Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069952.t1 | XP_003598417.1 | 98.3 | 419 | 7 | 0 | 82 | 500 | 82 | 500 | 1.00E-222 | 782.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069952.t1 | Q8L518 | 68.5 | 340 | 107 | 0 | 115 | 454 | 7 | 346 | 7.0e-140 | 498.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069952.t1 | G7IVT5 | 98.3 | 419 | 7 | 0 | 82 | 500 | 82 | 500 | 7.2e-223 | 782.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene069952 | MS.gene27633 | PPI |
| MS.gene069952 | MS.gene52160 | PPI |
| MS.gene57514 | MS.gene069952 | PPI |
| MS.gene069952 | MS.gene58299 | PPI |
| MS.gene36871 | MS.gene069952 | PPI |
| MS.gene42220 | MS.gene069952 | PPI |
| MS.gene069952 | MS.gene019492 | PPI |
| MS.gene038844 | MS.gene069952 | PPI |
| MS.gene045848 | MS.gene069952 | PPI |
| MS.gene069952 | MS.gene067354 | PPI |
| MS.gene069952 | MS.gene50958 | PPI |
| MS.gene069952 | MS.gene83346 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069952.t1 | MTR_3g013430 | 97.800 | 500 | 11 | 0 | 1 | 500 | 1 | 500 | 0.0 | 1014 |
| MS.gene069952.t1 | MTR_8g041330 | 72.051 | 390 | 106 | 1 | 113 | 499 | 19 | 408 | 0.0 | 585 |
| MS.gene069952.t1 | MTR_6g039820 | 66.667 | 327 | 108 | 1 | 128 | 453 | 17 | 343 | 1.43e-168 | 479 |
| MS.gene069952.t1 | MTR_1g097850 | 62.259 | 363 | 121 | 3 | 113 | 473 | 2 | 350 | 1.54e-166 | 474 |
| MS.gene069952.t1 | MTR_1g097850 | 64.122 | 262 | 79 | 2 | 113 | 373 | 2 | 249 | 1.95e-119 | 351 |
| MS.gene069952.t1 | MTR_6g040230 | 66.239 | 234 | 77 | 1 | 220 | 453 | 265 | 496 | 2.49e-112 | 342 |
| MS.gene069952.t1 | MTR_2g054370 | 35.312 | 320 | 192 | 5 | 140 | 453 | 56 | 366 | 4.90e-55 | 189 |
| MS.gene069952.t1 | MTR_8g041220 | 74.118 | 85 | 22 | 0 | 356 | 440 | 47 | 131 | 2.69e-41 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069952.t1 | AT1G74320 | 68.529 | 340 | 107 | 0 | 115 | 454 | 7 | 346 | 3.12e-180 | 509 |
| MS.gene069952.t1 | AT4G09760 | 63.030 | 330 | 119 | 3 | 126 | 453 | 14 | 342 | 6.02e-158 | 452 |
| MS.gene069952.t1 | AT4G09760 | 63.030 | 330 | 119 | 3 | 126 | 453 | 14 | 342 | 6.02e-158 | 452 |
| MS.gene069952.t1 | AT1G71697 | 62.310 | 329 | 122 | 2 | 126 | 452 | 16 | 344 | 2.86e-156 | 448 |
| MS.gene069952.t1 | AT4G09760 | 58.294 | 211 | 85 | 3 | 126 | 334 | 14 | 223 | 5.08e-85 | 263 |
| MS.gene069952.t1 | AT4G09760 | 56.633 | 196 | 82 | 3 | 126 | 319 | 14 | 208 | 3.85e-75 | 236 |
| MS.gene069952.t1 | AT2G26830 | 36.254 | 331 | 192 | 6 | 131 | 453 | 45 | 364 | 1.02e-59 | 201 |
Find 110 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACAAGGAAATCTCTATTT+TGG | 0.136724 | 3.2:+6596733 | MS.gene069952:CDS |
| CCACCTGCTTGATTGCTTAT+AGG | 0.171347 | 3.2:-6595558 | None:intergenic |
| CGGTCAGCTTTGCTGCTTAC+AGG | 0.183900 | 3.2:-6595822 | None:intergenic |
| CAGGAAGATGAAGAGAGTTT+TGG | 0.228691 | 3.2:+6599730 | MS.gene069952:CDS |
| ATCATGGAACTCCTTCATTT+TGG | 0.238394 | 3.2:-6596476 | None:intergenic |
| TGATATCATTAGCAGGTAAA+TGG | 0.242873 | 3.2:+6595871 | MS.gene069952:CDS |
| TGCCACAATGATTTGCAATA+TGG | 0.280053 | 3.2:+6596794 | MS.gene069952:CDS |
| ACCAGAGTTCTTCGATCCTT+TGG | 0.330585 | 3.2:-6599702 | None:intergenic |
| GTACCCTCAGGGTTATTAAA+AGG | 0.333817 | 3.2:-6599537 | None:intergenic |
| ACTAGATGCAAATGCGTTAC+AGG | 0.349443 | 3.2:+6595902 | MS.gene069952:CDS |
| CAAAGAGAAACTCACTATTA+TGG | 0.357350 | 3.2:-6596852 | None:intergenic |
| AGAATCTCCTTTGCTTCTGC+TGG | 0.358458 | 3.2:-6595849 | None:intergenic |
| CACTATTATGGTCACAGAAT+TGG | 0.362127 | 3.2:-6596840 | None:intergenic |
| GTAGGAGTCGCCTGGTTTGC+AGG | 0.365174 | 3.2:-6595525 | None:intergenic |
| GGGCCTTTGGGGAATAATTT+CGG | 0.370418 | 3.2:+6598492 | MS.gene069952:CDS |
| AGGAGCGTGAAAGATTTGTT+AGG | 0.370918 | 3.2:+6598110 | MS.gene069952:CDS |
| CCACCTAAAGTGTCATTTAC+GGG | 0.371609 | 3.2:-6595633 | None:intergenic |
| ACAGAGGTTTCAAGAGTATT+GGG | 0.371611 | 3.2:+6599476 | MS.gene069952:CDS |
| GTGAAAAGAAAGCCAATCTT+TGG | 0.373883 | 3.2:+6596512 | MS.gene069952:CDS |
| CCTCACGAAAGGTTCTTGTT+AGG | 0.384064 | 3.2:+6595994 | MS.gene069952:CDS |
| CGAAGAACTCTGGTATCTTC+AGG | 0.394810 | 3.2:+6599711 | MS.gene069952:CDS |
| ACAGGGGTTTCAATGGCATC+TGG | 0.397243 | 3.2:-6595804 | None:intergenic |
| AACAGAGGTTTCAAGAGTAT+TGG | 0.403796 | 3.2:+6599475 | MS.gene069952:CDS |
| GGCCGCTATAAGAGCAGAAA+TGG | 0.419826 | 3.2:-6596455 | None:intergenic |
| AAGGTTCTTGTTAGGATCTA+CGG | 0.422916 | 3.2:+6596002 | MS.gene069952:CDS |
| ACCACCTAAAGTGTCATTTA+CGG | 0.432131 | 3.2:-6595634 | None:intergenic |
| CACCAGGCATATCTAGATCA+TGG | 0.437311 | 3.2:-6596492 | None:intergenic |
| ACTTCTCAACTTCTTGTAGT+AGG | 0.438883 | 3.2:-6598444 | None:intergenic |
| GCATCAGAGCTTAGAAGATA+AGG | 0.442159 | 3.2:-6599507 | None:intergenic |
| GCTGCTTACAGGGGTTTCAA+TGG | 0.448428 | 3.2:-6595811 | None:intergenic |
| GATATCATTAGCAGGTAAAT+GGG | 0.461907 | 3.2:+6595872 | MS.gene069952:CDS |
| GATTCTTCCGCAATGGGTGC+AGG | 0.463434 | 3.2:+6595462 | None:intergenic |
| GGTCAGCTTTGCTGCTTACA+GGG | 0.464141 | 3.2:-6595821 | None:intergenic |
| AGGTTCTTGTTAGGATCTAC+GGG | 0.464881 | 3.2:+6596003 | MS.gene069952:CDS |
| CCTCAATGTAGGCCAAAGAT+TGG | 0.466655 | 3.2:-6596524 | None:intergenic |
| TTTAATAACCCTGAGGGTAC+AGG | 0.469258 | 3.2:+6599540 | MS.gene069952:CDS |
| GGTCAGGGACCTCGTCTACT+AGG | 0.470717 | 3.2:+6596092 | MS.gene069952:CDS |
| CACAATTGAATTTGACTACA+AGG | 0.487535 | 3.2:+6599443 | MS.gene069952:CDS |
| TTGCTATAATCAAGAATATG+AGG | 0.491630 | 3.2:-6597988 | None:intergenic |
| GTACATGTCAAAGAATGGTC+AGG | 0.492273 | 3.2:+6596076 | MS.gene069952:CDS |
| GAATATGAGGCGTTTCTGTA+TGG | 0.492535 | 3.2:-6597975 | None:intergenic |
| GAGGTTTCCTCAGTTGTAGC+TGG | 0.492695 | 3.2:-6595975 | None:intergenic |
| TAGGATCTACGGGGAGGGTG+TGG | 0.493067 | 3.2:+6596013 | MS.gene069952:CDS |
| GCGTCTGCAGCGCATGCCAA+AGG | 0.493926 | 3.2:+6599686 | MS.gene069952:CDS |
| AATGATACAGCAGGTGATGA+TGG | 0.495476 | 3.2:+6595705 | MS.gene069952:CDS |
| TGCTGAGAATCCTGCAAACC+AGG | 0.496733 | 3.2:+6595515 | MS.gene069952:CDS |
| GGAGCGTGAAAGATTTGTTA+GGG | 0.498076 | 3.2:+6598111 | MS.gene069952:CDS |
| TGCTCCACTTCACTCTCACT+TGG | 0.498911 | 3.2:-6598421 | None:intergenic |
| TTGATAGGGATGATGAAATA+CGG | 0.500021 | 3.2:+6596045 | MS.gene069952:CDS |
| TTTGTCTTCTCCAAAAGAAG+TGG | 0.502871 | 3.2:+6596688 | MS.gene069952:CDS |
| TCAGGCTCGCATCAACGGAT+AGG | 0.503411 | 3.2:+6596767 | MS.gene069952:CDS |
| AGGGCATATTTGAAGACCTC+AGG | 0.504968 | 3.2:+6598130 | MS.gene069952:CDS |
| TTTGCTATATCATATGCTAC+AGG | 0.505115 | 3.2:-6597925 | None:intergenic |
| CTTGATTATAGCAAATATCC+TGG | 0.508261 | 3.2:+6597997 | MS.gene069952:CDS |
| ATGAGGTATTTGAAATAAAG+TGG | 0.508683 | 3.2:+6595952 | MS.gene069952:CDS |
| AATCAAATACCTGTACCCTC+AGG | 0.510529 | 3.2:-6599549 | None:intergenic |
| CCAATCTTTGGCCTACATTG+AGG | 0.512237 | 3.2:+6596524 | MS.gene069952:CDS |
| TCTTATAGCGGCCAAAATGA+AGG | 0.519658 | 3.2:+6596465 | MS.gene069952:CDS |
| CAGGCTCGCATCAACGGATA+GGG | 0.520005 | 3.2:+6596768 | MS.gene069952:CDS |
| TCGCAGCCATCTCACAAAAG+TGG | 0.525991 | 3.2:-6597948 | None:intergenic |
| AACCCCGTAAATGACACTTT+AGG | 0.528458 | 3.2:+6595630 | MS.gene069952:CDS |
| TTTGAGTACATGTCAAAGAA+TGG | 0.530571 | 3.2:+6596071 | MS.gene069952:CDS |
| AGCTGTCAGGCTCGCATCAA+CGG | 0.536968 | 3.2:+6596762 | MS.gene069952:CDS |
| TGAAGAGTTTATACATGCAC+GGG | 0.537689 | 3.2:+6596136 | MS.gene069952:CDS |
| TTATGTACATACCTCAATGT+AGG | 0.540731 | 3.2:-6596535 | None:intergenic |
| CTTGTTAGGATCTACGGGGA+GGG | 0.546574 | 3.2:+6596008 | MS.gene069952:CDS |
| TCTCCTTTGCTTCTGCTGGA+AGG | 0.547716 | 3.2:-6595845 | None:intergenic |
| GAGATTCTGATATCATTAGC+AGG | 0.548741 | 3.2:+6595864 | MS.gene069952:CDS |
| GCAGGTGATGATGGAAAAGA+AGG | 0.548923 | 3.2:+6595714 | MS.gene069952:CDS |
| TTACAGGTGATCCCTCTCAA+GGG | 0.554414 | 3.2:+6595918 | MS.gene069952:CDS |
| TTGAAGAGTTTATACATGCA+CGG | 0.561716 | 3.2:+6596135 | MS.gene069952:CDS |
| TTTCTGTAGTAGGAGTCGCC+TGG | 0.566230 | 3.2:-6595533 | None:intergenic |
| TTCCATGATCTAGATATGCC+TGG | 0.568317 | 3.2:+6596490 | MS.gene069952:CDS |
| GCCAAAGGATCGAAGAACTC+TGG | 0.572715 | 3.2:+6599701 | MS.gene069952:CDS |
| ATCCATTTCTGCTCTTATAG+CGG | 0.576198 | 3.2:+6596453 | MS.gene069952:CDS |
| ATCAAATACCTGTACCCTCA+GGG | 0.578244 | 3.2:-6599548 | None:intergenic |
| CCGCCTTCCAGCAGAAGCAA+AGG | 0.580944 | 3.2:+6595842 | MS.gene069952:CDS |
| AGAACCAAGTGAGAGTGAAG+TGG | 0.582495 | 3.2:+6598417 | MS.gene069952:CDS |
| CACCTAAAGTGTCATTTACG+GGG | 0.582742 | 3.2:-6595632 | None:intergenic |
| GGTTCTCTTGACAGACGTTG+AGG | 0.584712 | 3.2:+6598090 | MS.gene069952:intron |
| AATTCTACAAATGATACAGC+AGG | 0.584713 | 3.2:+6595696 | MS.gene069952:CDS |
| CCTATAAGCAATCAAGCAGG+TGG | 0.589660 | 3.2:+6595558 | MS.gene069952:CDS |
| AAAGTGGCCAGCTACAACTG+AGG | 0.589696 | 3.2:+6595968 | MS.gene069952:CDS |
| GTTACAGGTGATCCCTCTCA+AGG | 0.595301 | 3.2:+6595917 | MS.gene069952:CDS |
| GTCAGCTTTGCTGCTTACAG+GGG | 0.606553 | 3.2:-6595820 | None:intergenic |
| TCAGGGTTATTAAAAGGAGA+AGG | 0.608507 | 3.2:-6599531 | None:intergenic |
| TATAAGCAATCAAGCAGGTG+GGG | 0.609550 | 3.2:+6595560 | MS.gene069952:CDS |
| TACCATATTGCAAATCATTG+TGG | 0.610437 | 3.2:-6596796 | None:intergenic |
| CTTCAGAAATTGGCTTAGTG+AGG | 0.612289 | 3.2:+6596658 | MS.gene069952:intron |
| TACATGTCAAAGAATGGTCA+GGG | 0.612766 | 3.2:+6596077 | MS.gene069952:CDS |
| AACTGAGGAAACCTCACGAA+AGG | 0.614934 | 3.2:+6595983 | MS.gene069952:CDS |
| CCTTTGCTTCTGCTGGAAGG+CGG | 0.617396 | 3.2:-6595842 | None:intergenic |
| TTATTTGGACACGGTCGACA+AGG | 0.618896 | 3.2:+6596718 | MS.gene069952:CDS |
| GTTGCAAAAGACCAAGCAGT+TGG | 0.619982 | 3.2:+6595600 | MS.gene069952:CDS |
| AATCCTATAAGCAATCAAGC+AGG | 0.622217 | 3.2:+6595555 | MS.gene069952:CDS |
| GCTATAAGAGCAGAAATGGA+TGG | 0.622251 | 3.2:-6596451 | None:intergenic |
| TACAGGTGATCCCTCTCAAG+GGG | 0.630983 | 3.2:+6595919 | MS.gene069952:CDS |
| CTATAAGCAATCAAGCAGGT+GGG | 0.632457 | 3.2:+6595559 | MS.gene069952:CDS |
| GGTGCTATGAAAGACAAAGC+AGG | 0.639091 | 3.2:+6595735 | MS.gene069952:CDS |
| CCCGTAAATGACACTTTAGG+TGG | 0.644090 | 3.2:+6595633 | MS.gene069952:CDS |
| CCTAACAAGAACCTTTCGTG+AGG | 0.644921 | 3.2:-6595994 | None:intergenic |
| TCTTGTTAGGATCTACGGGG+AGG | 0.648442 | 3.2:+6596007 | MS.gene069952:CDS |
| GGTTTCAAGAGTATTGGGCA+AGG | 0.650192 | 3.2:+6599481 | MS.gene069952:CDS |
| ATCATTAGCAGGTAAATGGG+AGG | 0.658690 | 3.2:+6595875 | MS.gene069952:CDS |
| ATACCGAAATTATTCCCCAA+AGG | 0.681258 | 3.2:-6598495 | None:intergenic |
| GCAGGTGAAGATGACAAACA+AGG | 0.687986 | 3.2:+6595753 | MS.gene069952:CDS |
| ACAAGGAGTATGCGAAACAG+AGG | 0.696997 | 3.2:+6599460 | MS.gene069952:CDS |
| GTAAAACGTCCTAGTAGACG+AGG | 0.707228 | 3.2:-6596101 | None:intergenic |
| ACAGGTGATCCCTCTCAAGG+GGG | 0.737784 | 3.2:+6595920 | MS.gene069952:CDS |
| GGTTCTTGTTAGGATCTACG+GGG | 0.808372 | 3.2:+6596004 | MS.gene069952:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTT+GGG | + | chr3.2:6598191-6598210 | MS.gene069952:intron | 0.0% |
| !!! | TTTTTTTTTTTTTTTTTTTT+TGG | + | chr3.2:6598191-6598210 | MS.gene069952:intron | 0.0% |
| !! | TTGTAAAAAAAATGAAAAAA+GGG | + | chr3.2:6597276-6597295 | MS.gene069952:intron | 10.0% |
| !! | TTTGTAAAAAAAATGAAAAA+AGG | + | chr3.2:6597275-6597294 | MS.gene069952:intron | 10.0% |
| !!! | ATATATAAATTATTGTTTTC+AGG | + | chr3.2:6599656-6599675 | MS.gene069952:intron | 10.0% |
| !!! | ATATTTAATTTAATTTTCGT+TGG | + | chr3.2:6596932-6596951 | MS.gene069952:intron | 10.0% |
| !!! | TATTTTTTACTTTTAAAACA+GGG | - | chr3.2:6597381-6597400 | None:intergenic | 10.0% |
| !!! | TTATTTTTTACTTTTAAAAC+AGG | - | chr3.2:6597382-6597401 | None:intergenic | 10.0% |
| !! | GTTGCAAAAATAAAAATAAA+AGG | - | chr3.2:6598737-6598756 | None:intergenic | 15.0% |
| !!! | AAGTTTCTAGAAAATTATTT+TGG | + | chr3.2:6599101-6599120 | MS.gene069952:intron | 15.0% |
| !!! | AATTTTTTTGACAAAACAAA+AGG | - | chr3.2:6597124-6597143 | None:intergenic | 15.0% |
| !!! | AGTTTCTAGAAAATTATTTT+GGG | + | chr3.2:6599102-6599121 | MS.gene069952:intron | 15.0% |
| !!! | ATTTTTTTGACAAAACAAAA+GGG | - | chr3.2:6597123-6597142 | None:intergenic | 15.0% |
| !!! | CTTTTGTAATTTTAAATGTT+TGG | + | chr3.2:6599330-6599349 | MS.gene069952:intron | 15.0% |
| !!! | TTTAAAATTGTGTACATATT+GGG | + | chr3.2:6597669-6597688 | MS.gene069952:intron | 15.0% |
| !!! | TTTATAATGCATCAATTTTA+TGG | - | chr3.2:6596255-6596274 | None:intergenic | 15.0% |
| !!! | TTTTAAAATTGTGTACATAT+TGG | + | chr3.2:6597668-6597687 | MS.gene069952:intron | 15.0% |
| !! | AAAAAAATTGTCAACGAAAA+AGG | - | chr3.2:6597153-6597172 | None:intergenic | 20.0% |
| !! | AATAAACCTATCTGTATTTA+TGG | + | chr3.2:6597532-6597551 | MS.gene069952:intron | 20.0% |
| !! | AATATGAATTAACCATAAGT+GGG | + | chr3.2:6599267-6599286 | MS.gene069952:intron | 20.0% |
| !! | ACATTAAATCGTAAGATATT+TGG | - | chr3.2:6597867-6597886 | None:intergenic | 20.0% |
| !! | ATTCATGATTATATGAATGA+TGG | - | chr3.2:6598336-6598355 | None:intergenic | 20.0% |
| !! | CAAAAATAAAAATAAAAGGC+GGG | - | chr3.2:6598733-6598752 | None:intergenic | 20.0% |
| !! | GCAAAAATAAAAATAAAAGG+CGG | - | chr3.2:6598734-6598753 | None:intergenic | 20.0% |
| !! | TCAATGAACAAATAAAACAA+AGG | - | chr3.2:6597760-6597779 | None:intergenic | 20.0% |
| !!! | AACATTTTTGTCAGTAAAAA+GGG | - | chr3.2:6597097-6597116 | None:intergenic | 20.0% |
| !!! | AATTTTCTAGAAACTTAGAA+GGG | - | chr3.2:6599097-6599116 | None:intergenic | 20.0% |
| !!! | AGAAATGTATTTTATCTTGT+TGG | + | chr3.2:6598702-6598721 | MS.gene069952:intron | 20.0% |
| !!! | ATTATATAATTAGTCTGCAA+AGG | - | chr3.2:6596914-6596933 | None:intergenic | 20.0% |
| !!! | GAATGATGATTCTTTATTTT+TGG | - | chr3.2:6597509-6597528 | None:intergenic | 20.0% |
| !!! | TAACATTTTTGTCAGTAAAA+AGG | - | chr3.2:6597098-6597117 | None:intergenic | 20.0% |
| !!! | TAATTTTCTAGAAACTTAGA+AGG | - | chr3.2:6599098-6599117 | None:intergenic | 20.0% |
| !!! | TGTATCATTTGTAGAATTTT+CGG | - | chr3.2:6595694-6595713 | None:intergenic | 20.0% |
| !!! | TTGTAATTTTAAATGTTTGG+CGG | + | chr3.2:6599333-6599352 | MS.gene069952:intron | 20.0% |
| ! | ACTAGTATCACTTCAAATTT+AGG | + | chr3.2:6596275-6596294 | MS.gene069952:intron | 25.0% |
| ! | AGTTATTTAACAAACACACT+AGG | + | chr3.2:6598600-6598619 | MS.gene069952:intron | 25.0% |
| ! | ATGAAAAAGAGTCAAAAATC+AGG | - | chr3.2:6599037-6599056 | None:intergenic | 25.0% |
| ! | ATGAACAAATAAAACAAAGG+AGG | - | chr3.2:6597757-6597776 | None:intergenic | 25.0% |
| ! | ATGTGAAAATAATTAGTCAC+AGG | - | chr3.2:6598066-6598085 | None:intergenic | 25.0% |
| ! | ATTATTCTTCTTTGTACTCT+TGG | + | chr3.2:6598546-6598565 | MS.gene069952:intron | 25.0% |
| ! | CATTAAAATACAGAAAACCA+TGG | - | chr3.2:6598883-6598902 | None:intergenic | 25.0% |
| ! | GAATATGAATTAACCATAAG+TGG | + | chr3.2:6599266-6599285 | MS.gene069952:intron | 25.0% |
| ! | GGCAAAAAAAAAAATAACGA+AGG | - | chr3.2:6597846-6597865 | None:intergenic | 25.0% |
| ! | TACAAACAAAATTCTTCCAT+AGG | - | chr3.2:6597261-6597280 | None:intergenic | 25.0% |
| ! | TACCTATTATTTCATTTCCA+AGG | - | chr3.2:6599595-6599614 | None:intergenic | 25.0% |
| ! | TATTTCAATGCTTCAGAAAT+TGG | + | chr3.2:6596648-6596667 | MS.gene069952:intron | 25.0% |
| ! | TTGCTATAATCAAGAATATG+AGG | - | chr3.2:6597991-6598010 | None:intergenic | 25.0% |
| ! | TTTAATGTTATGTCTGTAAC+AGG | + | chr3.2:6597879-6597898 | MS.gene069952:intron | 25.0% |
| ! | TTTGAGAATTACAAAGGATT+GGG | + | chr3.2:6599128-6599147 | MS.gene069952:intron | 25.0% |
| ! | TTTGTTCCAAATCATGAAAT+AGG | - | chr3.2:6598256-6598275 | None:intergenic | 25.0% |
| !! | ATATGAATGATGGAATACAA+GGG | - | chr3.2:6598326-6598345 | None:intergenic | 25.0% |
| !! | ATGAGGTATTTGAAATAAAG+TGG | + | chr3.2:6595952-6595971 | MS.gene069952:CDS | 25.0% |
| !! | GATAATTATTTCTTCAGAAC+AGG | - | chr3.2:6596959-6596978 | None:intergenic | 25.0% |
| !! | TATATGAATGATGGAATACA+AGG | - | chr3.2:6598327-6598346 | None:intergenic | 25.0% |
| !! | TGTGACTAATTATTTTCACA+TGG | + | chr3.2:6598065-6598084 | MS.gene069952:intron | 25.0% |
| !! | TGTGGAAATTTTCTTTGATA+GGG | + | chr3.2:6596031-6596050 | MS.gene069952:CDS | 25.0% |
| !! | TTTGGAACAAAAAAGTTGTA+TGG | + | chr3.2:6598265-6598284 | MS.gene069952:intron | 25.0% |
| !!! | GATTCTTTATTTTTGGACAA+GGG | - | chr3.2:6597502-6597521 | None:intergenic | 25.0% |
| !!! | GTTTTATTTGTTCATTGACA+TGG | + | chr3.2:6597762-6597781 | MS.gene069952:intron | 25.0% |
| !!! | TGATTCTTTATTTTTGGACA+AGG | - | chr3.2:6597503-6597522 | None:intergenic | 25.0% |
| !!! | TTTACTTTTAAAACAGGGTA+AGG | - | chr3.2:6597376-6597395 | None:intergenic | 25.0% |
| !!! | TTTTGAGAATTACAAAGGAT+TGG | + | chr3.2:6599127-6599146 | MS.gene069952:intron | 25.0% |
| AATTCTACAAATGATACAGC+AGG | + | chr3.2:6595696-6595715 | MS.gene069952:CDS | 30.0% | |
| ACGATGAAAATAATTACCTG+AGG | - | chr3.2:6598149-6598168 | None:intergenic | 30.0% | |
| AGTTTCTGTTCCTGATATTA+TGG | + | chr3.2:6598377-6598396 | MS.gene069952:intron | 30.0% | |
| ATAAATTCAGAAGGGAAACA+TGG | - | chr3.2:6596401-6596420 | None:intergenic | 30.0% | |
| ATAGTAAATACCCTGATCAT+TGG | - | chr3.2:6598768-6598787 | None:intergenic | 30.0% | |
| ATATGTTTCCATAGTACTGT+TGG | - | chr3.2:6599062-6599081 | None:intergenic | 30.0% | |
| ATCAATGTTGTGTAACTCAA+AGG | - | chr3.2:6597474-6597493 | None:intergenic | 30.0% | |
| CAAAGAGAAACTCACTATTA+TGG | - | chr3.2:6596855-6596874 | None:intergenic | 30.0% | |
| CACAATTGAATTTGACTACA+AGG | + | chr3.2:6599443-6599462 | MS.gene069952:CDS | 30.0% | |
| CTTGATTATAGCAAATATCC+TGG | + | chr3.2:6597997-6598016 | MS.gene069952:CDS | 30.0% | |
| GATATCATTAGCAGGTAAAT+GGG | + | chr3.2:6595872-6595891 | MS.gene069952:CDS | 30.0% | |
| GATTATCCAAACAAATTGCT+TGG | + | chr3.2:6599197-6599216 | MS.gene069952:intron | 30.0% | |
| GTTTCTGTTCCTGATATTAT+GGG | + | chr3.2:6598378-6598397 | MS.gene069952:intron | 30.0% | |
| TACCATATTGCAAATCATTG+TGG | - | chr3.2:6596799-6596818 | None:intergenic | 30.0% | |
| TCAATGTTGTGTAACTCAAA+GGG | - | chr3.2:6597473-6597492 | None:intergenic | 30.0% | |
| TCAGCACTTATCTTTATGTT+GGG | + | chr3.2:6598981-6599000 | MS.gene069952:intron | 30.0% | |
| TGATATCATTAGCAGGTAAA+TGG | + | chr3.2:6595871-6595890 | MS.gene069952:CDS | 30.0% | |
| TGATGACCTATTTCATGATT+TGG | + | chr3.2:6598247-6598266 | MS.gene069952:intron | 30.0% | |
| TGCCTTGGAAATGAAATAAT+AGG | + | chr3.2:6599590-6599609 | MS.gene069952:intron | 30.0% | |
| TTACAAAAGAAATTGCATCG+TGG | - | chr3.2:6599319-6599338 | None:intergenic | 30.0% | |
| TTATGTACATACCTCAATGT+AGG | - | chr3.2:6596538-6596557 | None:intergenic | 30.0% | |
| TTCAGCACTTATCTTTATGT+TGG | + | chr3.2:6598980-6598999 | MS.gene069952:intron | 30.0% | |
| TTGAAGAGTTTATACATGCA+CGG | + | chr3.2:6596135-6596154 | MS.gene069952:CDS | 30.0% | |
| TTGAGAATTACAAAGGATTG+GGG | + | chr3.2:6599129-6599148 | MS.gene069952:intron | 30.0% | |
| TTGATAGGGATGATGAAATA+CGG | + | chr3.2:6596045-6596064 | MS.gene069952:CDS | 30.0% | |
| TTTGAGTACATGTCAAAGAA+TGG | + | chr3.2:6596071-6596090 | MS.gene069952:CDS | 30.0% | |
| ! | AAACTACAACCAAGTACTTT+TGG | + | chr3.2:6599356-6599375 | MS.gene069952:intron | 30.0% |
| ! | AACTGATTCACTCAATCATT+TGG | + | chr3.2:6597799-6597818 | MS.gene069952:intron | 30.0% |
| ! | AATAGTCCAAGCAATTTGTT+TGG | - | chr3.2:6599206-6599225 | None:intergenic | 30.0% |
| ! | ACTAATTATTTTCACATGGC+TGG | + | chr3.2:6598069-6598088 | MS.gene069952:intron | 30.0% |
| ! | AGAAGTGGAAGCTTTTTATT+TGG | + | chr3.2:6596703-6596722 | MS.gene069952:CDS | 30.0% |
| ! | CAAAATTCTTCCATAGGTTT+TGG | - | chr3.2:6597255-6597274 | None:intergenic | 30.0% |
| ! | CTTATAGGATTTTCTGTAGT+AGG | - | chr3.2:6595546-6595565 | None:intergenic | 30.0% |
| ! | GTGTGGAAATTTTCTTTGAT+AGG | + | chr3.2:6596030-6596049 | MS.gene069952:CDS | 30.0% |
| ! | TAAAAAGCTTCCACTTCTTT+TGG | - | chr3.2:6596701-6596720 | None:intergenic | 30.0% |
| ! | TTTGCTATATCATATGCTAC+AGG | - | chr3.2:6597928-6597947 | None:intergenic | 30.0% |
| ! | TTTTGGTAAAGTTCAGTTGA+AGG | - | chr3.2:6597238-6597257 | None:intergenic | 30.0% |
| !! | ATAAGTGCTGAAGATTCAAT+GGG | - | chr3.2:6598972-6598991 | None:intergenic | 30.0% |
| !! | GGAAATCTCTATTTTGGAAA+AGG | + | chr3.2:6596739-6596758 | MS.gene069952:CDS | 30.0% |
| AAAATGAAAAAAGGGCAACC+CGG | + | chr3.2:6597284-6597303 | MS.gene069952:intron | 35.0% | |
| AAATAACTTCTCCCTTTCCA+AGG | - | chr3.2:6598588-6598607 | None:intergenic | 35.0% | |
| AACCTATCTGTATTTATGGC+CGG | + | chr3.2:6597536-6597555 | MS.gene069952:intron | 35.0% | |
| AACTAACAGTCCAGTTCTTA+AGG | - | chr3.2:6598361-6598380 | None:intergenic | 35.0% | |
| AACTGTTCAAACCAATGATC+AGG | + | chr3.2:6598754-6598773 | MS.gene069952:intron | 35.0% | |
| AAGGTTCTTGTTAGGATCTA+CGG | + | chr3.2:6596002-6596021 | MS.gene069952:CDS | 35.0% | |
| AATCCTATAAGCAATCAAGC+AGG | + | chr3.2:6595555-6595574 | MS.gene069952:CDS | 35.0% | |
| AATGCTATGTTTCGACATCA+TGG | + | chr3.2:6597400-6597419 | MS.gene069952:intron | 35.0% | |
| ACTGTTCAAACCAATGATCA+GGG | + | chr3.2:6598755-6598774 | MS.gene069952:intron | 35.0% | |
| ACTTCTCAACTTCTTGTAGT+AGG | - | chr3.2:6598447-6598466 | None:intergenic | 35.0% | |
| AGAAACTTAGAAGGGTAGAA+GGG | - | chr3.2:6599089-6599108 | None:intergenic | 35.0% | |
| AGCGTCTGATAAATTCAGAA+GGG | - | chr3.2:6596409-6596428 | None:intergenic | 35.0% | |
| AGTCAAAAATCAGGTGAGAA+AGG | - | chr3.2:6599028-6599047 | None:intergenic | 35.0% | |
| ATACCGAAATTATTCCCCAA+AGG | - | chr3.2:6598498-6598517 | None:intergenic | 35.0% | |
| ATAGACTGACAAAAGAGAAG+TGG | + | chr3.2:6598645-6598664 | MS.gene069952:intron | 35.0% | |
| ATCCATTTCTGCTCTTATAG+CGG | + | chr3.2:6596453-6596472 | MS.gene069952:CDS | 35.0% | |
| ATCTTCTGATTATCTTGCTC+AGG | + | chr3.2:6599410-6599429 | MS.gene069952:intron | 35.0% | |
| CACTATTATGGTCACAGAAT+TGG | - | chr3.2:6596843-6596862 | None:intergenic | 35.0% | |
| CTGAACTTTACCAAAACCTA+TGG | + | chr3.2:6597242-6597261 | MS.gene069952:intron | 35.0% | |
| GAGATTCTGATATCATTAGC+AGG | + | chr3.2:6595864-6595883 | MS.gene069952:CDS | 35.0% | |
| GATTCACTCAATCATTTGGT+TGG | + | chr3.2:6597803-6597822 | MS.gene069952:intron | 35.0% | |
| GTAGTCACACACAAAAATGT+TGG | + | chr3.2:6599612-6599631 | MS.gene069952:intron | 35.0% | |
| GTGAAAAGAAAGCCAATCTT+TGG | + | chr3.2:6596512-6596531 | MS.gene069952:CDS | 35.0% | |
| TACATGTCAAAGAATGGTCA+GGG | + | chr3.2:6596077-6596096 | MS.gene069952:CDS | 35.0% | |
| TAGAAACTTAGAAGGGTAGA+AGG | - | chr3.2:6599090-6599109 | None:intergenic | 35.0% | |
| TAGTCTGAGAAATGATGTTG+AGG | - | chr3.2:6596625-6596644 | None:intergenic | 35.0% | |
| TCAGGGTTATTAAAAGGAGA+AGG | - | chr3.2:6599534-6599553 | None:intergenic | 35.0% | |
| TCATGAATGACCTTAAGAAC+TGG | + | chr3.2:6598348-6598367 | MS.gene069952:intron | 35.0% | |
| TCTTCTGATTATCTTGCTCA+GGG | + | chr3.2:6599411-6599430 | MS.gene069952:intron | 35.0% | |
| TCTTTATGTTGGGACATTAG+AGG | + | chr3.2:6598991-6599010 | MS.gene069952:intron | 35.0% | |
| TGAAGAGTTTATACATGCAC+GGG | + | chr3.2:6596136-6596155 | MS.gene069952:CDS | 35.0% | |
| TTATGAACCGTAACACTTCA+GGG | - | chr3.2:6596318-6596337 | None:intergenic | 35.0% | |
| TTCTTCTTTGTACTCTTGGA+TGG | + | chr3.2:6598550-6598569 | MS.gene069952:intron | 35.0% | |
| TTTATGAACCGTAACACTTC+AGG | - | chr3.2:6596319-6596338 | None:intergenic | 35.0% | |
| TTTCATGACCAACAGTACTA+TGG | + | chr3.2:6599051-6599070 | MS.gene069952:intron | 35.0% | |
| TTTGTCTTCTCCAAAAGAAG+TGG | + | chr3.2:6596688-6596707 | MS.gene069952:CDS | 35.0% | |
| ! | AACAGAGGTTTCAAGAGTAT+TGG | + | chr3.2:6599475-6599494 | MS.gene069952:CDS | 35.0% |
| ! | ACTCGCAAATCATCTTTTCT+GGG | + | chr3.2:6598471-6598490 | MS.gene069952:CDS | 35.0% |
| ! | AGGAAGATGAAGAGAGTTTT+GGG | + | chr3.2:6599731-6599750 | MS.gene069952:CDS | 35.0% |
| ! | ATCAGGGTATTTACTATTCG+TGG | + | chr3.2:6598771-6598790 | MS.gene069952:intron | 35.0% |
| ! | ATCATGGAACTCCTTCATTT+TGG | - | chr3.2:6596479-6596498 | None:intergenic | 35.0% |
| ! | CGACAAGGAAATCTCTATTT+TGG | + | chr3.2:6596733-6596752 | MS.gene069952:CDS | 35.0% |
| ! | CTACTAGGACGTTTTACAAA+TGG | + | chr3.2:6596107-6596126 | MS.gene069952:CDS | 35.0% |
| ! | TCTCCTTTTAATAACCCTGA+GGG | + | chr3.2:6599534-6599553 | MS.gene069952:CDS | 35.0% |
| ! | TGCCACAATGATTTGCAATA+TGG | + | chr3.2:6596794-6596813 | MS.gene069952:CDS | 35.0% |
| ! | TGGTCTTTTGCAACATTTAC+AGG | - | chr3.2:6595594-6595613 | None:intergenic | 35.0% |
| ! | TTCTCCTTTTAATAACCCTG+AGG | + | chr3.2:6599533-6599552 | MS.gene069952:CDS | 35.0% |
| !! | ACAGAGGTTTCAAGAGTATT+GGG | + | chr3.2:6599476-6599495 | MS.gene069952:CDS | 35.0% |
| !! | ACCACCTAAAGTGTCATTTA+CGG | - | chr3.2:6595637-6595656 | None:intergenic | 35.0% |
| !! | GATAAGTGCTGAAGATTCAA+TGG | - | chr3.2:6598973-6598992 | None:intergenic | 35.0% |
| !! | GGAAGCTTTTTATTTGGACA+CGG | + | chr3.2:6596709-6596728 | MS.gene069952:CDS | 35.0% |
| !! | GGGCATTTTGAGAATTACAA+AGG | + | chr3.2:6599122-6599141 | MS.gene069952:intron | 35.0% |
| !! | GTTGTTTTGTTATACTGCCT+TGG | + | chr3.2:6599575-6599594 | MS.gene069952:intron | 35.0% |
| !! | TCTTCGAAACCAAAAGTACT+TGG | - | chr3.2:6599368-6599387 | None:intergenic | 35.0% |
| !! | TTTTGGAGAAGACAAACGTT+TGG | - | chr3.2:6596684-6596703 | None:intergenic | 35.0% |
| !!! | TCTTTATTTTTGGACAAGGG+AGG | - | chr3.2:6597499-6597518 | None:intergenic | 35.0% |
| AACCCCGTAAATGACACTTT+AGG | + | chr3.2:6595630-6595649 | MS.gene069952:CDS | 40.0% | |
| AATATCCTGGTATGAACCTG+TGG | + | chr3.2:6598010-6598029 | MS.gene069952:intron | 40.0% | |
| AATCAAATACCTGTACCCTC+AGG | - | chr3.2:6599552-6599571 | None:intergenic | 40.0% | |
| AATGATACAGCAGGTGATGA+TGG | + | chr3.2:6595705-6595724 | MS.gene069952:CDS | 40.0% | |
| ACTAGATGCAAATGCGTTAC+AGG | + | chr3.2:6595902-6595921 | MS.gene069952:CDS | 40.0% | |
| AGCTAGCTATTCATCAACCA+TGG | + | chr3.2:6598863-6598882 | MS.gene069952:intron | 40.0% | |
| AGGTTCTTGTTAGGATCTAC+GGG | + | chr3.2:6596003-6596022 | MS.gene069952:CDS | 40.0% | |
| ATATTATGGGACTTGAACGC+AGG | + | chr3.2:6598391-6598410 | MS.gene069952:intron | 40.0% | |
| ATCAAATACCTGTACCCTCA+GGG | - | chr3.2:6599551-6599570 | None:intergenic | 40.0% | |
| ATCATTAGCAGGTAAATGGG+AGG | + | chr3.2:6595875-6595894 | MS.gene069952:CDS | 40.0% | |
| ATCCGGCCATAAATACAGAT+AGG | - | chr3.2:6597541-6597560 | None:intergenic | 40.0% | |
| ATTGATGAGAAGCCCACTTA+TGG | - | chr3.2:6599282-6599301 | None:intergenic | 40.0% | |
| CAGCGTCTGATAAATTCAGA+AGG | - | chr3.2:6596410-6596429 | None:intergenic | 40.0% | |
| CCCACATTCAAAATGCTATC+CGG | - | chr3.2:6597558-6597577 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr3.2:6597350-6597369 | None:intergenic | 40.0% | |
| CGTTCAAGTCCCATAATATC+AGG | - | chr3.2:6598390-6598409 | None:intergenic | 40.0% | |
| CTATAAGCAATCAAGCAGGT+GGG | + | chr3.2:6595559-6595578 | MS.gene069952:CDS | 40.0% | |
| CTTTGTACTCTTGGATGGTT+TGG | + | chr3.2:6598555-6598574 | MS.gene069952:intron | 40.0% | |
| GCACATCGAGTTCATAAGTT+TGG | - | chr3.2:6596369-6596388 | None:intergenic | 40.0% | |
| GCATCAGAGCTTAGAAGATA+AGG | - | chr3.2:6599510-6599529 | None:intergenic | 40.0% | |
| GCTATAAGAGCAGAAATGGA+TGG | - | chr3.2:6596454-6596473 | None:intergenic | 40.0% | |
| GTACATGTCAAAGAATGGTC+AGG | + | chr3.2:6596076-6596095 | MS.gene069952:CDS | 40.0% | |
| GTACCCTCAGGGTTATTAAA+AGG | - | chr3.2:6599540-6599559 | None:intergenic | 40.0% | |
| GTAGATGATTCTCAGCAAGA+AGG | - | chr3.2:6597632-6597651 | None:intergenic | 40.0% | |
| GTTGTGTAACTCAAAGGGAA+GGG | - | chr3.2:6597468-6597487 | None:intergenic | 40.0% | |
| TATAAGCAATCAAGCAGGTG+GGG | + | chr3.2:6595560-6595579 | MS.gene069952:CDS | 40.0% | |
| TCAAAGTCCAGTCTAACACT+TGG | - | chr3.2:6599179-6599198 | None:intergenic | 40.0% | |
| TCTTATAGCGGCCAAAATGA+AGG | + | chr3.2:6596465-6596484 | MS.gene069952:CDS | 40.0% | |
| TGGTAAAGTTCAGTTGAAGG+AGG | - | chr3.2:6597235-6597254 | None:intergenic | 40.0% | |
| TGTCAGTCTATCAAAACCCT+TGG | - | chr3.2:6598636-6598655 | None:intergenic | 40.0% | |
| TGTGTACATATTGGGAGTCA+AGG | + | chr3.2:6597677-6597696 | MS.gene069952:intron | 40.0% | |
| TGTTGTGTAACTCAAAGGGA+AGG | - | chr3.2:6597469-6597488 | None:intergenic | 40.0% | |
| TTATCGACCAAGTGTTAGAC+TGG | + | chr3.2:6599169-6599188 | MS.gene069952:intron | 40.0% | |
| TTCCATGATCTAGATATGCC+TGG | + | chr3.2:6596490-6596509 | MS.gene069952:CDS | 40.0% | |
| TTGTGTAACTCAAAGGGAAG+GGG | - | chr3.2:6597467-6597486 | None:intergenic | 40.0% | |
| ! | ACTAGGTTTTTGTGCACCAA+GGG | + | chr3.2:6598617-6598636 | MS.gene069952:intron | 40.0% |
| ! | AGGAGCGTGAAAGATTTGTT+AGG | + | chr3.2:6598110-6598129 | MS.gene069952:CDS | 40.0% |
| ! | CACTCGCAAATCATCTTTTC+TGG | + | chr3.2:6598470-6598489 | MS.gene069952:CDS | 40.0% |
| ! | CAGGAAGATGAAGAGAGTTT+TGG | + | chr3.2:6599730-6599749 | MS.gene069952:CDS | 40.0% |
| ! | CCGGATAGCATTTTGAATGT+GGG | + | chr3.2:6597555-6597574 | MS.gene069952:intron | 40.0% |
| ! | CGGATAGCATTTTGAATGTG+GGG | + | chr3.2:6597556-6597575 | MS.gene069952:intron | 40.0% |
| ! | CTCGCAAATCATCTTTTCTG+GGG | + | chr3.2:6598472-6598491 | MS.gene069952:CDS | 40.0% |
| ! | CTTCAGAAATTGGCTTAGTG+AGG | + | chr3.2:6596658-6596677 | MS.gene069952:intron | 40.0% |
| ! | GAATATGAGGCGTTTCTGTA+TGG | - | chr3.2:6597978-6597997 | None:intergenic | 40.0% |
| ! | TTGTTCACCCTGAAGTGTTA+CGG | + | chr3.2:6596308-6596327 | MS.gene069952:intron | 40.0% |
| ! | TTTAATAACCCTGAGGGTAC+AGG | + | chr3.2:6599540-6599559 | MS.gene069952:CDS | 40.0% |
| !! | AGCAAACCACTTTTGTGAGA+TGG | + | chr3.2:6597942-6597961 | MS.gene069952:CDS | 40.0% |
| !! | ATTTTGGAAAAGGAGCTGTC+AGG | + | chr3.2:6596749-6596768 | MS.gene069952:CDS | 40.0% |
| !! | CACCTAAAGTGTCATTTACG+GGG | - | chr3.2:6595635-6595654 | None:intergenic | 40.0% |
| !! | CCACCTAAAGTGTCATTTAC+GGG | - | chr3.2:6595636-6595655 | None:intergenic | 40.0% |
| !! | GATGAATAGCTAGCTCTGTA+TGG | - | chr3.2:6598858-6598877 | None:intergenic | 40.0% |
| !! | GGAGCGTGAAAGATTTGTTA+GGG | + | chr3.2:6598111-6598130 | MS.gene069952:CDS | 40.0% |
| !!! | AGATTGGCTTTCTTTTCACC+AGG | - | chr3.2:6596511-6596530 | None:intergenic | 40.0% |
| !!! | ATGAAGAGAGTTTTGGGTCT+TGG | + | chr3.2:6599737-6599756 | MS.gene069952:CDS | 40.0% |
| AACTGAGGAAACCTCACGAA+AGG | + | chr3.2:6595983-6596002 | MS.gene069952:CDS | 45.0% | |
| ACCAGAGTTCTTCGATCCTT+TGG | - | chr3.2:6599705-6599724 | None:intergenic | 45.0% | |
| ACTATTCGTGGCTCGTTTCA+TGG | + | chr3.2:6598783-6598802 | MS.gene069952:intron | 45.0% | |
| AGAACCAAGTGAGAGTGAAG+TGG | + | chr3.2:6598417-6598436 | MS.gene069952:CDS | 45.0% | |
| AGAATCTCCTTTGCTTCTGC+TGG | - | chr3.2:6595852-6595871 | None:intergenic | 45.0% | |
| AGGGCATATTTGAAGACCTC+AGG | + | chr3.2:6598130-6598149 | MS.gene069952:CDS | 45.0% | |
| CACCAGGCATATCTAGATCA+TGG | - | chr3.2:6596495-6596514 | None:intergenic | 45.0% | |
| CCAATCTTTGGCCTACATTG+AGG | + | chr3.2:6596524-6596543 | MS.gene069952:CDS | 45.0% | |
| CCACCTGCTTGATTGCTTAT+AGG | - | chr3.2:6595561-6595580 | None:intergenic | 45.0% | |
| CCCGTAAATGACACTTTAGG+TGG | + | chr3.2:6595633-6595652 | MS.gene069952:CDS | 45.0% | |
| CCTAACAAGAACCTTTCGTG+AGG | - | chr3.2:6595997-6596016 | None:intergenic | 45.0% | |
| CCTATAAGCAATCAAGCAGG+TGG | + | chr3.2:6595558-6595577 | MS.gene069952:CDS | 45.0% | |
| CCTCAATGTAGGCCAAAGAT+TGG | - | chr3.2:6596527-6596546 | None:intergenic | 45.0% | |
| CCTCACGAAAGGTTCTTGTT+AGG | + | chr3.2:6595994-6596013 | MS.gene069952:CDS | 45.0% | |
| CGAAGAACTCTGGTATCTTC+AGG | + | chr3.2:6599711-6599730 | MS.gene069952:CDS | 45.0% | |
| CTATTCGTGGCTCGTTTCAT+GGG | + | chr3.2:6598784-6598803 | MS.gene069952:intron | 45.0% | |
| GCAGGTGAAGATGACAAACA+AGG | + | chr3.2:6595753-6595772 | MS.gene069952:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr3.2:6597351-6597370 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr3.2:6597354-6597373 | None:intergenic | 45.0% | |
| GGAAACCAACAACACTCATC+AGG | - | chr3.2:6597611-6597630 | None:intergenic | 45.0% | |
| GGTTCTTGTTAGGATCTACG+GGG | + | chr3.2:6596004-6596023 | MS.gene069952:CDS | 45.0% | |
| GTAAAACGTCCTAGTAGACG+AGG | - | chr3.2:6596104-6596123 | None:intergenic | 45.0% | |
| GTTCAGTTGAAGGAGGAAAC+AGG | - | chr3.2:6597228-6597247 | None:intergenic | 45.0% | |
| GTTGCAAAAGACCAAGCAGT+TGG | + | chr3.2:6595600-6595619 | MS.gene069952:CDS | 45.0% | |
| TCAAAGGGAAGGGGATTTAC+AGG | - | chr3.2:6597458-6597477 | None:intergenic | 45.0% | |
| TGAATGCTTCAGAAAGCCAC+AGG | - | chr3.2:6598029-6598048 | None:intergenic | 45.0% | |
| TTACAGGTGATCCCTCTCAA+GGG | + | chr3.2:6595918-6595937 | MS.gene069952:CDS | 45.0% | |
| TTATTTGGACACGGTCGACA+AGG | + | chr3.2:6596718-6596737 | MS.gene069952:CDS | 45.0% | |
| ! | CACTAGGTTTTTGTGCACCA+AGG | + | chr3.2:6598616-6598635 | MS.gene069952:intron | 45.0% |
| ! | GCCGGATAGCATTTTGAATG+TGG | + | chr3.2:6597554-6597573 | MS.gene069952:intron | 45.0% |
| ! | GGGCCTTTGGGGAATAATTT+CGG | + | chr3.2:6598492-6598511 | MS.gene069952:CDS | 45.0% |
| ! | GGTGCTATGAAAGACAAAGC+AGG | + | chr3.2:6595735-6595754 | MS.gene069952:CDS | 45.0% |
| ! | TTGGCTTGAGACCTTGGAAA+GGG | + | chr3.2:6598574-6598593 | MS.gene069952:intron | 45.0% |
| !! | GCAGGTGATGATGGAAAAGA+AGG | + | chr3.2:6595714-6595733 | MS.gene069952:CDS | 45.0% |
| !! | GGTTTCAAGAGTATTGGGCA+AGG | + | chr3.2:6599481-6599500 | MS.gene069952:CDS | 45.0% |
| !! | TTTGGCTTGAGACCTTGGAA+AGG | + | chr3.2:6598573-6598592 | MS.gene069952:intron | 45.0% |
| !!! | ATCATCTTTTCTGGGGCCTT+TGG | + | chr3.2:6598479-6598498 | MS.gene069952:CDS | 45.0% |
| !!! | TCATCTTTTCTGGGGCCTTT+GGG | + | chr3.2:6598480-6598499 | MS.gene069952:CDS | 45.0% |
| !!! | TTTTGGGTCTTGGCTTGTTC+AGG | + | chr3.2:6599747-6599766 | MS.gene069952:CDS | 45.0% |
| AAAGTGGCCAGCTACAACTG+AGG | + | chr3.2:6595968-6595987 | MS.gene069952:CDS | 50.0% | |
| ACAGGGGTTTCAATGGCATC+TGG | - | chr3.2:6595807-6595826 | None:intergenic | 50.0% | |
| CAAGGGGGCAATGACAAATG+AGG | + | chr3.2:6595935-6595954 | MS.gene069952:CDS | 50.0% | |
| CTTGTTAGGATCTACGGGGA+GGG | + | chr3.2:6596008-6596027 | MS.gene069952:CDS | 50.0% | |
| GAAAGCCACAGGTTCATACC+AGG | - | chr3.2:6598018-6598037 | None:intergenic | 50.0% | |
| GAGGTTTCCTCAGTTGTAGC+TGG | - | chr3.2:6595978-6595997 | None:intergenic | 50.0% | |
| GCCAAAGGATCGAAGAACTC+TGG | + | chr3.2:6599701-6599720 | MS.gene069952:CDS | 50.0% | |
| GCTGCTTACAGGGGTTTCAA+TGG | - | chr3.2:6595814-6595833 | None:intergenic | 50.0% | |
| GGCCGCTATAAGAGCAGAAA+TGG | - | chr3.2:6596458-6596477 | None:intergenic | 50.0% | |
| GGTTCTCTTGACAGACGTTG+AGG | + | chr3.2:6598090-6598109 | MS.gene069952:intron | 50.0% | |
| GTTACAGGTGATCCCTCTCA+AGG | + | chr3.2:6595917-6595936 | MS.gene069952:CDS | 50.0% | |
| TACAGGTGATCCCTCTCAAG+GGG | + | chr3.2:6595919-6595938 | MS.gene069952:CDS | 50.0% | |
| TCGCAGCCATCTCACAAAAG+TGG | - | chr3.2:6597951-6597970 | None:intergenic | 50.0% | |
| TCTCCTTTGCTTCTGCTGGA+AGG | - | chr3.2:6595848-6595867 | None:intergenic | 50.0% | |
| TCTTGTTAGGATCTACGGGG+AGG | + | chr3.2:6596007-6596026 | MS.gene069952:CDS | 50.0% | |
| TGCTCCACTTCACTCTCACT+TGG | - | chr3.2:6598424-6598443 | None:intergenic | 50.0% | |
| TGCTGAGAATCCTGCAAACC+AGG | + | chr3.2:6595515-6595534 | MS.gene069952:CDS | 50.0% | |
| TTGTCATTGCCCCCTTGAGA+GGG | - | chr3.2:6595932-6595951 | None:intergenic | 50.0% | |
| TTTCTGTAGTAGGAGTCGCC+TGG | - | chr3.2:6595536-6595555 | None:intergenic | 50.0% | |
| TTTGTCATTGCCCCCTTGAG+AGG | - | chr3.2:6595933-6595952 | None:intergenic | 50.0% | |
| ! | GACAGCCTGATGAGTGTTGT+TGG | + | chr3.2:6597603-6597622 | MS.gene069952:intron | 50.0% |
| ! | GGTCAGCTTTGCTGCTTACA+GGG | - | chr3.2:6595824-6595843 | None:intergenic | 50.0% |
| ! | GGTTTTCTGCACCAACTGCT+TGG | - | chr3.2:6595614-6595633 | None:intergenic | 50.0% |
| ! | GTCAGCTTTGCTGCTTACAG+GGG | - | chr3.2:6595823-6595842 | None:intergenic | 50.0% |
| !! | GATGGTTTGGCTTGAGACCT+TGG | + | chr3.2:6598568-6598587 | MS.gene069952:intron | 50.0% |
| !!! | CATCTTTTCTGGGGCCTTTG+GGG | + | chr3.2:6598481-6598500 | MS.gene069952:CDS | 50.0% |
| ACAGGTGATCCCTCTCAAGG+GGG | + | chr3.2:6595920-6595939 | MS.gene069952:CDS | 55.0% | |
| AGCTGTCAGGCTCGCATCAA+CGG | + | chr3.2:6596762-6596781 | MS.gene069952:CDS | 55.0% | |
| CAGGCTCGCATCAACGGATA+GGG | + | chr3.2:6596768-6596787 | MS.gene069952:CDS | 55.0% | |
| CCTTTGCTTCTGCTGGAAGG+CGG | - | chr3.2:6595845-6595864 | None:intergenic | 55.0% | |
| TCAGGCTCGCATCAACGGAT+AGG | + | chr3.2:6596767-6596786 | MS.gene069952:CDS | 55.0% | |
| ! | CGGTCAGCTTTGCTGCTTAC+AGG | - | chr3.2:6595825-6595844 | None:intergenic | 55.0% |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr3.2:6597310-6597329 | MS.gene069952:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr3.2:6597306-6597325 | None:intergenic | 60.0% | |
| CATACGCAGGGTCTGGGAAG+GGG | + | chr3.2:6597323-6597342 | MS.gene069952:intron | 60.0% | |
| CCGCCTTCCAGCAGAAGCAA+AGG | + | chr3.2:6595842-6595861 | MS.gene069952:CDS | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr3.2:6597311-6597330 | MS.gene069952:intron | 60.0% | |
| CTTCCCAGACCCTGCGTATG+CGG | - | chr3.2:6597323-6597342 | None:intergenic | 60.0% | |
| GCATACGCAGGGTCTGGGAA+GGG | + | chr3.2:6597322-6597341 | MS.gene069952:intron | 60.0% | |
| GGTCAGGGACCTCGTCTACT+AGG | + | chr3.2:6596092-6596111 | MS.gene069952:CDS | 60.0% | |
| TAGGATCTACGGGGAGGGTG+TGG | + | chr3.2:6596013-6596032 | MS.gene069952:CDS | 60.0% | |
| TGGGAAGGGGTCCCACCATT+TGG | + | chr3.2:6597336-6597355 | MS.gene069952:intron | 60.0% | |
| TTCCCAGACCCTGCGTATGC+GGG | - | chr3.2:6597322-6597341 | None:intergenic | 60.0% | |
| ! | GTAGGAGTCGCCTGGTTTGC+AGG | - | chr3.2:6595528-6595547 | None:intergenic | 60.0% |
| CGCATACGCAGGGTCTGGGA+AGG | + | chr3.2:6597321-6597340 | MS.gene069952:intron | 65.0% | |
| CTCCCGCATACGCAGGGTCT+GGG | + | chr3.2:6597317-6597336 | MS.gene069952:intron | 65.0% | |
| GCGTCTGCAGCGCATGCCAA+AGG | + | chr3.2:6599686-6599705 | MS.gene069952:CDS | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr3.2:6597305-6597324 | None:intergenic | 65.0% | |
| GCTCCCGCATACGCAGGGTC+TGG | + | chr3.2:6597316-6597335 | MS.gene069952:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 6595474 | 6599781 | 6595474 | ID=MS.gene069952 |
| chr3.2 | mRNA | 6595474 | 6599781 | 6595474 | ID=MS.gene069952.t1;Parent=MS.gene069952 |
| chr3.2 | exon | 6595474 | 6596157 | 6595474 | ID=MS.gene069952.t1.exon1;Parent=MS.gene069952.t1 |
| chr3.2 | CDS | 6595474 | 6596157 | 6595474 | ID=cds.MS.gene069952.t1;Parent=MS.gene069952.t1 |
| chr3.2 | exon | 6596424 | 6596545 | 6596424 | ID=MS.gene069952.t1.exon2;Parent=MS.gene069952.t1 |
| chr3.2 | CDS | 6596424 | 6596545 | 6596424 | ID=cds.MS.gene069952.t1;Parent=MS.gene069952.t1 |
| chr3.2 | exon | 6596664 | 6596859 | 6596664 | ID=MS.gene069952.t1.exon3;Parent=MS.gene069952.t1 |
| chr3.2 | CDS | 6596664 | 6596859 | 6596664 | ID=cds.MS.gene069952.t1;Parent=MS.gene069952.t1 |
| chr3.2 | exon | 6597901 | 6598018 | 6597901 | ID=MS.gene069952.t1.exon4;Parent=MS.gene069952.t1 |
| chr3.2 | CDS | 6597901 | 6598018 | 6597901 | ID=cds.MS.gene069952.t1;Parent=MS.gene069952.t1 |
| chr3.2 | exon | 6598104 | 6598151 | 6598104 | ID=MS.gene069952.t1.exon5;Parent=MS.gene069952.t1 |
| chr3.2 | CDS | 6598104 | 6598151 | 6598104 | ID=cds.MS.gene069952.t1;Parent=MS.gene069952.t1 |
| chr3.2 | exon | 6598413 | 6598513 | 6598413 | ID=MS.gene069952.t1.exon6;Parent=MS.gene069952.t1 |
| chr3.2 | CDS | 6598413 | 6598513 | 6598413 | ID=cds.MS.gene069952.t1;Parent=MS.gene069952.t1 |
| chr3.2 | exon | 6599432 | 6599561 | 6599432 | ID=MS.gene069952.t1.exon7;Parent=MS.gene069952.t1 |
| chr3.2 | CDS | 6599432 | 6599561 | 6599432 | ID=cds.MS.gene069952.t1;Parent=MS.gene069952.t1 |
| chr3.2 | exon | 6599678 | 6599781 | 6599678 | ID=MS.gene069952.t1.exon8;Parent=MS.gene069952.t1 |
| chr3.2 | CDS | 6599678 | 6599781 | 6599678 | ID=cds.MS.gene069952.t1;Parent=MS.gene069952.t1 |
| Gene Sequence |
| Protein sequence |
