! | AATTAATTAATATTAGATAT+TGG | + | chr1.4:63757389-63757408 | MS.gene004968:intron | 5.0% |
| !! | ATAATACTAATATTAATATA+TGG | + | chr1.4:63758260-63758279 | MS.gene004968:intron | 5.0% |
| !! | TAATACTAATATTAATATAT+GGG | + | chr1.4:63758261-63758280 | MS.gene004968:intron | 5.0% |
| CCAAGTAGTTGGCACTGCAA+TGG | + | chr1.4:63758752-63758771 | MS.gene004968:CDS | 50.0% | |
| CCAGACATCCAACCAAATGC+AGG | - | chr1.4:63757212-63757231 | None:intergenic | 50.0% | |
| CCATTGCAGTGCCAACTACT+TGG | - | chr1.4:63758755-63758774 | None:intergenic | 50.0% | |
| CCTGCATTTGGTTGGATGTC+TGG | + | chr1.4:63757209-63757228 | MS.gene004968:CDS | 50.0% | |
| CCTTTACGCCGATCAACAAG+CGG | - | chr1.4:63758013-63758032 | None:intergenic | 50.0% | |
| CTTGGAGCTGTGCTCTCTTA+TGG | + | chr1.4:63757977-63757996 | MS.gene004968:CDS | 50.0% | |
| GAGCATTCCAATGTGGATCG+GGG | + | chr1.4:63758389-63758408 | MS.gene004968:CDS | 50.0% | |
| GATGCCATTACCGATGGTCA+TGG | + | chr1.4:63759010-63759029 | MS.gene004968:CDS | 50.0% | |
| GCAACAGCGGTTCTCATCAA+TGG | + | chr1.4:63757510-63757529 | MS.gene004968:CDS | 50.0% | |
| GCAGAGACAAGTTCACAAGG+TGG | - | chr1.4:63757955-63757974 | None:intergenic | 50.0% | |
| GCAGGTTCTTTAACTGCGCT+TGG | - | chr1.4:63757194-63757213 | None:intergenic | 50.0% | |
| GCATTGCAGAATGCGAGAGA+TGG | - | chr1.4:63758516-63758535 | None:intergenic | 50.0% | |
| GCTAGAGCAAGAATAGCAGC+AGG | - | chr1.4:63759191-63759210 | None:intergenic | 50.0% | |
| GGAGCAGAGACAAGTTCACA+AGG | - | chr1.4:63757958-63757977 | None:intergenic | 50.0% | |
| GTGAACTTGTCTCTGCTCCT+TGG | + | chr1.4:63757959-63757978 | MS.gene004968:CDS | 50.0% | |
| GTGTAGTCGAGTTCGATCTC+TGG | + | chr1.4:63757032-63757051 | MS.gene004968:intron | 50.0% | |
| GTGTAGTGGCAGCACTTGTT+GGG | + | chr1.4:63758628-63758647 | MS.gene004968:CDS | 50.0% | |
| TCAGCTGAGGAAACATGTGC+GGG | - | chr1.4:63758458-63758477 | None:intergenic | 50.0% | |
| TTTGCGCTTGTGTGTGTTGC+AGG | + | chr1.4:63757092-63757111 | MS.gene004968:intron | 50.0% | |
| ! | ATTGTCTGGAGTAGGCACTG+AGG | + | chr1.4:63757160-63757179 | MS.gene004968:CDS | 50.0% |
| ! | CATAAGAGAGCACAGCTCCA+AGG | - | chr1.4:63757979-63757998 | None:intergenic | 50.0% |
| ! | TAATTTGCGGGGAAGGACTG+TGG | + | chr1.4:63759159-63759178 | MS.gene004968:CDS | 50.0% |
| ! | TCCAAGTGGCTTTGCAACAG+CGG | + | chr1.4:63757497-63757516 | MS.gene004968:CDS | 50.0% |
| ! | TCTGGACTAATTTGCGGGGA+AGG | + | chr1.4:63759152-63759171 | MS.gene004968:CDS | 50.0% |
| !! | GGGGCTTTGAATTCTCCATG+TGG | - | chr1.4:63758837-63758856 | None:intergenic | 50.0% |
| !! | TTGTCTGGAGTAGGCACTGA+GGG | + | chr1.4:63757161-63757180 | MS.gene004968:CDS | 50.0% |
| AACGGTACGGCCATGACCAT+CGG | - | chr1.4:63759023-63759042 | None:intergenic | 55.0% | |
| ACCGCTGTTGCAAAGCCACT+TGG | - | chr1.4:63757501-63757520 | None:intergenic | 55.0% | |
| ACGGCCATGACCATCGGTAA+TGG | - | chr1.4:63759017-63759036 | None:intergenic | 55.0% | |
| CATTCCAATGTGGATCGGGG+TGG | + | chr1.4:63758392-63758411 | MS.gene004968:CDS | 55.0% | |
| GGTGTAGTGGCAGCACTTGT+TGG | + | chr1.4:63758627-63758646 | MS.gene004968:CDS | 55.0% | |
| TGCCCCTACCAGAAACGGTA+CGG | - | chr1.4:63759036-63759055 | None:intergenic | 55.0% | |
| TGGATCGGGGTGGTTGGATA+TGG | + | chr1.4:63758402-63758421 | MS.gene004968:CDS | 55.0% | |
| TGGCATACGAACATCGCCCT+GGG | - | chr1.4:63758735-63758754 | None:intergenic | 55.0% | |
| TTGGCATACGAACATCGCCC+TGG | - | chr1.4:63758736-63758755 | None:intergenic | 55.0% | |
| ! | AGCACGACTTTTGTGGGAGC+AGG | + | chr1.4:63757917-63757936 | MS.gene004968:CDS | 55.0% |
| ! | CCGCTTGTTGATCGGCGTAA+AGG | + | chr1.4:63758010-63758029 | MS.gene004968:CDS | 55.0% |
| !! | ATGGCCGTACCGTTTCTGGT+AGG | + | chr1.4:63759029-63759048 | MS.gene004968:CDS | 55.0% |
| !! | TGGCCGTACCGTTTCTGGTA+GGG | + | chr1.4:63759030-63759049 | MS.gene004968:CDS | 55.0% |
| ATTGCACACGCACCTCTCCC+AGG | + | chr1.4:63758715-63758734 | MS.gene004968:CDS | 60.0% | |
| CCAACCACCCCGATCCACAT+TGG | - | chr1.4:63758399-63758418 | None:intergenic | 60.0% | |
| CCAATGTGGATCGGGGTGGT+TGG | + | chr1.4:63758396-63758415 | MS.gene004968:CDS | 60.0% | |
| GCGCTTGTGTGTGTTGCAGG+AGG | + | chr1.4:63757095-63757114 | MS.gene004968:intron | 60.0% | |
| GGTCATGGCCGTACCGTTTC+TGG | + | chr1.4:63759025-63759044 | MS.gene004968:CDS | 60.0% | |
| TACGAACATCGCCCTGGGAG+AGG | - | chr1.4:63758730-63758749 | None:intergenic | 60.0% | |
| TTGCACACGCACCTCTCCCA+GGG | + | chr1.4:63758716-63758735 | MS.gene004968:CDS | 60.0% | |
| ! | GTGGCAGCACTTGTTGGGTG+TGG | + | chr1.4:63758633-63758652 | MS.gene004968:CDS | 60.0% |
| !! | GGCCGTACCGTTTCTGGTAG+GGG | + | chr1.4:63759031-63759050 | MS.gene004968:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 63756428 | 63759253 | 63756428 | ID=MS.gene004968 |
| chr1.4 | mRNA | 63756428 | 63759253 | 63756428 | ID=MS.gene004968.t1;Parent=MS.gene004968 |
| chr1.4 | exon | 63756428 | 63756827 | 63756428 | ID=MS.gene004968.t1.exon1;Parent=MS.gene004968.t1 |
| chr1.4 | CDS | 63756428 | 63756827 | 63756428 | ID=cds.MS.gene004968.t1;Parent=MS.gene004968.t1 |
| chr1.4 | exon | 63757114 | 63757286 | 63757114 | ID=MS.gene004968.t1.exon2;Parent=MS.gene004968.t1 |
| chr1.4 | CDS | 63757114 | 63757286 | 63757114 | ID=cds.MS.gene004968.t1;Parent=MS.gene004968.t1 |
| chr1.4 | exon | 63757468 | 63757562 | 63757468 | ID=MS.gene004968.t1.exon3;Parent=MS.gene004968.t1 |
| chr1.4 | CDS | 63757468 | 63757562 | 63757468 | ID=cds.MS.gene004968.t1;Parent=MS.gene004968.t1 |
| chr1.4 | exon | 63757666 | 63757800 | 63757666 | ID=MS.gene004968.t1.exon4;Parent=MS.gene004968.t1 |
| chr1.4 | CDS | 63757666 | 63757800 | 63757666 | ID=cds.MS.gene004968.t1;Parent=MS.gene004968.t1 |
| chr1.4 | exon | 63757901 | 63758205 | 63757901 | ID=MS.gene004968.t1.exon5;Parent=MS.gene004968.t1 |
| chr1.4 | CDS | 63757901 | 63758205 | 63757901 | ID=cds.MS.gene004968.t1;Parent=MS.gene004968.t1 |
| chr1.4 | exon | 63758319 | 63759253 | 63758319 | ID=MS.gene004968.t1.exon6;Parent=MS.gene004968.t1 |
| chr1.4 | CDS | 63758319 | 63759253 | 63758319 | ID=cds.MS.gene004968.t1;Parent=MS.gene004968.t1 |
| Gene Sequence |
| Protein sequence |
