Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057201.t1 | XP_024635978.1 | 97.7 | 656 | 14 | 1 | 14 | 669 | 1 | 655 | 0.00E+00 | 1275.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057201.t1 | Q2EF88 | 76.7 | 652 | 148 | 3 | 19 | 669 | 12 | 660 | 5.3e-292 | 1004.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057201.t1 | G7J868 | 97.7 | 656 | 14 | 1 | 14 | 669 | 1 | 655 | 0.0e+00 | 1275.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057201 | MS.gene06650 | 0.923451 | 2.61E-89 | -1.69E-46 |
| MS.gene057201 | MS.gene06864 | 0.933411 | 1.95E-95 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene057201 | MS.gene004968 | PPI |
| MS.gene07505 | MS.gene057201 | PPI |
| MS.gene86821 | MS.gene057201 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057201.t1 | MTR_3g092090 | 97.565 | 657 | 15 | 1 | 14 | 670 | 1 | 656 | 0.0 | 1311 |
| MS.gene057201.t1 | MTR_3g092090 | 97.710 | 655 | 14 | 1 | 14 | 668 | 1 | 654 | 0.0 | 1310 |
| MS.gene057201.t1 | MTR_1g007580 | 75.000 | 664 | 157 | 5 | 14 | 670 | 1 | 662 | 0.0 | 1023 |
| MS.gene057201.t1 | MTR_0312s0020 | 74.355 | 659 | 162 | 5 | 18 | 670 | 5 | 662 | 0.0 | 1004 |
| MS.gene057201.t1 | MTR_1g007540 | 74.355 | 659 | 162 | 5 | 18 | 670 | 5 | 662 | 0.0 | 1004 |
| MS.gene057201.t1 | MTR_1g077840 | 64.804 | 662 | 217 | 4 | 17 | 670 | 17 | 670 | 0.0 | 900 |
| MS.gene057201.t1 | MTR_7g028250 | 53.797 | 632 | 286 | 2 | 45 | 670 | 35 | 666 | 0.0 | 748 |
| MS.gene057201.t1 | MTR_5g091600 | 55.572 | 664 | 284 | 6 | 14 | 670 | 1 | 660 | 0.0 | 744 |
| MS.gene057201.t1 | MTR_6g077870 | 52.496 | 661 | 296 | 7 | 21 | 670 | 37 | 690 | 0.0 | 727 |
| MS.gene057201.t1 | MTR_3g063490 | 54.074 | 675 | 291 | 7 | 3 | 670 | 12 | 674 | 0.0 | 723 |
| MS.gene057201.t1 | MTR_3g063520 | 54.030 | 670 | 287 | 6 | 19 | 670 | 2 | 668 | 0.0 | 706 |
| MS.gene057201.t1 | MTR_6g077870 | 54.735 | 528 | 225 | 5 | 154 | 670 | 5 | 529 | 0.0 | 600 |
| MS.gene057201.t1 | MTR_1626s0010 | 71.064 | 235 | 66 | 1 | 226 | 458 | 1 | 235 | 1.75e-119 | 356 |
| MS.gene057201.t1 | MTR_0312s0050 | 71.074 | 121 | 30 | 2 | 14 | 130 | 1 | 120 | 1.65e-47 | 163 |
| MS.gene057201.t1 | MTR_5g091615 | 60.417 | 144 | 56 | 1 | 528 | 670 | 57 | 200 | 3.61e-47 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057201.t1 | AT5G53550 | 75.988 | 658 | 156 | 2 | 14 | 670 | 5 | 661 | 0.0 | 1033 |
| MS.gene057201.t1 | AT5G53550 | 75.988 | 658 | 156 | 2 | 14 | 670 | 5 | 661 | 0.0 | 1033 |
| MS.gene057201.t1 | AT5G53550 | 75.988 | 658 | 156 | 2 | 14 | 670 | 5 | 661 | 0.0 | 1033 |
| MS.gene057201.t1 | AT5G53550 | 75.988 | 658 | 156 | 2 | 14 | 670 | 5 | 661 | 0.0 | 1033 |
| MS.gene057201.t1 | AT5G53550 | 75.988 | 658 | 156 | 2 | 14 | 670 | 5 | 661 | 0.0 | 1033 |
| MS.gene057201.t1 | AT5G24380 | 71.756 | 655 | 174 | 5 | 25 | 670 | 1 | 653 | 0.0 | 985 |
| MS.gene057201.t1 | AT4G24120 | 64.438 | 658 | 226 | 4 | 17 | 670 | 10 | 663 | 0.0 | 903 |
| MS.gene057201.t1 | AT5G53550 | 77.956 | 499 | 110 | 0 | 172 | 670 | 1 | 499 | 0.0 | 813 |
| MS.gene057201.t1 | AT1G65730 | 57.744 | 665 | 266 | 8 | 17 | 670 | 5 | 665 | 0.0 | 781 |
| MS.gene057201.t1 | AT5G41000 | 53.718 | 659 | 295 | 4 | 22 | 670 | 2 | 660 | 0.0 | 749 |
| MS.gene057201.t1 | AT3G27020 | 51.735 | 663 | 307 | 5 | 16 | 670 | 6 | 663 | 0.0 | 727 |
| MS.gene057201.t1 | AT5G41000 | 52.221 | 653 | 289 | 4 | 22 | 670 | 2 | 635 | 0.0 | 709 |
| MS.gene057201.t1 | AT1G48370 | 51.937 | 697 | 284 | 5 | 20 | 670 | 9 | 700 | 0.0 | 694 |
| MS.gene057201.t1 | AT3G17650 | 54.969 | 644 | 271 | 6 | 41 | 670 | 52 | 690 | 0.0 | 692 |
| MS.gene057201.t1 | AT3G17650 | 54.969 | 644 | 271 | 6 | 41 | 670 | 52 | 690 | 0.0 | 692 |
| MS.gene057201.t1 | AT1G48370 | 55.744 | 531 | 220 | 3 | 155 | 670 | 7 | 537 | 0.0 | 568 |
| MS.gene057201.t1 | AT5G41000 | 54.545 | 484 | 213 | 3 | 194 | 670 | 1 | 484 | 0.0 | 559 |
| MS.gene057201.t1 | AT5G45450 | 54.545 | 198 | 83 | 2 | 474 | 670 | 1 | 192 | 4.38e-62 | 206 |
Find 151 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATAGAAACATGGCAATTT+TGG | 0.087728 | 3.2:+77538995 | MS.gene057201:CDS |
| CTTTCTTCTTCATTGCTTCT+AGG | 0.098551 | 3.2:-77536179 | None:intergenic |
| GCTACTGCTGTTCTTATTAA+TGG | 0.102732 | 3.2:+77537553 | MS.gene057201:CDS |
| CATCAAGAGGCAACGGTTTC+TGG | 0.144768 | 3.2:-77538461 | None:intergenic |
| ATTTCCATTGCCTTGATTCT+TGG | 0.193274 | 3.2:+77538221 | MS.gene057201:CDS |
| TTTGTTCAATTTCCTACTTT+TGG | 0.201094 | 3.2:+77537796 | MS.gene057201:CDS |
| ATTTGCTATAGTAGCTAATT+TGG | 0.203777 | 3.2:+77539079 | MS.gene057201:CDS |
| ATCCATTCTCGCTTTGTTAA+AGG | 0.211152 | 3.2:+77539319 | MS.gene057201:CDS |
| TTCTTGGTGCTGTGGTTTCT+TGG | 0.236646 | 3.2:+77538015 | MS.gene057201:CDS |
| GTGATAATTGTAGGTGGTTT+TGG | 0.241603 | 3.2:+77537049 | MS.gene057201:intron |
| ATGGTTCCTGCAGTTGCTTC+TGG | 0.250260 | 3.2:+77539260 | MS.gene057201:CDS |
| GTTAATTTATCATTACTTCT+TGG | 0.262551 | 3.2:+77537999 | MS.gene057201:CDS |
| CTCGGCTTCTGCAATGCTTA+TGG | 0.273052 | 3.2:+77538645 | MS.gene057201:CDS |
| AGCTACTTTCCCGTAGTTAT+AGG | 0.273083 | 3.2:-77538694 | None:intergenic |
| AGGCAACGGTTTCTGGTTAC+TGG | 0.282115 | 3.2:-77538454 | None:intergenic |
| AGACTCCTCATGCTACTTTC+TGG | 0.288803 | 3.2:-77538095 | None:intergenic |
| AAATATTACTACCTTTCTAA+TGG | 0.292121 | 3.2:-77537224 | None:intergenic |
| CTAGGTAGAATGTTCGGATT+TGG | 0.292172 | 3.2:+77539375 | MS.gene057201:intron |
| TCTTGGTGCTGTGGTTTCTT+GGG | 0.298595 | 3.2:+77538016 | MS.gene057201:CDS |
| CAAGAGAAAACATTCCTATA+TGG | 0.305526 | 3.2:+77538508 | MS.gene057201:CDS |
| CTAATAGCTAGTCTTATAAT+TGG | 0.306234 | 3.2:+77536302 | MS.gene057201:CDS |
| TCACATCTCCTTTAGGAGTA+TGG | 0.316180 | 3.2:-77537579 | None:intergenic |
| GGTGTAGTTGCTGGACTTGT+AGG | 0.321187 | 3.2:+77538753 | MS.gene057201:CDS |
| TTTGTGCTTGCCGCCTTAGC+TGG | 0.321202 | 3.2:+77538720 | MS.gene057201:CDS |
| CTTACTTATTGGGGTTGAAT+AGG | 0.324163 | 3.2:+77537074 | MS.gene057201:CDS |
| AATATTACTACCTTTCTAAT+GGG | 0.327178 | 3.2:-77537223 | None:intergenic |
| AATGTTTCTGCTGCTCTACT+TGG | 0.337923 | 3.2:+77536386 | MS.gene057201:CDS |
| GCTAATTTGGTAAGAGATCT+TGG | 0.343946 | 3.2:+77539092 | MS.gene057201:CDS |
| TTTCCCAGGAAGCAGGTTCA+TGG | 0.348721 | 3.2:+77537697 | MS.gene057201:intron |
| TTGGCCATCACATCTCCTTT+AGG | 0.349476 | 3.2:-77537586 | None:intergenic |
| TGAAGAGGGTCAAGTGGCTT+TGG | 0.350110 | 3.2:+77536226 | MS.gene057201:CDS |
| CAGCAGAAACATTGAGATTA+GGG | 0.371403 | 3.2:-77536376 | None:intergenic |
| AGAATGTTCGGATTTGGATT+TGG | 0.378496 | 3.2:+77539381 | MS.gene057201:CDS |
| AGCTAAAAGTCCAACAAAAC+TGG | 0.385920 | 3.2:-77537194 | None:intergenic |
| CAAGCAATTGGAACAGCAAT+AGG | 0.388777 | 3.2:+77538879 | MS.gene057201:CDS |
| ATTGCCTTGATTCTTGGTGA+TGG | 0.390268 | 3.2:+77538227 | MS.gene057201:CDS |
| CCTTTAATCAAAGGACTAAA+AGG | 0.392672 | 3.2:+77538050 | MS.gene057201:CDS |
| ATGGCATATGCTGAACAAAA+AGG | 0.393790 | 3.2:+77539226 | MS.gene057201:CDS |
| GCAGCAGAAACATTGAGATT+AGG | 0.397117 | 3.2:-77536377 | None:intergenic |
| GCTGTCATCCAACCAATTGC+AGG | 0.397989 | 3.2:-77537157 | None:intergenic |
| TTGCCTTGATTCTTGGTGAT+GGG | 0.403326 | 3.2:+77538228 | MS.gene057201:CDS |
| GTTGCTTCTGGTTTGATTTG+TGG | 0.403400 | 3.2:+77539272 | MS.gene057201:CDS |
| CTATTGCTGTTCCAATTGCT+TGG | 0.404380 | 3.2:-77538878 | None:intergenic |
| CCTATATGGTTGGCATGTAC+AGG | 0.406055 | 3.2:+77538522 | MS.gene057201:CDS |
| GAGGAGTCTCAATGGTTATA+AGG | 0.419961 | 3.2:+77538109 | MS.gene057201:CDS |
| TCATTGCTTCTAGGATCCAT+TGG | 0.423466 | 3.2:-77536170 | None:intergenic |
| TTCTGCAATGCTTATGGTGC+TGG | 0.424165 | 3.2:+77538651 | MS.gene057201:CDS |
| TCCCATCTAGGTAGAATGTT+CGG | 0.426310 | 3.2:+77539369 | MS.gene057201:intron |
| ATGAACATGGCCTATAACTA+CGG | 0.432565 | 3.2:+77538684 | MS.gene057201:CDS |
| AGGAAACAAATAACAGTTAG+AGG | 0.435356 | 3.2:+77536278 | MS.gene057201:CDS |
| TTTCTATATATAATAGCATA+TGG | 0.439609 | 3.2:-77538981 | None:intergenic |
| TGGATTCGTGAAATTCTTCT+CGG | 0.439741 | 3.2:+77537717 | MS.gene057201:CDS |
| TTCTTTCAGTGGTTCTTCGC+CGG | 0.441235 | 3.2:+77537757 | MS.gene057201:CDS |
| GTTTCGTGTTTATTCGAAGT+TGG | 0.443395 | 3.2:+77536408 | MS.gene057201:CDS |
| ACTGTTATTTGTTTCCTCCA+TGG | 0.443580 | 3.2:-77536272 | None:intergenic |
| CACAATTGCAAGCAATGATC+TGG | 0.443822 | 3.2:-77539041 | None:intergenic |
| TGATTTGTGGAGATGGATTG+TGG | 0.443828 | 3.2:+77539285 | MS.gene057201:CDS |
| CTACTTTCTGGTATACTAGC+AGG | 0.446822 | 3.2:-77538083 | None:intergenic |
| GTTATAGGCCATGTTCATAT+CGG | 0.447379 | 3.2:-77538679 | None:intergenic |
| ATCATTACTTCTTGGTGCTG+TGG | 0.449328 | 3.2:+77538007 | MS.gene057201:CDS |
| ATGCTTGTAAGCCAAGCAAT+TGG | 0.450560 | 3.2:+77538867 | MS.gene057201:CDS |
| CAACTTCTTTCCCAGGAAGC+AGG | 0.452937 | 3.2:+77537690 | MS.gene057201:intron |
| CCAACCAATTGCAGGCTCCT+TGG | 0.459143 | 3.2:-77537149 | None:intergenic |
| AAAAGTGATGGTGTAGTTGC+TGG | 0.461342 | 3.2:+77538744 | MS.gene057201:CDS |
| CATGCTTGCAATCCAAAAGT+AGG | 0.463508 | 3.2:-77537808 | None:intergenic |
| TTCACCTGAGGGAACATCAA+TGG | 0.466222 | 3.2:-77538582 | None:intergenic |
| TCTGGTTTGATTTGTGGAGA+TGG | 0.470689 | 3.2:+77539278 | MS.gene057201:CDS |
| ATGAAACTCAATCTCACTAC+TGG | 0.473510 | 3.2:+77536347 | MS.gene057201:CDS |
| TCACCTGAGGGAACATCAAT+GGG | 0.475560 | 3.2:-77538581 | None:intergenic |
| CTTGGTGCTGTGGTTTCTTG+GGG | 0.477037 | 3.2:+77538017 | MS.gene057201:CDS |
| GATTTCAGTATGACTTATGT+TGG | 0.478042 | 3.2:+77537951 | MS.gene057201:CDS |
| AGTACCAAGGAGCCTGCAAT+TGG | 0.478104 | 3.2:+77537145 | MS.gene057201:CDS |
| AGTATGACTTATGTTGGAGC+AGG | 0.480669 | 3.2:+77537957 | MS.gene057201:CDS |
| AACCTTTAACAAAGCGAGAA+TGG | 0.486612 | 3.2:-77539321 | None:intergenic |
| TTGATGCATGATTTGAAGAC+TGG | 0.491943 | 3.2:+77538816 | MS.gene057201:CDS |
| AGCTTTGGTCCCCATTAGAA+AGG | 0.492724 | 3.2:+77537213 | MS.gene057201:CDS |
| AATGGATTCCATACTCCTAA+AGG | 0.499986 | 3.2:+77537571 | MS.gene057201:CDS |
| GGTTCCACTTCCAATGGCTA+TGG | 0.502799 | 3.2:+77539136 | MS.gene057201:CDS |
| GTATTCTCTTGTCTAGTGAA+TGG | 0.504845 | 3.2:-77536467 | None:intergenic |
| ACTTATTGGGGTTGAATAGG+AGG | 0.507032 | 3.2:+77537077 | MS.gene057201:CDS |
| AGGAGGACTTATGAGCAAGC+AGG | 0.511921 | 3.2:+77537094 | MS.gene057201:CDS |
| AACAGCAGTAGCAGTTCCAC+TGG | 0.515210 | 3.2:-77537542 | None:intergenic |
| GCAGTTTGATTGTGTTTGCA+TGG | 0.516966 | 3.2:+77539207 | MS.gene057201:CDS |
| ATCAAAGGACTAAAAGGAGA+AGG | 0.517695 | 3.2:+77538056 | MS.gene057201:CDS |
| TTGTTTGGGCATTCTTTCAG+TGG | 0.523035 | 3.2:+77537746 | MS.gene057201:CDS |
| AAGCCCATCACCAAGAATCA+AGG | 0.526795 | 3.2:-77538231 | None:intergenic |
| CCTGTACATGCCAACCATAT+AGG | 0.529263 | 3.2:-77538522 | None:intergenic |
| TTTCAGTGGTTCTTCGCCGG+TGG | 0.530797 | 3.2:+77537760 | MS.gene057201:CDS |
| AATCCCATTGATGTTCCCTC+AGG | 0.531314 | 3.2:+77538578 | MS.gene057201:CDS |
| TGGTTTCTTGGGGCATCATG+TGG | 0.532153 | 3.2:+77538027 | MS.gene057201:CDS |
| AAAGGCACAGCCATAGCCAT+TGG | 0.535040 | 3.2:-77539146 | None:intergenic |
| CATGTTGGCATGGATATTTG+TGG | 0.538954 | 3.2:-77538285 | None:intergenic |
| AAATCCCGATGGTATTTACA+AGG | 0.544519 | 3.2:+77538956 | MS.gene057201:CDS |
| CATTGCTTGCAATTGTGTTG+TGG | 0.546205 | 3.2:+77539047 | MS.gene057201:CDS |
| CCAAGGAGCCTGCAATTGGT+TGG | 0.548985 | 3.2:+77537149 | MS.gene057201:CDS |
| TACTGCACAAGTTTGAATGA+TGG | 0.550626 | 3.2:-77536489 | None:intergenic |
| GTACTACCAGGAGTATTCCC+TGG | 0.553929 | 3.2:-77537127 | None:intergenic |
| TTCGCCGGTGGAGATAATTG+TGG | 0.555953 | 3.2:+77537772 | MS.gene057201:CDS |
| GTTGCTGGACTTGTAGGGTG+TGG | 0.557924 | 3.2:+77538759 | MS.gene057201:CDS |
| TGCTATAGCATCGCTGTAGG+AGG | 0.558415 | 3.2:+77536515 | MS.gene057201:CDS |
| TGGAGCCTTGTAAATACCAT+CGG | 0.560277 | 3.2:-77538961 | None:intergenic |
| TGAACATGGCCTATAACTAC+GGG | 0.561537 | 3.2:+77538685 | MS.gene057201:CDS |
| ACAGCCATAGCCATTGGAAG+TGG | 0.562685 | 3.2:-77539140 | None:intergenic |
| AGTAGCATGAGGAGTCTCAA+TGG | 0.563553 | 3.2:+77538101 | MS.gene057201:CDS |
| CAAGCAGGGATTGATACACC+AGG | 0.567204 | 3.2:+77537109 | MS.gene057201:CDS |
| AGAAAACATTCCTATATGGT+TGG | 0.567556 | 3.2:+77538512 | MS.gene057201:CDS |
| GGAGCCTTGTAAATACCATC+GGG | 0.573259 | 3.2:-77538960 | None:intergenic |
| TACTCCTAAAGGAGATGTGA+TGG | 0.575555 | 3.2:+77537582 | MS.gene057201:CDS |
| ATCACCAAGAATCAAGGCAA+TGG | 0.577080 | 3.2:-77538225 | None:intergenic |
| ACTGCCTACACACATATCAA+TGG | 0.578744 | 3.2:-77539189 | None:intergenic |
| GCAGGCTCCTTGGTACTACC+AGG | 0.579102 | 3.2:-77537139 | None:intergenic |
| ACAAAATACCACTTCACCTG+AGG | 0.579884 | 3.2:-77538594 | None:intergenic |
| ATCATGTGGCCTTTAATCAA+AGG | 0.582222 | 3.2:+77538041 | MS.gene057201:CDS |
| TGATGTTCCCTCAGGTGAAG+TGG | 0.583774 | 3.2:+77538586 | MS.gene057201:CDS |
| GATACACCAGGGAATACTCC+TGG | 0.584209 | 3.2:+77537121 | MS.gene057201:CDS |
| GAGATGGGTTCCACTTCCAA+TGG | 0.587735 | 3.2:+77539130 | MS.gene057201:CDS |
| CTATATGGTTGGCATGTACA+GGG | 0.588281 | 3.2:+77538523 | MS.gene057201:CDS |
| AACAAAGCGAGAATGGATGA+AGG | 0.588783 | 3.2:-77539314 | None:intergenic |
| GCATTGCAGAAGCCGAGCGA+GGG | 0.592829 | 3.2:-77538639 | None:intergenic |
| ATCAAACCAGAAGCAACTGC+AGG | 0.595717 | 3.2:-77539266 | None:intergenic |
| TTTGATGTTGGAAATCCCGA+TGG | 0.597167 | 3.2:+77538945 | MS.gene057201:CDS |
| GGAGGACTTATGAGCAAGCA+GGG | 0.597449 | 3.2:+77537095 | MS.gene057201:CDS |
| GATTACAACGATTGAGACGA+TGG | 0.598332 | 3.2:-77538559 | None:intergenic |
| GGAGGAATCTGTGAATCCAA+TGG | 0.600474 | 3.2:+77536154 | MS.gene057201:CDS |
| ATATTACTACCTTTCTAATG+GGG | 0.600914 | 3.2:-77537222 | None:intergenic |
| CAAAATACCACTTCACCTGA+GGG | 0.601804 | 3.2:-77538593 | None:intergenic |
| TCAAAGGACTAAAAGGAGAA+GGG | 0.601817 | 3.2:+77538057 | MS.gene057201:CDS |
| CTGAGATCATCAAGAGGCAA+CGG | 0.603310 | 3.2:-77538468 | None:intergenic |
| AAATCCACAATTATCTCCAC+CGG | 0.605011 | 3.2:-77537776 | None:intergenic |
| GTGTAGTTGCTGGACTTGTA+GGG | 0.605151 | 3.2:+77538754 | MS.gene057201:CDS |
| TACTTTCTGGTATACTAGCA+GGG | 0.607935 | 3.2:-77538082 | None:intergenic |
| TGCTATTATATATAGAAACA+TGG | 0.616203 | 3.2:+77538986 | MS.gene057201:CDS |
| AATCATCATCACATTGAAGA+GGG | 0.616737 | 3.2:+77536212 | MS.gene057201:CDS |
| TTTGCCATTGATATGTGTGT+AGG | 0.620759 | 3.2:+77539185 | MS.gene057201:CDS |
| TGGATTAACCGATATGAACA+TGG | 0.621595 | 3.2:+77538671 | MS.gene057201:CDS |
| GAATCATCATCACATTGAAG+AGG | 0.626811 | 3.2:+77536211 | MS.gene057201:CDS |
| TCACATTGAAGAGGGTCAAG+TGG | 0.632388 | 3.2:+77536220 | MS.gene057201:CDS |
| AGCATTGCAGAAGCCGAGCG+AGG | 0.633923 | 3.2:-77538640 | None:intergenic |
| GTGGCGAAGTCAGAGTGAGA+TGG | 0.637116 | 3.2:-77538839 | None:intergenic |
| GCTTGCTATAGCATCGCTGT+AGG | 0.647898 | 3.2:+77536512 | MS.gene057201:CDS |
| GATTGGTTCAATCACAGTGG+AGG | 0.656647 | 3.2:+77536136 | MS.gene057201:CDS |
| ACAGCAGTAGCAGTTCCACT+GGG | 0.662632 | 3.2:-77537541 | None:intergenic |
| TTTCGTCTGAGATCATCAAG+AGG | 0.663470 | 3.2:-77538474 | None:intergenic |
| GTATACCAGAAAGTAGCATG+AGG | 0.678156 | 3.2:+77538090 | MS.gene057201:CDS |
| GAATACTCCTGGTAGTACCA+AGG | 0.678175 | 3.2:+77537132 | MS.gene057201:CDS |
| TACAAATTAACTTATCCCAG+TGG | 0.686829 | 3.2:+77537526 | MS.gene057201:CDS |
| TGGCTTACAAGCATCGAACG+TGG | 0.698607 | 3.2:-77538858 | None:intergenic |
| TGAATAGAATAGCACCATGG+AGG | 0.711294 | 3.2:+77536258 | MS.gene057201:CDS |
| AAGCAGGGATTGATACACCA+GGG | 0.727787 | 3.2:+77537110 | MS.gene057201:CDS |
| GATGATTGGTTCAATCACAG+TGG | 0.734769 | 3.2:+77536133 | None:intergenic |
| AGTTGAATAGAATAGCACCA+TGG | 0.738039 | 3.2:+77536255 | MS.gene057201:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATCTATTTATCCAAAA+AGG | - | chr3.2:77536772-77536791 | None:intergenic | 15.0% |
| !! | CAAAAAAAGTTAAAAAGAAA+AGG | - | chr3.2:77537628-77537647 | None:intergenic | 15.0% |
| !! | TTAATCTATTTATCCAAAAA+GGG | - | chr3.2:77536771-77536790 | None:intergenic | 15.0% |
| !! | TTTCTATATATAATAGCATA+TGG | - | chr3.2:77538984-77539003 | None:intergenic | 15.0% |
| !!! | AAAGAAATATTAGATTTTAC+AGG | - | chr3.2:77538421-77538440 | None:intergenic | 15.0% |
| !!! | CTTTTCTTTTTAACTTTTTT+TGG | + | chr3.2:77537626-77537645 | MS.gene057201:intron | 15.0% |
| !! | AAATATTACTACCTTTCTAA+TGG | - | chr3.2:77537227-77537246 | None:intergenic | 20.0% |
| !! | AATATTACTACCTTTCTAAT+GGG | - | chr3.2:77537226-77537245 | None:intergenic | 20.0% |
| !! | GAGATAAAATAAAGTCAAAT+TGG | + | chr3.2:77536825-77536844 | MS.gene057201:intron | 20.0% |
| !! | GATTAATTGAGCTTATTTAT+CGG | - | chr3.2:77536961-77536980 | None:intergenic | 20.0% |
| !! | GTTAATTTATCATTACTTCT+TGG | + | chr3.2:77537999-77538018 | MS.gene057201:CDS | 20.0% |
| !! | TGCTATTATATATAGAAACA+TGG | + | chr3.2:77538986-77539005 | MS.gene057201:CDS | 20.0% |
| !!! | ATTAATTTGTTTTTCCAAAC+AGG | - | chr3.2:77536602-77536621 | None:intergenic | 20.0% |
| !!! | TAATCATTTTACCTTGTATT+GGG | + | chr3.2:77536575-77536594 | MS.gene057201:intron | 20.0% |
| !!! | TATTTTCATAAGTTATCTTG+TGG | + | chr3.2:77536697-77536716 | MS.gene057201:intron | 20.0% |
| ! | AAGTTAAAAAGAAAAGGCAA+AGG | - | chr3.2:77537622-77537641 | None:intergenic | 25.0% |
| ! | ATATTACTACCTTTCTAATG+GGG | - | chr3.2:77537225-77537244 | None:intergenic | 25.0% |
| ! | ATCCAATCCAAATAGATATT+TGG | + | chr3.2:77536978-77536997 | MS.gene057201:intron | 25.0% |
| ! | CAAATACTATAGATTCGATA+AGG | - | chr3.2:77538160-77538179 | None:intergenic | 25.0% |
| ! | TAAAAAAGGAAGAATGTGAT+AGG | - | chr3.2:77538918-77538937 | None:intergenic | 25.0% |
| ! | TGTTACACCAAATATCTATT+TGG | - | chr3.2:77536988-77537007 | None:intergenic | 25.0% |
| ! | TTCAAATGTTGCTAAAGAAT+TGG | + | chr3.2:77537312-77537331 | MS.gene057201:intron | 25.0% |
| !! | AAGTTTAAATCCTTTTAGCA+TGG | + | chr3.2:77537389-77537408 | MS.gene057201:intron | 25.0% |
| !! | AGTTTAATCTTGTTATCTCA+AGG | + | chr3.2:77537362-77537381 | MS.gene057201:intron | 25.0% |
| !! | ATATAGAAACATGGCAATTT+TGG | + | chr3.2:77538995-77539014 | MS.gene057201:CDS | 25.0% |
| !! | CTAATCATTTTACCTTGTAT+TGG | + | chr3.2:77536574-77536593 | MS.gene057201:intron | 25.0% |
| !! | GTTTAATCTTGTTATCTCAA+GGG | + | chr3.2:77537363-77537382 | MS.gene057201:intron | 25.0% |
| !! | TATAGAAACATGGCAATTTT+GGG | + | chr3.2:77538996-77539015 | MS.gene057201:CDS | 25.0% |
| !! | TTTATCTCTTGCTATAGAAA+TGG | - | chr3.2:77536813-77536832 | None:intergenic | 25.0% |
| !! | TTTGTTCAATTTCCTACTTT+TGG | + | chr3.2:77537796-77537815 | MS.gene057201:CDS | 25.0% |
| !!! | ATTTGCTATAGTAGCTAATT+TGG | + | chr3.2:77539079-77539098 | MS.gene057201:CDS | 25.0% |
| !!! | CTAATAGCTAGTCTTATAAT+TGG | + | chr3.2:77536302-77536321 | MS.gene057201:CDS | 25.0% |
| AACACCATTCAAGTCAAATT+GGG | - | chr3.2:77537464-77537483 | None:intergenic | 30.0% | |
| AATCATCATCACATTGAAGA+GGG | + | chr3.2:77536212-77536231 | MS.gene057201:CDS | 30.0% | |
| AGAAAACATTCCTATATGGT+TGG | + | chr3.2:77538512-77538531 | MS.gene057201:CDS | 30.0% | |
| AGGAAACAAATAACAGTTAG+AGG | + | chr3.2:77536278-77536297 | MS.gene057201:CDS | 30.0% | |
| CAAGAGAAAACATTCCTATA+TGG | + | chr3.2:77538508-77538527 | MS.gene057201:CDS | 30.0% | |
| CACCAAATATCTATTTGGAT+TGG | - | chr3.2:77536983-77537002 | None:intergenic | 30.0% | |
| CCTTTAATCAAAGGACTAAA+AGG | + | chr3.2:77538050-77538069 | MS.gene057201:CDS | 30.0% | |
| CTAAGTTTAGCTAAAACTGA+AGG | - | chr3.2:77538136-77538155 | None:intergenic | 30.0% | |
| GATTTCAGTATGACTTATGT+TGG | + | chr3.2:77537951-77537970 | MS.gene057201:CDS | 30.0% | |
| GGTTGTAGAACAAAAAACAA+AGG | - | chr3.2:77537852-77537871 | None:intergenic | 30.0% | |
| GTGCAAAAATATACGCAAAA+AGG | - | chr3.2:77538620-77538639 | None:intergenic | 30.0% | |
| GTGCTTTAATCAGTAACAAT+TGG | - | chr3.2:77537908-77537927 | None:intergenic | 30.0% | |
| TACAAATTAACTTATCCCAG+TGG | + | chr3.2:77537526-77537545 | MS.gene057201:CDS | 30.0% | |
| TGAACTTGTGTGATAATTGT+AGG | + | chr3.2:77537040-77537059 | MS.gene057201:intron | 30.0% | |
| TGCTAAAGAATTGGTGTATA+AGG | + | chr3.2:77537321-77537340 | MS.gene057201:intron | 30.0% | |
| ! | CATCAAAAGCCTTGTAAAAA+AGG | - | chr3.2:77538932-77538951 | None:intergenic | 30.0% |
| ! | CCTTTTAGTCCTTTGATTAA+AGG | - | chr3.2:77538053-77538072 | None:intergenic | 30.0% |
| ! | TATAATTTTTCCTGTCCTTG+AGG | + | chr3.2:77538347-77538366 | MS.gene057201:intron | 30.0% |
| ! | TTTTACAAGGCTTTTGATGT+TGG | + | chr3.2:77538933-77538952 | MS.gene057201:CDS | 30.0% |
| !! | AAGATCCTTCTTTTTCATGT+TGG | - | chr3.2:77538303-77538322 | None:intergenic | 30.0% |
| !! | GTTTTGGATCTTACTTATTG+GGG | + | chr3.2:77537065-77537084 | MS.gene057201:CDS | 30.0% |
| !!! | CACATTCTTCCTTTTTTACA+AGG | + | chr3.2:77538920-77538939 | MS.gene057201:CDS | 30.0% |
| !!! | GGTTTTGGATCTTACTTATT+GGG | + | chr3.2:77537064-77537083 | MS.gene057201:CDS | 30.0% |
| !!! | TGGTTTTGGATCTTACTTAT+TGG | + | chr3.2:77537063-77537082 | MS.gene057201:CDS | 30.0% |
| !!! | TTTTGTTGGACTTTTAGCTT+TGG | + | chr3.2:77537198-77537217 | MS.gene057201:CDS | 30.0% |
| AAATCCACAATTATCTCCAC+CGG | - | chr3.2:77537779-77537798 | None:intergenic | 35.0% | |
| AAATCCCGATGGTATTTACA+AGG | + | chr3.2:77538956-77538975 | MS.gene057201:CDS | 35.0% | |
| AACCTTTAACAAAGCGAGAA+TGG | - | chr3.2:77539324-77539343 | None:intergenic | 35.0% | |
| AAGAAGCTCATACATATTGG+GGG | - | chr3.2:77539350-77539369 | None:intergenic | 35.0% | |
| AAGTAGCCACCAACTAAAAA+AGG | - | chr3.2:77539167-77539186 | None:intergenic | 35.0% | |
| ACACCATTCAAGTCAAATTG+GGG | - | chr3.2:77537463-77537482 | None:intergenic | 35.0% | |
| ACTTGTGTGATAATTGTAGG+TGG | + | chr3.2:77537043-77537062 | MS.gene057201:intron | 35.0% | |
| AGAATGTTCGGATTTGGATT+TGG | + | chr3.2:77539381-77539400 | MS.gene057201:CDS | 35.0% | |
| AGCTAAAAGTCCAACAAAAC+TGG | - | chr3.2:77537197-77537216 | None:intergenic | 35.0% | |
| AGTTGAATAGAATAGCACCA+TGG | + | chr3.2:77536255-77536274 | MS.gene057201:CDS | 35.0% | |
| ATCAAAGGACTAAAAGGAGA+AGG | + | chr3.2:77538056-77538075 | MS.gene057201:CDS | 35.0% | |
| ATCATGTGGCCTTTAATCAA+AGG | + | chr3.2:77538041-77538060 | MS.gene057201:CDS | 35.0% | |
| ATCTTGGCCCCAAAAAAATT+GGG | + | chr3.2:77539108-77539127 | MS.gene057201:CDS | 35.0% | |
| ATGAAACTCAATCTCACTAC+TGG | + | chr3.2:77536347-77536366 | MS.gene057201:CDS | 35.0% | |
| ATGAACATGGCCTATAACTA+CGG | + | chr3.2:77538684-77538703 | MS.gene057201:CDS | 35.0% | |
| ATGGCATATGCTGAACAAAA+AGG | + | chr3.2:77539226-77539245 | MS.gene057201:CDS | 35.0% | |
| ATTCAAGTCAAATTGGGGAA+GGG | - | chr3.2:77537458-77537477 | None:intergenic | 35.0% | |
| ATTTCCATTGCCTTGATTCT+TGG | + | chr3.2:77538221-77538240 | MS.gene057201:CDS | 35.0% | |
| CAACACCATTCAAGTCAAAT+TGG | - | chr3.2:77537465-77537484 | None:intergenic | 35.0% | |
| CAGCAGAAACATTGAGATTA+GGG | - | chr3.2:77536379-77536398 | None:intergenic | 35.0% | |
| CATTCTACAACCATGCTAAA+AGG | - | chr3.2:77537402-77537421 | None:intergenic | 35.0% | |
| CTTACTTATTGGGGTTGAAT+AGG | + | chr3.2:77537074-77537093 | MS.gene057201:CDS | 35.0% | |
| CTTTCTTCTTCATTGCTTCT+AGG | - | chr3.2:77536182-77536201 | None:intergenic | 35.0% | |
| GAAGAAGCTCATACATATTG+GGG | - | chr3.2:77539351-77539370 | None:intergenic | 35.0% | |
| GAATCATCATCACATTGAAG+AGG | + | chr3.2:77536211-77536230 | MS.gene057201:CDS | 35.0% | |
| GAATCTGAATGAAATCCTCA+AGG | - | chr3.2:77538365-77538384 | None:intergenic | 35.0% | |
| GCTAATTTGGTAAGAGATCT+TGG | + | chr3.2:77539092-77539111 | MS.gene057201:CDS | 35.0% | |
| GCTACTGCTGTTCTTATTAA+TGG | + | chr3.2:77537553-77537572 | MS.gene057201:CDS | 35.0% | |
| GGAAATAAAAACCTGTAGCA+AGG | - | chr3.2:77538207-77538226 | None:intergenic | 35.0% | |
| GGAAGAAGCTCATACATATT+GGG | - | chr3.2:77539352-77539371 | None:intergenic | 35.0% | |
| GTATTCTCTTGTCTAGTGAA+TGG | - | chr3.2:77536470-77536489 | None:intergenic | 35.0% | |
| GTTATAGGCCATGTTCATAT+CGG | - | chr3.2:77538682-77538701 | None:intergenic | 35.0% | |
| GTTTCGTGTTTATTCGAAGT+TGG | + | chr3.2:77536408-77536427 | MS.gene057201:CDS | 35.0% | |
| TACTGCACAAGTTTGAATGA+TGG | - | chr3.2:77536492-77536511 | None:intergenic | 35.0% | |
| TCAAAGGACTAAAAGGAGAA+GGG | + | chr3.2:77538057-77538076 | MS.gene057201:CDS | 35.0% | |
| TCAAATTGTATCCTTGCTAC+AGG | + | chr3.2:77538193-77538212 | MS.gene057201:intron | 35.0% | |
| TGGATTAACCGATATGAACA+TGG | + | chr3.2:77538671-77538690 | MS.gene057201:CDS | 35.0% | |
| TGGATTCGTGAAATTCTTCT+CGG | + | chr3.2:77537717-77537736 | MS.gene057201:CDS | 35.0% | |
| TTGATGCATGATTTGAAGAC+TGG | + | chr3.2:77538816-77538835 | MS.gene057201:CDS | 35.0% | |
| TTTGCCATTGATATGTGTGT+AGG | + | chr3.2:77539185-77539204 | MS.gene057201:CDS | 35.0% | |
| ! | AATGGATTCCATACTCCTAA+AGG | + | chr3.2:77537571-77537590 | MS.gene057201:CDS | 35.0% |
| ! | ACATTGAATTGGACCCTTTT+TGG | + | chr3.2:77536755-77536774 | MS.gene057201:intron | 35.0% |
| ! | ACTGTTATTTGTTTCCTCCA+TGG | - | chr3.2:77536275-77536294 | None:intergenic | 35.0% |
| ! | ATCCATTCTCGCTTTGTTAA+AGG | + | chr3.2:77539319-77539338 | MS.gene057201:CDS | 35.0% |
| ! | GTGATAATTGTAGGTGGTTT+TGG | + | chr3.2:77537049-77537068 | MS.gene057201:intron | 35.0% |
| ! | GTTGTAAAAGTTGTCGACTA+TGG | + | chr3.2:77537873-77537892 | MS.gene057201:intron | 35.0% |
| ! | TACTTTCTGGTATACTAGCA+GGG | - | chr3.2:77538085-77538104 | None:intergenic | 35.0% |
| ! | TAGTCGACAACTTTTACAAC+TGG | - | chr3.2:77537873-77537892 | None:intergenic | 35.0% |
| !! | CTATTTGTGACCAGTTTTGT+TGG | + | chr3.2:77537184-77537203 | MS.gene057201:CDS | 35.0% |
| !!! | AACCCATCTCCCAATTTTTT+TGG | - | chr3.2:77539120-77539139 | None:intergenic | 35.0% |
| !!! | ACCCATCTCCCAATTTTTTT+GGG | - | chr3.2:77539119-77539138 | None:intergenic | 35.0% |
| AACAAAGCGAGAATGGATGA+AGG | - | chr3.2:77539317-77539336 | None:intergenic | 40.0% | |
| ACAAAATACCACTTCACCTG+AGG | - | chr3.2:77538597-77538616 | None:intergenic | 40.0% | |
| ACTAGTTCAACTTCTTTCCC+AGG | + | chr3.2:77537683-77537702 | MS.gene057201:intron | 40.0% | |
| ACTGCCTACACACATATCAA+TGG | - | chr3.2:77539192-77539211 | None:intergenic | 40.0% | |
| ACTTATTGGGGTTGAATAGG+AGG | + | chr3.2:77537077-77537096 | MS.gene057201:CDS | 40.0% | |
| AGTATGACTTATGTTGGAGC+AGG | + | chr3.2:77537957-77537976 | MS.gene057201:CDS | 40.0% | |
| ATCACCAAGAATCAAGGCAA+TGG | - | chr3.2:77538228-77538247 | None:intergenic | 40.0% | |
| ATCCGAACATTCTACCTAGA+TGG | - | chr3.2:77539374-77539393 | None:intergenic | 40.0% | |
| ATGCTGAACAAAAAGGAAGC+TGG | + | chr3.2:77539233-77539252 | MS.gene057201:CDS | 40.0% | |
| ATGCTTGTAAGCCAAGCAAT+TGG | + | chr3.2:77538867-77538886 | MS.gene057201:CDS | 40.0% | |
| ATTGCCTTGATTCTTGGTGA+TGG | + | chr3.2:77538227-77538246 | MS.gene057201:CDS | 40.0% | |
| ATTTCCATAAGCTCACTCTC+TGG | - | chr3.2:77536887-77536906 | None:intergenic | 40.0% | |
| CAAAATACCACTTCACCTGA+GGG | - | chr3.2:77538596-77538615 | None:intergenic | 40.0% | |
| CAAGCAATTGGAACAGCAAT+AGG | + | chr3.2:77538879-77538898 | MS.gene057201:CDS | 40.0% | |
| CACAATTGCAAGCAATGATC+TGG | - | chr3.2:77539044-77539063 | None:intergenic | 40.0% | |
| CATGCTTGCAATCCAAAAGT+AGG | - | chr3.2:77537811-77537830 | None:intergenic | 40.0% | |
| CATGTTGGCATGGATATTTG+TGG | - | chr3.2:77538288-77538307 | None:intergenic | 40.0% | |
| CATTCAAGTCAAATTGGGGA+AGG | - | chr3.2:77537459-77537478 | None:intergenic | 40.0% | |
| CATTGCTTGCAATTGTGTTG+TGG | + | chr3.2:77539047-77539066 | MS.gene057201:CDS | 40.0% | |
| CCATGCCAACATGAAAAAGA+AGG | + | chr3.2:77538295-77538314 | MS.gene057201:CDS | 40.0% | |
| CCCCAAAAAAATTGGGAGAT+GGG | + | chr3.2:77539115-77539134 | MS.gene057201:CDS | 40.0% | |
| CTAGGTAGAATGTTCGGATT+TGG | + | chr3.2:77539375-77539394 | MS.gene057201:intron | 40.0% | |
| CTATATGGTTGGCATGTACA+GGG | + | chr3.2:77538523-77538542 | MS.gene057201:CDS | 40.0% | |
| GAGGAGTCTCAATGGTTATA+AGG | + | chr3.2:77538109-77538128 | MS.gene057201:CDS | 40.0% | |
| GATCTTGGCCCCAAAAAAAT+TGG | + | chr3.2:77539107-77539126 | MS.gene057201:CDS | 40.0% | |
| GATTACAACGATTGAGACGA+TGG | - | chr3.2:77538562-77538581 | None:intergenic | 40.0% | |
| GCAGCAGAAACATTGAGATT+AGG | - | chr3.2:77536380-77536399 | None:intergenic | 40.0% | |
| GCAGCTTACAGACATTGAAT+TGG | + | chr3.2:77536744-77536763 | MS.gene057201:intron | 40.0% | |
| GCAGTTTGATTGTGTTTGCA+TGG | + | chr3.2:77539207-77539226 | MS.gene057201:CDS | 40.0% | |
| GGGAAGAAGCTCATACATAT+TGG | - | chr3.2:77539353-77539372 | None:intergenic | 40.0% | |
| GTATACCAGAAAGTAGCATG+AGG | + | chr3.2:77538090-77538109 | MS.gene057201:CDS | 40.0% | |
| TACTCCTAAAGGAGATGTGA+TGG | + | chr3.2:77537582-77537601 | MS.gene057201:CDS | 40.0% | |
| TCCCATCTAGGTAGAATGTT+CGG | + | chr3.2:77539369-77539388 | MS.gene057201:intron | 40.0% | |
| TCCGAACATTCTACCTAGAT+GGG | - | chr3.2:77539373-77539392 | None:intergenic | 40.0% | |
| TGAACATGGCCTATAACTAC+GGG | + | chr3.2:77538685-77538704 | MS.gene057201:CDS | 40.0% | |
| TGAATAGAATAGCACCATGG+AGG | + | chr3.2:77536258-77536277 | MS.gene057201:CDS | 40.0% | |
| TGAATGAAATCCTCAAGGAC+AGG | - | chr3.2:77538360-77538379 | None:intergenic | 40.0% | |
| TTGTTTGGGCATTCTTTCAG+TGG | + | chr3.2:77537746-77537765 | MS.gene057201:CDS | 40.0% | |
| TTTCCATAAGCTCACTCTCT+GGG | - | chr3.2:77536886-77536905 | None:intergenic | 40.0% | |
| TTTGATGTTGGAAATCCCGA+TGG | + | chr3.2:77538945-77538964 | MS.gene057201:CDS | 40.0% | |
| ! | AAAAGTGATGGTGTAGTTGC+TGG | + | chr3.2:77538744-77538763 | MS.gene057201:CDS | 40.0% |
| ! | AATGTTTCTGCTGCTCTACT+TGG | + | chr3.2:77536386-77536405 | MS.gene057201:CDS | 40.0% |
| ! | AGCTACTTTCCCGTAGTTAT+AGG | - | chr3.2:77538697-77538716 | None:intergenic | 40.0% |
| ! | AGGCAAAGGAAGTACATACT+TGG | - | chr3.2:77537608-77537627 | None:intergenic | 40.0% |
| ! | CTACTTTCTGGTATACTAGC+AGG | - | chr3.2:77538086-77538105 | None:intergenic | 40.0% |
| ! | CTATTGCTGTTCCAATTGCT+TGG | - | chr3.2:77538881-77538900 | None:intergenic | 40.0% |
| ! | TCACATCTCCTTTAGGAGTA+TGG | - | chr3.2:77537582-77537601 | None:intergenic | 40.0% |
| ! | TGGAGCCTTGTAAATACCAT+CGG | - | chr3.2:77538964-77538983 | None:intergenic | 40.0% |
| ! | TTGCCTTGATTCTTGGTGAT+GGG | + | chr3.2:77538228-77538247 | MS.gene057201:CDS | 40.0% |
| ! | TTTCGTCTGAGATCATCAAG+AGG | - | chr3.2:77538477-77538496 | None:intergenic | 40.0% |
| !! | AAACATGGCAATTTTGGGTG+TGG | + | chr3.2:77539001-77539020 | MS.gene057201:CDS | 40.0% |
| !! | ATCATTACTTCTTGGTGCTG+TGG | + | chr3.2:77538007-77538026 | MS.gene057201:CDS | 40.0% |
| !! | CAAAAAGGAAGCTGGTTTGA+TGG | + | chr3.2:77539241-77539260 | MS.gene057201:CDS | 40.0% |
| !! | CCTTCTTTTTCATGTTGGCA+TGG | - | chr3.2:77538298-77538317 | None:intergenic | 40.0% |
| !! | CTACTTTTGGATTGCAAGCA+TGG | + | chr3.2:77537809-77537828 | MS.gene057201:CDS | 40.0% |
| !! | CTTCCCCAATTTGACTTGAA+TGG | + | chr3.2:77537457-77537476 | MS.gene057201:intron | 40.0% |
| !! | GTTGCTTCTGGTTTGATTTG+TGG | + | chr3.2:77539272-77539291 | MS.gene057201:CDS | 40.0% |
| !! | TATATTTTTGCACCCTCGCT+CGG | + | chr3.2:77538627-77538646 | MS.gene057201:CDS | 40.0% |
| !! | TCATTGCTTCTAGGATCCAT+TGG | - | chr3.2:77536173-77536192 | None:intergenic | 40.0% |
| !! | TCTGGTTTGATTTGTGGAGA+TGG | + | chr3.2:77539278-77539297 | MS.gene057201:CDS | 40.0% |
| !! | TGATTTGTGGAGATGGATTG+TGG | + | chr3.2:77539285-77539304 | MS.gene057201:CDS | 40.0% |
| !!! | ACCATCACTTTTTCCAGCTA+AGG | - | chr3.2:77538736-77538755 | None:intergenic | 40.0% |
| !!! | ATCACTTTTTCCAGCTAAGG+CGG | - | chr3.2:77538733-77538752 | None:intergenic | 40.0% |
| !!! | ATGGCTGTGCCTTTTTTAGT+TGG | + | chr3.2:77539155-77539174 | MS.gene057201:CDS | 40.0% |
| !!! | CCCATCTCCCAATTTTTTTG+GGG | - | chr3.2:77539118-77539137 | None:intergenic | 40.0% |
| !!! | CTTCTCGGCAAGTTTTGTTT+GGG | + | chr3.2:77537732-77537751 | MS.gene057201:CDS | 40.0% |
| !!! | TCTTCTCGGCAAGTTTTGTT+TGG | + | chr3.2:77537731-77537750 | MS.gene057201:CDS | 40.0% |
| AAGCACTTGTGAGGCTGTTT+GGG | - | chr3.2:77536935-77536954 | None:intergenic | 45.0% | |
| AAGCAGGGATTGATACACCA+GGG | + | chr3.2:77537110-77537129 | MS.gene057201:CDS | 45.0% | |
| AAGCCCATCACCAAGAATCA+AGG | - | chr3.2:77538234-77538253 | None:intergenic | 45.0% | |
| AATCCATGAACCTGCTTCCT+GGG | - | chr3.2:77537703-77537722 | None:intergenic | 45.0% | |
| AATCCCATTGATGTTCCCTC+AGG | + | chr3.2:77538578-77538597 | MS.gene057201:CDS | 45.0% | |
| ACCTTGTATTGGGTCCTGTT+TGG | + | chr3.2:77536585-77536604 | MS.gene057201:intron | 45.0% | |
| AGTAGCATGAGGAGTCTCAA+TGG | + | chr3.2:77538101-77538120 | MS.gene057201:CDS | 45.0% | |
| ATCAAACCAGAAGCAACTGC+AGG | - | chr3.2:77539269-77539288 | None:intergenic | 45.0% | |
| CCTATATGGTTGGCATGTAC+AGG | + | chr3.2:77538522-77538541 | MS.gene057201:CDS | 45.0% | |
| CCTGTACATGCCAACCATAT+AGG | - | chr3.2:77538525-77538544 | None:intergenic | 45.0% | |
| CTGAGATCATCAAGAGGCAA+CGG | - | chr3.2:77538471-77538490 | None:intergenic | 45.0% | |
| GAATACTCCTGGTAGTACCA+AGG | + | chr3.2:77537132-77537151 | MS.gene057201:CDS | 45.0% | |
| GCCCCAAAAAAATTGGGAGA+TGG | + | chr3.2:77539114-77539133 | MS.gene057201:CDS | 45.0% | |
| GCCTTAGCTGGAAAAAGTGA+TGG | + | chr3.2:77538732-77538751 | MS.gene057201:CDS | 45.0% | |
| GGAGGAATCTGTGAATCCAA+TGG | + | chr3.2:77536154-77536173 | MS.gene057201:CDS | 45.0% | |
| GTATGAGCTTCTTCCCATCT+AGG | + | chr3.2:77539357-77539376 | MS.gene057201:intron | 45.0% | |
| GTGTAGTTGCTGGACTTGTA+GGG | + | chr3.2:77538754-77538773 | MS.gene057201:CDS | 45.0% | |
| TAAGCACTTGTGAGGCTGTT+TGG | - | chr3.2:77536936-77536955 | None:intergenic | 45.0% | |
| TATCCCAGAGAGTGAGCTTA+TGG | + | chr3.2:77536880-77536899 | MS.gene057201:intron | 45.0% | |
| TATCGGCATAAGCACTTGTG+AGG | - | chr3.2:77536944-77536963 | None:intergenic | 45.0% | |
| TCACATTGAAGAGGGTCAAG+TGG | + | chr3.2:77536220-77536239 | MS.gene057201:CDS | 45.0% | |
| TCACCTGAGGGAACATCAAT+GGG | - | chr3.2:77538584-77538603 | None:intergenic | 45.0% | |
| TCCAAACAGGACCCAATACA+AGG | - | chr3.2:77536589-77536608 | None:intergenic | 45.0% | |
| TTCACCTGAGGGAACATCAA+TGG | - | chr3.2:77538585-77538604 | None:intergenic | 45.0% | |
| TTCTGCAATGCTTATGGTGC+TGG | + | chr3.2:77538651-77538670 | MS.gene057201:CDS | 45.0% | |
| TTCTTTCAGTGGTTCTTCGC+CGG | + | chr3.2:77537757-77537776 | MS.gene057201:CDS | 45.0% | |
| TTGGCCATCACATCTCCTTT+AGG | - | chr3.2:77537589-77537608 | None:intergenic | 45.0% | |
| ! | AGCTTTGGTCCCCATTAGAA+AGG | + | chr3.2:77537213-77537232 | MS.gene057201:CDS | 45.0% |
| ! | GATTGGTTCAATCACAGTGG+AGG | + | chr3.2:77536136-77536155 | MS.gene057201:CDS | 45.0% |
| ! | GGAGCCTTGTAAATACCATC+GGG | - | chr3.2:77538963-77538982 | None:intergenic | 45.0% |
| !! | AGACTCCTCATGCTACTTTC+TGG | - | chr3.2:77538098-77538117 | None:intergenic | 45.0% |
| !! | ATGGCAATTTTGGGTGTGGA+AGG | + | chr3.2:77539005-77539024 | MS.gene057201:CDS | 45.0% |
| !! | TCTTGGTGCTGTGGTTTCTT+GGG | + | chr3.2:77538016-77538035 | MS.gene057201:CDS | 45.0% |
| !! | TTCTTGGTGCTGTGGTTTCT+TGG | + | chr3.2:77538015-77538034 | MS.gene057201:CDS | 45.0% |
| !!! | GCTGTGCCTTTTTTAGTTGG+TGG | + | chr3.2:77539158-77539177 | MS.gene057201:CDS | 45.0% |
| !!! | TTTAATTTAATGAATTTTTT+AGG | + | chr3.2:77537653-77537672 | MS.gene057201:intron | 5.0% |
| AACAGCAGTAGCAGTTCCAC+TGG | - | chr3.2:77537545-77537564 | None:intergenic | 50.0% | |
| ACAGCAGTAGCAGTTCCACT+GGG | - | chr3.2:77537544-77537563 | None:intergenic | 50.0% | |
| ACAGCCATAGCCATTGGAAG+TGG | - | chr3.2:77539143-77539162 | None:intergenic | 50.0% | |
| AGGAGGACTTATGAGCAAGC+AGG | + | chr3.2:77537094-77537113 | MS.gene057201:CDS | 50.0% | |
| AGTACCAAGGAGCCTGCAAT+TGG | + | chr3.2:77537145-77537164 | MS.gene057201:CDS | 50.0% | |
| ATGGTTCCTGCAGTTGCTTC+TGG | + | chr3.2:77539260-77539279 | MS.gene057201:CDS | 50.0% | |
| CAACTTCTTTCCCAGGAAGC+AGG | + | chr3.2:77537690-77537709 | MS.gene057201:intron | 50.0% | |
| CAAGCAGGGATTGATACACC+AGG | + | chr3.2:77537109-77537128 | MS.gene057201:CDS | 50.0% | |
| CATCAAGAGGCAACGGTTTC+TGG | - | chr3.2:77538464-77538483 | None:intergenic | 50.0% | |
| CTCGGCTTCTGCAATGCTTA+TGG | + | chr3.2:77538645-77538664 | MS.gene057201:CDS | 50.0% | |
| GAATCCATGAACCTGCTTCC+TGG | - | chr3.2:77537704-77537723 | None:intergenic | 50.0% | |
| GATACACCAGGGAATACTCC+TGG | + | chr3.2:77537121-77537140 | MS.gene057201:CDS | 50.0% | |
| GCTGTCATCCAACCAATTGC+AGG | - | chr3.2:77537160-77537179 | None:intergenic | 50.0% | |
| GGAGGACTTATGAGCAAGCA+GGG | + | chr3.2:77537095-77537114 | MS.gene057201:CDS | 50.0% | |
| GGTGTAGTTGCTGGACTTGT+AGG | + | chr3.2:77538753-77538772 | MS.gene057201:CDS | 50.0% | |
| GGTTCCACTTCCAATGGCTA+TGG | + | chr3.2:77539136-77539155 | MS.gene057201:CDS | 50.0% | |
| TGAAGAGGGTCAAGTGGCTT+TGG | + | chr3.2:77536226-77536245 | MS.gene057201:CDS | 50.0% | |
| TGATGTTCCCTCAGGTGAAG+TGG | + | chr3.2:77538586-77538605 | MS.gene057201:CDS | 50.0% | |
| TGCTATAGCATCGCTGTAGG+AGG | + | chr3.2:77536515-77536534 | MS.gene057201:CDS | 50.0% | |
| TTCGCCGGTGGAGATAATTG+TGG | + | chr3.2:77537772-77537791 | MS.gene057201:CDS | 50.0% | |
| TTTCCCAGGAAGCAGGTTCA+TGG | + | chr3.2:77537697-77537716 | MS.gene057201:intron | 50.0% | |
| ! | AAAGGCACAGCCATAGCCAT+TGG | - | chr3.2:77539149-77539168 | None:intergenic | 50.0% |
| ! | GAGATGGGTTCCACTTCCAA+TGG | + | chr3.2:77539130-77539149 | MS.gene057201:CDS | 50.0% |
| ! | TGGTTTCTTGGGGCATCATG+TGG | + | chr3.2:77538027-77538046 | MS.gene057201:CDS | 50.0% |
| !! | AGGCAACGGTTTCTGGTTAC+TGG | - | chr3.2:77538457-77538476 | None:intergenic | 50.0% |
| !! | CTTGGTGCTGTGGTTTCTTG+GGG | + | chr3.2:77538017-77538036 | MS.gene057201:CDS | 50.0% |
| !! | GCTTGCTATAGCATCGCTGT+AGG | + | chr3.2:77536512-77536531 | MS.gene057201:CDS | 50.0% |
| !! | GTACTACCAGGAGTATTCCC+TGG | - | chr3.2:77537130-77537149 | None:intergenic | 50.0% |
| !! | TGGCTTACAAGCATCGAACG+TGG | - | chr3.2:77538861-77538880 | None:intergenic | 50.0% |
| CCAACCAATTGCAGGCTCCT+TGG | - | chr3.2:77537152-77537171 | None:intergenic | 55.0% | |
| CCAAGGAGCCTGCAATTGGT+TGG | + | chr3.2:77537149-77537168 | MS.gene057201:CDS | 55.0% | |
| GTGGCGAAGTCAGAGTGAGA+TGG | - | chr3.2:77538842-77538861 | None:intergenic | 55.0% | |
| GTTGCTGGACTTGTAGGGTG+TGG | + | chr3.2:77538759-77538778 | MS.gene057201:CDS | 55.0% | |
| TTTCAGTGGTTCTTCGCCGG+TGG | + | chr3.2:77537760-77537779 | MS.gene057201:CDS | 55.0% | |
| TTTGTGCTTGCCGCCTTAGC+TGG | + | chr3.2:77538720-77538739 | MS.gene057201:CDS | 55.0% | |
| AGCATTGCAGAAGCCGAGCG+AGG | - | chr3.2:77538643-77538662 | None:intergenic | 60.0% | |
| GCAGGCTCCTTGGTACTACC+AGG | - | chr3.2:77537142-77537161 | None:intergenic | 60.0% | |
| GCATTGCAGAAGCCGAGCGA+GGG | - | chr3.2:77538642-77538661 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 77536134 | 77539411 | 77536134 | ID=MS.gene057201 |
| chr3.2 | mRNA | 77536134 | 77539411 | 77536134 | ID=MS.gene057201.t1;Parent=MS.gene057201 |
| chr3.2 | exon | 77536134 | 77536536 | 77536134 | ID=MS.gene057201.t1.exon1;Parent=MS.gene057201.t1 |
| chr3.2 | CDS | 77536134 | 77536536 | 77536134 | ID=cds.MS.gene057201.t1;Parent=MS.gene057201.t1 |
| chr3.2 | exon | 77537062 | 77537234 | 77537062 | ID=MS.gene057201.t1.exon2;Parent=MS.gene057201.t1 |
| chr3.2 | CDS | 77537062 | 77537234 | 77537062 | ID=cds.MS.gene057201.t1;Parent=MS.gene057201.t1 |
| chr3.2 | exon | 77537511 | 77537608 | 77537511 | ID=MS.gene057201.t1.exon3;Parent=MS.gene057201.t1 |
| chr3.2 | CDS | 77537511 | 77537608 | 77537511 | ID=cds.MS.gene057201.t1;Parent=MS.gene057201.t1 |
| chr3.2 | exon | 77537705 | 77537839 | 77537705 | ID=MS.gene057201.t1.exon4;Parent=MS.gene057201.t1 |
| chr3.2 | CDS | 77537705 | 77537839 | 77537705 | ID=cds.MS.gene057201.t1;Parent=MS.gene057201.t1 |
| chr3.2 | exon | 77537941 | 77538130 | 77537941 | ID=MS.gene057201.t1.exon5;Parent=MS.gene057201.t1 |
| chr3.2 | CDS | 77537941 | 77538130 | 77537941 | ID=cds.MS.gene057201.t1;Parent=MS.gene057201.t1 |
| chr3.2 | exon | 77538215 | 77538329 | 77538215 | ID=MS.gene057201.t1.exon6;Parent=MS.gene057201.t1 |
| chr3.2 | CDS | 77538215 | 77538329 | 77538215 | ID=cds.MS.gene057201.t1;Parent=MS.gene057201.t1 |
| chr3.2 | exon | 77538451 | 77539340 | 77538451 | ID=MS.gene057201.t1.exon7;Parent=MS.gene057201.t1 |
| chr3.2 | CDS | 77538451 | 77539340 | 77538451 | ID=cds.MS.gene057201.t1;Parent=MS.gene057201.t1 |
| chr3.2 | exon | 77539379 | 77539411 | 77539379 | ID=MS.gene057201.t1.exon8;Parent=MS.gene057201.t1 |
| chr3.2 | CDS | 77539379 | 77539411 | 77539379 | ID=cds.MS.gene057201.t1;Parent=MS.gene057201.t1 |
| Gene Sequence |
| Protein sequence |
