Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07505.t1 | XP_013468866.1 | 99.1 | 680 | 6 | 0 | 1 | 680 | 1 | 680 | 0.00E+00 | 1357.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07505.t1 | Q6R3L0 | 73.3 | 636 | 167 | 1 | 45 | 680 | 41 | 673 | 1.1e-284 | 980.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07505.t1 | A0A072VND8 | 99.1 | 680 | 6 | 0 | 1 | 680 | 1 | 680 | 0.0e+00 | 1357.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057887 | MS.gene07505 | 0.817926 | 2.56E-52 | -1.69E-46 |
| MS.gene059868 | MS.gene07505 | 0.81323 | 2.84E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93375 | MS.gene07505 | PPI |
| MS.gene95674 | MS.gene07505 | PPI |
| MS.gene07505 | MS.gene33454 | PPI |
| MS.gene07505 | MS.gene06650 | PPI |
| MS.gene07505 | MS.gene069003 | PPI |
| MS.gene013539 | MS.gene07505 | PPI |
| MS.gene07505 | MS.gene99504 | PPI |
| MS.gene07505 | MS.gene052792 | PPI |
| MS.gene07505 | MS.gene057201 | PPI |
| MS.gene07505 | MS.gene06864 | PPI |
| MS.gene07505 | MS.gene33707 | PPI |
| MS.gene07505 | MS.gene071032 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07505.t1 | MTR_1g077840 | 99.118 | 680 | 6 | 0 | 1 | 680 | 1 | 680 | 0.0 | 1388 |
| MS.gene07505.t1 | MTR_3g092090 | 64.812 | 665 | 231 | 2 | 17 | 680 | 4 | 666 | 0.0 | 920 |
| MS.gene07505.t1 | MTR_3g092090 | 64.931 | 653 | 226 | 2 | 17 | 668 | 4 | 654 | 0.0 | 903 |
| MS.gene07505.t1 | MTR_1g007580 | 62.704 | 673 | 242 | 5 | 11 | 680 | 6 | 672 | 0.0 | 875 |
| MS.gene07505.t1 | MTR_0312s0020 | 62.085 | 662 | 246 | 4 | 23 | 680 | 12 | 672 | 0.0 | 864 |
| MS.gene07505.t1 | MTR_1g007540 | 62.085 | 662 | 246 | 4 | 23 | 680 | 12 | 672 | 0.0 | 864 |
| MS.gene07505.t1 | MTR_7g028250 | 53.365 | 639 | 289 | 5 | 46 | 677 | 37 | 673 | 0.0 | 727 |
| MS.gene07505.t1 | MTR_6g077870 | 51.638 | 641 | 295 | 7 | 47 | 679 | 66 | 699 | 0.0 | 711 |
| MS.gene07505.t1 | MTR_5g091600 | 51.124 | 667 | 313 | 7 | 22 | 679 | 7 | 669 | 0.0 | 704 |
| MS.gene07505.t1 | MTR_3g063490 | 52.895 | 639 | 292 | 5 | 47 | 679 | 48 | 683 | 0.0 | 697 |
| MS.gene07505.t1 | MTR_3g063520 | 52.269 | 639 | 296 | 5 | 47 | 679 | 42 | 677 | 0.0 | 674 |
| MS.gene07505.t1 | MTR_6g077870 | 51.215 | 535 | 252 | 6 | 153 | 679 | 5 | 538 | 0.0 | 594 |
| MS.gene07505.t1 | MTR_1626s0010 | 61.277 | 235 | 91 | 0 | 224 | 458 | 1 | 235 | 1.10e-102 | 313 |
| MS.gene07505.t1 | MTR_5g091615 | 56.291 | 151 | 65 | 1 | 530 | 679 | 59 | 209 | 1.03e-50 | 178 |
| MS.gene07505.t1 | MTR_0312s0050 | 74.699 | 83 | 21 | 0 | 47 | 129 | 38 | 120 | 1.53e-38 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07505.t1 | AT4G24120 | 70.765 | 667 | 190 | 2 | 16 | 680 | 10 | 673 | 0.0 | 999 |
| MS.gene07505.t1 | AT5G53550 | 64.468 | 667 | 231 | 4 | 16 | 680 | 9 | 671 | 0.0 | 910 |
| MS.gene07505.t1 | AT5G53550 | 64.468 | 667 | 231 | 4 | 16 | 680 | 9 | 671 | 0.0 | 910 |
| MS.gene07505.t1 | AT5G53550 | 64.468 | 667 | 231 | 4 | 16 | 680 | 9 | 671 | 0.0 | 910 |
| MS.gene07505.t1 | AT5G53550 | 64.468 | 667 | 231 | 4 | 16 | 680 | 9 | 671 | 0.0 | 910 |
| MS.gene07505.t1 | AT5G53550 | 64.468 | 667 | 231 | 4 | 16 | 680 | 9 | 671 | 0.0 | 910 |
| MS.gene07505.t1 | AT5G24380 | 63.664 | 666 | 230 | 4 | 20 | 680 | 5 | 663 | 0.0 | 902 |
| MS.gene07505.t1 | AT1G65730 | 52.500 | 680 | 298 | 9 | 19 | 679 | 1 | 674 | 0.0 | 732 |
| MS.gene07505.t1 | AT5G41000 | 51.791 | 670 | 315 | 4 | 18 | 680 | 2 | 670 | 0.0 | 722 |
| MS.gene07505.t1 | AT3G27020 | 51.343 | 670 | 311 | 6 | 20 | 677 | 4 | 670 | 0.0 | 722 |
| MS.gene07505.t1 | AT5G53550 | 64.775 | 511 | 177 | 2 | 171 | 680 | 1 | 509 | 0.0 | 713 |
| MS.gene07505.t1 | AT5G41000 | 50.526 | 665 | 306 | 4 | 18 | 680 | 2 | 645 | 0.0 | 683 |
| MS.gene07505.t1 | AT1G48370 | 51.903 | 657 | 295 | 7 | 40 | 680 | 59 | 710 | 0.0 | 683 |
| MS.gene07505.t1 | AT3G17650 | 50.228 | 657 | 307 | 7 | 39 | 680 | 49 | 700 | 0.0 | 674 |
| MS.gene07505.t1 | AT3G17650 | 50.228 | 657 | 307 | 7 | 39 | 680 | 49 | 700 | 0.0 | 674 |
| MS.gene07505.t1 | AT1G48370 | 52.134 | 539 | 244 | 5 | 156 | 680 | 9 | 547 | 0.0 | 568 |
| MS.gene07505.t1 | AT5G41000 | 51.515 | 495 | 232 | 4 | 193 | 680 | 1 | 494 | 0.0 | 534 |
| MS.gene07505.t1 | AT5G45450 | 48.077 | 208 | 101 | 2 | 474 | 680 | 1 | 202 | 6.27e-65 | 214 |
Find 151 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCATGGCCGTACCGTTTC+TGG | 0.148320 | 1.3:+55571922 | MS.gene07505:CDS |
| CTCGCATTCTGCAATGCTTT+TGG | 0.175738 | 1.3:+55571416 | MS.gene07505:CDS |
| CATTGCTTGCAACTTTGTTT+TGG | 0.185014 | 1.3:+55571818 | MS.gene07505:CDS |
| AGAATGTTTGAGCTTGTTTA+AGG | 0.190142 | 1.3:-55571256 | None:intergenic |
| CTAAACATCAACATGGAATT+TGG | 0.220436 | 1.3:+55569099 | MS.gene07505:CDS |
| ATGGTTCCAGCAATTGCTTC+TGG | 0.222492 | 1.3:+55572031 | MS.gene07505:CDS |
| AACCATCAACTCTGCTTTCT+TGG | 0.226520 | 1.3:-55572014 | None:intergenic |
| CTTGGAGCTGTGCTCTCTTA+TGG | 0.235520 | 1.3:+55570874 | MS.gene07505:CDS |
| CAAGAGCAAGAACCATAAAA+AGG | 0.240574 | 1.3:+55571080 | MS.gene07505:CDS |
| GCAGCAGAGACATTCAAATT+TGG | 0.267639 | 1.3:-55569318 | None:intergenic |
| TTGATCGGCGTAAAGGAAAT+TGG | 0.270852 | 1.3:+55570914 | MS.gene07505:CDS |
| GAAGGGTTTATATGGTTATA+AGG | 0.272710 | 1.3:+55570966 | MS.gene07505:CDS |
| CCTGCATTTGGTTGGATGTC+TGG | 0.275545 | 1.3:+55569934 | MS.gene07505:CDS |
| AATTCCATGTTGATGTTTAG+TGG | 0.292963 | 1.3:-55569096 | None:intergenic |
| ACTAACATGAAGGGTTTATA+TGG | 0.306840 | 1.3:+55570958 | MS.gene07505:CDS |
| ACAGAAACATGGCAGTTATA+GGG | 0.308924 | 1.3:+55571768 | MS.gene07505:CDS |
| TCACACACAGGATGATAAAA+TGG | 0.314433 | 1.3:+55570432 | MS.gene07505:CDS |
| TTTGAACAGTTTCCAACCTT+TGG | 0.315680 | 1.3:+55570654 | MS.gene07505:CDS |
| CTGTCCAATGTTCATCAGAT+TGG | 0.320759 | 1.3:-55569200 | None:intergenic |
| TACAGAAACATGGCAGTTAT+AGG | 0.321915 | 1.3:+55571767 | MS.gene07505:CDS |
| CAACAAAGCAAACAACAAAA+AGG | 0.327369 | 1.3:-55569960 | None:intergenic |
| CTCCAAGAAAGCAGAGTTGA+TGG | 0.329189 | 1.3:+55572012 | MS.gene07505:CDS |
| CAACCTTTGGATTGCAAGCT+TGG | 0.329374 | 1.3:+55570667 | MS.gene07505:CDS |
| ATTATATGCCATGTTTATAT+CGG | 0.361843 | 1.3:-55571450 | None:intergenic |
| ATAAACATGGCATATAATTA+CGG | 0.369510 | 1.3:+55571455 | MS.gene07505:CDS |
| GAAGAAAGGTTGCCAGTTAT+AGG | 0.369530 | 1.3:+55569165 | MS.gene07505:CDS |
| ATTACTTCAGCTCCTATAAC+TGG | 0.372038 | 1.3:-55569177 | None:intergenic |
| TTTCTGTAAATTAGCGCATA+AGG | 0.374435 | 1.3:-55571752 | None:intergenic |
| GGTGTAGTGGCAGCACTTGT+TGG | 0.376653 | 1.3:+55571524 | MS.gene07505:CDS |
| TGGATCGGGGTGGTTGGATA+TGG | 0.377446 | 1.3:+55571299 | MS.gene07505:CDS |
| TTGGAACCATTCCTGTTGTA+AGG | 0.381075 | 1.3:-55569299 | None:intergenic |
| CATCAAATGCCTTGTAGAAC+AGG | 0.386991 | 1.3:-55571700 | None:intergenic |
| TTGCTTCTGGACTAATTTGC+GGG | 0.390184 | 1.3:+55572044 | MS.gene07505:CDS |
| GTGAACTTGTCTCTGCTCCT+TGG | 0.393687 | 1.3:+55570856 | MS.gene07505:CDS |
| GCATGTTTCCTCAGCTGAAA+TGG | 0.394853 | 1.3:+55571357 | MS.gene07505:CDS |
| CTATCAATTGCTCTAATCCT+TGG | 0.398456 | 1.3:+55570994 | MS.gene07505:CDS |
| CATATCTGTTGGGATTAAAC+AGG | 0.406006 | 1.3:+55569851 | MS.gene07505:CDS |
| TCTTATGGGGTTTCTTTAAG+TGG | 0.406690 | 1.3:+55570604 | MS.gene07505:CDS |
| AGAGCATTCCAATGTGGATC+GGG | 0.410494 | 1.3:+55571285 | MS.gene07505:CDS |
| GCAACAGCGGTTCTCATCAA+TGG | 0.410553 | 1.3:+55570406 | MS.gene07505:CDS |
| TGCTATAGCATTGCTGTTAG+CGG | 0.415612 | 1.3:+55569456 | MS.gene07505:CDS |
| ACAAGCTCAAACATTCTTGA+AGG | 0.418237 | 1.3:+55571262 | MS.gene07505:CDS |
| TAAACATGGCATATAATTAC+GGG | 0.419343 | 1.3:+55571456 | MS.gene07505:CDS |
| TTGATGTTTAGTGGACTTGA+TGG | 0.419351 | 1.3:-55569087 | None:intergenic |
| GCAGTTAAAGAACCTGCATT+TGG | 0.420611 | 1.3:+55569922 | MS.gene07505:CDS |
| TTCTGTAAATTAGCGCATAA+GGG | 0.423993 | 1.3:-55571751 | None:intergenic |
| TGATATGTGCACAGGTAGTT+TGG | 0.424107 | 1.3:+55571964 | MS.gene07505:CDS |
| CAGGTTCTTTAACTGCGCTT+GGG | 0.424884 | 1.3:-55569915 | None:intergenic |
| GCAGGTTCTTTAACTGCGCT+TGG | 0.426747 | 1.3:-55569916 | None:intergenic |
| AACAGCACAAGTCTGAATAA+TGG | 0.434716 | 1.3:-55569430 | None:intergenic |
| GACAGTTGAAACTAGAATCT+TGG | 0.437254 | 1.3:-55571037 | None:intergenic |
| AGGATTTGCTTCATATCTGT+TGG | 0.442291 | 1.3:+55569840 | MS.gene07505:CDS |
| GCTTGTTTAAGGTCACCATT+TGG | 0.442681 | 1.3:-55571245 | None:intergenic |
| ATGGCAGTTATAGGGGTTCA+AGG | 0.442747 | 1.3:+55571776 | MS.gene07505:CDS |
| CAAGTAGTTGGCACTGCAAT+GGG | 0.442885 | 1.3:+55571650 | MS.gene07505:CDS |
| GGCCGTACCGTTTCTGGTAG+GGG | 0.452239 | 1.3:+55571928 | MS.gene07505:CDS |
| AGGAAGACATATGTGTTGTC+TGG | 0.456289 | 1.3:+55569871 | MS.gene07505:CDS |
| ACAGAACACATAACAATAAG+AGG | 0.457854 | 1.3:+55569219 | MS.gene07505:CDS |
| GGATTTGCTTCATATCTGTT+GGG | 0.460752 | 1.3:+55569841 | MS.gene07505:CDS |
| ATTCTAGTTTCAACTGTCCT+TGG | 0.462241 | 1.3:+55571042 | MS.gene07505:CDS |
| ATTGCACACGCACCTCTCCC+AGG | 0.462537 | 1.3:+55571612 | MS.gene07505:CDS |
| CCGCTTGTTGATCGGCGTAA+AGG | 0.468950 | 1.3:+55570907 | MS.gene07505:CDS |
| CCATTGCAGTGCCAACTACT+TGG | 0.469410 | 1.3:-55571649 | None:intergenic |
| TATTTCAGGAAGCAAGTACA+TGG | 0.472341 | 1.3:+55570555 | MS.gene07505:intron |
| TTATGTATCCGCTTGTTGAT+CGG | 0.475175 | 1.3:+55570899 | MS.gene07505:CDS |
| GTTGCAAAACCACTTGGATA+AGG | 0.475631 | 1.3:-55570388 | None:intergenic |
| TTGGCATACGAACATCGCCC+TGG | 0.477283 | 1.3:-55571630 | None:intergenic |
| ATTAGTCCAGAAGCAATTGC+TGG | 0.479004 | 1.3:-55572037 | None:intergenic |
| GTGTAGTGGCAGCACTTGTT+GGG | 0.479516 | 1.3:+55571525 | MS.gene07505:CDS |
| TGTCTTAATTCCACTCAGAA+AGG | 0.483712 | 1.3:+55569990 | MS.gene07505:CDS |
| ATTGCTTCTGGACTAATTTG+CGG | 0.484236 | 1.3:+55572043 | MS.gene07505:CDS |
| TGGCCGTACCGTTTCTGGTA+GGG | 0.487172 | 1.3:+55571927 | MS.gene07505:CDS |
| CAAGCTTGCAATCCAAAGGT+TGG | 0.490018 | 1.3:-55570666 | None:intergenic |
| ATGGCCGTACCGTTTCTGGT+AGG | 0.493169 | 1.3:+55571926 | MS.gene07505:CDS |
| TCTGGACTAATTTGCGGGGA+AGG | 0.499946 | 1.3:+55572049 | MS.gene07505:CDS |
| GAGCTTCTTCCTGTTCTACA+AGG | 0.503256 | 1.3:+55571691 | MS.gene07505:CDS |
| CAGAAACATGGCAGTTATAG+GGG | 0.504777 | 1.3:+55571769 | MS.gene07505:CDS |
| TACGAACATCGCCCTGGGAG+AGG | 0.508872 | 1.3:-55571624 | None:intergenic |
| TTGTTTGTGAGTATGATGAT+TGG | 0.510508 | 1.3:+55569243 | MS.gene07505:CDS |
| ATGAAGCTGAACCTTACAAC+AGG | 0.516868 | 1.3:+55569288 | MS.gene07505:CDS |
| CCAAGTAGTTGGCACTGCAA+TGG | 0.516937 | 1.3:+55571649 | MS.gene07505:CDS |
| CTTCCAAGCTTGCAATCCAA+AGG | 0.518270 | 1.3:-55570670 | None:intergenic |
| TTAATCAGAACATGGAAGAA+AGG | 0.519391 | 1.3:+55569151 | MS.gene07505:CDS |
| TTAAAGAACCTGCATTTGGT+TGG | 0.523266 | 1.3:+55569926 | MS.gene07505:CDS |
| ACGGCCATGACCATCGGTAA+TGG | 0.525061 | 1.3:-55571911 | None:intergenic |
| CTTAGAAGAAACTAACATGA+AGG | 0.531827 | 1.3:+55570948 | MS.gene07505:CDS |
| AAGTATGCCCCTACCAGAAA+CGG | 0.532502 | 1.3:-55571935 | None:intergenic |
| ACCGCTGTTGCAAAACCACT+TGG | 0.532997 | 1.3:-55570394 | None:intergenic |
| TCTCATTAAATCCGTGATCT+CGG | 0.542009 | 1.3:+55571553 | MS.gene07505:CDS |
| AACGGTACGGCCATGACCAT+CGG | 0.544921 | 1.3:-55571917 | None:intergenic |
| GCATTGCAGAATGCGAGAGA+TGG | 0.551488 | 1.3:-55571410 | None:intergenic |
| TAATCCAATCTGATGAACAT+TGG | 0.553322 | 1.3:+55569196 | MS.gene07505:CDS |
| CCAATGTGGATCGGGGTGGT+TGG | 0.555058 | 1.3:+55571293 | MS.gene07505:CDS |
| CCAACCACCCCGATCCACAT+TGG | 0.558976 | 1.3:-55571293 | None:intergenic |
| TTCTACAAGGCATTTGATGT+GGG | 0.559939 | 1.3:+55571704 | MS.gene07505:CDS |
| TTTGCAATTGATATGTGCAC+AGG | 0.560248 | 1.3:+55571956 | MS.gene07505:CDS |
| GTGGCAGCACTTGTTGGGTG+TGG | 0.560583 | 1.3:+55571530 | MS.gene07505:CDS |
| GTAACAAATTTCATGCAGAT+AGG | 0.560658 | 1.3:-55572121 | None:intergenic |
| CCAGACATCCAACCAAATGC+AGG | 0.560714 | 1.3:-55569934 | None:intergenic |
| GTTCTACAAGGCATTTGATG+TGG | 0.561788 | 1.3:+55571703 | MS.gene07505:CDS |
| GAGAGCATTCCAATGTGGAT+CGG | 0.564131 | 1.3:+55571284 | MS.gene07505:CDS |
| CTCAATTTACCTTATCCAAG+TGG | 0.567851 | 1.3:+55570379 | MS.gene07505:CDS |
| TTAGAAGAAACTAACATGAA+GGG | 0.576320 | 1.3:+55570949 | MS.gene07505:CDS |
| GATGCCATTACCGATGGTCA+TGG | 0.577978 | 1.3:+55571907 | MS.gene07505:CDS |
| CACTTGGATAAGGTAAATTG+AGG | 0.578530 | 1.3:-55570378 | None:intergenic |
| CAGAGACAAGTTCACAAGGT+GGG | 0.586027 | 1.3:-55570848 | None:intergenic |
| TCTGTAAATTAGCGCATAAG+GGG | 0.587143 | 1.3:-55571750 | None:intergenic |
| TGATTCTTTCATGTACGCCA+AGG | 0.587279 | 1.3:-55571059 | None:intergenic |
| GCTAGAGCAAGAATAGCAGC+AGG | 0.590008 | 1.3:-55572085 | None:intergenic |
| TGGCATACGAACATCGCCCT+GGG | 0.590951 | 1.3:-55571629 | None:intergenic |
| TTGCACACGCACCTCTCCCA+GGG | 0.591980 | 1.3:+55571613 | MS.gene07505:CDS |
| ATTGCAAGACACCGAGATCA+CGG | 0.597470 | 1.3:-55571564 | None:intergenic |
| CCTTTACGCCGATCAACAAG+CGG | 0.598669 | 1.3:-55570907 | None:intergenic |
| TTAGCTGCTGATGATATGCA+CGG | 0.598888 | 1.3:+55571218 | MS.gene07505:CDS |
| TTGTCTGGAGTAGGCACTGA+GGG | 0.599934 | 1.3:+55569886 | MS.gene07505:CDS |
| GATATGCACGGGAATCCAAA+TGG | 0.600924 | 1.3:+55571230 | MS.gene07505:CDS |
| CATAAGAGAGCACAGCTCCA+AGG | 0.601707 | 1.3:-55570873 | None:intergenic |
| ACAAATTTCATGCAGATAGG+CGG | 0.603089 | 1.3:-55572118 | None:intergenic |
| TCAGCTGAGGAAACATGCGC+GGG | 0.603914 | 1.3:-55571352 | None:intergenic |
| ACATATGTGTTGTCTGGAGT+AGG | 0.606766 | 1.3:+55569877 | MS.gene07505:CDS |
| TGCGCTAATTTACAGAAACA+TGG | 0.611107 | 1.3:+55571757 | MS.gene07505:CDS |
| ATTGCTCTAATCCTTGGTGA+TGG | 0.613675 | 1.3:+55571000 | MS.gene07505:CDS |
| ACTGTGACAGGAAAAGAGAA+TGG | 0.615219 | 1.3:+55571503 | MS.gene07505:CDS |
| TGCCCCTACCAGAAACGGTA+CGG | 0.622037 | 1.3:-55571930 | None:intergenic |
| ATGTTCGTATGCCAAGTAGT+TGG | 0.622489 | 1.3:+55571638 | MS.gene07505:CDS |
| AGGAAAAGAGAATGGTGTAG+TGG | 0.626117 | 1.3:+55571511 | MS.gene07505:CDS |
| GCTGAACCTTACAACAGGAA+TGG | 0.626965 | 1.3:+55569293 | MS.gene07505:CDS |
| TAGCTGCTGATGATATGCAC+GGG | 0.628013 | 1.3:+55571219 | MS.gene07505:CDS |
| TTCAGCTGAGGAAACATGCG+CGG | 0.629166 | 1.3:-55571353 | None:intergenic |
| GAAATGGATGCCATTACCGA+TGG | 0.631123 | 1.3:+55571901 | MS.gene07505:CDS |
| TAATTTGCGGGGAAGGACTG+TGG | 0.634672 | 1.3:+55572056 | MS.gene07505:CDS |
| ACATAGTACCATTTCAGCTG+AGG | 0.638500 | 1.3:-55571365 | None:intergenic |
| TTCTCAGGCAAAGAAGACTG+TGG | 0.640879 | 1.3:+55570630 | MS.gene07505:CDS |
| AAGAGATATTAATCAGAACA+TGG | 0.647672 | 1.3:+55569143 | MS.gene07505:CDS |
| CAAAGTTGCAAGCAATGTCG+AGG | 0.653267 | 1.3:-55571812 | None:intergenic |
| GGAGCAGAGACAAGTTCACA+AGG | 0.657179 | 1.3:-55570852 | None:intergenic |
| GAGCATTCCAATGTGGATCG+GGG | 0.663368 | 1.3:+55571286 | MS.gene07505:CDS |
| AAGTCCACTAAACATCAACA+TGG | 0.666317 | 1.3:+55569092 | MS.gene07505:CDS |
| ATTTCAGGAAGCAAGTACAT+GGG | 0.670330 | 1.3:+55570556 | MS.gene07505:intron |
| AGGTCTCACCGATATAAACA+TGG | 0.670610 | 1.3:+55571442 | MS.gene07505:CDS |
| TTTGATGTGGGAAATCCACA+TGG | 0.672631 | 1.3:+55571716 | MS.gene07505:CDS |
| TGAAGGAGAGCATTCCAATG+TGG | 0.677015 | 1.3:+55571279 | MS.gene07505:CDS |
| TAGAACAGGAAGAAGCTCAG+AGG | 0.678038 | 1.3:-55571686 | None:intergenic |
| TGCTTCTGGACTAATTTGCG+GGG | 0.681116 | 1.3:+55572045 | MS.gene07505:CDS |
| GGACTACAAACCTTTCTGAG+TGG | 0.685333 | 1.3:-55570000 | None:intergenic |
| GGGGCTTTGAATTCTCCATG+TGG | 0.688129 | 1.3:-55571731 | None:intergenic |
| GCAGAGACAAGTTCACAAGG+TGG | 0.689164 | 1.3:-55570849 | None:intergenic |
| CATTCCAATGTGGATCGGGG+TGG | 0.693940 | 1.3:+55571289 | MS.gene07505:CDS |
| AAGTATATACGCCATCACCA+AGG | 0.720711 | 1.3:-55571011 | None:intergenic |
| AAGTAGTTGGCACTGCAATG+GGG | 0.753918 | 1.3:+55571651 | MS.gene07505:CDS |
| GTTGTCTGGAGTAGGCACTG+AGG | 0.773435 | 1.3:+55569885 | MS.gene07505:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTATATTATAATATTTC+AGG | + | chr1.3:55570541-55570560 | MS.gene07505:intron | 10.0% |
| !! | TGAAATATTATAATATAAGA+TGG | - | chr1.3:55570542-55570561 | None:intergenic | 10.0% |
| !! | ATGTTACTAATCTTATTATT+TGG | + | chr1.3:55570761-55570780 | MS.gene07505:intron | 15.0% |
| !! | CATATAATATATAATTGGTT+TGG | + | chr1.3:55570716-55570735 | MS.gene07505:intron | 15.0% |
| !! | TCAAGCATATAATATATAAT+TGG | + | chr1.3:55570711-55570730 | MS.gene07505:intron | 15.0% |
| !!! | AAGTAGATTTTATTAAAAAG+TGG | + | chr1.3:55570169-55570188 | MS.gene07505:intron | 15.0% |
| !!! | TTAATAAAATCTACTTCTTT+TGG | - | chr1.3:55570165-55570184 | None:intergenic | 15.0% |
| !! | ATAAACATGGCATATAATTA+CGG | + | chr1.3:55571455-55571474 | MS.gene07505:CDS | 20.0% |
| !! | ATTATATGCCATGTTTATAT+CGG | - | chr1.3:55571453-55571472 | None:intergenic | 20.0% |
| !! | GAAAAATTCAAAAGAAGAAA+GGG | - | chr1.3:55571133-55571152 | None:intergenic | 20.0% |
| !! | GAAAATGATAAATATGTAGT+AGG | - | chr1.3:55569494-55569513 | None:intergenic | 20.0% |
| !! | TAACATTCTCCTTAATTAAT+TGG | - | chr1.3:55570112-55570131 | None:intergenic | 20.0% |
| !! | TGAAAAATTCAAAAGAAGAA+AGG | - | chr1.3:55571134-55571153 | None:intergenic | 20.0% |
| !!! | ATCCAAATTTTTGTACAAAA+AGG | - | chr1.3:55570042-55570061 | None:intergenic | 20.0% |
| !!! | TCATTTTTTTGAGAACAAAA+TGG | + | chr1.3:55569771-55569790 | MS.gene07505:intron | 20.0% |
| !!! | TTAATTAGACACTGAATTTT+TGG | - | chr1.3:55570322-55570341 | None:intergenic | 20.0% |
| ! | AAAGAAGCTCCAATTAATTA+AGG | + | chr1.3:55570100-55570119 | MS.gene07505:intron | 25.0% |
| ! | AAGAGATATTAATCAGAACA+TGG | + | chr1.3:55569143-55569162 | MS.gene07505:CDS | 25.0% |
| ! | TAAACATGGCATATAATTAC+GGG | + | chr1.3:55571456-55571475 | MS.gene07505:CDS | 25.0% |
| ! | TGTTGCAATTTGGAAAATAA+AGG | + | chr1.3:55570501-55570520 | MS.gene07505:intron | 25.0% |
| ! | TTAGAAGAAACTAACATGAA+GGG | + | chr1.3:55570949-55570968 | MS.gene07505:CDS | 25.0% |
| ! | TTTGTAGTCCTATAATACTT+TGG | + | chr1.3:55570013-55570032 | MS.gene07505:intron | 25.0% |
| !! | ATTTTTCACCCAAAAAGATT+GGG | + | chr1.3:55571879-55571898 | MS.gene07505:CDS | 25.0% |
| !! | CTCCTTTTTGTACAAAAATT+TGG | + | chr1.3:55570037-55570056 | MS.gene07505:intron | 25.0% |
| !! | TAGTTTCTTCTAAGTTTTCA+GGG | - | chr1.3:55570942-55570961 | None:intergenic | 25.0% |
| !! | TATGTTCTTTACCCTTTTTA+TGG | - | chr1.3:55571095-55571114 | None:intergenic | 25.0% |
| !! | TCTGAATAATGGTATTTTCT+TGG | - | chr1.3:55569422-55569441 | None:intergenic | 25.0% |
| !! | TTAGTTTCTTCTAAGTTTTC+AGG | - | chr1.3:55570943-55570962 | None:intergenic | 25.0% |
| !!! | AACTTTTGTTTGTTGCAATT+TGG | + | chr1.3:55570491-55570510 | MS.gene07505:intron | 25.0% |
| !!! | ATTTTTCGATCAGTTTCTTA+TGG | + | chr1.3:55570589-55570608 | MS.gene07505:CDS | 25.0% |
| !!! | CATTTAAAAGTACTGAAAGA+TGG | - | chr1.3:55570078-55570097 | None:intergenic | 25.0% |
| !!! | TTTTTCGATCAGTTTCTTAT+GGG | + | chr1.3:55570590-55570609 | MS.gene07505:CDS | 25.0% |
| AAGAGCAAGAACCATAAAAA+GGG | + | chr1.3:55571081-55571100 | MS.gene07505:CDS | 30.0% | |
| AATCAGATCATGTTCAAGTA+AGG | + | chr1.3:55569580-55569599 | MS.gene07505:intron | 30.0% | |
| AATTCCATGTTGATGTTTAG+TGG | - | chr1.3:55569099-55569118 | None:intergenic | 30.0% | |
| ACAGAACACATAACAATAAG+AGG | + | chr1.3:55569219-55569238 | MS.gene07505:CDS | 30.0% | |
| ACTAACATGAAGGGTTTATA+TGG | + | chr1.3:55570958-55570977 | MS.gene07505:CDS | 30.0% | |
| CAACAAAGCAAACAACAAAA+AGG | - | chr1.3:55569963-55569982 | None:intergenic | 30.0% | |
| CTAAACATCAACATGGAATT+TGG | + | chr1.3:55569099-55569118 | MS.gene07505:CDS | 30.0% | |
| CTTAGAAGAAACTAACATGA+AGG | + | chr1.3:55570948-55570967 | MS.gene07505:CDS | 30.0% | |
| GAAGAGATGTTTATAGTACT+TGG | - | chr1.3:55570458-55570477 | None:intergenic | 30.0% | |
| GAAGGGTTTATATGGTTATA+AGG | + | chr1.3:55570966-55570985 | MS.gene07505:CDS | 30.0% | |
| GGAATTTGGAGAGAAAAAAA+TGG | + | chr1.3:55569113-55569132 | MS.gene07505:CDS | 30.0% | |
| GTAACAAATTTCATGCAGAT+AGG | - | chr1.3:55572124-55572143 | None:intergenic | 30.0% | |
| GTTCTCAAAAAAATGAACTC+TGG | - | chr1.3:55569767-55569786 | None:intergenic | 30.0% | |
| TAATCCAATCTGATGAACAT+TGG | + | chr1.3:55569196-55569215 | MS.gene07505:CDS | 30.0% | |
| TCAAAAAAATGAACTCTGGT+TGG | - | chr1.3:55569763-55569782 | None:intergenic | 30.0% | |
| TTAATCAGAACATGGAAGAA+AGG | + | chr1.3:55569151-55569170 | MS.gene07505:CDS | 30.0% | |
| TTCTGTAAATTAGCGCATAA+GGG | - | chr1.3:55571754-55571773 | None:intergenic | 30.0% | |
| TTGTTTGTGAGTATGATGAT+TGG | + | chr1.3:55569243-55569262 | MS.gene07505:CDS | 30.0% | |
| TTTCTGTAAATTAGCGCATA+AGG | - | chr1.3:55571755-55571774 | None:intergenic | 30.0% | |
| ! | AAAGGAGTCCAAAGTATTAT+AGG | - | chr1.3:55570024-55570043 | None:intergenic | 30.0% |
| ! | AGAATGTTTGAGCTTGTTTA+AGG | - | chr1.3:55571259-55571278 | None:intergenic | 30.0% |
| ! | ATCCATTTCCCAATCTTTTT+GGG | - | chr1.3:55571890-55571909 | None:intergenic | 30.0% |
| ! | CTTTTGTGTTTGTAAGAAGT+TGG | + | chr1.3:55569349-55569368 | MS.gene07505:CDS | 30.0% |
| ! | GATTTTTCACCCAAAAAGAT+TGG | + | chr1.3:55571878-55571897 | MS.gene07505:CDS | 30.0% |
| ! | TTCTTTAAGTGGTTTTTCTC+AGG | + | chr1.3:55570615-55570634 | MS.gene07505:CDS | 30.0% |
| ! | TTTTCGATCAGTTTCTTATG+GGG | + | chr1.3:55570591-55570610 | MS.gene07505:CDS | 30.0% |
| !! | TTGCAAAGCCATTTTGTTAA+CGG | - | chr1.3:55570284-55570303 | None:intergenic | 30.0% |
| !!! | ATTGCTTGCAACTTTGTTTT+GGG | + | chr1.3:55571819-55571838 | MS.gene07505:CDS | 30.0% |
| !!! | CTTTTTGTTGTTTGCTTTGT+TGG | + | chr1.3:55569961-55569980 | MS.gene07505:CDS | 30.0% |
| AACAGCACAAGTCTGAATAA+TGG | - | chr1.3:55569433-55569452 | None:intergenic | 35.0% | |
| AAGTCCACTAAACATCAACA+TGG | + | chr1.3:55569092-55569111 | MS.gene07505:CDS | 35.0% | |
| ACAAATTTCATGCAGATAGG+CGG | - | chr1.3:55572121-55572140 | None:intergenic | 35.0% | |
| ACAAGCTCAAACATTCTTGA+AGG | + | chr1.3:55571262-55571281 | MS.gene07505:CDS | 35.0% | |
| ACAGAAACATGGCAGTTATA+GGG | + | chr1.3:55571768-55571787 | MS.gene07505:CDS | 35.0% | |
| ATCATCAGCAGCTAATTCTA+AGG | - | chr1.3:55571213-55571232 | None:intergenic | 35.0% | |
| ATTACTTCAGCTCCTATAAC+TGG | - | chr1.3:55569180-55569199 | None:intergenic | 35.0% | |
| ATTGCTTCTGGACTAATTTG+CGG | + | chr1.3:55572043-55572062 | MS.gene07505:CDS | 35.0% | |
| ATTTCAGGAAGCAAGTACAT+GGG | + | chr1.3:55570556-55570575 | MS.gene07505:intron | 35.0% | |
| CAAGAGCAAGAACCATAAAA+AGG | + | chr1.3:55571080-55571099 | MS.gene07505:CDS | 35.0% | |
| CACTTGGATAAGGTAAATTG+AGG | - | chr1.3:55570381-55570400 | None:intergenic | 35.0% | |
| CATATCTGTTGGGATTAAAC+AGG | + | chr1.3:55569851-55569870 | MS.gene07505:CDS | 35.0% | |
| CTATCAATTGCTCTAATCCT+TGG | + | chr1.3:55570994-55571013 | MS.gene07505:CDS | 35.0% | |
| CTCAATTTACCTTATCCAAG+TGG | + | chr1.3:55570379-55570398 | MS.gene07505:CDS | 35.0% | |
| GACAGTTGAAACTAGAATCT+TGG | - | chr1.3:55571040-55571059 | None:intergenic | 35.0% | |
| GTCCTTGATTTCTAACGAAA+CGG | - | chr1.3:55569536-55569555 | None:intergenic | 35.0% | |
| TACAGAAACATGGCAGTTAT+AGG | + | chr1.3:55571767-55571786 | MS.gene07505:CDS | 35.0% | |
| TATTTCAGGAAGCAAGTACA+TGG | + | chr1.3:55570555-55570574 | MS.gene07505:intron | 35.0% | |
| TCACACACAGGATGATAAAA+TGG | + | chr1.3:55570432-55570451 | MS.gene07505:CDS | 35.0% | |
| TCGTTAACGAGATTCAACTA+AGG | + | chr1.3:55569644-55569663 | MS.gene07505:intron | 35.0% | |
| TCGTTAACGATTGAAGTATG+AGG | - | chr1.3:55569634-55569653 | None:intergenic | 35.0% | |
| TCTCATTAAATCCGTGATCT+CGG | + | chr1.3:55571553-55571572 | MS.gene07505:CDS | 35.0% | |
| TCTGTAAATTAGCGCATAAG+GGG | - | chr1.3:55571753-55571772 | None:intergenic | 35.0% | |
| TCTTATGGGGTTTCTTTAAG+TGG | + | chr1.3:55570604-55570623 | MS.gene07505:CDS | 35.0% | |
| TGCGCTAATTTACAGAAACA+TGG | + | chr1.3:55571757-55571776 | MS.gene07505:CDS | 35.0% | |
| TGTCTTAATTCCACTCAGAA+AGG | + | chr1.3:55569990-55570009 | MS.gene07505:CDS | 35.0% | |
| TTAAAGAACCTGCATTTGGT+TGG | + | chr1.3:55569926-55569945 | MS.gene07505:CDS | 35.0% | |
| TTCCGTTTCGTTAGAAATCA+AGG | + | chr1.3:55569531-55569550 | MS.gene07505:intron | 35.0% | |
| TTCGTTAGAAATCAAGGACA+CGG | + | chr1.3:55569537-55569556 | MS.gene07505:intron | 35.0% | |
| TTTGAACAGTTTCCAACCTT+TGG | + | chr1.3:55570654-55570673 | MS.gene07505:CDS | 35.0% | |
| TTTGCAATTGATATGTGCAC+AGG | + | chr1.3:55571956-55571975 | MS.gene07505:CDS | 35.0% | |
| ! | ACTAAAGTGCTTGAAAAAGC+TGG | + | chr1.3:55569372-55569391 | MS.gene07505:CDS | 35.0% |
| ! | AGGATTTGCTTCATATCTGT+TGG | + | chr1.3:55569840-55569859 | MS.gene07505:CDS | 35.0% |
| ! | CATCCATTTCCCAATCTTTT+TGG | - | chr1.3:55571891-55571910 | None:intergenic | 35.0% |
| ! | GGATTTGCTTCATATCTGTT+GGG | + | chr1.3:55569841-55569860 | MS.gene07505:CDS | 35.0% |
| ! | TTATGTATCCGCTTGTTGAT+CGG | + | chr1.3:55570899-55570918 | MS.gene07505:CDS | 35.0% |
| ! | TTCTACAAGGCATTTGATGT+GGG | + | chr1.3:55571704-55571723 | MS.gene07505:CDS | 35.0% |
| !! | ATTCTAGTTTCAACTGTCCT+TGG | + | chr1.3:55571042-55571061 | MS.gene07505:CDS | 35.0% |
| !! | CATTGCTTGCAACTTTGTTT+TGG | + | chr1.3:55571818-55571837 | MS.gene07505:CDS | 35.0% |
| !! | GATTTTAGCACGACTTTTGT+GGG | + | chr1.3:55570808-55570827 | MS.gene07505:CDS | 35.0% |
| !! | TGCAAAGCCATTTTGTTAAC+GGG | - | chr1.3:55570283-55570302 | None:intergenic | 35.0% |
| !! | TTGATGTTTAGTGGACTTGA+TGG | - | chr1.3:55569090-55569109 | None:intergenic | 35.0% |
| !!! | GAAAGTTGCACTATTTTTGC+TGG | + | chr1.3:55571478-55571497 | MS.gene07505:CDS | 35.0% |
| AACCATCAACTCTGCTTTCT+TGG | - | chr1.3:55572017-55572036 | None:intergenic | 40.0% | |
| AAGTATATACGCCATCACCA+AGG | - | chr1.3:55571014-55571033 | None:intergenic | 40.0% | |
| ACATAGTACCATTTCAGCTG+AGG | - | chr1.3:55571368-55571387 | None:intergenic | 40.0% | |
| ACTGTGACAGGAAAAGAGAA+TGG | + | chr1.3:55571503-55571522 | MS.gene07505:CDS | 40.0% | |
| AGGAAAAGAGAATGGTGTAG+TGG | + | chr1.3:55571511-55571530 | MS.gene07505:CDS | 40.0% | |
| AGGAAGACATATGTGTTGTC+TGG | + | chr1.3:55569871-55569890 | MS.gene07505:CDS | 40.0% | |
| AGGTCTCACCGATATAAACA+TGG | + | chr1.3:55571442-55571461 | MS.gene07505:CDS | 40.0% | |
| ATACTTAACCAATGCTCCTG+GGG | - | chr1.3:55570142-55570161 | None:intergenic | 40.0% | |
| ATGAAGCTGAACCTTACAAC+AGG | + | chr1.3:55569288-55569307 | MS.gene07505:CDS | 40.0% | |
| ATGTTCGTATGCCAAGTAGT+TGG | + | chr1.3:55571638-55571657 | MS.gene07505:CDS | 40.0% | |
| ATTAGTCCAGAAGCAATTGC+TGG | - | chr1.3:55572040-55572059 | None:intergenic | 40.0% | |
| ATTGCTCTAATCCTTGGTGA+TGG | + | chr1.3:55571000-55571019 | MS.gene07505:CDS | 40.0% | |
| CACCCAAAAAGATTGGGAAA+TGG | + | chr1.3:55571885-55571904 | MS.gene07505:CDS | 40.0% | |
| CAGAAACATGGCAGTTATAG+GGG | + | chr1.3:55571769-55571788 | MS.gene07505:CDS | 40.0% | |
| CATCAAATGCCTTGTAGAAC+AGG | - | chr1.3:55571703-55571722 | None:intergenic | 40.0% | |
| CTGTCCAATGTTCATCAGAT+TGG | - | chr1.3:55569203-55569222 | None:intergenic | 40.0% | |
| CTTGCACATTCTTCTTATGC+AGG | + | chr1.3:55570342-55570361 | MS.gene07505:intron | 40.0% | |
| GAAGAAAGGTTGCCAGTTAT+AGG | + | chr1.3:55569165-55569184 | MS.gene07505:CDS | 40.0% | |
| GATACTTAACCAATGCTCCT+GGG | - | chr1.3:55570143-55570162 | None:intergenic | 40.0% | |
| GCAGCAGAGACATTCAAATT+TGG | - | chr1.3:55569321-55569340 | None:intergenic | 40.0% | |
| GCAGTTAAAGAACCTGCATT+TGG | + | chr1.3:55569922-55569941 | MS.gene07505:CDS | 40.0% | |
| GTTGCAAAACCACTTGGATA+AGG | - | chr1.3:55570391-55570410 | None:intergenic | 40.0% | |
| TGATATGTGCACAGGTAGTT+TGG | + | chr1.3:55571964-55571983 | MS.gene07505:CDS | 40.0% | |
| TGATTCTTTCATGTACGCCA+AGG | - | chr1.3:55571062-55571081 | None:intergenic | 40.0% | |
| TTAGCTGCTGATGATATGCA+CGG | + | chr1.3:55571218-55571237 | MS.gene07505:CDS | 40.0% | |
| TTGATCGGCGTAAAGGAAAT+TGG | + | chr1.3:55570914-55570933 | MS.gene07505:CDS | 40.0% | |
| TTGGAACCATTCCTGTTGTA+AGG | - | chr1.3:55569302-55569321 | None:intergenic | 40.0% | |
| TTTGATGTGGGAAATCCACA+TGG | + | chr1.3:55571716-55571735 | MS.gene07505:CDS | 40.0% | |
| ! | ACATATGTGTTGTCTGGAGT+AGG | + | chr1.3:55569877-55569896 | MS.gene07505:CDS | 40.0% |
| ! | CATCAATGGTTTTCACACAC+AGG | + | chr1.3:55570420-55570439 | MS.gene07505:CDS | 40.0% |
| ! | GCTTGTTTAAGGTCACCATT+TGG | - | chr1.3:55571248-55571267 | None:intergenic | 40.0% |
| ! | GTATTTTCTTGGCGAGTGAA+TGG | - | chr1.3:55569411-55569430 | None:intergenic | 40.0% |
| ! | GTTCTACAAGGCATTTGATG+TGG | + | chr1.3:55571703-55571722 | MS.gene07505:CDS | 40.0% |
| ! | TGCTATAGCATTGCTGTTAG+CGG | + | chr1.3:55569456-55569475 | MS.gene07505:CDS | 40.0% |
| ! | TTGCTTCTGGACTAATTTGC+GGG | + | chr1.3:55572044-55572063 | MS.gene07505:CDS | 40.0% |
| !! | CGATTTTAGCACGACTTTTG+TGG | + | chr1.3:55570807-55570826 | MS.gene07505:CDS | 40.0% |
| !! | GGGTTCTTTGCTTTTGCAAT+AGG | + | chr1.3:55571839-55571858 | MS.gene07505:CDS | 40.0% |
| AAGTAGTTGGCACTGCAATG+GGG | + | chr1.3:55571651-55571670 | MS.gene07505:CDS | 45.0% | |
| AAGTATGCCCCTACCAGAAA+CGG | - | chr1.3:55571938-55571957 | None:intergenic | 45.0% | |
| AGAATGTTAAACAGTGCCCC+AGG | + | chr1.3:55570123-55570142 | MS.gene07505:intron | 45.0% | |
| ATGGCAGTTATAGGGGTTCA+AGG | + | chr1.3:55571776-55571795 | MS.gene07505:CDS | 45.0% | |
| ATGGTTCCAGCAATTGCTTC+TGG | + | chr1.3:55572031-55572050 | MS.gene07505:CDS | 45.0% | |
| ATTCCTTAACGAGTGCCCTA+GGG | + | chr1.3:55570254-55570273 | MS.gene07505:intron | 45.0% | |
| ATTGCAAGACACCGAGATCA+CGG | - | chr1.3:55571567-55571586 | None:intergenic | 45.0% | |
| CAAAGTTGCAAGCAATGTCG+AGG | - | chr1.3:55571815-55571834 | None:intergenic | 45.0% | |
| CAACCTTTGGATTGCAAGCT+TGG | + | chr1.3:55570667-55570686 | MS.gene07505:CDS | 45.0% | |
| CAAGCTTGCAATCCAAAGGT+TGG | - | chr1.3:55570669-55570688 | None:intergenic | 45.0% | |
| CAAGTAGTTGGCACTGCAAT+GGG | + | chr1.3:55571650-55571669 | MS.gene07505:CDS | 45.0% | |
| CAGAGACAAGTTCACAAGGT+GGG | - | chr1.3:55570851-55570870 | None:intergenic | 45.0% | |
| CAGGTTCTTTAACTGCGCTT+GGG | - | chr1.3:55569918-55569937 | None:intergenic | 45.0% | |
| CTCCAAGAAAGCAGAGTTGA+TGG | + | chr1.3:55572012-55572031 | MS.gene07505:CDS | 45.0% | |
| CTTCCAAGCTTGCAATCCAA+AGG | - | chr1.3:55570673-55570692 | None:intergenic | 45.0% | |
| GAAATGGATGCCATTACCGA+TGG | + | chr1.3:55571901-55571920 | MS.gene07505:CDS | 45.0% | |
| GAGCTTCTTCCTGTTCTACA+AGG | + | chr1.3:55571691-55571710 | MS.gene07505:CDS | 45.0% | |
| GATATGCACGGGAATCCAAA+TGG | + | chr1.3:55571230-55571249 | MS.gene07505:CDS | 45.0% | |
| GCATGTTTCCTCAGCTGAAA+TGG | + | chr1.3:55571357-55571376 | MS.gene07505:CDS | 45.0% | |
| GCTGAACCTTACAACAGGAA+TGG | + | chr1.3:55569293-55569312 | MS.gene07505:CDS | 45.0% | |
| GGACTACAAACCTTTCTGAG+TGG | - | chr1.3:55570003-55570022 | None:intergenic | 45.0% | |
| GGATACTTAACCAATGCTCC+TGG | - | chr1.3:55570144-55570163 | None:intergenic | 45.0% | |
| TAATCCAGAGTTCGGGTAGA+AGG | - | chr1.3:55569740-55569759 | None:intergenic | 45.0% | |
| TAGAACAGGAAGAAGCTCAG+AGG | - | chr1.3:55571689-55571708 | None:intergenic | 45.0% | |
| TAGCTGCTGATGATATGCAC+GGG | + | chr1.3:55571219-55571238 | MS.gene07505:CDS | 45.0% | |
| TTCTCAGGCAAAGAAGACTG+TGG | + | chr1.3:55570630-55570649 | MS.gene07505:CDS | 45.0% | |
| TTTGCGCTTGTGTGTGTTGT+AGG | + | chr1.3:55569817-55569836 | MS.gene07505:intron | 45.0% | |
| ! | AGAGCATTCCAATGTGGATC+GGG | + | chr1.3:55571285-55571304 | MS.gene07505:CDS | 45.0% |
| ! | CTCGCATTCTGCAATGCTTT+TGG | + | chr1.3:55571416-55571435 | MS.gene07505:CDS | 45.0% |
| ! | TAGCATTGCTGTTAGCGGTA+AGG | + | chr1.3:55569461-55569480 | MS.gene07505:intron | 45.0% |
| ! | TGCTTCTGGACTAATTTGCG+GGG | + | chr1.3:55572045-55572064 | MS.gene07505:CDS | 45.0% |
| ! | TTTTTGCTGGCAACTGTGAC+AGG | + | chr1.3:55571491-55571510 | MS.gene07505:CDS | 45.0% |
| !! | CTGGTTGGTAATCCAGAGTT+CGG | - | chr1.3:55569748-55569767 | None:intergenic | 45.0% |
| !! | GAGAGCATTCCAATGTGGAT+CGG | + | chr1.3:55571284-55571303 | MS.gene07505:CDS | 45.0% |
| !! | TCCAAGTGGTTTTGCAACAG+CGG | + | chr1.3:55570393-55570412 | MS.gene07505:CDS | 45.0% |
| !! | TGAAGGAGAGCATTCCAATG+TGG | + | chr1.3:55571279-55571298 | MS.gene07505:CDS | 45.0% |
| !! | TGGTTGGTAATCCAGAGTTC+GGG | - | chr1.3:55569747-55569766 | None:intergenic | 45.0% |
| !!! | TTCTGCAATGCTTTTGGAGC+AGG | + | chr1.3:55571422-55571441 | MS.gene07505:CDS | 45.0% |
| !! | ATAATACTAATATTAATATA+TGG | + | chr1.3:55571157-55571176 | MS.gene07505:intron | 5.0% |
| !! | TAATACTAATATTAATATAT+GGG | + | chr1.3:55571158-55571177 | MS.gene07505:intron | 5.0% |
| ACCGCTGTTGCAAAACCACT+TGG | - | chr1.3:55570397-55570416 | None:intergenic | 50.0% | |
| CCAAGTAGTTGGCACTGCAA+TGG | + | chr1.3:55571649-55571668 | MS.gene07505:CDS | 50.0% | |
| CCAGACATCCAACCAAATGC+AGG | - | chr1.3:55569937-55569956 | None:intergenic | 50.0% | |
| CCATTGCAGTGCCAACTACT+TGG | - | chr1.3:55571652-55571671 | None:intergenic | 50.0% | |
| CCTGCATTTGGTTGGATGTC+TGG | + | chr1.3:55569934-55569953 | MS.gene07505:CDS | 50.0% | |
| CCTTTACGCCGATCAACAAG+CGG | - | chr1.3:55570910-55570929 | None:intergenic | 50.0% | |
| CTTACCTTCTACCCGAACTC+TGG | + | chr1.3:55569733-55569752 | MS.gene07505:intron | 50.0% | |
| CTTGGAGCTGTGCTCTCTTA+TGG | + | chr1.3:55570874-55570893 | MS.gene07505:CDS | 50.0% | |
| GAGCATTCCAATGTGGATCG+GGG | + | chr1.3:55571286-55571305 | MS.gene07505:CDS | 50.0% | |
| GATGCCATTACCGATGGTCA+TGG | + | chr1.3:55571907-55571926 | MS.gene07505:CDS | 50.0% | |
| GATTCCTTAACGAGTGCCCT+AGG | + | chr1.3:55570253-55570272 | MS.gene07505:intron | 50.0% | |
| GCAACAGCGGTTCTCATCAA+TGG | + | chr1.3:55570406-55570425 | MS.gene07505:CDS | 50.0% | |
| GCAGAGACAAGTTCACAAGG+TGG | - | chr1.3:55570852-55570871 | None:intergenic | 50.0% | |
| GCAGGTTCTTTAACTGCGCT+TGG | - | chr1.3:55569919-55569938 | None:intergenic | 50.0% | |
| GCATTGCAGAATGCGAGAGA+TGG | - | chr1.3:55571413-55571432 | None:intergenic | 50.0% | |
| GCTAGAGCAAGAATAGCAGC+AGG | - | chr1.3:55572088-55572107 | None:intergenic | 50.0% | |
| GGAGCAGAGACAAGTTCACA+AGG | - | chr1.3:55570855-55570874 | None:intergenic | 50.0% | |
| GTGAACTTGTCTCTGCTCCT+TGG | + | chr1.3:55570856-55570875 | MS.gene07505:CDS | 50.0% | |
| GTGTAGTGGCAGCACTTGTT+GGG | + | chr1.3:55571525-55571544 | MS.gene07505:CDS | 50.0% | |
| TTCAGCTGAGGAAACATGCG+CGG | - | chr1.3:55571356-55571375 | None:intergenic | 50.0% | |
| TTCCTTAACGAGTGCCCTAG+GGG | + | chr1.3:55570255-55570274 | MS.gene07505:intron | 50.0% | |
| ! | CATAAGAGAGCACAGCTCCA+AGG | - | chr1.3:55570876-55570895 | None:intergenic | 50.0% |
| ! | TAATTTGCGGGGAAGGACTG+TGG | + | chr1.3:55572056-55572075 | MS.gene07505:CDS | 50.0% |
| ! | TCTGGACTAATTTGCGGGGA+AGG | + | chr1.3:55572049-55572068 | MS.gene07505:CDS | 50.0% |
| ! | TTTGTTAACGGGTGCCCCTA+GGG | - | chr1.3:55570272-55570291 | None:intergenic | 50.0% |
| !! | AGGGGCACCCGTTAACAAAA+TGG | + | chr1.3:55570273-55570292 | MS.gene07505:intron | 50.0% |
| !! | GGGGCTTTGAATTCTCCATG+TGG | - | chr1.3:55571734-55571753 | None:intergenic | 50.0% |
| !! | TTGTCTGGAGTAGGCACTGA+GGG | + | chr1.3:55569886-55569905 | MS.gene07505:CDS | 50.0% |
| !! | TTTTGTTAACGGGTGCCCCT+AGG | - | chr1.3:55570273-55570292 | None:intergenic | 50.0% |
| AACGGTACGGCCATGACCAT+CGG | - | chr1.3:55571920-55571939 | None:intergenic | 55.0% | |
| ACGGCCATGACCATCGGTAA+TGG | - | chr1.3:55571914-55571933 | None:intergenic | 55.0% | |
| CATTCCAATGTGGATCGGGG+TGG | + | chr1.3:55571289-55571308 | MS.gene07505:CDS | 55.0% | |
| GCGCTTGTGTGTGTTGTAGG+AGG | + | chr1.3:55569820-55569839 | MS.gene07505:intron | 55.0% | |
| GGTGTAGTGGCAGCACTTGT+TGG | + | chr1.3:55571524-55571543 | MS.gene07505:CDS | 55.0% | |
| TCAGCTGAGGAAACATGCGC+GGG | - | chr1.3:55571355-55571374 | None:intergenic | 55.0% | |
| TGCCCCTACCAGAAACGGTA+CGG | - | chr1.3:55571933-55571952 | None:intergenic | 55.0% | |
| TGGATCGGGGTGGTTGGATA+TGG | + | chr1.3:55571299-55571318 | MS.gene07505:CDS | 55.0% | |
| TGGCATACGAACATCGCCCT+GGG | - | chr1.3:55571632-55571651 | None:intergenic | 55.0% | |
| TTGGCATACGAACATCGCCC+TGG | - | chr1.3:55571633-55571652 | None:intergenic | 55.0% | |
| ! | AAACAGTGCCCCAGGAGCAT+TGG | + | chr1.3:55570131-55570150 | MS.gene07505:intron | 55.0% |
| ! | AGCACGACTTTTGTGGGAGC+AGG | + | chr1.3:55570814-55570833 | MS.gene07505:CDS | 55.0% |
| ! | CCGCTTGTTGATCGGCGTAA+AGG | + | chr1.3:55570907-55570926 | MS.gene07505:CDS | 55.0% |
| ! | GTTGTCTGGAGTAGGCACTG+AGG | + | chr1.3:55569885-55569904 | MS.gene07505:CDS | 55.0% |
| !! | ATGGCCGTACCGTTTCTGGT+AGG | + | chr1.3:55571926-55571945 | MS.gene07505:CDS | 55.0% |
| !! | TGGCCGTACCGTTTCTGGTA+GGG | + | chr1.3:55571927-55571946 | MS.gene07505:CDS | 55.0% |
| ATTGCACACGCACCTCTCCC+AGG | + | chr1.3:55571612-55571631 | MS.gene07505:CDS | 60.0% | |
| CCAACCACCCCGATCCACAT+TGG | - | chr1.3:55571296-55571315 | None:intergenic | 60.0% | |
| CCAATGTGGATCGGGGTGGT+TGG | + | chr1.3:55571293-55571312 | MS.gene07505:CDS | 60.0% | |
| GGTCATGGCCGTACCGTTTC+TGG | + | chr1.3:55571922-55571941 | MS.gene07505:CDS | 60.0% | |
| TACGAACATCGCCCTGGGAG+AGG | - | chr1.3:55571627-55571646 | None:intergenic | 60.0% | |
| TTGCACACGCACCTCTCCCA+GGG | + | chr1.3:55571613-55571632 | MS.gene07505:CDS | 60.0% | |
| ! | GTGGCAGCACTTGTTGGGTG+TGG | + | chr1.3:55571530-55571549 | MS.gene07505:CDS | 60.0% |
| ! | TGCCCCTAGGGCACTCGTTA+AGG | - | chr1.3:55570260-55570279 | None:intergenic | 60.0% |
| !! | GGCCGTACCGTTTCTGGTAG+GGG | + | chr1.3:55571928-55571947 | MS.gene07505:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 55569078 | 55572150 | 55569078 | ID=MS.gene07505 |
| chr1.3 | mRNA | 55569078 | 55572150 | 55569078 | ID=MS.gene07505.t1;Parent=MS.gene07505 |
| chr1.3 | exon | 55569078 | 55569477 | 55569078 | ID=MS.gene07505.t1.exon1;Parent=MS.gene07505.t1 |
| chr1.3 | CDS | 55569078 | 55569477 | 55569078 | ID=cds.MS.gene07505.t1;Parent=MS.gene07505.t1 |
| chr1.3 | exon | 55569839 | 55570011 | 55569839 | ID=MS.gene07505.t1.exon2;Parent=MS.gene07505.t1 |
| chr1.3 | CDS | 55569839 | 55570011 | 55569839 | ID=cds.MS.gene07505.t1;Parent=MS.gene07505.t1 |
| chr1.3 | exon | 55570364 | 55570458 | 55570364 | ID=MS.gene07505.t1.exon3;Parent=MS.gene07505.t1 |
| chr1.3 | CDS | 55570364 | 55570458 | 55570364 | ID=cds.MS.gene07505.t1;Parent=MS.gene07505.t1 |
| chr1.3 | exon | 55570563 | 55570697 | 55570563 | ID=MS.gene07505.t1.exon4;Parent=MS.gene07505.t1 |
| chr1.3 | CDS | 55570563 | 55570697 | 55570563 | ID=cds.MS.gene07505.t1;Parent=MS.gene07505.t1 |
| chr1.3 | exon | 55570798 | 55571102 | 55570798 | ID=MS.gene07505.t1.exon5;Parent=MS.gene07505.t1 |
| chr1.3 | CDS | 55570798 | 55571102 | 55570798 | ID=cds.MS.gene07505.t1;Parent=MS.gene07505.t1 |
| chr1.3 | exon | 55571216 | 55572150 | 55571216 | ID=MS.gene07505.t1.exon6;Parent=MS.gene07505.t1 |
| chr1.3 | CDS | 55571216 | 55572150 | 55571216 | ID=cds.MS.gene07505.t1;Parent=MS.gene07505.t1 |
| Gene Sequence |
| Protein sequence |
