Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069192.t1 | RHN54855.1 | 99.7 | 297 | 1 | 0 | 1 | 297 | 2 | 298 | 8.20E-164 | 586.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069192.t1 | Q93XM7 | 75.7 | 300 | 70 | 1 | 1 | 297 | 1 | 300 | 8.7e-130 | 464.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069192.t1 | G7KF41 | 99.7 | 297 | 1 | 0 | 1 | 297 | 1 | 297 | 5.9e-164 | 586.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene069192 | MS.gene052954 | PPI |
| MS.gene33379 | MS.gene069192 | PPI |
| MS.gene069192 | MS.gene24924 | PPI |
| MS.gene068250 | MS.gene069192 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069192.t1 | MTR_5g030530 | 99.663 | 297 | 1 | 0 | 1 | 297 | 1 | 297 | 0.0 | 598 |
| MS.gene069192.t1 | MTR_8g066975 | 84.512 | 297 | 46 | 0 | 1 | 297 | 1 | 297 | 0.0 | 518 |
| MS.gene069192.t1 | MTR_4g088545 | 35.256 | 312 | 176 | 9 | 1 | 297 | 1 | 301 | 1.81e-44 | 153 |
| MS.gene069192.t1 | MTR_2g102010 | 34.333 | 300 | 178 | 6 | 1 | 296 | 10 | 294 | 2.30e-43 | 150 |
| MS.gene069192.t1 | MTR_4g012850 | 32.180 | 289 | 178 | 6 | 6 | 291 | 14 | 287 | 2.77e-40 | 142 |
| MS.gene069192.t1 | MTR_4g088545 | 35.135 | 259 | 145 | 7 | 1 | 245 | 1 | 250 | 8.08e-35 | 127 |
| MS.gene069192.t1 | MTR_4g088545 | 27.979 | 193 | 127 | 4 | 106 | 293 | 10 | 195 | 6.68e-15 | 73.6 |
| MS.gene069192.t1 | MTR_4g088545 | 36.765 | 204 | 112 | 6 | 1 | 196 | 1 | 195 | 1.19e-29 | 113 |
| MS.gene069192.t1 | MTR_4g088545 | 27.979 | 193 | 127 | 4 | 106 | 293 | 10 | 195 | 2.13e-15 | 74.3 |
| MS.gene069192.t1 | MTR_8g027975 | 29.412 | 323 | 190 | 8 | 1 | 297 | 44 | 354 | 1.25e-28 | 112 |
| MS.gene069192.t1 | MTR_5g009500 | 28.931 | 318 | 190 | 7 | 4 | 297 | 34 | 339 | 1.01e-27 | 110 |
| MS.gene069192.t1 | MTR_5g009500 | 28.218 | 202 | 129 | 4 | 102 | 296 | 32 | 224 | 1.07e-12 | 67.8 |
| MS.gene069192.t1 | MTR_2g436930 | 28.840 | 319 | 186 | 10 | 9 | 296 | 16 | 324 | 1.15e-27 | 109 |
| MS.gene069192.t1 | MTR_7g109135 | 28.520 | 277 | 186 | 6 | 24 | 296 | 38 | 306 | 2.26e-26 | 106 |
| MS.gene069192.t1 | MTR_7g109135 | 29.940 | 167 | 110 | 2 | 111 | 275 | 25 | 186 | 7.95e-16 | 76.6 |
| MS.gene069192.t1 | MTR_4g119770 | 27.245 | 323 | 192 | 9 | 7 | 296 | 13 | 325 | 7.14e-26 | 105 |
| MS.gene069192.t1 | MTR_5g055410 | 28.571 | 280 | 182 | 8 | 24 | 296 | 37 | 305 | 2.34e-24 | 101 |
| MS.gene069192.t1 | MTR_5g055410 | 25.389 | 193 | 123 | 7 | 23 | 207 | 134 | 313 | 2.25e-11 | 63.9 |
| MS.gene069192.t1 | MTR_1g090330 | 27.437 | 277 | 190 | 6 | 24 | 297 | 30 | 298 | 1.41e-23 | 98.2 |
| MS.gene069192.t1 | MTR_1g090330 | 28.947 | 190 | 126 | 5 | 11 | 198 | 114 | 296 | 4.60e-15 | 74.3 |
| MS.gene069192.t1 | MTR_3g025800 | 27.778 | 324 | 189 | 13 | 4 | 297 | 24 | 332 | 3.23e-23 | 98.2 |
| MS.gene069192.t1 | MTR_1g087840 | 26.715 | 277 | 191 | 6 | 24 | 296 | 35 | 303 | 9.14e-23 | 96.3 |
| MS.gene069192.t1 | MTR_7g109135 | 28.814 | 236 | 156 | 6 | 65 | 296 | 1 | 228 | 2.62e-22 | 93.6 |
| MS.gene069192.t1 | MTR_4g114320 | 25.256 | 293 | 198 | 5 | 6 | 296 | 121 | 394 | 5.79e-22 | 95.1 |
| MS.gene069192.t1 | MTR_7g109135 | 27.076 | 277 | 183 | 6 | 24 | 296 | 38 | 299 | 1.93e-21 | 92.4 |
| MS.gene069192.t1 | MTR_7g109135 | 29.341 | 167 | 104 | 3 | 111 | 275 | 25 | 179 | 1.79e-12 | 67.0 |
| MS.gene069192.t1 | MTR_1g012030 | 26.756 | 299 | 186 | 7 | 6 | 296 | 137 | 410 | 2.49e-21 | 93.6 |
| MS.gene069192.t1 | MTR_3g104600 | 27.451 | 306 | 200 | 7 | 6 | 297 | 33 | 330 | 6.60e-21 | 91.7 |
| MS.gene069192.t1 | MTR_3g107510 | 25.510 | 294 | 196 | 6 | 6 | 296 | 120 | 393 | 1.65e-20 | 90.9 |
| MS.gene069192.t1 | MTR_4g057850 | 29.021 | 286 | 178 | 9 | 10 | 286 | 24 | 293 | 1.79e-20 | 89.7 |
| MS.gene069192.t1 | MTR_4g057850 | 32.386 | 176 | 108 | 5 | 19 | 191 | 128 | 295 | 1.39e-16 | 79.0 |
| MS.gene069192.t1 | MTR_8g098240 | 27.740 | 292 | 182 | 9 | 10 | 297 | 322 | 588 | 2.44e-20 | 91.3 |
| MS.gene069192.t1 | MTR_7g066690 | 29.286 | 280 | 172 | 10 | 24 | 293 | 33 | 296 | 3.32e-20 | 89.0 |
| MS.gene069192.t1 | MTR_7g066690 | 26.020 | 196 | 132 | 2 | 4 | 199 | 117 | 299 | 4.67e-16 | 77.4 |
| MS.gene069192.t1 | MTR_7g066690 | 27.749 | 191 | 125 | 4 | 117 | 296 | 19 | 207 | 3.38e-14 | 72.0 |
| MS.gene069192.t1 | MTR_3g462140 | 30.742 | 283 | 171 | 10 | 24 | 296 | 31 | 298 | 3.95e-20 | 88.6 |
| MS.gene069192.t1 | MTR_3g462140 | 29.348 | 184 | 115 | 4 | 19 | 201 | 131 | 300 | 9.94e-16 | 76.3 |
| MS.gene069192.t1 | MTR_3g462140 | 28.019 | 207 | 139 | 6 | 96 | 296 | 4 | 206 | 7.67e-14 | 70.9 |
| MS.gene069192.t1 | MTR_6g091800 | 24.667 | 300 | 209 | 6 | 5 | 296 | 16 | 306 | 7.68e-20 | 88.2 |
| MS.gene069192.t1 | MTR_4g018750 | 29.286 | 280 | 172 | 10 | 24 | 293 | 31 | 294 | 1.20e-19 | 87.4 |
| MS.gene069192.t1 | MTR_4g018750 | 26.000 | 200 | 133 | 3 | 1 | 198 | 110 | 296 | 6.71e-15 | 73.9 |
| MS.gene069192.t1 | MTR_4g018750 | 27.225 | 191 | 126 | 4 | 117 | 296 | 17 | 205 | 1.68e-14 | 72.8 |
| MS.gene069192.t1 | MTR_7g109135 | 29.245 | 212 | 138 | 6 | 89 | 296 | 4 | 207 | 5.58e-19 | 84.0 |
| MS.gene069192.t1 | MTR_8g076760 | 25.965 | 285 | 180 | 11 | 23 | 290 | 29 | 299 | 6.76e-19 | 85.5 |
| MS.gene069192.t1 | MTR_8g076760 | 26.961 | 204 | 128 | 8 | 7 | 199 | 112 | 305 | 2.76e-13 | 69.3 |
| MS.gene069192.t1 | MTR_6g034515 | 28.369 | 282 | 172 | 6 | 23 | 296 | 82 | 341 | 1.59e-18 | 85.1 |
| MS.gene069192.t1 | MTR_7g084400 | 26.421 | 299 | 184 | 9 | 8 | 296 | 213 | 485 | 5.48e-18 | 84.3 |
| MS.gene069192.t1 | MTR_3g098460 | 26.821 | 302 | 188 | 10 | 5 | 296 | 202 | 480 | 3.23e-17 | 82.0 |
| MS.gene069192.t1 | MTR_3g104500 | 23.179 | 302 | 214 | 9 | 1 | 293 | 27 | 319 | 3.42e-17 | 80.9 |
| MS.gene069192.t1 | MTR_2g436930 | 27.572 | 243 | 144 | 8 | 76 | 296 | 2 | 234 | 1.05e-16 | 78.2 |
| MS.gene069192.t1 | MTR_6g091800 | 22.840 | 324 | 209 | 6 | 5 | 296 | 16 | 330 | 1.96e-16 | 79.0 |
| MS.gene069192.t1 | MTR_5g073040 | 28.094 | 299 | 178 | 12 | 8 | 294 | 39 | 312 | 2.48e-16 | 78.2 |
| MS.gene069192.t1 | MTR_8g096050 | 26.578 | 301 | 190 | 8 | 5 | 296 | 224 | 502 | 5.29e-16 | 78.6 |
| MS.gene069192.t1 | MTR_1g097890 | 31.156 | 199 | 106 | 5 | 96 | 293 | 38 | 206 | 6.31e-16 | 77.0 |
| MS.gene069192.t1 | MTR_1g097890 | 31.606 | 193 | 113 | 4 | 8 | 200 | 132 | 305 | 1.31e-14 | 73.2 |
| MS.gene069192.t1 | MTR_1g097890 | 27.715 | 267 | 152 | 9 | 10 | 273 | 53 | 281 | 7.72e-13 | 68.2 |
| MS.gene069192.t1 | MTR_8g092080 | 31.000 | 200 | 107 | 5 | 95 | 293 | 38 | 207 | 1.62e-15 | 75.9 |
| MS.gene069192.t1 | MTR_8g092080 | 27.338 | 278 | 157 | 11 | 3 | 273 | 43 | 282 | 1.20e-12 | 67.8 |
| MS.gene069192.t1 | MTR_8g092080 | 29.064 | 203 | 125 | 4 | 8 | 210 | 133 | 316 | 9.72e-12 | 65.1 |
| MS.gene069192.t1 | MTR_1g088995 | 27.562 | 283 | 179 | 8 | 21 | 297 | 46 | 308 | 6.55e-15 | 73.9 |
| MS.gene069192.t1 | MTR_6g091800 | 25.311 | 241 | 166 | 5 | 5 | 240 | 16 | 247 | 1.30e-14 | 72.8 |
| MS.gene069192.t1 | MTR_4g018750 | 27.225 | 191 | 126 | 4 | 117 | 296 | 17 | 205 | 1.58e-14 | 72.8 |
| MS.gene069192.t1 | MTR_4g018750 | 29.339 | 242 | 145 | 10 | 24 | 255 | 31 | 256 | 1.69e-14 | 72.8 |
| MS.gene069192.t1 | MTR_4g119770 | 26.070 | 257 | 157 | 7 | 7 | 240 | 13 | 259 | 1.87e-14 | 72.0 |
| MS.gene069192.t1 | MTR_4g119770 | 26.368 | 201 | 131 | 6 | 104 | 290 | 7 | 204 | 3.30e-12 | 65.9 |
| MS.gene069192.t1 | MTR_6g091800 | 25.311 | 241 | 166 | 5 | 5 | 240 | 16 | 247 | 2.76e-14 | 72.0 |
| MS.gene069192.t1 | MTR_7g064980 | 26.131 | 199 | 134 | 4 | 3 | 200 | 129 | 315 | 2.84e-14 | 72.4 |
| MS.gene069192.t1 | MTR_7g015870 | 26.644 | 289 | 177 | 11 | 23 | 293 | 40 | 311 | 3.55e-14 | 72.0 |
| MS.gene069192.t1 | MTR_3g100570 | 27.536 | 207 | 123 | 5 | 4 | 199 | 120 | 310 | 4.17e-14 | 71.6 |
| MS.gene069192.t1 | MTR_3g100570 | 23.718 | 312 | 199 | 8 | 14 | 296 | 9 | 310 | 1.96e-12 | 67.0 |
| MS.gene069192.t1 | MTR_7g015870 | 26.923 | 286 | 174 | 11 | 23 | 290 | 36 | 304 | 7.33e-14 | 71.2 |
| MS.gene069192.t1 | MTR_5g081910 | 24.919 | 309 | 195 | 9 | 20 | 296 | 20 | 323 | 2.38e-13 | 69.7 |
| MS.gene069192.t1 | MTR_6g091800 | 22.408 | 299 | 191 | 6 | 5 | 271 | 16 | 305 | 5.81e-13 | 68.6 |
| MS.gene069192.t1 | MTR_2g032610 | 23.793 | 290 | 193 | 9 | 17 | 291 | 38 | 314 | 7.60e-13 | 68.2 |
| MS.gene069192.t1 | MTR_7g068340 | 26.705 | 176 | 119 | 3 | 121 | 296 | 100 | 265 | 8.36e-13 | 68.6 |
| MS.gene069192.t1 | MTR_7g068340 | 24.014 | 279 | 183 | 9 | 24 | 297 | 103 | 357 | 2.88e-12 | 67.0 |
| MS.gene069192.t1 | MTR_6g092210 | 24.409 | 254 | 179 | 6 | 47 | 296 | 2 | 246 | 1.09e-12 | 67.0 |
| MS.gene069192.t1 | MTR_8g068890 | 26.688 | 311 | 193 | 10 | 14 | 296 | 9 | 312 | 1.83e-12 | 67.0 |
| MS.gene069192.t1 | MTR_8g036880 | 26.389 | 288 | 192 | 9 | 2 | 279 | 96 | 373 | 2.11e-12 | 67.4 |
| MS.gene069192.t1 | MTR_5g032420 | 24.299 | 321 | 195 | 9 | 14 | 296 | 9 | 319 | 3.69e-12 | 66.2 |
| MS.gene069192.t1 | MTR_3g028590 | 26.502 | 283 | 187 | 9 | 7 | 279 | 96 | 367 | 4.07e-12 | 66.6 |
| MS.gene069192.t1 | MTR_3g028590 | 26.502 | 283 | 187 | 9 | 7 | 279 | 92 | 363 | 4.10e-12 | 66.6 |
| MS.gene069192.t1 | MTR_6g015860 | 24.390 | 287 | 186 | 10 | 23 | 293 | 32 | 303 | 1.07e-11 | 64.7 |
| MS.gene069192.t1 | MTR_5g081150 | 28.218 | 202 | 130 | 5 | 3 | 200 | 132 | 322 | 2.23e-11 | 63.9 |
| MS.gene069192.t1 | MTR_4g078545 | 25.939 | 293 | 197 | 10 | 7 | 290 | 74 | 355 | 2.96e-11 | 63.9 |
| MS.gene069192.t1 | MTR_8g086070 | 29.433 | 282 | 156 | 14 | 14 | 279 | 24 | 278 | 3.29e-11 | 63.2 |
| MS.gene069192.t1 | MTR_6g091800 | 23.019 | 265 | 166 | 5 | 5 | 240 | 16 | 271 | 3.47e-11 | 63.2 |
| MS.gene069192.t1 | MTR_3g074490 | 26.316 | 266 | 163 | 8 | 51 | 296 | 151 | 403 | 4.41e-11 | 63.5 |
| MS.gene069192.t1 | MTR_7g084400 | 26.562 | 192 | 125 | 3 | 106 | 294 | 205 | 383 | 5.38e-11 | 63.2 |
| MS.gene069192.t1 | MTR_6g091800 | 23.019 | 265 | 166 | 5 | 5 | 240 | 16 | 271 | 6.00e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069192.t1 | AT5G46800 | 75.667 | 300 | 70 | 1 | 1 | 297 | 1 | 300 | 1.47e-170 | 474 |
| MS.gene069192.t1 | AT5G46800 | 75.667 | 300 | 70 | 1 | 1 | 297 | 1 | 300 | 1.47e-170 | 474 |
| MS.gene069192.t1 | AT5G46800 | 75.667 | 300 | 70 | 1 | 1 | 297 | 1 | 300 | 1.47e-170 | 474 |
| MS.gene069192.t1 | AT2G33820 | 35.430 | 302 | 175 | 7 | 6 | 297 | 16 | 307 | 1.71e-49 | 166 |
| MS.gene069192.t1 | AT2G33820 | 25.854 | 205 | 138 | 6 | 95 | 293 | 5 | 201 | 1.28e-11 | 64.7 |
| MS.gene069192.t1 | AT2G33820 | 34.516 | 310 | 175 | 8 | 6 | 297 | 16 | 315 | 1.47e-46 | 159 |
| MS.gene069192.t1 | AT1G79900 | 32.374 | 278 | 161 | 6 | 22 | 296 | 30 | 283 | 2.52e-38 | 137 |
| MS.gene069192.t1 | AT2G33820 | 33.600 | 250 | 145 | 7 | 6 | 243 | 16 | 256 | 2.08e-34 | 126 |
| MS.gene069192.t1 | AT2G33820 | 25.854 | 205 | 138 | 6 | 95 | 293 | 5 | 201 | 2.00e-11 | 63.5 |
| MS.gene069192.t1 | AT2G33820 | 35.088 | 228 | 130 | 6 | 80 | 297 | 7 | 226 | 1.57e-32 | 120 |
| MS.gene069192.t1 | AT4G01100 | 28.037 | 321 | 193 | 8 | 3 | 297 | 37 | 345 | 2.26e-28 | 112 |
| MS.gene069192.t1 | AT4G01100 | 27.463 | 335 | 191 | 8 | 3 | 297 | 37 | 359 | 3.48e-27 | 109 |
| MS.gene069192.t1 | AT4G01100 | 28.333 | 300 | 177 | 8 | 24 | 297 | 8 | 295 | 5.24e-27 | 107 |
| MS.gene069192.t1 | AT5G48970 | 27.692 | 325 | 189 | 9 | 7 | 296 | 21 | 334 | 7.50e-27 | 107 |
| MS.gene069192.t1 | AT1G25380 | 29.927 | 274 | 177 | 8 | 24 | 291 | 37 | 301 | 1.91e-25 | 104 |
| MS.gene069192.t1 | AT1G25380 | 29.927 | 274 | 177 | 8 | 24 | 291 | 37 | 301 | 1.91e-25 | 104 |
| MS.gene069192.t1 | AT5G58970 | 31.560 | 282 | 169 | 10 | 24 | 296 | 32 | 298 | 4.64e-24 | 99.8 |
| MS.gene069192.t1 | AT5G58970 | 28.358 | 201 | 127 | 5 | 1 | 198 | 111 | 297 | 1.12e-16 | 79.0 |
| MS.gene069192.t1 | AT5G58970 | 25.980 | 204 | 143 | 4 | 98 | 296 | 6 | 206 | 1.28e-14 | 73.2 |
| MS.gene069192.t1 | AT3G21390 | 26.101 | 318 | 192 | 6 | 7 | 291 | 18 | 325 | 3.11e-23 | 97.8 |
| MS.gene069192.t1 | AT3G54110 | 31.541 | 279 | 167 | 10 | 24 | 293 | 31 | 294 | 4.30e-23 | 97.1 |
| MS.gene069192.t1 | AT3G54110 | 27.861 | 201 | 131 | 3 | 1 | 199 | 109 | 297 | 7.44e-17 | 79.7 |
| MS.gene069192.t1 | AT3G54110 | 28.500 | 200 | 134 | 4 | 102 | 296 | 9 | 204 | 1.51e-15 | 75.9 |
| MS.gene069192.t1 | AT3G21390 | 26.101 | 318 | 192 | 6 | 7 | 291 | 40 | 347 | 5.03e-23 | 97.8 |
| MS.gene069192.t1 | AT2G47490 | 27.076 | 277 | 189 | 7 | 24 | 296 | 33 | 300 | 4.80e-22 | 94.4 |
| MS.gene069192.t1 | AT4G11440 | 26.599 | 297 | 185 | 8 | 10 | 297 | 332 | 604 | 5.48e-22 | 96.3 |
| MS.gene069192.t1 | AT4G11440 | 26.599 | 297 | 185 | 8 | 10 | 297 | 332 | 604 | 5.48e-22 | 96.3 |
| MS.gene069192.t1 | AT5G66380 | 26.421 | 299 | 194 | 9 | 6 | 290 | 8 | 294 | 1.85e-21 | 92.4 |
| MS.gene069192.t1 | AT5G66380 | 26.415 | 212 | 137 | 7 | 5 | 207 | 107 | 308 | 1.70e-14 | 72.8 |
| MS.gene069192.t1 | AT5G01340 | 29.617 | 287 | 176 | 10 | 10 | 286 | 19 | 289 | 6.14e-21 | 91.3 |
| MS.gene069192.t1 | AT5G01340 | 31.250 | 176 | 111 | 5 | 19 | 191 | 123 | 291 | 2.87e-16 | 78.2 |
| MS.gene069192.t1 | AT1G14140 | 25.362 | 276 | 196 | 6 | 21 | 293 | 29 | 297 | 2.24e-20 | 89.4 |
| MS.gene069192.t1 | AT1G14140 | 33.696 | 184 | 106 | 7 | 117 | 293 | 28 | 202 | 2.60e-14 | 72.4 |
| MS.gene069192.t1 | AT1G14140 | 27.919 | 197 | 129 | 5 | 6 | 201 | 117 | 301 | 3.71e-11 | 63.2 |
| MS.gene069192.t1 | AT5G48970 | 26.007 | 273 | 165 | 7 | 50 | 296 | 2 | 263 | 2.09e-19 | 86.3 |
| MS.gene069192.t1 | AT5G61810 | 27.667 | 300 | 180 | 9 | 5 | 296 | 62 | 332 | 4.56e-19 | 86.3 |
| MS.gene069192.t1 | AT4G32400 | 26.421 | 299 | 187 | 7 | 6 | 296 | 112 | 385 | 4.72e-19 | 87.0 |
| MS.gene069192.t1 | AT1G07030 | 28.620 | 297 | 180 | 10 | 8 | 294 | 40 | 314 | 4.79e-19 | 86.3 |
| MS.gene069192.t1 | AT2G37890 | 26.578 | 301 | 200 | 5 | 6 | 296 | 43 | 332 | 6.13e-19 | 85.9 |
| MS.gene069192.t1 | AT2G37890 | 27.094 | 203 | 137 | 4 | 2 | 204 | 146 | 337 | 2.15e-14 | 72.8 |
| MS.gene069192.t1 | AT1G14560 | 25.850 | 294 | 181 | 9 | 24 | 296 | 43 | 320 | 2.19e-18 | 84.3 |
| MS.gene069192.t1 | AT5G61810 | 27.852 | 298 | 182 | 9 | 5 | 296 | 205 | 475 | 2.84e-18 | 85.1 |
| MS.gene069192.t1 | AT1G74240 | 27.445 | 317 | 194 | 10 | 4 | 296 | 32 | 336 | 5.44e-18 | 83.6 |
| MS.gene069192.t1 | AT5G42130 | 28.159 | 277 | 172 | 5 | 24 | 293 | 134 | 390 | 1.30e-17 | 82.8 |
| MS.gene069192.t1 | AT1G34065 | 33.500 | 200 | 114 | 5 | 8 | 207 | 156 | 336 | 1.62e-17 | 82.0 |
| MS.gene069192.t1 | AT1G34065 | 30.412 | 194 | 99 | 5 | 103 | 293 | 70 | 230 | 3.85e-13 | 69.3 |
| MS.gene069192.t1 | AT1G34065 | 28.464 | 267 | 145 | 11 | 14 | 273 | 78 | 305 | 3.19e-12 | 66.6 |
| MS.gene069192.t1 | AT1G34065 | 33.500 | 200 | 114 | 5 | 8 | 207 | 163 | 343 | 1.77e-17 | 82.0 |
| MS.gene069192.t1 | AT1G34065 | 30.890 | 191 | 96 | 5 | 106 | 293 | 80 | 237 | 4.12e-13 | 69.3 |
| MS.gene069192.t1 | AT1G34065 | 28.464 | 267 | 145 | 11 | 14 | 273 | 85 | 312 | 3.59e-12 | 66.6 |
| MS.gene069192.t1 | AT1G74240 | 27.517 | 298 | 180 | 10 | 23 | 296 | 3 | 288 | 4.78e-17 | 80.5 |
| MS.gene069192.t1 | AT2G30160 | 26.667 | 300 | 185 | 10 | 8 | 294 | 42 | 319 | 7.26e-17 | 80.1 |
| MS.gene069192.t1 | AT5G51050 | 26.621 | 293 | 191 | 7 | 8 | 296 | 223 | 495 | 2.39e-16 | 79.3 |
| MS.gene069192.t1 | AT4G26180 | 25.000 | 308 | 199 | 10 | 5 | 296 | 18 | 309 | 1.28e-15 | 76.3 |
| MS.gene069192.t1 | AT3G55640 | 24.262 | 305 | 196 | 8 | 3 | 290 | 33 | 319 | 1.49e-15 | 76.3 |
| MS.gene069192.t1 | AT3G55640 | 27.749 | 191 | 125 | 6 | 7 | 196 | 144 | 322 | 2.13e-13 | 70.1 |
| MS.gene069192.t1 | AT3G55640 | 28.351 | 194 | 127 | 5 | 107 | 294 | 37 | 224 | 3.17e-11 | 63.5 |
| MS.gene069192.t1 | AT3G55640 | 24.262 | 305 | 196 | 8 | 3 | 290 | 33 | 319 | 1.49e-15 | 76.3 |
| MS.gene069192.t1 | AT3G55640 | 27.749 | 191 | 125 | 6 | 7 | 196 | 144 | 322 | 2.13e-13 | 70.1 |
| MS.gene069192.t1 | AT3G55640 | 28.351 | 194 | 127 | 5 | 107 | 294 | 37 | 224 | 3.17e-11 | 63.5 |
| MS.gene069192.t1 | AT1G14560 | 25.651 | 269 | 163 | 9 | 24 | 271 | 43 | 295 | 5.78e-15 | 74.3 |
| MS.gene069192.t1 | AT5G58970 | 25.980 | 204 | 143 | 4 | 98 | 296 | 6 | 206 | 7.90e-15 | 73.6 |
| MS.gene069192.t1 | AT5G58970 | 32.044 | 181 | 112 | 5 | 24 | 199 | 32 | 206 | 3.97e-14 | 71.2 |
| MS.gene069192.t1 | AT4G39460 | 30.035 | 283 | 143 | 11 | 3 | 273 | 49 | 288 | 1.02e-14 | 73.9 |
| MS.gene069192.t1 | AT4G39460 | 29.949 | 197 | 107 | 5 | 95 | 290 | 44 | 210 | 1.22e-13 | 70.5 |
| MS.gene069192.t1 | AT4G39460 | 29.534 | 193 | 117 | 4 | 8 | 200 | 139 | 312 | 7.73e-12 | 65.5 |
| MS.gene069192.t1 | AT4G39460 | 30.035 | 283 | 143 | 11 | 3 | 273 | 49 | 288 | 1.02e-14 | 73.9 |
| MS.gene069192.t1 | AT4G39460 | 29.949 | 197 | 107 | 5 | 95 | 290 | 44 | 210 | 1.22e-13 | 70.5 |
| MS.gene069192.t1 | AT4G39460 | 29.534 | 193 | 117 | 4 | 8 | 200 | 139 | 312 | 7.73e-12 | 65.5 |
| MS.gene069192.t1 | AT4G39460 | 30.035 | 283 | 143 | 11 | 3 | 273 | 49 | 288 | 1.02e-14 | 73.9 |
| MS.gene069192.t1 | AT4G39460 | 29.949 | 197 | 107 | 5 | 95 | 290 | 44 | 210 | 1.22e-13 | 70.5 |
| MS.gene069192.t1 | AT4G39460 | 29.534 | 193 | 117 | 4 | 8 | 200 | 139 | 312 | 7.73e-12 | 65.5 |
| MS.gene069192.t1 | AT3G53940 | 27.136 | 199 | 132 | 6 | 3 | 200 | 175 | 361 | 1.09e-14 | 73.9 |
| MS.gene069192.t1 | AT3G53940 | 25.490 | 306 | 197 | 9 | 6 | 296 | 71 | 360 | 1.35e-14 | 73.6 |
| MS.gene069192.t1 | AT4G24570 | 28.302 | 318 | 177 | 13 | 14 | 296 | 9 | 310 | 1.66e-14 | 73.2 |
| MS.gene069192.t1 | AT4G24570 | 26.000 | 200 | 131 | 5 | 3 | 199 | 125 | 310 | 5.55e-11 | 62.8 |
| MS.gene069192.t1 | AT5G07320 | 24.820 | 278 | 180 | 8 | 24 | 297 | 225 | 477 | 1.75e-14 | 73.9 |
| MS.gene069192.t1 | AT5G13490 | 27.178 | 287 | 189 | 9 | 3 | 279 | 83 | 359 | 1.43e-13 | 70.9 |
| MS.gene069192.t1 | AT5G13490 | 27.178 | 287 | 189 | 9 | 3 | 279 | 83 | 359 | 1.43e-13 | 70.9 |
| MS.gene069192.t1 | AT5G15640 | 23.958 | 288 | 188 | 9 | 23 | 293 | 36 | 309 | 1.46e-13 | 70.5 |
| MS.gene069192.t1 | AT5G15640 | 24.211 | 285 | 185 | 9 | 23 | 290 | 43 | 313 | 1.67e-13 | 70.1 |
| MS.gene069192.t1 | AT5G56450 | 24.026 | 308 | 205 | 12 | 6 | 297 | 32 | 326 | 3.50e-13 | 69.3 |
| MS.gene069192.t1 | AT3G51870 | 24.199 | 281 | 186 | 9 | 21 | 297 | 104 | 361 | 7.29e-13 | 68.6 |
| MS.gene069192.t1 | AT4G26180 | 25.088 | 283 | 180 | 10 | 5 | 271 | 18 | 284 | 8.85e-13 | 67.8 |
| MS.gene069192.t1 | AT1G14560 | 26.829 | 205 | 127 | 5 | 108 | 296 | 25 | 222 | 9.60e-13 | 67.0 |
| MS.gene069192.t1 | AT1G14560 | 23.902 | 205 | 138 | 6 | 7 | 199 | 24 | 222 | 9.34e-11 | 61.2 |
| MS.gene069192.t1 | AT5G64970 | 27.037 | 270 | 158 | 8 | 50 | 296 | 45 | 298 | 1.22e-12 | 67.4 |
| MS.gene069192.t1 | AT5G01500 | 24.820 | 278 | 188 | 7 | 21 | 297 | 132 | 389 | 1.97e-12 | 67.4 |
| MS.gene069192.t1 | AT5G64970 | 27.037 | 270 | 158 | 8 | 50 | 296 | 169 | 422 | 2.44e-12 | 67.4 |
| MS.gene069192.t1 | AT2G39970 | 25.246 | 305 | 185 | 13 | 20 | 290 | 20 | 315 | 4.35e-12 | 66.2 |
| MS.gene069192.t1 | AT2G22500 | 28.272 | 191 | 105 | 7 | 21 | 198 | 136 | 307 | 7.54e-12 | 65.1 |
| MS.gene069192.t1 | AT5G17400 | 24.138 | 261 | 187 | 7 | 24 | 279 | 30 | 284 | 8.07e-12 | 65.1 |
| MS.gene069192.t1 | AT3G08580 | 25.784 | 287 | 193 | 9 | 3 | 279 | 79 | 355 | 1.68e-11 | 64.7 |
| MS.gene069192.t1 | AT3G08580 | 25.784 | 287 | 193 | 9 | 3 | 279 | 79 | 355 | 1.68e-11 | 64.7 |
| MS.gene069192.t1 | AT3G55640 | 28.351 | 194 | 127 | 5 | 107 | 294 | 37 | 224 | 1.96e-11 | 63.5 |
| MS.gene069192.t1 | AT3G55640 | 28.351 | 194 | 127 | 5 | 107 | 294 | 37 | 224 | 1.96e-11 | 63.5 |
| MS.gene069192.t1 | AT5G09470 | 27.835 | 194 | 126 | 4 | 8 | 199 | 151 | 332 | 4.92e-11 | 63.2 |
Find 88 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGTTCAATTGATGCTTTC+AGG | 0.065790 | 5.3:-19637934 | MS.gene069192:CDS |
| GCTTTGGAGCTTGACCTTTA+TGG | 0.202406 | 5.3:+19639410 | None:intergenic |
| CAACCTGCTGATTTATTGTT+AGG | 0.246247 | 5.3:+19639187 | None:intergenic |
| TGCCAATGCAGCATGTTTCT+TGG | 0.253985 | 5.3:-19637840 | MS.gene069192:CDS |
| AGAGGTTCTCTGATGCTTTC+CGG | 0.300203 | 5.3:-19638052 | MS.gene069192:CDS |
| AAAGGTCTTTATAAGGGTTT+TGG | 0.303125 | 5.3:-19637887 | MS.gene069192:CDS |
| ATGCTTTCCGGAGGCTTGGC+TGG | 0.311514 | 5.3:-19638040 | MS.gene069192:CDS |
| CCAAACATTGCGGCATTTCC+AGG | 0.322024 | 5.3:+19638133 | None:intergenic |
| AAATCAGAAGGTGGCGTAAA+AGG | 0.329776 | 5.3:-19638196 | MS.gene069192:CDS |
| AAAGCTACTGAAGGGTTTAA+AGG | 0.332217 | 5.3:-19637905 | MS.gene069192:CDS |
| AGGGTTTAAAGGTCTTTATA+AGG | 0.342100 | 5.3:-19637894 | MS.gene069192:CDS |
| TCAATTGCACCGGAATATTT+CGG | 0.343305 | 5.3:+19639360 | None:intergenic |
| GTTGTTTGTGGAGCTGCAGC+TGG | 0.347812 | 5.3:-19639168 | MS.gene069192:CDS |
| GACCTTACTGCTGGAACTAT+TGG | 0.348951 | 5.3:-19639471 | MS.gene069192:CDS |
| GAAGTGGTGTAGGCTGGCTT+TGG | 0.378224 | 5.3:+19639394 | None:intergenic |
| GCTGTCCTGTTTACAGTTAG+AGG | 0.393198 | 5.3:-19639249 | MS.gene069192:CDS |
| CAAGGGGTTAGTTCCCACTA+TGG | 0.403546 | 5.3:-19638167 | MS.gene069192:CDS |
| TCAATTGAACCAGAAAACTT+TGG | 0.403615 | 5.3:+19637944 | None:intergenic |
| TTCAGTAGGGCAAGCTAGAA+AGG | 0.416209 | 5.3:+19639134 | None:intergenic |
| TCTGATGCTTTCCGGAGGCT+TGG | 0.423725 | 5.3:-19638044 | MS.gene069192:CDS |
| GCCTACACCACTTCCTGGTC+AGG | 0.425760 | 5.3:-19639385 | MS.gene069192:CDS |
| CCTGGAAATGCCGCAATGTT+TGG | 0.431845 | 5.3:-19638133 | MS.gene069192:CDS |
| GGGTTTAAAGGTCTTTATAA+GGG | 0.432443 | 5.3:-19637893 | MS.gene069192:CDS |
| GGTCAGGTTCCGAAATATTC+CGG | 0.433881 | 5.3:-19639369 | MS.gene069192:CDS |
| GGAACACTTCTGCACATTGC+AGG | 0.434706 | 5.3:+19637863 | None:intergenic |
| GTTTACAGTTAGAGGGCAAA+TGG | 0.443517 | 5.3:-19639241 | MS.gene069192:CDS |
| GCAACAAAGCAATTAATTGC+AGG | 0.446536 | 5.3:-19638100 | MS.gene069192:CDS |
| GAGATGACAAGATCAGCTTT+AGG | 0.446594 | 5.3:-19637812 | MS.gene069192:CDS |
| TTCTGATTTGAGAACATGTC+TGG | 0.450563 | 5.3:+19638210 | None:intergenic |
| ATAAATCAGCAGGTTGTTTG+TGG | 0.457408 | 5.3:-19639180 | MS.gene069192:CDS |
| TCATCCATTTGACACCATAA+AGG | 0.457483 | 5.3:-19639424 | MS.gene069192:CDS |
| TTTGCCCTCTAACTGTAAAC+AGG | 0.465311 | 5.3:+19639244 | None:intergenic |
| AGCCAGCCTACACCACTTCC+TGG | 0.475356 | 5.3:-19639390 | MS.gene069192:CDS |
| AAGAAACATGCTGCATTGGC+AGG | 0.482397 | 5.3:+19637842 | None:intergenic |
| TGGCGGATTATACAAAGGTA+TGG | 0.483651 | 5.3:-19639304 | MS.gene069192:CDS |
| CTCCAATAGTTCCAGCAGTA+AGG | 0.497657 | 5.3:+19639469 | None:intergenic |
| AGGTATTTCACGTGCCATAG+TGG | 0.503932 | 5.3:+19638153 | None:intergenic |
| TGTAAACAGGACAGCATTGA+AGG | 0.507591 | 5.3:+19639257 | None:intergenic |
| GACCAGGAAGTGGTGTAGGC+TGG | 0.508905 | 5.3:+19639388 | None:intergenic |
| TTGACCTTTATGGTGTCAAA+TGG | 0.512260 | 5.3:+19639420 | None:intergenic |
| CAAGCACAGAGTGCACTAGC+TGG | 0.514236 | 5.3:-19638283 | MS.gene069192:CDS |
| CAGAGTGCACTAGCTGGATC+AGG | 0.515504 | 5.3:-19638277 | MS.gene069192:CDS |
| AGCAGCTCCAGCCAAGCCTC+CGG | 0.518143 | 5.3:+19638033 | None:intergenic |
| TGCCAAGAAACATGCTGCAT+TGG | 0.518948 | 5.3:+19637838 | None:intergenic |
| CTGCATTTGATAAGTTCAGT+AGG | 0.523172 | 5.3:+19639120 | None:intergenic |
| CTACTGAACTTATCAAATGC+AGG | 0.524614 | 5.3:-19639119 | MS.gene069192:intron |
| ACAATAGCAGCTGAAGGTCC+TGG | 0.526382 | 5.3:-19639324 | MS.gene069192:CDS |
| GAATATTTCGGAACCTGACC+AGG | 0.532901 | 5.3:+19639372 | None:intergenic |
| GTGGCTAAGGACCTTACTGC+TGG | 0.535312 | 5.3:-19639480 | MS.gene069192:CDS |
| AGGAGGATAAAAGCTACTGA+AGG | 0.536760 | 5.3:-19637914 | MS.gene069192:CDS |
| TGTCCTAACAATAAATCAGC+AGG | 0.538000 | 5.3:-19639190 | MS.gene069192:CDS |
| CTTACTGCTGGAACTATTGG+AGG | 0.538872 | 5.3:-19639468 | MS.gene069192:CDS |
| ACACTCTTAATAACATCAGT+TGG | 0.538878 | 5.3:+19637992 | None:intergenic |
| GCAACATTGGCAGTGAAATA+CGG | 0.540088 | 5.3:-19638250 | MS.gene069192:CDS |
| TCAGATGGGAGACGTGGCTA+AGG | 0.549312 | 5.3:-19639493 | None:intergenic |
| GGGGCAGCACAACTGATAGT+TGG | 0.550601 | 5.3:-19639447 | MS.gene069192:CDS |
| CTTGACAGCATCAATTGCAC+CGG | 0.554392 | 5.3:+19639350 | None:intergenic |
| CTGTCCTGTTTACAGTTAGA+GGG | 0.554693 | 5.3:-19639248 | MS.gene069192:CDS |
| TGGATCAGGAACAGCAACAT+TGG | 0.556451 | 5.3:-19638263 | MS.gene069192:CDS |
| TTCGGAACCTGACCAGGAAG+TGG | 0.558819 | 5.3:+19639378 | None:intergenic |
| GATACCTCTGAACTCGGTAG+AGG | 0.574095 | 5.3:-19638070 | MS.gene069192:CDS |
| ACTATGGCACGTGAAATACC+TGG | 0.576915 | 5.3:-19638151 | MS.gene069192:CDS |
| GGCGGATTATACAAAGGTAT+GGG | 0.578799 | 5.3:-19639303 | MS.gene069192:CDS |
| TGCATTTGATAAGTTCAGTA+GGG | 0.581238 | 5.3:+19639121 | None:intergenic |
| ATACCTTTGTATAATCCGCC+AGG | 0.581891 | 5.3:+19639306 | None:intergenic |
| TTTATTGTTAGGACATCACC+AGG | 0.584505 | 5.3:+19639198 | None:intergenic |
| GGAGGATAAAAGCTACTGAA+GGG | 0.589896 | 5.3:-19637913 | MS.gene069192:CDS |
| ACATGTCTGGCTACATCCAT+CGG | 0.595686 | 5.3:+19638223 | None:intergenic |
| TTACTGCTGGAACTATTGGA+GGG | 0.599716 | 5.3:-19639467 | MS.gene069192:CDS |
| GGTATTTCACGTGCCATAGT+GGG | 0.600380 | 5.3:+19638154 | None:intergenic |
| TCTACCGAGTTCAGAGGTAT+CGG | 0.601498 | 5.3:+19638072 | None:intergenic |
| TTCATATACACCAAACATTG+CGG | 0.607181 | 5.3:+19638123 | None:intergenic |
| GCATTGTTGAAGTCACATCC+TGG | 0.614885 | 5.3:-19639216 | MS.gene069192:CDS |
| AGACATGTTCTCAAATCAGA+AGG | 0.616745 | 5.3:-19638208 | MS.gene069192:CDS |
| AAGAAGACAATAGCAGCTGA+AGG | 0.629491 | 5.3:-19639330 | MS.gene069192:CDS |
| TACTGCTGGAACTATTGGAG+GGG | 0.632313 | 5.3:-19639466 | MS.gene069192:CDS |
| ACCTGACCAGGAAGTGGTGT+AGG | 0.636499 | 5.3:+19639384 | None:intergenic |
| GTTCAATTGATGCTTTCAGG+AGG | 0.640152 | 5.3:-19637931 | MS.gene069192:CDS |
| AAGGCAGCTACTGTAGCAAG+TGG | 0.649682 | 5.3:+19639276 | None:intergenic |
| AGAACCTCTACCGAGTTCAG+AGG | 0.650113 | 5.3:+19638066 | None:intergenic |
| CATGTTCTCAAATCAGAAGG+TGG | 0.651093 | 5.3:-19638205 | MS.gene069192:CDS |
| GGCACCGATACCTCTGAACT+CGG | 0.657541 | 5.3:-19638076 | MS.gene069192:CDS |
| ACAAAGCAATTAATTGCAGG+AGG | 0.657726 | 5.3:-19638097 | MS.gene069192:CDS |
| AGTGAAATACGGTGGACCGA+TGG | 0.659920 | 5.3:-19638239 | MS.gene069192:CDS |
| GGTTCTCTGATGCTTTCCGG+AGG | 0.681688 | 5.3:-19638049 | MS.gene069192:CDS |
| GGTCCTGGCGGATTATACAA+AGG | 0.698858 | 5.3:-19639309 | MS.gene069192:CDS |
| ACATTGGCAGTGAAATACGG+TGG | 0.717423 | 5.3:-19638247 | MS.gene069192:CDS |
| ATAGCAGCTGAAGGTCCTGG+CGG | 0.735146 | 5.3:-19639321 | MS.gene069192:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATGTGAAATGTAAATTT+AGG | + | chr5.3:19638917-19638936 | None:intergenic | 15.0% |
| !! | AAATATAATCATTTCTCTCA+TGG | - | chr5.3:19638820-19638839 | MS.gene069192:intron | 20.0% |
| !! | TAACAAAGAACAATAAACAA+AGG | + | chr5.3:19638338-19638357 | None:intergenic | 20.0% |
| !!! | CTTTTATTAATTTTGAACCA+GGG | + | chr5.3:19638467-19638486 | None:intergenic | 20.0% |
| !!! | TCTTTTATTAATTTTGAACC+AGG | + | chr5.3:19638468-19638487 | None:intergenic | 20.0% |
| ! | TGTTCTAACAATATCTCTAT+GGG | + | chr5.3:19638440-19638459 | None:intergenic | 25.0% |
| ! | TTTGACTATATACATCTGTT+GGG | + | chr5.3:19638671-19638690 | None:intergenic | 25.0% |
| !! | TACAAAAATCCAAAGTTTTC+TGG | - | chr5.3:19639344-19639363 | MS.gene069192:CDS | 25.0% |
| !!! | TTTTGACTATATACATCTGT+TGG | + | chr5.3:19638672-19638691 | None:intergenic | 25.0% |
| AATAGTCTTTACTCTTCACA+AGG | - | chr5.3:19638690-19638709 | MS.gene069192:intron | 30.0% | |
| AATCTCTGATTCATCTCTTT+AGG | - | chr5.3:19638783-19638802 | MS.gene069192:intron | 30.0% | |
| ACACTCTTAATAACATCAGT+TGG | + | chr5.3:19639308-19639327 | None:intergenic | 30.0% | |
| ACTTTCTATTGTTCAAGCTT+AGG | - | chr5.3:19638567-19638586 | MS.gene069192:intron | 30.0% | |
| AGGGTTTAAAGGTCTTTATA+AGG | - | chr5.3:19639403-19639422 | MS.gene069192:CDS | 30.0% | |
| ATCTAAATCATGGACAAATG+TGG | + | chr5.3:19638382-19638401 | None:intergenic | 30.0% | |
| ATCTCTGATTCATCTCTTTA+GGG | - | chr5.3:19638784-19638803 | MS.gene069192:intron | 30.0% | |
| CTAGAAAGTTATTACATGAC+AGG | + | chr5.3:19638305-19638324 | None:intergenic | 30.0% | |
| CTGTTCTAACAATATCTCTA+TGG | + | chr5.3:19638441-19638460 | None:intergenic | 30.0% | |
| CTTTCTATTGTTCAAGCTTA+GGG | - | chr5.3:19638568-19638587 | MS.gene069192:intron | 30.0% | |
| GGGTTTAAAGGTCTTTATAA+GGG | - | chr5.3:19639404-19639423 | MS.gene069192:CDS | 30.0% | |
| TCAATTGAACCAGAAAACTT+TGG | + | chr5.3:19639356-19639375 | None:intergenic | 30.0% | |
| TGCATTTGATAAGTTCAGTA+GGG | + | chr5.3:19638179-19638198 | None:intergenic | 30.0% | |
| TTCATATACACCAAACATTG+CGG | + | chr5.3:19639177-19639196 | None:intergenic | 30.0% | |
| ! | AAAGGTCTTTATAAGGGTTT+TGG | - | chr5.3:19639410-19639429 | MS.gene069192:CDS | 30.0% |
| ! | GATTACTAGAATCTGAGATT+AGG | + | chr5.3:19638767-19638786 | None:intergenic | 30.0% |
| ! | GCTCATAATTTACTGATTAG+TGG | + | chr5.3:19638644-19638663 | None:intergenic | 30.0% |
| ! | TTATTAATTTTGAACCAGGG+TGG | + | chr5.3:19638464-19638483 | None:intergenic | 30.0% |
| AAAGCTACTGAAGGGTTTAA+AGG | - | chr5.3:19639392-19639411 | MS.gene069192:CDS | 35.0% | |
| AAATCATGGACAAATGTGGA+TGG | + | chr5.3:19638378-19638397 | None:intergenic | 35.0% | |
| AATTAAAACACCGTCATCAG+TGG | + | chr5.3:19638211-19638230 | None:intergenic | 35.0% | |
| ACAAAGCAATTAATTGCAGG+AGG | - | chr5.3:19639200-19639219 | MS.gene069192:CDS | 35.0% | |
| AGACATGTTCTCAAATCAGA+AGG | - | chr5.3:19639089-19639108 | MS.gene069192:intron | 35.0% | |
| ATAAATCAGCAGGTTGTTTG+TGG | - | chr5.3:19638117-19638136 | MS.gene069192:CDS | 35.0% | |
| ATCATTTCTCTCATGGTTGA+TGG | - | chr5.3:19638827-19638846 | MS.gene069192:intron | 35.0% | |
| CTACTGAACTTATCAAATGC+AGG | - | chr5.3:19638178-19638197 | MS.gene069192:CDS | 35.0% | |
| CTATATACATCTGTTGGGTA+TGG | + | chr5.3:19638666-19638685 | None:intergenic | 35.0% | |
| CTGCATTTGATAAGTTCAGT+AGG | + | chr5.3:19638180-19638199 | None:intergenic | 35.0% | |
| GCAACAAAGCAATTAATTGC+AGG | - | chr5.3:19639197-19639216 | MS.gene069192:CDS | 35.0% | |
| TCAATTGCACCGGAATATTT+CGG | + | chr5.3:19637940-19637959 | None:intergenic | 35.0% | |
| TCATCCATTTGACACCATAA+AGG | - | chr5.3:19637873-19637892 | MS.gene069192:CDS | 35.0% | |
| TCTCTGATTCATCTCTTTAG+GGG | - | chr5.3:19638785-19638804 | MS.gene069192:intron | 35.0% | |
| TGTCCTAACAATAAATCAGC+AGG | - | chr5.3:19638107-19638126 | MS.gene069192:CDS | 35.0% | |
| TTTATTGTTAGGACATCACC+AGG | + | chr5.3:19638102-19638121 | None:intergenic | 35.0% | |
| TTTGTTACACGATGAATACC+AGG | - | chr5.3:19638988-19639007 | MS.gene069192:intron | 35.0% | |
| ! | CAATAAACAAAGGTTTGCTC+TGG | + | chr5.3:19638328-19638347 | None:intergenic | 35.0% |
| ! | TTCTGATTTGAGAACATGTC+TGG | + | chr5.3:19639090-19639109 | None:intergenic | 35.0% |
| ! | TTGACCTTTATGGTGTCAAA+TGG | + | chr5.3:19637880-19637899 | None:intergenic | 35.0% |
| !! | CAACCTGCTGATTTATTGTT+AGG | + | chr5.3:19638113-19638132 | None:intergenic | 35.0% |
| AAATCAGAAGGTGGCGTAAA+AGG | - | chr5.3:19639101-19639120 | MS.gene069192:intron | 40.0% | |
| AAGAAGACAATAGCAGCTGA+AGG | - | chr5.3:19637967-19637986 | MS.gene069192:CDS | 40.0% | |
| AATAGCTAGTTCAAGTGGCT+AGG | + | chr5.3:19638726-19638745 | None:intergenic | 40.0% | |
| AGGAGGATAAAAGCTACTGA+AGG | - | chr5.3:19639383-19639402 | MS.gene069192:CDS | 40.0% | |
| ATACCTTTGTATAATCCGCC+AGG | + | chr5.3:19637994-19638013 | None:intergenic | 40.0% | |
| CACTTGAACTAGCTATTGGA+CGG | - | chr5.3:19638729-19638748 | MS.gene069192:intron | 40.0% | |
| CATGTTCTCAAATCAGAAGG+TGG | - | chr5.3:19639092-19639111 | MS.gene069192:intron | 40.0% | |
| CTGGTTCAATTGATGCTTTC+AGG | - | chr5.3:19639363-19639382 | MS.gene069192:CDS | 40.0% | |
| CTGTCCTGTTTACAGTTAGA+GGG | - | chr5.3:19638049-19638068 | MS.gene069192:CDS | 40.0% | |
| GAGATGACAAGATCAGCTTT+AGG | - | chr5.3:19639485-19639504 | MS.gene069192:CDS | 40.0% | |
| GCAACATTGGCAGTGAAATA+CGG | - | chr5.3:19639047-19639066 | MS.gene069192:intron | 40.0% | |
| GCAAGTCAGAGTTATTCTCA+TGG | + | chr5.3:19638872-19638891 | None:intergenic | 40.0% | |
| GGAGGATAAAAGCTACTGAA+GGG | - | chr5.3:19639384-19639403 | MS.gene069192:CDS | 40.0% | |
| GGTTTACAAAGCACAACTTG+TGG | - | chr5.3:19638589-19638608 | MS.gene069192:intron | 40.0% | |
| GTTCAATTGATGCTTTCAGG+AGG | - | chr5.3:19639366-19639385 | MS.gene069192:CDS | 40.0% | |
| GTTTACAGTTAGAGGGCAAA+TGG | - | chr5.3:19638056-19638075 | MS.gene069192:CDS | 40.0% | |
| TAGCCACTTGAACTAGCTAT+TGG | - | chr5.3:19638725-19638744 | MS.gene069192:intron | 40.0% | |
| TTACTGCTGGAACTATTGGA+GGG | - | chr5.3:19637830-19637849 | MS.gene069192:CDS | 40.0% | |
| TTTGCCCTCTAACTGTAAAC+AGG | + | chr5.3:19638056-19638075 | None:intergenic | 40.0% | |
| ! | GGCGTAAAAGGTCTTTTCAA+GGG | - | chr5.3:19639113-19639132 | MS.gene069192:intron | 40.0% |
| ! | GTCTAAGACGTATGCATGAT+TGG | + | chr5.3:19638540-19638559 | None:intergenic | 40.0% |
| ! | TGGCGTAAAAGGTCTTTTCA+AGG | - | chr5.3:19639112-19639131 | MS.gene069192:intron | 40.0% |
| ! | TGTAAACAGGACAGCATTGA+AGG | + | chr5.3:19638043-19638062 | None:intergenic | 40.0% |
| !! | CTCTTTAGGGGCTCATTTTA+AGG | - | chr5.3:19638797-19638816 | MS.gene069192:intron | 40.0% |
| !! | GCGTAAAAGGTCTTTTCAAG+GGG | - | chr5.3:19639114-19639133 | MS.gene069192:intron | 40.0% |
| !! | GGCGGATTATACAAAGGTAT+GGG | - | chr5.3:19637994-19638013 | MS.gene069192:CDS | 40.0% |
| !! | TGGCGGATTATACAAAGGTA+TGG | - | chr5.3:19637993-19638012 | MS.gene069192:CDS | 40.0% |
| !!! | TGGAGCTGCTTTTTGGTTTA+TGG | - | chr5.3:19639277-19639296 | MS.gene069192:CDS | 40.0% |
| ACATGTCTGGCTACATCCAT+CGG | + | chr5.3:19639077-19639096 | None:intergenic | 45.0% | |
| ACATTGGCAGTGAAATACGG+TGG | - | chr5.3:19639050-19639069 | MS.gene069192:intron | 45.0% | |
| ACGCTGGGACATCTAAATCA+TGG | + | chr5.3:19638392-19638411 | None:intergenic | 45.0% | |
| ACTATGGCACGTGAAATACC+TGG | - | chr5.3:19639146-19639165 | MS.gene069192:CDS | 45.0% | |
| AGAGGTTCTCTGATGCTTTC+CGG | - | chr5.3:19639245-19639264 | MS.gene069192:CDS | 45.0% | |
| AGGTATTTCACGTGCCATAG+TGG | + | chr5.3:19639147-19639166 | None:intergenic | 45.0% | |
| AGGTTAGATGCCACTGATGA+CGG | - | chr5.3:19638198-19638217 | MS.gene069192:CDS | 45.0% | |
| CGTCCAATAGCTAGTTCAAG+TGG | + | chr5.3:19638731-19638750 | None:intergenic | 45.0% | |
| CTATTGGACGGAGTAGAGTT+AGG | - | chr5.3:19638741-19638760 | MS.gene069192:intron | 45.0% | |
| CTCCAATAGTTCCAGCAGTA+AGG | + | chr5.3:19637831-19637850 | None:intergenic | 45.0% | |
| CTTACTGCTGGAACTATTGG+AGG | - | chr5.3:19637829-19637848 | MS.gene069192:CDS | 45.0% | |
| CTTGACAGCATCAATTGCAC+CGG | + | chr5.3:19637950-19637969 | None:intergenic | 45.0% | |
| GAATATTTCGGAACCTGACC+AGG | + | chr5.3:19637928-19637947 | None:intergenic | 45.0% | |
| GACCTTACTGCTGGAACTAT+TGG | - | chr5.3:19637826-19637845 | MS.gene069192:CDS | 45.0% | |
| GCATTGTTGAAGTCACATCC+TGG | - | chr5.3:19638081-19638100 | MS.gene069192:CDS | 45.0% | |
| GCTGTCCTGTTTACAGTTAG+AGG | - | chr5.3:19638048-19638067 | MS.gene069192:CDS | 45.0% | |
| GGTATTTCACGTGCCATAGT+GGG | + | chr5.3:19639146-19639165 | None:intergenic | 45.0% | |
| GGTCAGGTTCCGAAATATTC+CGG | - | chr5.3:19637928-19637947 | MS.gene069192:CDS | 45.0% | |
| TACTGCTGGAACTATTGGAG+GGG | - | chr5.3:19637831-19637850 | MS.gene069192:CDS | 45.0% | |
| TATTGTTAGAACAGCCACCC+TGG | - | chr5.3:19638447-19638466 | MS.gene069192:intron | 45.0% | |
| TGCCAAGAAACATGCTGCAT+TGG | + | chr5.3:19639462-19639481 | None:intergenic | 45.0% | |
| TGCCAATGCAGCATGTTTCT+TGG | - | chr5.3:19639457-19639476 | MS.gene069192:CDS | 45.0% | |
| TGGATCAGGAACAGCAACAT+TGG | - | chr5.3:19639034-19639053 | MS.gene069192:intron | 45.0% | |
| TTCAGTAGGGCAAGCTAGAA+AGG | + | chr5.3:19638166-19638185 | None:intergenic | 45.0% | |
| ! | AAGAAACATGCTGCATTGGC+AGG | + | chr5.3:19639458-19639477 | None:intergenic | 45.0% |
| ! | TCTACCGAGTTCAGAGGTAT+CGG | + | chr5.3:19639228-19639247 | None:intergenic | 45.0% |
| !! | GCTTTGGAGCTTGACCTTTA+TGG | + | chr5.3:19637890-19637909 | None:intergenic | 45.0% |
| AAGGCAGCTACTGTAGCAAG+TGG | + | chr5.3:19638024-19638043 | None:intergenic | 50.0% | |
| ACAATAGCAGCTGAAGGTCC+TGG | - | chr5.3:19637973-19637992 | MS.gene069192:CDS | 50.0% | |
| ACTCATCCACACGATCGATC+TGG | - | chr5.3:19638618-19638637 | MS.gene069192:intron | 50.0% | |
| AGAACCTCTACCGAGTTCAG+AGG | + | chr5.3:19639234-19639253 | None:intergenic | 50.0% | |
| AGTGAAATACGGTGGACCGA+TGG | - | chr5.3:19639058-19639077 | MS.gene069192:intron | 50.0% | |
| CCAAACATTGCGGCATTTCC+AGG | + | chr5.3:19639167-19639186 | None:intergenic | 50.0% | |
| CCTGGAAATGCCGCAATGTT+TGG | - | chr5.3:19639164-19639183 | MS.gene069192:CDS | 50.0% | |
| GATACCTCTGAACTCGGTAG+AGG | - | chr5.3:19639227-19639246 | MS.gene069192:CDS | 50.0% | |
| GGAACACTTCTGCACATTGC+AGG | + | chr5.3:19639437-19639456 | None:intergenic | 50.0% | |
| !! | CAAGGGGTTAGTTCCCACTA+TGG | - | chr5.3:19639130-19639149 | MS.gene069192:CDS | 50.0% |
| !! | GGTCCTGGCGGATTATACAA+AGG | - | chr5.3:19637988-19638007 | MS.gene069192:CDS | 50.0% |
| ACCTGACCAGGAAGTGGTGT+AGG | + | chr5.3:19637916-19637935 | None:intergenic | 55.0% | |
| ATAGCAGCTGAAGGTCCTGG+CGG | - | chr5.3:19637976-19637995 | MS.gene069192:CDS | 55.0% | |
| CAAGCACAGAGTGCACTAGC+TGG | - | chr5.3:19639014-19639033 | MS.gene069192:intron | 55.0% | |
| CAGAGTGCACTAGCTGGATC+AGG | - | chr5.3:19639020-19639039 | MS.gene069192:intron | 55.0% | |
| GGGGCAGCACAACTGATAGT+TGG | - | chr5.3:19637850-19637869 | MS.gene069192:CDS | 55.0% | |
| GGTTCTCTGATGCTTTCCGG+AGG | - | chr5.3:19639248-19639267 | MS.gene069192:CDS | 55.0% | |
| GTGGCTAAGGACCTTACTGC+TGG | - | chr5.3:19637817-19637836 | MS.gene069192:CDS | 55.0% | |
| GTTGTTTGTGGAGCTGCAGC+TGG | - | chr5.3:19638129-19638148 | MS.gene069192:CDS | 55.0% | |
| TAGTGGCCAGATCGATCGTG+TGG | + | chr5.3:19638627-19638646 | None:intergenic | 55.0% | |
| TCTGATGCTTTCCGGAGGCT+TGG | - | chr5.3:19639253-19639272 | MS.gene069192:CDS | 55.0% | |
| TGCACTCTGTGCTTGCAACC+TGG | + | chr5.3:19639009-19639028 | None:intergenic | 55.0% | |
| TTCGGAACCTGACCAGGAAG+TGG | + | chr5.3:19637922-19637941 | None:intergenic | 55.0% | |
| !! | GAAGTGGTGTAGGCTGGCTT+TGG | + | chr5.3:19637906-19637925 | None:intergenic | 55.0% |
| !! | GGCACCGATACCTCTGAACT+CGG | - | chr5.3:19639221-19639240 | MS.gene069192:CDS | 55.0% |
| !!! | GCTTGGCTGGAGCTGCTTTT+TGG | - | chr5.3:19639270-19639289 | MS.gene069192:CDS | 55.0% |
| ACCTCTCACGCAGACACGCT+GGG | + | chr5.3:19638407-19638426 | None:intergenic | 60.0% | |
| AGCCAGCCTACACCACTTCC+TGG | - | chr5.3:19637907-19637926 | MS.gene069192:CDS | 60.0% | |
| ATGCTTTCCGGAGGCTTGGC+TGG | - | chr5.3:19639257-19639276 | MS.gene069192:CDS | 60.0% | |
| GACCAGGAAGTGGTGTAGGC+TGG | + | chr5.3:19637912-19637931 | None:intergenic | 60.0% | |
| GCCTACACCACTTCCTGGTC+AGG | - | chr5.3:19637912-19637931 | MS.gene069192:CDS | 60.0% | |
| AGCAGCTCCAGCCAAGCCTC+CGG | + | chr5.3:19639267-19639286 | None:intergenic | 65.0% | |
| CACCTCTCACGCAGACACGC+TGG | + | chr5.3:19638408-19638427 | None:intergenic | 65.0% | |
| TCCCAGCGTGTCTGCGTGAG+AGG | - | chr5.3:19638403-19638422 | MS.gene069192:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 19637808 | 19639511 | 19637808 | ID=MS.gene069192 |
| chr5.3 | mRNA | 19637808 | 19639511 | 19637808 | ID=MS.gene069192.t1;Parent=MS.gene069192 |
| chr5.3 | exon | 19639120 | 19639511 | 19639120 | ID=MS.gene069192.t1.exon1;Parent=MS.gene069192.t1 |
| chr5.3 | CDS | 19639120 | 19639511 | 19639120 | ID=cds.MS.gene069192.t1;Parent=MS.gene069192.t1 |
| chr5.3 | exon | 19637808 | 19638309 | 19637808 | ID=MS.gene069192.t1.exon2;Parent=MS.gene069192.t1 |
| chr5.3 | CDS | 19637808 | 19638309 | 19637808 | ID=cds.MS.gene069192.t1;Parent=MS.gene069192.t1 |
| Gene Sequence |
| Protein sequence |
