Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070177.t1 | XP_003599946.1 | 96.5 | 401 | 11 | 1 | 1 | 398 | 1 | 401 | 1.80E-214 | 755 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070177.t1 | Q9M5A9 | 72.9 | 409 | 77 | 4 | 1 | 397 | 1 | 387 | 9.1e-159 | 561.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070177.t1 | G7J1A0 | 96.5 | 401 | 11 | 1 | 1 | 398 | 1 | 401 | 1.3e-214 | 755.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049402 | MS.gene070177 | 0.817128 | 3.87E-52 | -1.69E-46 |
| MS.gene050338 | MS.gene070177 | 0.815344 | 9.70E-52 | -1.69E-46 |
| MS.gene051364 | MS.gene070177 | 0.803068 | 4.16E-49 | -1.69E-46 |
| MS.gene051422 | MS.gene070177 | 0.810653 | 1.04E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene070177 | -0.801894 | 7.26E-49 | -1.69E-46 |
| MS.gene055729 | MS.gene070177 | 0.820343 | 7.21E-53 | -1.69E-46 |
| MS.gene055730 | MS.gene070177 | 0.817816 | 2.71E-52 | -1.69E-46 |
| MS.gene055731 | MS.gene070177 | 0.810918 | 9.07E-51 | -1.69E-46 |
| MS.gene05590 | MS.gene070177 | 0.816825 | 4.53E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene070177 | 0.829682 | 4.49E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070177.t1 | MTR_3g049400 | 96.509 | 401 | 11 | 1 | 1 | 398 | 1 | 401 | 0.0 | 786 |
| MS.gene070177.t1 | MTR_2g022700 | 76.676 | 373 | 74 | 3 | 31 | 398 | 31 | 395 | 0.0 | 558 |
| MS.gene070177.t1 | MTR_4g131800 | 71.979 | 389 | 71 | 4 | 37 | 397 | 36 | 414 | 5.89e-170 | 502 |
| MS.gene070177.t1 | MTR_2g029180 | 52.885 | 312 | 141 | 5 | 87 | 395 | 84 | 392 | 5.53e-99 | 300 |
| MS.gene070177.t1 | MTR_4g088350 | 44.898 | 294 | 153 | 4 | 108 | 397 | 100 | 388 | 1.36e-80 | 253 |
| MS.gene070177.t1 | MTR_5g044220 | 39.820 | 334 | 185 | 5 | 75 | 397 | 65 | 393 | 1.24e-78 | 248 |
| MS.gene070177.t1 | MTR_4g105630 | 41.275 | 298 | 172 | 2 | 103 | 398 | 81 | 377 | 6.67e-71 | 228 |
| MS.gene070177.t1 | MTR_6g005480 | 43.871 | 310 | 169 | 4 | 93 | 398 | 100 | 408 | 1.49e-70 | 228 |
| MS.gene070177.t1 | MTR_3g077640 | 40.432 | 324 | 188 | 4 | 78 | 398 | 81 | 402 | 2.15e-66 | 217 |
| MS.gene070177.t1 | MTR_4g088350 | 43.284 | 268 | 143 | 4 | 134 | 397 | 15 | 277 | 3.91e-66 | 212 |
| MS.gene070177.t1 | MTR_4g105630 | 39.863 | 291 | 172 | 2 | 103 | 391 | 81 | 370 | 1.42e-65 | 213 |
| MS.gene070177.t1 | MTR_4g105630 | 37.154 | 253 | 155 | 3 | 103 | 352 | 81 | 332 | 1.24e-44 | 158 |
| MS.gene070177.t1 | MTR_4g105630 | 38.739 | 222 | 130 | 2 | 103 | 318 | 81 | 302 | 4.28e-43 | 153 |
| MS.gene070177.t1 | MTR_1g030320 | 25.902 | 305 | 187 | 7 | 114 | 398 | 21 | 306 | 1.49e-22 | 97.8 |
| MS.gene070177.t1 | MTR_3g072380 | 25.574 | 305 | 188 | 7 | 114 | 398 | 22 | 307 | 8.63e-22 | 95.9 |
| MS.gene070177.t1 | MTR_3g070000 | 23.100 | 329 | 234 | 10 | 78 | 398 | 2 | 319 | 2.31e-18 | 85.5 |
| MS.gene070177.t1 | MTR_3g462070 | 23.973 | 292 | 211 | 7 | 114 | 398 | 17 | 304 | 1.38e-16 | 80.1 |
| MS.gene070177.t1 | MTR_3g072380 | 29.167 | 168 | 109 | 3 | 114 | 274 | 22 | 186 | 2.70e-16 | 78.2 |
| MS.gene070177.t1 | MTR_5g081710 | 23.779 | 307 | 220 | 9 | 100 | 398 | 3 | 303 | 5.67e-16 | 78.6 |
| MS.gene070177.t1 | MTR_4g018760 | 21.284 | 296 | 216 | 6 | 113 | 398 | 19 | 307 | 7.66e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070177.t1 | AT5G54800 | 72.861 | 409 | 77 | 4 | 1 | 397 | 1 | 387 | 0.0 | 566 |
| MS.gene070177.t1 | AT1G61800 | 79.609 | 358 | 54 | 3 | 44 | 398 | 47 | 388 | 0.0 | 564 |
| MS.gene070177.t1 | AT1G61800 | 78.771 | 358 | 57 | 3 | 44 | 398 | 47 | 388 | 0.0 | 559 |
| MS.gene070177.t1 | AT5G17630 | 49.853 | 341 | 161 | 5 | 64 | 396 | 64 | 402 | 3.39e-111 | 332 |
| MS.gene070177.t1 | AT4G03950 | 56.040 | 298 | 68 | 7 | 105 | 398 | 16 | 254 | 5.84e-93 | 281 |
| MS.gene070177.t1 | AT5G46110 | 41.818 | 330 | 180 | 6 | 75 | 397 | 73 | 397 | 6.40e-80 | 252 |
| MS.gene070177.t1 | AT5G46110 | 41.818 | 330 | 180 | 6 | 75 | 397 | 73 | 397 | 9.25e-80 | 251 |
| MS.gene070177.t1 | AT5G46110 | 44.444 | 288 | 151 | 4 | 114 | 397 | 2 | 284 | 6.38e-79 | 245 |
| MS.gene070177.t1 | AT5G46110 | 40.606 | 330 | 173 | 7 | 75 | 397 | 73 | 386 | 4.79e-75 | 239 |
| MS.gene070177.t1 | AT3G01550 | 40.064 | 312 | 183 | 3 | 91 | 398 | 62 | 373 | 1.37e-67 | 219 |
| MS.gene070177.t1 | AT3G01550 | 39.103 | 312 | 181 | 4 | 91 | 398 | 62 | 368 | 2.11e-63 | 208 |
| MS.gene070177.t1 | AT5G33320 | 40.312 | 320 | 185 | 5 | 81 | 397 | 83 | 399 | 4.29e-63 | 208 |
| MS.gene070177.t1 | AT1G77610 | 26.490 | 302 | 189 | 6 | 114 | 398 | 16 | 301 | 1.07e-22 | 98.2 |
| MS.gene070177.t1 | AT1G21870 | 25.085 | 295 | 202 | 6 | 114 | 398 | 22 | 307 | 2.47e-22 | 97.4 |
| MS.gene070177.t1 | AT5G05820 | 25.000 | 300 | 211 | 10 | 107 | 398 | 12 | 305 | 3.17e-18 | 85.1 |
| MS.gene070177.t1 | AT3G11320 | 25.000 | 300 | 211 | 10 | 107 | 398 | 12 | 305 | 2.40e-17 | 82.4 |
| MS.gene070177.t1 | AT1G12500 | 25.503 | 298 | 203 | 10 | 112 | 398 | 64 | 353 | 2.22e-16 | 80.5 |
Find 80 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAGACTGATCTTGAATTT+TGG | 0.179678 | 3.2:+41909043 | MS.gene070177:CDS |
| CCGCAACATCTTCTCGAAAA+AGG | 0.198188 | 3.2:+41910402 | MS.gene070177:CDS |
| TGTGTTGGTGTTGGAAATTT+TGG | 0.226645 | 3.2:+41908724 | MS.gene070177:CDS |
| ACTGGTTCTGATGCTGGTTT+AGG | 0.229388 | 3.2:+41908595 | MS.gene070177:CDS |
| CTCTTATGATGTTGATCTCT+TGG | 0.233486 | 3.2:+41908998 | MS.gene070177:CDS |
| AAAACAGCTCTCGCTGAAAT+TGG | 0.253490 | 3.2:+41910547 | MS.gene070177:CDS |
| GCTGCAAAGAAAGTGAAAAT+TGG | 0.271783 | 3.2:+41908859 | MS.gene070177:CDS |
| TCTGGTTTCGAGATTTATCT+TGG | 0.313532 | 3.2:+41909930 | MS.gene070177:CDS |
| CAAAATTCAAGATCAGTCTT+AGG | 0.324094 | 3.2:-41909042 | None:intergenic |
| CTGTCTTTAGTTCCAATCAT+TGG | 0.330191 | 3.2:+41909979 | MS.gene070177:CDS |
| AAATTGGACCTCAATTCTTA+TGG | 0.330887 | 3.2:+41910563 | MS.gene070177:CDS |
| GGAGCCGCAATTGCTGTCTT+CGG | 0.341789 | 3.2:+41911516 | MS.gene070177:CDS |
| TATGACAGATATACGTTTCA+TGG | 0.344750 | 3.2:-41911442 | None:intergenic |
| GTTTCCAATGCTAAATGTTA+AGG | 0.346594 | 3.2:-41911418 | None:intergenic |
| GAGCCGCAATTGCTGTCTTC+GGG | 0.355259 | 3.2:+41911517 | MS.gene070177:CDS |
| CTGGTTCTGATGCTGGTTTA+GGG | 0.374659 | 3.2:+41908596 | MS.gene070177:CDS |
| AGAGCATTGACGGGCTGAAT+TGG | 0.376700 | 3.2:-41911492 | None:intergenic |
| GTGATCACTGGTTCTGATGC+TGG | 0.379531 | 3.2:+41908589 | MS.gene070177:CDS |
| GAGCTCAATTTCAATATGAT+TGG | 0.383141 | 3.2:+41910027 | MS.gene070177:CDS |
| TATCCAGCAGCCCACATTGC+TGG | 0.395472 | 3.2:-41910523 | None:intergenic |
| GTTGCTGTTGCACACACAAT+TGG | 0.398110 | 3.2:+41909823 | MS.gene070177:CDS |
| TCTTATGATGTTGATCTCTT+GGG | 0.408536 | 3.2:+41908999 | MS.gene070177:CDS |
| TTTAATTACCATAAGAATTG+AGG | 0.427313 | 3.2:-41910571 | None:intergenic |
| TTTCCAATGCTAAATGTTAA+GGG | 0.432602 | 3.2:-41911417 | None:intergenic |
| ACTTTCTTTGCAGCCTCTGA+AGG | 0.435598 | 3.2:-41908850 | None:intergenic |
| TGTAAATGATACAGCAACTT+TGG | 0.437217 | 3.2:-41909872 | None:intergenic |
| ATTCAGCCCGTCAATGCTCT+TGG | 0.442993 | 3.2:+41911495 | MS.gene070177:CDS |
| CTGCAAAGAAAGTGAAAATT+GGG | 0.443762 | 3.2:+41908860 | MS.gene070177:CDS |
| CATCTTGCATGTGTTGGTGT+TGG | 0.443957 | 3.2:+41908715 | MS.gene070177:CDS |
| GGACCAGCAATGTGGGCTGC+TGG | 0.446642 | 3.2:+41910520 | MS.gene070177:CDS |
| TGCGGCTCCAAGAGCATTGA+CGG | 0.448915 | 3.2:-41911502 | None:intergenic |
| TCTTTAGTTCCAATCATTGG+TGG | 0.450678 | 3.2:+41909982 | MS.gene070177:CDS |
| TTGTCTCAATGATGAAATCA+TGG | 0.456738 | 3.2:-41908557 | None:intergenic |
| ATTCTATCATCTATACAATC+AGG | 0.464239 | 3.2:+41911365 | MS.gene070177:CDS |
| AGTGCACATCCACCAATGAT+TGG | 0.466284 | 3.2:-41909991 | None:intergenic |
| CTGGTTTCGAGATTTATCTT+GGG | 0.470237 | 3.2:+41909931 | MS.gene070177:CDS |
| AATTGGACATGTTGCGGCTA+CGG | 0.470782 | 3.2:+41909840 | MS.gene070177:CDS |
| GTTGATGTAAGCCAAGGGTA+AGG | 0.477983 | 3.2:-41908955 | None:intergenic |
| TGAATGCTTACCCTTACCCT+TGG | 0.485194 | 3.2:+41908944 | MS.gene070177:CDS |
| CCTTTGCATCTTGCATGTGT+TGG | 0.488370 | 3.2:+41908709 | MS.gene070177:CDS |
| ATGAAGGGAAAGTCTGTTAG+TGG | 0.498113 | 3.2:+41910427 | MS.gene070177:CDS |
| CACGCCCTTTGCAATTGCTG+TGG | 0.500018 | 3.2:+41910495 | MS.gene070177:CDS |
| GTTTAATATTTATAACAAGA+AGG | 0.502820 | 3.2:+41908918 | MS.gene070177:CDS |
| CGGGACCTTCTTATACTCTC+AGG | 0.506019 | 3.2:+41911536 | MS.gene070177:CDS |
| AAAAGATTGTGGTTGAACTA+GGG | 0.507003 | 3.2:-41908632 | None:intergenic |
| TCTCCCTTAACATTTAGCAT+TGG | 0.512173 | 3.2:+41911414 | MS.gene070177:CDS |
| AAAGACAGATAGACTGGCAC+AGG | 0.513511 | 3.2:-41909964 | None:intergenic |
| TGTTGATCTCTTGGGCCACT+AGG | 0.518207 | 3.2:+41909007 | MS.gene070177:CDS |
| CCCTTTGCAATTGCTGTGGA+AGG | 0.524196 | 3.2:+41910499 | MS.gene070177:CDS |
| TGACGGGCTGAATTGGTGTA+TGG | 0.536988 | 3.2:-41911485 | None:intergenic |
| AGATCAGAGATTGAAGGTGC+AGG | 0.549014 | 3.2:+41908823 | MS.gene070177:CDS |
| CCTTCCACAGCAATTGCAAA+GGG | 0.555264 | 3.2:-41910499 | None:intergenic |
| GCTGATAGATCAGAGATTGA+AGG | 0.555536 | 3.2:+41908817 | MS.gene070177:CDS |
| CAACCTGGTATTGTGATCAC+TGG | 0.556416 | 3.2:+41908577 | MS.gene070177:CDS |
| TCAGGTGTCTTACATGTCGT+TGG | 0.558309 | 3.2:+41911383 | MS.gene070177:CDS |
| GGAACTAAAGACAGATAGAC+TGG | 0.559770 | 3.2:-41909970 | None:intergenic |
| GAGAGAGTTGATGTAAGCCA+AGG | 0.562039 | 3.2:-41908961 | None:intergenic |
| TCAACTCTCTCACTTGCTTG+TGG | 0.577730 | 3.2:+41908973 | MS.gene070177:CDS |
| CAGATAGACTGGCACAGGGA+AGG | 0.585869 | 3.2:-41909959 | None:intergenic |
| ACACACAATTGGACATGTTG+CGG | 0.587557 | 3.2:+41909834 | MS.gene070177:CDS |
| TTTACACATATCATCAAGAG+TGG | 0.588123 | 3.2:+41909889 | MS.gene070177:CDS |
| GGTCCCGAAGACAGCAATTG+CGG | 0.591919 | 3.2:-41911520 | None:intergenic |
| TCCTTCCACAGCAATTGCAA+AGG | 0.593008 | 3.2:-41910500 | None:intergenic |
| ATTTCATCATTGAGACAACC+TGG | 0.594337 | 3.2:+41908562 | MS.gene070177:CDS |
| CCAACACATGCAAGATGCAA+AGG | 0.594837 | 3.2:-41908709 | None:intergenic |
| AGGTGCAGGAACACCTTCAG+AGG | 0.600972 | 3.2:+41908837 | MS.gene070177:CDS |
| CAAAGGGCGTGAGAATTGCA+AGG | 0.602323 | 3.2:-41910483 | None:intergenic |
| GCGGCTCCAAGAGCATTGAC+GGG | 0.602591 | 3.2:-41911501 | None:intergenic |
| GAAACCAGAACACTAAAAGC+AGG | 0.604333 | 3.2:-41909916 | None:intergenic |
| TTGATGTAAGCCAAGGGTAA+GGG | 0.604430 | 3.2:-41908954 | None:intergenic |
| AGAGAGTTGATGTAAGCCAA+GGG | 0.622530 | 3.2:-41908960 | None:intergenic |
| TTACACATATCATCAAGAGT+GGG | 0.637054 | 3.2:+41909890 | MS.gene070177:CDS |
| TGTGGAAGGACCAGCAATGT+GGG | 0.639694 | 3.2:+41910513 | MS.gene070177:CDS |
| AAGTACCTGAGAGTATAAGA+AGG | 0.644691 | 3.2:-41911541 | None:intergenic |
| GAACCAGTGATCACAATACC+AGG | 0.646544 | 3.2:-41908580 | None:intergenic |
| TACACATATCATCAAGAGTG+GGG | 0.668891 | 3.2:+41909891 | MS.gene070177:CDS |
| AAAGGGCGTGAGAATTGCAA+GGG | 0.680969 | 3.2:-41910482 | None:intergenic |
| AGGAGCTTCAGCAATCCTAG+TGG | 0.698645 | 3.2:-41909022 | None:intergenic |
| CTGTGGAAGGACCAGCAATG+TGG | 0.703927 | 3.2:+41910512 | MS.gene070177:CDS |
| AAGACAGATAGACTGGCACA+GGG | 0.744929 | 3.2:-41909963 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAACATATTGAAATATTT+CGG | - | chr3.2:41909324-41909343 | None:intergenic | 15.0% |
| !! | GTTTAATATTTATAACAAGA+AGG | + | chr3.2:41908918-41908937 | MS.gene070177:CDS | 15.0% |
| !!! | TTTTTTTCTTTAGAGAAAAA+GGG | + | chr3.2:41909102-41909121 | MS.gene070177:intron | 15.0% |
| !! | AAAAACAAATTCAAACTTAC+AGG | - | chr3.2:41909081-41909100 | None:intergenic | 20.0% |
| !! | AAAACAAATTCAAACTTACA+GGG | - | chr3.2:41909080-41909099 | None:intergenic | 20.0% |
| !! | AAAGTCAATGTAATCAAATT+TGG | - | chr3.2:41910326-41910345 | None:intergenic | 20.0% |
| !! | AAGTCAATGTAATCAAATTT+GGG | - | chr3.2:41910325-41910344 | None:intergenic | 20.0% |
| !! | AATAATATGAAGCACAATTA+AGG | - | chr3.2:41911833-41911852 | None:intergenic | 20.0% |
| !! | ATAATCTGTGTTTGATTAAT+TGG | + | chr3.2:41910165-41910184 | MS.gene070177:intron | 20.0% |
| !! | ATTCATTGTCTTTATGAAAA+GGG | + | chr3.2:41912039-41912058 | MS.gene070177:intron | 20.0% |
| !! | GAAATATTTCAATATGTTTG+TGG | + | chr3.2:41909323-41909342 | MS.gene070177:intron | 20.0% |
| !! | TAATCTGTGTTTGATTAATT+GGG | + | chr3.2:41910166-41910185 | MS.gene070177:intron | 20.0% |
| !! | TGCAAAATATAGAAAAAGAA+GGG | + | chr3.2:41912369-41912388 | MS.gene070177:intron | 20.0% |
| !! | TTAATTGTGCTTCATATTAT+TGG | + | chr3.2:41911832-41911851 | MS.gene070177:intron | 20.0% |
| !! | TTGCAAAATATAGAAAAAGA+AGG | + | chr3.2:41912368-41912387 | MS.gene070177:intron | 20.0% |
| !! | TTTAATTACCATAAGAATTG+AGG | - | chr3.2:41910574-41910593 | None:intergenic | 20.0% |
| !!! | AAAATTCACGATCTTTTATT+AGG | + | chr3.2:41910691-41910710 | MS.gene070177:intron | 20.0% |
| !!! | AGTTAATGTTGTTTAAATGA+TGG | + | chr3.2:41911151-41911170 | MS.gene070177:intron | 20.0% |
| !!! | ATTTTAAATTCTTTAGTTGC+AGG | + | chr3.2:41911010-41911029 | MS.gene070177:intron | 20.0% |
| !!! | CAAAAAATAGCAATTTGTTA+TGG | - | chr3.2:41909655-41909674 | None:intergenic | 20.0% |
| !!! | GACTTTTTTTTTTCTTTTTC+AGG | + | chr3.2:41910340-41910359 | MS.gene070177:intron | 20.0% |
| !!! | GCAACTAAAGAATTTAAAAT+TGG | - | chr3.2:41911010-41911029 | None:intergenic | 20.0% |
| !!! | GCATTTTTTTTTTTTTTCTC+TGG | + | chr3.2:41911987-41912006 | MS.gene070177:intron | 20.0% |
| !!! | GTTTTTTTCTTTAGAGAAAA+AGG | + | chr3.2:41909101-41909120 | MS.gene070177:intron | 20.0% |
| !!! | TATTTTGTTTTTACGTTGTT+TGG | + | chr3.2:41910073-41910092 | MS.gene070177:intron | 20.0% |
| !!! | TTCTTTTTCTATATTTTGCA+AGG | - | chr3.2:41912369-41912388 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTCAGGTTTTAT+GGG | + | chr3.2:41910349-41910368 | MS.gene070177:intron | 20.0% |
| !!! | TTTTTCTTTTTCAGGTTTTA+TGG | + | chr3.2:41910348-41910367 | MS.gene070177:intron | 20.0% |
| !!! | TTTTTTTTCTTGTTCTGATT+GGG | + | chr3.2:41911229-41911248 | MS.gene070177:intron | 20.0% |
| !!! | TTTTTTTTTCTTGTTCTGAT+TGG | + | chr3.2:41911228-41911247 | MS.gene070177:intron | 20.0% |
| ! | AAAAATATTATTCATGCACG+AGG | - | chr3.2:41911188-41911207 | None:intergenic | 25.0% |
| ! | AAAGATGGTAAAAAAGATTG+TGG | - | chr3.2:41908646-41908665 | None:intergenic | 25.0% |
| ! | AAGTCAACAAGAGTTTATTA+TGG | + | chr3.2:41912080-41912099 | MS.gene070177:intron | 25.0% |
| ! | AGAGTTTATTATGGAAAAGA+TGG | + | chr3.2:41912089-41912108 | MS.gene070177:intron | 25.0% |
| ! | AGCTATGCATAATATCAATA+TGG | + | chr3.2:41910810-41910829 | MS.gene070177:intron | 25.0% |
| ! | AGTCAATGTAATCAAATTTG+GGG | - | chr3.2:41910324-41910343 | None:intergenic | 25.0% |
| ! | ATATTTCAATATGTTTGTGG+AGG | + | chr3.2:41909326-41909345 | MS.gene070177:intron | 25.0% |
| ! | ATGATGAATAATATGAGTAG+AGG | - | chr3.2:41911774-41911793 | None:intergenic | 25.0% |
| ! | ATTCTATCATCTATACAATC+AGG | + | chr3.2:41911365-41911384 | MS.gene070177:CDS | 25.0% |
| ! | ATTGATATTATGCATAGCTT+TGG | - | chr3.2:41910809-41910828 | None:intergenic | 25.0% |
| ! | CATAATATCAATATGGTGAA+AGG | + | chr3.2:41910817-41910836 | MS.gene070177:intron | 25.0% |
| ! | CATTCATTGTCTTTATGAAA+AGG | + | chr3.2:41912038-41912057 | MS.gene070177:intron | 25.0% |
| ! | CTACTCATATTATTCATCAT+CGG | + | chr3.2:41911774-41911793 | MS.gene070177:intron | 25.0% |
| ! | CTGGAAGGAAAAAAAAAAAT+AGG | + | chr3.2:41911911-41911930 | MS.gene070177:intron | 25.0% |
| ! | GGATCAATATTGTCAAATAA+CGG | + | chr3.2:41909513-41909532 | MS.gene070177:intron | 25.0% |
| ! | TAGATAATAAAGTGCACTAA+AGG | - | chr3.2:41910230-41910249 | None:intergenic | 25.0% |
| ! | TCAATGTGATAAATGAATGA+AGG | - | chr3.2:41909765-41909784 | None:intergenic | 25.0% |
| ! | TCCATATTATGACTAAAGTA+TGG | + | chr3.2:41911301-41911320 | MS.gene070177:intron | 25.0% |
| ! | TCTTACAACCAAACAATAAA+CGG | - | chr3.2:41911271-41911290 | None:intergenic | 25.0% |
| ! | TGATGAATAATATGAGTAGA+GGG | - | chr3.2:41911773-41911792 | None:intergenic | 25.0% |
| ! | TTGAGTTCAGAAAAAAACAA+AGG | + | chr3.2:41909246-41909265 | MS.gene070177:intron | 25.0% |
| ! | TTTCCAATGCTAAATGTTAA+GGG | - | chr3.2:41911420-41911439 | None:intergenic | 25.0% |
| !! | TGCAATTTTGAACTCATATA+TGG | + | chr3.2:41909205-41909224 | MS.gene070177:intron | 25.0% |
| !! | TTTTCCTTCATTCATTTATC+TGG | + | chr3.2:41909732-41909751 | MS.gene070177:intron | 25.0% |
| !!! | ACAATCTTTTTTACCATCTT+TGG | + | chr3.2:41908645-41908664 | MS.gene070177:CDS | 25.0% |
| !!! | AGATCGTGAATTTTTTTTAG+AGG | - | chr3.2:41910685-41910704 | None:intergenic | 25.0% |
| !!! | GCTTATATGTTTTTTTGTTC+TGG | + | chr3.2:41909161-41909180 | MS.gene070177:intron | 25.0% |
| !!! | TTTCTTTTTCAGGTTTTATG+GGG | + | chr3.2:41910350-41910369 | MS.gene070177:intron | 25.0% |
| AAAAAGATTGTGGTTGAACT+AGG | - | chr3.2:41908636-41908655 | None:intergenic | 30.0% | |
| AAAAGATTGTGGTTGAACTA+GGG | - | chr3.2:41908635-41908654 | None:intergenic | 30.0% | |
| AAATTGGACCTCAATTCTTA+TGG | + | chr3.2:41910563-41910582 | MS.gene070177:CDS | 30.0% | |
| AAGAAGGGTTAGAAACAATT+TGG | + | chr3.2:41912384-41912403 | MS.gene070177:intron | 30.0% | |
| AAGTTCAAACCAATAGAGTT+AGG | - | chr3.2:41912167-41912186 | None:intergenic | 30.0% | |
| AATTGATTGGTGGAATTGAT+AGG | + | chr3.2:41909126-41909145 | MS.gene070177:intron | 30.0% | |
| ACATTAACTCATAAAAACCC+AGG | - | chr3.2:41911140-41911159 | None:intergenic | 30.0% | |
| ACGATGACAACAAACATAAT+AGG | - | chr3.2:41910623-41910642 | None:intergenic | 30.0% | |
| ACTTTAGTCATAATATGGAG+AGG | - | chr3.2:41911300-41911319 | None:intergenic | 30.0% | |
| AGAGAAAAAGGGAAATTGAT+TGG | + | chr3.2:41909113-41909132 | MS.gene070177:intron | 30.0% | |
| ATAGAGTACAAAGGATTGAA+TGG | - | chr3.2:41909484-41909503 | None:intergenic | 30.0% | |
| ATGACCAGATAAATGAATGA+AGG | - | chr3.2:41909739-41909758 | None:intergenic | 30.0% | |
| ATTACTGTTACTACATGTCA+GGG | + | chr3.2:41911702-41911721 | MS.gene070177:intron | 30.0% | |
| ATTATGCACATAGAGTACAA+AGG | - | chr3.2:41909493-41909512 | None:intergenic | 30.0% | |
| ATTTCAAGAAACATGTTCCT+TGG | - | chr3.2:41910273-41910292 | None:intergenic | 30.0% | |
| CAAAATTCAAGATCAGTCTT+AGG | - | chr3.2:41909045-41909064 | None:intergenic | 30.0% | |
| CGAACAATTGTGAAATGATA+TGG | + | chr3.2:41909706-41909725 | MS.gene070177:intron | 30.0% | |
| CGATGACAACAAACATAATA+GGG | - | chr3.2:41910622-41910641 | None:intergenic | 30.0% | |
| CTGCAAAAATCAGTAAAACA+AGG | - | chr3.2:41912582-41912601 | None:intergenic | 30.0% | |
| CTGCAAAGAAAGTGAAAATT+GGG | + | chr3.2:41908860-41908879 | MS.gene070177:CDS | 30.0% | |
| GAGCTCAATTTCAATATGAT+TGG | + | chr3.2:41910027-41910046 | MS.gene070177:CDS | 30.0% | |
| GCCATACTTTAGTCATAATA+TGG | - | chr3.2:41911305-41911324 | None:intergenic | 30.0% | |
| GTCAATGTAATCAAATTTGG+GGG | - | chr3.2:41910323-41910342 | None:intergenic | 30.0% | |
| GTCGAATGAATCAATGATTT+AGG | - | chr3.2:41910784-41910803 | None:intergenic | 30.0% | |
| GTTTATTATGGAAAAGATGG+AGG | + | chr3.2:41912092-41912111 | MS.gene070177:intron | 30.0% | |
| GTTTCCAATGCTAAATGTTA+AGG | - | chr3.2:41911421-41911440 | None:intergenic | 30.0% | |
| TAACTATGATATCAGTCTTC+TGG | + | chr3.2:41910720-41910739 | MS.gene070177:intron | 30.0% | |
| TATAGCTGCCAATAAAACAT+TGG | - | chr3.2:41912131-41912150 | None:intergenic | 30.0% | |
| TATGACAGATATACGTTTCA+TGG | - | chr3.2:41911445-41911464 | None:intergenic | 30.0% | |
| TATTACTGTTACTACATGTC+AGG | + | chr3.2:41911701-41911720 | MS.gene070177:intron | 30.0% | |
| TATTATGACTAAAGTATGGC+TGG | + | chr3.2:41911305-41911324 | MS.gene070177:intron | 30.0% | |
| TCAAGTCCCAAATCAAAATA+AGG | - | chr3.2:41911071-41911090 | None:intergenic | 30.0% | |
| TCTTATGATGTTGATCTCTT+GGG | + | chr3.2:41908999-41909018 | MS.gene070177:CDS | 30.0% | |
| TGTAAATGATACAGCAACTT+TGG | - | chr3.2:41909875-41909894 | None:intergenic | 30.0% | |
| TTACACATATCATCAAGAGT+GGG | + | chr3.2:41909890-41909909 | MS.gene070177:CDS | 30.0% | |
| TTCTTTGATGTTTCAACTTC+AGG | + | chr3.2:41909801-41909820 | MS.gene070177:intron | 30.0% | |
| TTGTCTTTATGAAAAGGGTT+TGG | + | chr3.2:41912044-41912063 | MS.gene070177:intron | 30.0% | |
| TTTACACATATCATCAAGAG+TGG | + | chr3.2:41909889-41909908 | MS.gene070177:CDS | 30.0% | |
| TTTGTACTCTATGTGCATAA+TGG | + | chr3.2:41909492-41909511 | MS.gene070177:intron | 30.0% | |
| ! | AGCTAAGTGTTGTCAAATAA+CGG | + | chr3.2:41909588-41909607 | MS.gene070177:intron | 30.0% |
| ! | CTAAGACTGATCTTGAATTT+TGG | + | chr3.2:41909043-41909062 | MS.gene070177:CDS | 30.0% |
| ! | GTTATATTTTGCAACTTGGT+GGG | + | chr3.2:41908882-41908901 | MS.gene070177:CDS | 30.0% |
| ! | TAGGTGATCCAATGTTTTAT+TGG | + | chr3.2:41912120-41912139 | MS.gene070177:intron | 30.0% |
| ! | TGAATGAGTTTGAAATCCTA+TGG | - | chr3.2:41912024-41912043 | None:intergenic | 30.0% |
| ! | TTGGGTTATATTTTGCAACT+TGG | + | chr3.2:41908878-41908897 | MS.gene070177:CDS | 30.0% |
| ! | TTTTATTGGCAGCTATACTT+GGG | + | chr3.2:41912134-41912153 | MS.gene070177:intron | 30.0% |
| !!! | ATCAGAGAAGAGTTTTGAAA+AGG | + | chr3.2:41908765-41908784 | MS.gene070177:CDS | 30.0% |
| !!! | CTTGTTTTACTGATTTTTGC+AGG | + | chr3.2:41912580-41912599 | MS.gene070177:intron | 30.0% |
| !!! | GTCCATCCTTATTTTGATTT+GGG | + | chr3.2:41911062-41911081 | MS.gene070177:intron | 30.0% |
| !!! | TCAGAGAAGAGTTTTGAAAA+GGG | + | chr3.2:41908766-41908785 | MS.gene070177:CDS | 30.0% |
| !!! | TCTTTTTTACCATCTTTGGT+TGG | + | chr3.2:41908649-41908668 | MS.gene070177:CDS | 30.0% |
| !!! | TGTCCATCCTTATTTTGATT+TGG | + | chr3.2:41911061-41911080 | MS.gene070177:intron | 30.0% |
| !!! | TTCTTTTTCAGGTTTTATGG+GGG | + | chr3.2:41910351-41910370 | MS.gene070177:intron | 30.0% |
| AACCAAACAATAAACGGAAG+TGG | - | chr3.2:41911265-41911284 | None:intergenic | 35.0% | |
| AAGTCAATGTCAACATGAGT+TGG | + | chr3.2:41912216-41912235 | MS.gene070177:intron | 35.0% | |
| AGTAAAAGCAGTTTCCATGT+AGG | + | chr3.2:41912342-41912361 | MS.gene070177:intron | 35.0% | |
| ATTTCATCATTGAGACAACC+TGG | + | chr3.2:41908562-41908581 | MS.gene070177:CDS | 35.0% | |
| CAATATGGTGAAAGGTCAAA+TGG | + | chr3.2:41910825-41910844 | MS.gene070177:intron | 35.0% | |
| CTCTTATGATGTTGATCTCT+TGG | + | chr3.2:41908998-41909017 | MS.gene070177:CDS | 35.0% | |
| CTGGTTTCGAGATTTATCTT+GGG | + | chr3.2:41909931-41909950 | MS.gene070177:CDS | 35.0% | |
| CTTGGAAAAGGAATATGTGA+TGG | - | chr3.2:41912199-41912218 | None:intergenic | 35.0% | |
| GAAAAAGGGAAATTGATTGG+TGG | + | chr3.2:41909116-41909135 | MS.gene070177:intron | 35.0% | |
| GAAAAGGAATATGTGATGGT+AGG | - | chr3.2:41912195-41912214 | None:intergenic | 35.0% | |
| GCTGCAAAGAAAGTGAAAAT+TGG | + | chr3.2:41908859-41908878 | MS.gene070177:CDS | 35.0% | |
| GCTTCTAATAGGAGATTCAA+TGG | + | chr3.2:41912314-41912333 | MS.gene070177:intron | 35.0% | |
| GTCCCAAATCAAAATAAGGA+TGG | - | chr3.2:41911067-41911086 | None:intergenic | 35.0% | |
| TACACATATCATCAAGAGTG+GGG | + | chr3.2:41909891-41909910 | MS.gene070177:CDS | 35.0% | |
| TATTAGAAGCCTCAATGTGA+AGG | - | chr3.2:41912304-41912323 | None:intergenic | 35.0% | |
| TCAAACCAATAGAGTTAGGT+AGG | - | chr3.2:41912163-41912182 | None:intergenic | 35.0% | |
| TCTCCCTTAACATTTAGCAT+TGG | + | chr3.2:41911414-41911433 | MS.gene070177:CDS | 35.0% | |
| TCTTTATGAAAAGGGTTTGG+TGG | + | chr3.2:41912047-41912066 | MS.gene070177:intron | 35.0% | |
| TGAAAGATCCATTACGAAGA+GGG | + | chr3.2:41911856-41911875 | MS.gene070177:intron | 35.0% | |
| TGTGATTGACAGCAATGTAA+CGG | + | chr3.2:41909680-41909699 | MS.gene070177:intron | 35.0% | |
| TTCACATTGAGGCTTCTAAT+AGG | + | chr3.2:41912303-41912322 | MS.gene070177:intron | 35.0% | |
| TTCCACTTCCGTTTATTGTT+TGG | + | chr3.2:41911260-41911279 | MS.gene070177:intron | 35.0% | |
| TTTAGATTCCGAACTGCATA+GGG | + | chr3.2:41909377-41909396 | MS.gene070177:intron | 35.0% | |
| ! | AACTCATGTTGACATTGACT+TGG | - | chr3.2:41912217-41912236 | None:intergenic | 35.0% |
| ! | AAGTACCTGAGAGTATAAGA+AGG | - | chr3.2:41911544-41911563 | None:intergenic | 35.0% |
| ! | ATATGTTTGTGGAGGTTTTG+TGG | + | chr3.2:41909334-41909353 | MS.gene070177:intron | 35.0% |
| ! | ATATTTTGCAAGGTCCTACA+TGG | - | chr3.2:41912359-41912378 | None:intergenic | 35.0% |
| ! | CTGTCTTTAGTTCCAATCAT+TGG | + | chr3.2:41909979-41909998 | MS.gene070177:CDS | 35.0% |
| ! | GGTTATATTTTGCAACTTGG+TGG | + | chr3.2:41908881-41908900 | MS.gene070177:CDS | 35.0% |
| ! | TCTGGTTTCGAGATTTATCT+TGG | + | chr3.2:41909930-41909949 | MS.gene070177:CDS | 35.0% |
| ! | TCTTTAGTTCCAATCATTGG+TGG | + | chr3.2:41909982-41910001 | MS.gene070177:CDS | 35.0% |
| ! | TTTTAGATTCCGAACTGCAT+AGG | + | chr3.2:41909376-41909395 | MS.gene070177:intron | 35.0% |
| ! | TTTTTACCATCTTTGGTTGG+TGG | + | chr3.2:41908652-41908671 | MS.gene070177:CDS | 35.0% |
| !! | CGAGTAGTTTTGCATTGTTT+TGG | + | chr3.2:41910191-41910210 | MS.gene070177:intron | 35.0% |
| !! | GTTTTATTGGCAGCTATACT+TGG | + | chr3.2:41912133-41912152 | MS.gene070177:intron | 35.0% |
| !! | TACATGGAAACTGCTTTTAC+TGG | - | chr3.2:41912343-41912362 | None:intergenic | 35.0% |
| !! | TATGTTTGTGGAGGTTTTGT+GGG | + | chr3.2:41909335-41909354 | MS.gene070177:intron | 35.0% |
| !! | TGTTGACATTGACTTGGAAA+AGG | - | chr3.2:41912211-41912230 | None:intergenic | 35.0% |
| !!! | CATTGTTTTGGCTAGTAATC+TGG | + | chr3.2:41910203-41910222 | MS.gene070177:intron | 35.0% |
| !!! | GAGTTTTGAAAAGGGTGATT+TGG | + | chr3.2:41908774-41908793 | MS.gene070177:CDS | 35.0% |
| !!! | GTGTTGGTGTTGGAAATTTT+GGG | + | chr3.2:41908725-41908744 | MS.gene070177:CDS | 35.0% |
| !!! | TGTGTTGGTGTTGGAAATTT+TGG | + | chr3.2:41908724-41908743 | MS.gene070177:CDS | 35.0% |
| AAAACAGCTCTCGCTGAAAT+TGG | + | chr3.2:41910547-41910566 | MS.gene070177:CDS | 40.0% | |
| AACACATTCCCTCTTCGTAA+TGG | - | chr3.2:41911867-41911886 | None:intergenic | 40.0% | |
| AAGGAATATGTGATGGTAGG+TGG | - | chr3.2:41912192-41912211 | None:intergenic | 40.0% | |
| ACACACAATTGGACATGTTG+CGG | + | chr3.2:41909834-41909853 | MS.gene070177:CDS | 40.0% | |
| ACCAATGTGCTTTGCTAGAA+GGG | - | chr3.2:41911959-41911978 | None:intergenic | 40.0% | |
| ACCTACCAACTGTAGAAATC+TGG | + | chr3.2:41912441-41912460 | MS.gene070177:intron | 40.0% | |
| ACTTGAACCTAAGTCACAAC+GGG | + | chr3.2:41912464-41912483 | MS.gene070177:intron | 40.0% | |
| ATAGATTGAGTAGTCTCGAC+AGG | - | chr3.2:41910878-41910897 | None:intergenic | 40.0% | |
| ATAGGACTAGAACCTCAAAG+TGG | + | chr3.2:41911929-41911948 | MS.gene070177:intron | 40.0% | |
| ATATGTAGCTCCAACAAGTC+AGG | + | chr3.2:41911579-41911598 | MS.gene070177:intron | 40.0% | |
| ATGAAGGGAAAGTCTGTTAG+TGG | + | chr3.2:41910427-41910446 | MS.gene070177:CDS | 40.0% | |
| ATTACGAAGAGGGAATGTGT+TGG | + | chr3.2:41911866-41911885 | MS.gene070177:intron | 40.0% | |
| CAAGTCCAGATTTCTACAGT+TGG | - | chr3.2:41912449-41912468 | None:intergenic | 40.0% | |
| CGCAACATCTTCTCGAAAAA+GGG | + | chr3.2:41910403-41910422 | MS.gene070177:CDS | 40.0% | |
| CTGAAAGATCCATTACGAAG+AGG | + | chr3.2:41911855-41911874 | MS.gene070177:intron | 40.0% | |
| GAAACCAGAACACTAAAAGC+AGG | - | chr3.2:41909919-41909938 | None:intergenic | 40.0% | |
| GACTTGAACCTAAGTCACAA+CGG | + | chr3.2:41912463-41912482 | MS.gene070177:intron | 40.0% | |
| GCAACATCTTCTCGAAAAAG+GGG | + | chr3.2:41910404-41910423 | MS.gene070177:CDS | 40.0% | |
| GCTGATAGATCAGAGATTGA+AGG | + | chr3.2:41908817-41908836 | MS.gene070177:CDS | 40.0% | |
| GGAACTAAAGACAGATAGAC+TGG | - | chr3.2:41909973-41909992 | None:intergenic | 40.0% | |
| GGATTCCTACCTAACTCTAT+TGG | + | chr3.2:41912155-41912174 | MS.gene070177:intron | 40.0% | |
| GGGGGCTATGATATCAAATT+TGG | + | chr3.2:41910369-41910388 | MS.gene070177:CDS | 40.0% | |
| GTACAAAGGATTGAATGGAC+TGG | - | chr3.2:41909479-41909498 | None:intergenic | 40.0% | |
| TCAAGAAACATGTTCCTTGG+TGG | - | chr3.2:41910270-41910289 | None:intergenic | 40.0% | |
| TCCAGATTTCTACAGTTGGT+AGG | - | chr3.2:41912445-41912464 | None:intergenic | 40.0% | |
| TTACGAAGAGGGAATGTGTT+GGG | + | chr3.2:41911867-41911886 | MS.gene070177:intron | 40.0% | |
| TTCTCGAAAAAGGGGATGAA+GGG | + | chr3.2:41910412-41910431 | MS.gene070177:CDS | 40.0% | |
| TTGATGTAAGCCAAGGGTAA+GGG | - | chr3.2:41908957-41908976 | None:intergenic | 40.0% | |
| TTTGGCGCAATATAAGTTCG+AGG | + | chr3.2:41910091-41910110 | MS.gene070177:intron | 40.0% | |
| ! | ACACCATTAACCTGACTTGT+TGG | - | chr3.2:41911592-41911611 | None:intergenic | 40.0% |
| ! | AGAGGGCACAGTAAAAAATG+AGG | - | chr3.2:41911756-41911775 | None:intergenic | 40.0% |
| ! | GAGGGCACAGTAAAAAATGA+GGG | - | chr3.2:41911755-41911774 | None:intergenic | 40.0% |
| ! | GATTTTCCACCAACCAAAGA+TGG | - | chr3.2:41908661-41908680 | None:intergenic | 40.0% |
| ! | TCTGGAGTAAAAACTGCCAT+AGG | + | chr3.2:41912005-41912024 | MS.gene070177:intron | 40.0% |
| !! | AGAGAGTTGATGTAAGCCAA+GGG | - | chr3.2:41908963-41908982 | None:intergenic | 40.0% |
| !! | ATGTTTGTGGAGGTTTTGTG+GGG | + | chr3.2:41909336-41909355 | MS.gene070177:intron | 40.0% |
| !! | GGTTTTGTGGGGTTTTTATG+CGG | + | chr3.2:41909347-41909366 | MS.gene070177:intron | 40.0% |
| !! | GTTTGTGGTTTGCTCATTAC+TGG | + | chr3.2:41911892-41911911 | MS.gene070177:intron | 40.0% |
| !!! | CCTTTTTCGAGAAGATGTTG+CGG | - | chr3.2:41910405-41910424 | None:intergenic | 40.0% |
| !!! | CGGATTTTAGAATCCGAGAA+AGG | - | chr3.2:41909304-41909323 | None:intergenic | 40.0% |
| AAAGACAGATAGACTGGCAC+AGG | - | chr3.2:41909967-41909986 | None:intergenic | 45.0% | |
| AAATCATGTGCTCAGGTGTC+TGG | - | chr3.2:41912273-41912292 | None:intergenic | 45.0% | |
| AAGACAGATAGACTGGCACA+GGG | - | chr3.2:41909966-41909985 | None:intergenic | 45.0% | |
| AATTGGACATGTTGCGGCTA+CGG | + | chr3.2:41909840-41909859 | MS.gene070177:CDS | 45.0% | |
| ACCCTTCTAGCAAAGCACAT+TGG | + | chr3.2:41911955-41911974 | MS.gene070177:intron | 45.0% | |
| ACTTTCTTTGCAGCCTCTGA+AGG | - | chr3.2:41908853-41908872 | None:intergenic | 45.0% | |
| AGACACCTGAGCACATGATT+TGG | + | chr3.2:41912272-41912291 | MS.gene070177:intron | 45.0% | |
| AGTGCACATCCACCAATGAT+TGG | - | chr3.2:41909994-41910013 | None:intergenic | 45.0% | |
| CAACCTGGTATTGTGATCAC+TGG | + | chr3.2:41908577-41908596 | MS.gene070177:CDS | 45.0% | |
| CACCAATGTGCTTTGCTAGA+AGG | - | chr3.2:41911960-41911979 | None:intergenic | 45.0% | |
| CCAACACATGCAAGATGCAA+AGG | - | chr3.2:41908712-41908731 | None:intergenic | 45.0% | |
| CCAACTCCAGTTGACACAAA+TGG | - | chr3.2:41912506-41912525 | None:intergenic | 45.0% | |
| CCATTTGTGTCAACTGGAGT+TGG | + | chr3.2:41912503-41912522 | MS.gene070177:intron | 45.0% | |
| CCGCAACATCTTCTCGAAAA+AGG | + | chr3.2:41910402-41910421 | MS.gene070177:CDS | 45.0% | |
| CCTTCCACAGCAATTGCAAA+GGG | - | chr3.2:41910502-41910521 | None:intergenic | 45.0% | |
| CCTTTGCATCTTGCATGTGT+TGG | + | chr3.2:41908709-41908728 | MS.gene070177:CDS | 45.0% | |
| CTCCAGTTGACACAAATGGT+TGG | - | chr3.2:41912502-41912521 | None:intergenic | 45.0% | |
| CTCTCGCGTATTCTCTACAT+AGG | - | chr3.2:41910964-41910983 | None:intergenic | 45.0% | |
| CTTCTAGCAAAGCACATTGG+TGG | + | chr3.2:41911958-41911977 | MS.gene070177:intron | 45.0% | |
| CTTCTCGAAAAAGGGGATGA+AGG | + | chr3.2:41910411-41910430 | MS.gene070177:CDS | 45.0% | |
| GAACCAGTGATCACAATACC+AGG | - | chr3.2:41908583-41908602 | None:intergenic | 45.0% | |
| GAAGCCTCAATGTGAAGGTT+TGG | - | chr3.2:41912299-41912318 | None:intergenic | 45.0% | |
| GACAGGACAGGAGTTTAACT+TGG | - | chr3.2:41910861-41910880 | None:intergenic | 45.0% | |
| GCGCAATATAAGTTCGAGGT+AGG | + | chr3.2:41910095-41910114 | MS.gene070177:intron | 45.0% | |
| GCTCCAACAAGTCAGGTTAA+TGG | + | chr3.2:41911586-41911605 | MS.gene070177:intron | 45.0% | |
| GGAAAAGATGGAGGCTCTTT+AGG | + | chr3.2:41912101-41912120 | MS.gene070177:intron | 45.0% | |
| GTCCAACCATTTGTGTCAAC+TGG | + | chr3.2:41912497-41912516 | MS.gene070177:intron | 45.0% | |
| GTCGACAAGGAAACTCAGAA+AGG | - | chr3.2:41912246-41912265 | None:intergenic | 45.0% | |
| GTCTTGTGTACGACACTTGT+TGG | + | chr3.2:41911612-41911631 | MS.gene070177:intron | 45.0% | |
| GTTATGACACTGTAGCGTAG+CGG | + | chr3.2:41909621-41909640 | MS.gene070177:intron | 45.0% | |
| GTTGATGTAAGCCAAGGGTA+AGG | - | chr3.2:41908958-41908977 | None:intergenic | 45.0% | |
| TACGAAGAGGGAATGTGTTG+GGG | + | chr3.2:41911868-41911887 | MS.gene070177:intron | 45.0% | |
| TAGAAGGGTTCACCACTTTG+AGG | - | chr3.2:41911944-41911963 | None:intergenic | 45.0% | |
| TCAACTCTCTCACTTGCTTG+TGG | + | chr3.2:41908973-41908992 | MS.gene070177:CDS | 45.0% | |
| TCAGGTGTCTTACATGTCGT+TGG | + | chr3.2:41911383-41911402 | MS.gene070177:CDS | 45.0% | |
| TCCTTCCACAGCAATTGCAA+AGG | - | chr3.2:41910503-41910522 | None:intergenic | 45.0% | |
| TGAATGCTTACCCTTACCCT+TGG | + | chr3.2:41908944-41908963 | MS.gene070177:CDS | 45.0% | |
| TGGTCCAAACCTTCACATTG+AGG | + | chr3.2:41912292-41912311 | MS.gene070177:intron | 45.0% | |
| TTGCTCGATTCTATCCACCA+AGG | + | chr3.2:41910253-41910272 | MS.gene070177:intron | 45.0% | |
| TTGGACCAAATCATGTGCTC+AGG | - | chr3.2:41912280-41912299 | None:intergenic | 45.0% | |
| ! | AAAGGCGCGAAAAACTCACA+GGG | - | chr3.2:41909286-41909305 | None:intergenic | 45.0% |
| ! | AAAGGGCGTGAGAATTGCAA+GGG | - | chr3.2:41910485-41910504 | None:intergenic | 45.0% |
| ! | AGATCAGAGATTGAAGGTGC+AGG | + | chr3.2:41908823-41908842 | MS.gene070177:CDS | 45.0% |
| ! | CATCTTGCATGTGTTGGTGT+TGG | + | chr3.2:41908715-41908734 | MS.gene070177:CDS | 45.0% |
| ! | GTTGCTGTTGCACACACAAT+TGG | + | chr3.2:41909823-41909842 | MS.gene070177:CDS | 45.0% |
| ! | TGAGTTTTTCGCGCCTTTCT+CGG | + | chr3.2:41909288-41909307 | MS.gene070177:intron | 45.0% |
| ! | TGTGGGGTTTTTATGCGGTT+CGG | + | chr3.2:41909352-41909371 | MS.gene070177:intron | 45.0% |
| !! | ACTGGTTCTGATGCTGGTTT+AGG | + | chr3.2:41908595-41908614 | MS.gene070177:CDS | 45.0% |
| !! | CTGGTTCTGATGCTGGTTTA+GGG | + | chr3.2:41908596-41908615 | MS.gene070177:CDS | 45.0% |
| !! | GAGAGAGTTGATGTAAGCCA+AGG | - | chr3.2:41908964-41908983 | None:intergenic | 45.0% |
| !! | GTGGTTTGCTCATTACTGGA+AGG | + | chr3.2:41911896-41911915 | MS.gene070177:intron | 45.0% |
| AGATTATCCATGACGCGCGA+TGG | + | chr3.2:41911099-41911118 | MS.gene070177:intron | 50.0% | |
| AGGAGCTTCAGCAATCCTAG+TGG | - | chr3.2:41909025-41909044 | None:intergenic | 50.0% | |
| ATTCAGCCCGTCAATGCTCT+TGG | + | chr3.2:41911495-41911514 | MS.gene070177:CDS | 50.0% | |
| CAAAGCACATTGGTGGAGGA+AGG | + | chr3.2:41911965-41911984 | MS.gene070177:intron | 50.0% | |
| CCCTTTGCAATTGCTGTGGA+AGG | + | chr3.2:41910499-41910518 | MS.gene070177:CDS | 50.0% | |
| CGGGACCTTCTTATACTCTC+AGG | + | chr3.2:41911536-41911555 | MS.gene070177:CDS | 50.0% | |
| CTAGCAAAGCACATTGGTGG+AGG | + | chr3.2:41911961-41911980 | MS.gene070177:intron | 50.0% | |
| GCGCGTCATGGATAATCTCT+TGG | - | chr3.2:41911097-41911116 | None:intergenic | 50.0% | |
| GGTAAATGTGCGCAACAGGT+GGG | + | chr3.2:41911326-41911345 | MS.gene070177:intron | 50.0% | |
| TGGTAAATGTGCGCAACAGG+TGG | + | chr3.2:41911325-41911344 | MS.gene070177:intron | 50.0% | |
| TGTGGAAGGACCAGCAATGT+GGG | + | chr3.2:41910513-41910532 | MS.gene070177:CDS | 50.0% | |
| TGTTGATCTCTTGGGCCACT+AGG | + | chr3.2:41909007-41909026 | MS.gene070177:CDS | 50.0% | |
| TTGAGTAGTCTCGACAGGAC+AGG | - | chr3.2:41910873-41910892 | None:intergenic | 50.0% | |
| ! | AACCCAGGTACTTGATAGCC+AGG | - | chr3.2:41911125-41911144 | None:intergenic | 50.0% |
| ! | CAAAGGGCGTGAGAATTGCA+AGG | - | chr3.2:41910486-41910505 | None:intergenic | 50.0% |
| ! | GAAAGGCGCGAAAAACTCAC+AGG | - | chr3.2:41909287-41909306 | None:intergenic | 50.0% |
| ! | GGAATGTGTTGGGGTGTTTG+TGG | + | chr3.2:41911877-41911896 | MS.gene070177:intron | 50.0% |
| !! | AGAGCATTGACGGGCTGAAT+TGG | - | chr3.2:41911495-41911514 | None:intergenic | 50.0% |
| !! | GGAGCCTGCTTTTAGTGTTC+TGG | + | chr3.2:41909912-41909931 | MS.gene070177:CDS | 50.0% |
| !! | GTGATCACTGGTTCTGATGC+TGG | + | chr3.2:41908589-41908608 | MS.gene070177:CDS | 50.0% |
| !! | TGACGGGCTGAATTGGTGTA+TGG | - | chr3.2:41911488-41911507 | None:intergenic | 50.0% |
| AGGGTGCGTGAGAAGCTCAT+AGG | + | chr3.2:41909410-41909429 | MS.gene070177:intron | 55.0% | |
| AGGTGCAGGAACACCTTCAG+AGG | + | chr3.2:41908837-41908856 | MS.gene070177:CDS | 55.0% | |
| AGTCACAACGGGTGAGCAGA+AGG | + | chr3.2:41912475-41912494 | MS.gene070177:intron | 55.0% | |
| CACGCCCTTTGCAATTGCTG+TGG | + | chr3.2:41910495-41910514 | MS.gene070177:CDS | 55.0% | |
| CAGATAGACTGGCACAGGGA+AGG | - | chr3.2:41909962-41909981 | None:intergenic | 55.0% | |
| CTGCTCACCCGTTGTGACTT+AGG | - | chr3.2:41912474-41912493 | None:intergenic | 55.0% | |
| CTGTGGAAGGACCAGCAATG+TGG | + | chr3.2:41910512-41910531 | MS.gene070177:CDS | 55.0% | |
| GAGCCGCAATTGCTGTCTTC+GGG | + | chr3.2:41911517-41911536 | MS.gene070177:CDS | 55.0% | |
| GCGTGAGAAGCTCATAGGGT+GGG | + | chr3.2:41909415-41909434 | MS.gene070177:intron | 55.0% | |
| GGAGCCGCAATTGCTGTCTT+CGG | + | chr3.2:41911516-41911535 | MS.gene070177:CDS | 55.0% | |
| GGCCTGGCTATCAAGTACCT+GGG | + | chr3.2:41911120-41911139 | MS.gene070177:intron | 55.0% | |
| GGCTGGTAAATGTGCGCAAC+AGG | + | chr3.2:41911322-41911341 | MS.gene070177:intron | 55.0% | |
| GGGTGCGTGAGAAGCTCATA+GGG | + | chr3.2:41909411-41909430 | MS.gene070177:intron | 55.0% | |
| GGTCCCGAAGACAGCAATTG+CGG | - | chr3.2:41911523-41911542 | None:intergenic | 55.0% | |
| TATCCAGCAGCCCACATTGC+TGG | - | chr3.2:41910526-41910545 | None:intergenic | 55.0% | |
| TGCATAGGGCACGTGGGATA+GGG | + | chr3.2:41909391-41909410 | MS.gene070177:intron | 55.0% | |
| TGCGTGAGAAGCTCATAGGG+TGG | + | chr3.2:41909414-41909433 | MS.gene070177:intron | 55.0% | |
| TGGCCTGGCTATCAAGTACC+TGG | + | chr3.2:41911119-41911138 | MS.gene070177:intron | 55.0% | |
| !! | TGCGGCTCCAAGAGCATTGA+CGG | - | chr3.2:41911505-41911524 | None:intergenic | 55.0% |
| CCCACGTGCCCTATGCAGTT+CGG | - | chr3.2:41909388-41909407 | None:intergenic | 60.0% | |
| CCGAACTGCATAGGGCACGT+GGG | + | chr3.2:41909385-41909404 | MS.gene070177:intron | 60.0% | |
| CTGCATAGGGCACGTGGGAT+AGG | + | chr3.2:41909390-41909409 | MS.gene070177:intron | 60.0% | |
| GGCGCGAAAAACTCACAGGG+TGG | - | chr3.2:41909283-41909302 | None:intergenic | 60.0% | |
| GGTGTCTGGTGCAGTCGACA+AGG | - | chr3.2:41912259-41912278 | None:intergenic | 60.0% | |
| TCCGAACTGCATAGGGCACG+TGG | + | chr3.2:41909384-41909403 | MS.gene070177:intron | 60.0% | |
| !! | GCGGCTCCAAGAGCATTGAC+GGG | - | chr3.2:41911504-41911523 | None:intergenic | 60.0% |
| ATCCATGACGCGCGATGGCC+TGG | + | chr3.2:41911104-41911123 | MS.gene070177:intron | 65.0% | |
| ! | GGACCAGCAATGTGGGCTGC+TGG | + | chr3.2:41910520-41910539 | MS.gene070177:CDS | 65.0% |
| AGCCAGGCCATCGCGCGTCA+TGG | - | chr3.2:41911109-41911128 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 41908559 | 41912613 | 41908559 | ID=MS.gene070177 |
| chr3.2 | mRNA | 41908559 | 41912613 | 41908559 | ID=MS.gene070177.t1;Parent=MS.gene070177 |
| chr3.2 | exon | 41908559 | 41909080 | 41908559 | ID=MS.gene070177.t1.exon1;Parent=MS.gene070177.t1 |
| chr3.2 | CDS | 41908559 | 41909080 | 41908559 | ID=cds.MS.gene070177.t1;Parent=MS.gene070177.t1 |
| chr3.2 | exon | 41909823 | 41910048 | 41909823 | ID=MS.gene070177.t1.exon2;Parent=MS.gene070177.t1 |
| chr3.2 | CDS | 41909823 | 41910048 | 41909823 | ID=cds.MS.gene070177.t1;Parent=MS.gene070177.t1 |
| chr3.2 | exon | 41910362 | 41910584 | 41910362 | ID=MS.gene070177.t1.exon3;Parent=MS.gene070177.t1 |
| chr3.2 | CDS | 41910362 | 41910584 | 41910362 | ID=cds.MS.gene070177.t1;Parent=MS.gene070177.t1 |
| chr3.2 | exon | 41911344 | 41911557 | 41911344 | ID=MS.gene070177.t1.exon4;Parent=MS.gene070177.t1 |
| chr3.2 | CDS | 41911344 | 41911557 | 41911344 | ID=cds.MS.gene070177.t1;Parent=MS.gene070177.t1 |
| chr3.2 | exon | 41912602 | 41912613 | 41912602 | ID=MS.gene070177.t1.exon5;Parent=MS.gene070177.t1 |
| chr3.2 | CDS | 41912602 | 41912613 | 41912602 | ID=cds.MS.gene070177.t1;Parent=MS.gene070177.t1 |
| Gene Sequence |
| Protein sequence |
