AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05470.t1 MTR_6g084620 92.529 174 10 2 1 174 1 171 1.08e-104 297
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05470.t1 AT1G73885 58.824 85 33 2 91 173 95 179 1.96e-26 99.8

Find 51 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCACCTAGATTGTAGTTTA+TGG 0.193554 6.2:-83182161 None:intergenic
GGAGAATGGTTGTGGATTCT+TGG 0.288850 6.2:+83180380 MS.gene05470:CDS
AAAGAGCCTGATTTCTTTGA+AGG 0.327839 6.2:+83180329 MS.gene05470:CDS
CAACAGTGGTTGTTGGTTGT+TGG 0.374252 6.2:-83180217 None:intergenic
TGGAATACTGTTGGGTTTGT+TGG 0.381813 6.2:+83180359 MS.gene05470:CDS
TATGTCCGATTCAGATGTTT+CGG 0.399566 6.2:-83182245 None:intergenic
ATGTCCGATTCAGATGTTTC+GGG 0.417672 6.2:-83182244 None:intergenic
GGTATTTCAACTTCATTCCT+TGG 0.418384 6.2:-83180254 None:intergenic
TCCTCATCAACAGTGGTTGT+TGG 0.422081 6.2:-83180224 None:intergenic
GTTCTTCTTCTTGAAGAAGA+TGG 0.430048 6.2:-83180146 None:intergenic
AGATGGTGGTAGGAGGGTGT+AGG 0.431318 6.2:-83180129 None:intergenic
TGAGGACCTTCAAAGAAATC+AGG 0.443462 6.2:-83180335 None:intergenic
TGATTGCAGGTACTCGGTGG+TGG 0.443641 6.2:+83182130 MS.gene05470:intron
GGTTTGTTGGAGAATGGTTG+TGG 0.447045 6.2:+83180372 MS.gene05470:CDS
GATGGTGGTAGGAGGGTGTA+GGG 0.455691 6.2:-83180128 None:intergenic
TAAGGAAACTCCTGCATACA+AGG 0.456201 6.2:+83182192 MS.gene05470:CDS
CTGTTGGGTTTGTTGGAGAA+TGG 0.461075 6.2:+83180366 MS.gene05470:CDS
GGTGTAGGGTGTTGTTGTGG+TGG 0.465718 6.2:-83180114 None:intergenic
GAGGGTGTAGGGTGTTGTTG+TGG 0.482266 6.2:-83180117 None:intergenic
GTCCTCAGTGGAATACTGTT+GGG 0.482795 6.2:+83180351 MS.gene05470:CDS
TTGTGGTGGTCTTGTTGTAG+AGG 0.490468 6.2:-83180100 None:intergenic
GTAGCTACATGCGGTGGTGC+AGG 0.492658 6.2:+83180074 MS.gene05470:CDS
GATTGAGATTCCTTGTATGC+AGG 0.493350 6.2:-83182202 None:intergenic
AGGAGCTACCTCTGTAGGAT+TGG 0.496936 6.2:-83182275 None:intergenic
ACAACCCGAAACATCTGAAT+CGG 0.508079 6.2:+83182240 MS.gene05470:CDS
GCAGCCATAAACTACAATCT+AGG 0.509629 6.2:+83182157 MS.gene05470:CDS
CCAGGAGGTCTCCATTCAAA+AGG 0.515241 6.2:-83180299 None:intergenic
TGAAGAAGATGGTGGTAGGA+GGG 0.524857 6.2:-83180135 None:intergenic
AAACTAGGAGCTACCTCTGT+AGG 0.526704 6.2:-83182280 None:intergenic
AGATTTCTTCACGTTCAAGA+AGG 0.538426 6.2:+83180192 MS.gene05470:CDS
GGTCCTCAGTGGAATACTGT+TGG 0.542352 6.2:+83180350 MS.gene05470:CDS
CAATCTTCATCAGAGTAAAA+CGG 0.547523 6.2:-83180275 None:intergenic
TTGAAGAAGATGGTGGTAGG+AGG 0.559429 6.2:-83180136 None:intergenic
TCATCGTGATTGCAGGTACT+CGG 0.560112 6.2:+83182124 MS.gene05470:intron
TGCACCACCGCATGTAGCTA+CGG 0.561836 6.2:-83180072 None:intergenic
GAATGGTTGTGGATTCTTGG+TGG 0.562063 6.2:+83180383 MS.gene05470:CDS
ACCAACAACCACTGTTGATG+AGG 0.563474 6.2:+83180223 MS.gene05470:CDS
TTCTATTTCCTCATCAACAG+TGG 0.566937 6.2:-83180231 None:intergenic
TGAACGGACTAGTTCAAACT+AGG 0.568550 6.2:-83182295 None:intergenic
GATTGCAGGTACTCGGTGGT+GGG 0.579381 6.2:+83182131 MS.gene05470:intron
TCAGGCTCTTTGTAAGTACC+AGG 0.580767 6.2:-83180317 None:intergenic
CTTCTTCTTGAAGAAGATGG+TGG 0.599113 6.2:-83180143 None:intergenic
ATTTCTTTGAAGGTCCTCAG+TGG 0.623902 6.2:+83180339 MS.gene05470:CDS
TTCTTGAAGAAGATGGTGGT+AGG 0.629602 6.2:-83180139 None:intergenic
GCATTCACCGTAGCTACATG+CGG 0.676586 6.2:+83180065 MS.gene05470:CDS
TCGTGATTGCAGGTACTCGG+TGG 0.679621 6.2:+83182127 MS.gene05470:intron
TTCACCGTAGCTACATGCGG+TGG 0.691064 6.2:+83180068 MS.gene05470:CDS
GGCTCTTTGTAAGTACCAGG+AGG 0.691981 6.2:-83180314 None:intergenic
TTGATGAGGAAATAGAACCA+AGG 0.699980 6.2:+83180237 MS.gene05470:CDS
ATTCGAGTCCAATCCTACAG+AGG 0.715767 6.2:+83182267 MS.gene05470:CDS
AACCCAACAGTATTCCACTG+AGG 0.795226 6.2:-83180353 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATCTTCTTACAAAAAAA+AGG + chr6.2:83180797-83180816 MS.gene05470:intron 15.0%
!!! TTTTAGTATAAGAAGAAATT+TGG + chr6.2:83181121-83181140 MS.gene05470:intron 15.0%
!!! TTTTAGTATTAGAAGAAATT+TGG + chr6.2:83181171-83181190 MS.gene05470:intron 15.0%
!! AAAAACTTCCTAAATAGATT+AGG + chr6.2:83181947-83181966 MS.gene05470:intron 20.0%
!!! ACTTAGTTCATATTTTGAAT+TGG - chr6.2:83181380-83181399 None:intergenic 20.0%
!!! AGTTAACTTTTGAGTTTATT+TGG + chr6.2:83181204-83181223 MS.gene05470:intron 20.0%
!!! TAATCTATTTAGGAAGTTTT+TGG - chr6.2:83181948-83181967 None:intergenic 20.0%
! AATAAGTTGTTTATCCAAAC+AGG - chr6.2:83180554-83180573 None:intergenic 25.0%
! AGTTAAAATGTTTCGATACA+AGG + chr6.2:83180657-83180676 MS.gene05470:intron 25.0%
! ATAAGTTGTTTATCCAAACA+GGG - chr6.2:83180553-83180572 None:intergenic 25.0%
! CATAAGTAACTAGAACAATT+GGG + chr6.2:83181441-83181460 MS.gene05470:intron 25.0%
! TAGTATAAGAAGAAATTTGG+AGG + chr6.2:83181124-83181143 MS.gene05470:intron 25.0%
! TCATAAGTAACTAGAACAAT+TGG + chr6.2:83181440-83181459 MS.gene05470:intron 25.0%
!! CTTGAGTATTAGAAGAATTT+TGG + chr6.2:83180515-83180534 MS.gene05470:intron 25.0%
!! GTTTTCATAAGTATCTTGAA+GGG + chr6.2:83180828-83180847 MS.gene05470:intron 25.0%
!! TGTTTTCATAAGTATCTTGA+AGG + chr6.2:83180827-83180846 MS.gene05470:intron 25.0%
!!! TAAGTTGTTTTAACCCATTT+AGG + chr6.2:83180682-83180701 MS.gene05470:intron 25.0%
!!! TAGTTCATATTTTGAATTGG+CGG - chr6.2:83181377-83181396 None:intergenic 25.0%
!!! TATCTTCGAAAACTTGTTTT+AGG - chr6.2:83181783-83181802 None:intergenic 25.0%
AATGTGTTGTCTAGAGAATT+TGG + chr6.2:83182048-83182067 MS.gene05470:intron 30.0%
ACTACCAAGGTTTCTATATT+AGG - chr6.2:83181073-83181092 None:intergenic 30.0%
AGTTTCTGCTAATGAATTGT+AGG + chr6.2:83181620-83181639 MS.gene05470:intron 30.0%
ATGTGTTGTCTAGAGAATTT+GGG + chr6.2:83182049-83182068 MS.gene05470:intron 30.0%
CAAACATGCCTAATCTATTT+AGG - chr6.2:83181958-83181977 None:intergenic 30.0%
CAATCTTCATCAGAGTAAAA+CGG - chr6.2:83180278-83180297 None:intergenic 30.0%
GATCGAAATATTAGATCATG+TGG - chr6.2:83181529-83181548 None:intergenic 30.0%
GCAGAGCAATAAAATTTGAA+TGG - chr6.2:83181853-83181872 None:intergenic 30.0%
GTATTGTGCGTGAATATTAA+TGG - chr6.2:83180990-83181009 None:intergenic 30.0%
TAAGCCTAATATAGAAACCT+TGG + chr6.2:83181066-83181085 MS.gene05470:intron 30.0%
TATAAGAAGAAATTTGGAGG+AGG + chr6.2:83181689-83181708 MS.gene05470:intron 30.0%
TCGCAAAATAGCAAAAGAAA+AGG - chr6.2:83181587-83181606 None:intergenic 30.0%
TCTAATATTTCGATCCATCT+TGG + chr6.2:83181534-83181553 MS.gene05470:intron 30.0%
! GTTTGTTGAATTTAAGCACA+AGG + chr6.2:83181886-83181905 MS.gene05470:intron 30.0%
! TTTGTTTGTTGCTGAATTGT+TGG + chr6.2:83180450-83180469 MS.gene05470:intron 30.0%
!!! TTGTTTTAACCCATTTAGGT+TGG + chr6.2:83180686-83180705 MS.gene05470:intron 30.0%
AAAGAGCCTGATTTCTTTGA+AGG + chr6.2:83180329-83180348 MS.gene05470:CDS 35.0%
AATACACACACATACTACCA+AGG - chr6.2:83181086-83181105 None:intergenic 35.0%
AGATTTCTTCACGTTCAAGA+AGG + chr6.2:83180192-83180211 MS.gene05470:CDS 35.0%
AGTAACTAGAACAATTGGGT+TGG + chr6.2:83181445-83181464 MS.gene05470:intron 35.0%
CAACTTATTGTGCAGCTTAT+AGG + chr6.2:83180565-83180584 MS.gene05470:intron 35.0%
CACTTATCTAGGAACATGTT+TGG + chr6.2:83181236-83181255 MS.gene05470:intron 35.0%
CTAGTCATATATCGACATGT+AGG + chr6.2:83182080-83182099 MS.gene05470:intron 35.0%
CTGATGACTGATATCATATC+AGG - chr6.2:83180943-83180962 None:intergenic 35.0%
CTTGAAGGGTTTGTGATATA+CGG + chr6.2:83180842-83180861 MS.gene05470:intron 35.0%
GCGTGAATATTAATGGTTGT+TGG - chr6.2:83180983-83181002 None:intergenic 35.0%
GGTATTTCAACTTCATTCCT+TGG - chr6.2:83180257-83180276 None:intergenic 35.0%
GTTCTTCTTCTTGAAGAAGA+TGG - chr6.2:83180149-83180168 None:intergenic 35.0%
TAGATCATGTGGCAACAATT+AGG - chr6.2:83181518-83181537 None:intergenic 35.0%
TATAAGTTCATCGTGATTGC+AGG + chr6.2:83182117-83182136 MS.gene05470:intron 35.0%
TATGTCCGATTCAGATGTTT+CGG - chr6.2:83182248-83182267 None:intergenic 35.0%
TGCACCTAGATTGTAGTTTA+TGG - chr6.2:83182164-83182183 None:intergenic 35.0%
TTCTATTTCCTCATCAACAG+TGG - chr6.2:83180234-83180253 None:intergenic 35.0%
TTGATGAGGAAATAGAACCA+AGG + chr6.2:83180237-83180256 MS.gene05470:CDS 35.0%
TTTGAACTTTGACGAAAGCA+CGG + chr6.2:83181271-83181290 MS.gene05470:intron 35.0%
! CGTTTTACTCTGATGAAGAT+TGG + chr6.2:83180276-83180295 MS.gene05470:CDS 35.0%
! TCTAGGTGCATCAGATTTTA+AGG + chr6.2:83182174-83182193 MS.gene05470:CDS 35.0%
!!! ATGAAGATTGGCCTTTTGAA+TGG + chr6.2:83180288-83180307 MS.gene05470:CDS 35.0%
!!! TCTTACGAGTTGGTTTTGTA+AGG + chr6.2:83180893-83180912 MS.gene05470:intron 35.0%
ACAACCCGAAACATCTGAAT+CGG + chr6.2:83182240-83182259 MS.gene05470:CDS 40.0%
ATGTCCGATTCAGATGTTTC+GGG - chr6.2:83182247-83182266 None:intergenic 40.0%
CATCAGAGCCTATCCATTAA+GGG + chr6.2:83180957-83180976 MS.gene05470:intron 40.0%
CGGTATCTCACAAGTACTTA+TGG + chr6.2:83180862-83180881 MS.gene05470:intron 40.0%
CTTCTTCTTGAAGAAGATGG+TGG - chr6.2:83180146-83180165 None:intergenic 40.0%
GAAGAAGATATGACCCTGTT+TGG + chr6.2:83180537-83180556 MS.gene05470:intron 40.0%
GATTGAGATTCCTTGTATGC+AGG - chr6.2:83182205-83182224 None:intergenic 40.0%
GCAGCCATAAACTACAATCT+AGG + chr6.2:83182157-83182176 MS.gene05470:CDS 40.0%
GGCGACATAATCACTTATCT+AGG + chr6.2:83181225-83181244 MS.gene05470:intron 40.0%
TAACCCACTCAAATTGACAC+CGG - chr6.2:83180776-83180795 None:intergenic 40.0%
TAAGGAAACTCCTGCATACA+AGG + chr6.2:83182192-83182211 MS.gene05470:CDS 40.0%
TAATGGTTGTTGGCCCTTAA+TGG - chr6.2:83180973-83180992 None:intergenic 40.0%
TCATCAGAGCCTATCCATTA+AGG + chr6.2:83180956-83180975 MS.gene05470:intron 40.0%
TCTCTAGACAACACATTCCT+TGG - chr6.2:83182045-83182064 None:intergenic 40.0%
TGAGGACCTTCAAAGAAATC+AGG - chr6.2:83180338-83180357 None:intergenic 40.0%
TGGAATACTGTTGGGTTTGT+TGG + chr6.2:83180359-83180378 MS.gene05470:CDS 40.0%
! ATTTCTTTGAAGGTCCTCAG+TGG + chr6.2:83180339-83180358 MS.gene05470:CDS 40.0%
! TTCTTGAAGAAGATGGTGGT+AGG - chr6.2:83180142-83180161 None:intergenic 40.0%
!! GATTCTTGGTGGTCTTTTTG+CGG + chr6.2:83180394-83180413 MS.gene05470:CDS 40.0%
AAACTAGGAGCTACCTCTGT+AGG - chr6.2:83182283-83182302 None:intergenic 45.0%
AACCCAACAGTATTCCACTG+AGG - chr6.2:83180356-83180375 None:intergenic 45.0%
ACCAACAACCACTGTTGATG+AGG + chr6.2:83180223-83180242 MS.gene05470:CDS 45.0%
ATTCGAGTCCAATCCTACAG+AGG + chr6.2:83182267-83182286 MS.gene05470:CDS 45.0%
CGTTCGTTTCTTTGATGCCA+AGG + chr6.2:83182025-83182044 MS.gene05470:intron 45.0%
CTCTCACGCTCAACACTATT+GGG - chr6.2:83181012-83181031 None:intergenic 45.0%
GAATCGAACATGAGACCTTG+AGG - chr6.2:83180750-83180769 None:intergenic 45.0%
GAATGGTTGTGGATTCTTGG+TGG + chr6.2:83180383-83180402 MS.gene05470:CDS 45.0%
GGAACATGTTTGGATTGACG+AGG + chr6.2:83181246-83181265 MS.gene05470:intron 45.0%
GGACTCATCATCTTACGAGT+TGG + chr6.2:83180883-83180902 MS.gene05470:intron 45.0%
GGAGAATGGTTGTGGATTCT+TGG + chr6.2:83180380-83180399 MS.gene05470:CDS 45.0%
GTCCTCAGTGGAATACTGTT+GGG + chr6.2:83180351-83180370 MS.gene05470:CDS 45.0%
GTCTCATGTTCGATTCTCTC+CGG + chr6.2:83180754-83180773 MS.gene05470:intron 45.0%
TCAGGCTCTTTGTAAGTACC+AGG - chr6.2:83180320-83180339 None:intergenic 45.0%
TCATCGTGATTGCAGGTACT+CGG + chr6.2:83182124-83182143 MS.gene05470:intron 45.0%
TCCTCATCAACAGTGGTTGT+TGG - chr6.2:83180227-83180246 None:intergenic 45.0%
TCGCGAAAACACAACCAAGA+TGG - chr6.2:83181551-83181570 None:intergenic 45.0%
TTTCTTGCCAAAATCGCGCT+GGG + chr6.2:83181329-83181348 MS.gene05470:intron 45.0%
! CAACAGTGGTTGTTGGTTGT+TGG - chr6.2:83180220-83180239 None:intergenic 45.0%
! CAATAGTGTTGAGCGTGAGA+GGG + chr6.2:83181011-83181030 MS.gene05470:intron 45.0%
! GTTGTTGGCCCTTAATGGAT+AGG - chr6.2:83180968-83180987 None:intergenic 45.0%
! TCTCCGGTGTCAATTTGAGT+GGG + chr6.2:83180770-83180789 MS.gene05470:intron 45.0%
! TGAAGAAGATGGTGGTAGGA+GGG - chr6.2:83180138-83180157 None:intergenic 45.0%
! TTGAAGAAGATGGTGGTAGG+AGG - chr6.2:83180139-83180158 None:intergenic 45.0%
!! CTGTTGGGTTTGTTGGAGAA+TGG + chr6.2:83180366-83180385 MS.gene05470:CDS 45.0%
!! GGTTTGTTGGAGAATGGTTG+TGG + chr6.2:83180372-83180391 MS.gene05470:CDS 45.0%
!! TTAACCCATTTAGGTTGGCC+TGG + chr6.2:83180691-83180710 MS.gene05470:intron 45.0%
!! TTGTGGTGGTCTTGTTGTAG+AGG - chr6.2:83180103-83180122 None:intergenic 45.0%
AATTGGCGGTGAGTCTGACA+TGG - chr6.2:83181363-83181382 None:intergenic 50.0%
ACCACCAGGCCAACCTAAAT+GGG - chr6.2:83180698-83180717 None:intergenic 50.0%
AGGAGCTACCTCTGTAGGAT+TGG - chr6.2:83182278-83182297 None:intergenic 50.0%
CCAGGAGGTCTCCATTCAAA+AGG - chr6.2:83180302-83180321 None:intergenic 50.0%
CCTCTCACGCTCAACACTAT+TGG - chr6.2:83181013-83181032 None:intergenic 50.0%
GCATTCACCGTAGCTACATG+CGG + chr6.2:83180065-83180084 MS.gene05470:CDS 50.0%
GGCTCTTTGTAAGTACCAGG+AGG - chr6.2:83180317-83180336 None:intergenic 50.0%
GGTCCTCAGTGGAATACTGT+TGG + chr6.2:83180350-83180369 MS.gene05470:CDS 50.0%
GTTTCTTGCCAAAATCGCGC+TGG + chr6.2:83181328-83181347 MS.gene05470:intron 50.0%
TACCACCAGGCCAACCTAAA+TGG - chr6.2:83180699-83180718 None:intergenic 50.0%
TATGCGTGAAGGGGCTTACT+GGG + chr6.2:83181036-83181055 MS.gene05470:intron 50.0%
TCGAACATGAGACCTTGAGG+AGG - chr6.2:83180747-83180766 None:intergenic 50.0%
! CAAATGACCCAGCGCGATTT+TGG - chr6.2:83181339-83181358 None:intergenic 50.0%
! CCAATAGTGTTGAGCGTGAG+AGG + chr6.2:83181010-83181029 MS.gene05470:intron 50.0%
! CCTTTTGAATGGAGACCTCC+TGG + chr6.2:83180299-83180318 MS.gene05470:CDS 50.0%
! CTCTCCGGTGTCAATTTGAG+TGG + chr6.2:83180769-83180788 MS.gene05470:intron 50.0%
! TGAGAGGGTGTATGCGTGAA+GGG + chr6.2:83181026-83181045 MS.gene05470:intron 50.0%
!! GTGGTATTGACTTGGGACCT+GGG + chr6.2:83180713-83180732 MS.gene05470:intron 50.0%
!! TGGCCTGGTGGTATTGACTT+GGG + chr6.2:83180706-83180725 MS.gene05470:intron 50.0%
!! TTGGCCTGGTGGTATTGACT+TGG + chr6.2:83180705-83180724 MS.gene05470:intron 50.0%
ATGCGTGAAGGGGCTTACTG+GGG + chr6.2:83181037-83181056 MS.gene05470:intron 55.0%
GGTCCCAAGTCAATACCACC+AGG - chr6.2:83180712-83180731 None:intergenic 55.0%
GTATGCGTGAAGGGGCTTAC+TGG + chr6.2:83181035-83181054 MS.gene05470:intron 55.0%
TCGTGATTGCAGGTACTCGG+TGG + chr6.2:83182127-83182146 MS.gene05470:intron 55.0%
TGCACCACCGCATGTAGCTA+CGG - chr6.2:83180075-83180094 None:intergenic 55.0%
TTCACCGTAGCTACATGCGG+TGG + chr6.2:83180068-83180087 MS.gene05470:CDS 55.0%
! AGATGGTGGTAGGAGGGTGT+AGG - chr6.2:83180132-83180151 None:intergenic 55.0%
! GAGAGGGTGTATGCGTGAAG+GGG + chr6.2:83181027-83181046 MS.gene05470:intron 55.0%
! GATGGTGGTAGGAGGGTGTA+GGG - chr6.2:83180131-83180150 None:intergenic 55.0%
! GATTGCAGGTACTCGGTGGT+GGG + chr6.2:83182131-83182150 MS.gene05470:intron 55.0%
! GTGAGAGGGTGTATGCGTGA+AGG + chr6.2:83181025-83181044 MS.gene05470:intron 55.0%
! TGATTGCAGGTACTCGGTGG+TGG + chr6.2:83182130-83182149 MS.gene05470:intron 55.0%
!! ACCCATTTAGGTTGGCCTGG+TGG + chr6.2:83180694-83180713 MS.gene05470:intron 55.0%
!! GAGGGTGTAGGGTGTTGTTG+TGG - chr6.2:83180120-83180139 None:intergenic 55.0%
!! GGTGGTATTGACTTGGGACC+TGG + chr6.2:83180712-83180731 MS.gene05470:intron 55.0%
!! GGTGTAGGGTGTTGTTGTGG+TGG - chr6.2:83180117-83180136 None:intergenic 55.0%
GTAGCTACATGCGGTGGTGC+AGG + chr6.2:83180074-83180093 MS.gene05470:CDS 60.0%
! TGGGAGTGTGCTCCTCCTCA+AGG + chr6.2:83180732-83180751 MS.gene05470:intron 60.0%
! TTGAGGAGGAGCACACTCCC+AGG - chr6.2:83180733-83180752 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 83180062 83182309 83180062 ID=MS.gene05470
chr6.2 mRNA 83180062 83182309 83180062 ID=MS.gene05470.t1;Parent=MS.gene05470
chr6.2 exon 83180062 83180415 83180062 ID=MS.gene05470.t1.exon1;Parent=MS.gene05470.t1
chr6.2 CDS 83180062 83180415 83180062 ID=cds.MS.gene05470.t1;Parent=MS.gene05470.t1
chr6.2 exon 83182139 83182309 83182139 ID=MS.gene05470.t1.exon2;Parent=MS.gene05470.t1
chr6.2 CDS 83182139 83182309 83182139 ID=cds.MS.gene05470.t1;Parent=MS.gene05470.t1
Gene Sequence

>MS.gene05470

ATGGCATTCACCGTAGCTACATGCGGTGGTGCAGGAATCCTCTACAACAAGACCACCACAACAACACCCTACACCCTCCTACCACCATCTTCTTCAAGAAGAAGAACACTTCACATAGTTTCAGCTAAGAAGATTTCTTCACGTTCAAGAAGGAACCAACAACCAACAACCACTGTTGATGAGGAAATAGAACCAAGGAATGAAGTTGAAATACCGTTTTACTCTGATGAAGATTGGCCTTTTGAATGGAGACCTCCTGGTACTTACAAAGAGCCTGATTTCTTTGAAGGTCCTCAGTGGAATACTGTTGGGTTTGTTGGAGAATGGTTGTGGATTCTTGGTGGTCTTTTTGCGGTATAATTCTACTTCTATCTTGTTTTTCTTTTGTTTTGTTTGTTGCTGAATTGTTGGTGTGTTATTTGTATGTGTGTGTGTTTTGATTGAGTGATTGTTCTTGAGTATTAGAAGAATTTTGGAAGAAGATATGACCCTGTTTGGATAAACAACTTATTGTGCAGCTTATAGGATAAGTGTATATTATATAAGTTGTTATGAATAAGCTATTTCTATAACACAAGATTACAAGATAAAATAAAGTTAAAATGTTTCGATACAAGGTATAAGTTGTTTTAACCCATTTAGGTTGGCCTGGTGGTATTGACTTGGGACCTGGGAGTGTGCTCCTCCTCAAGGTCTCATGTTCGATTCTCTCCGGTGTCAATTTGAGTGGGTTAATTTATCTTCTTACAAAAAAAAGGTATAAGTTGTTTTCATAAGTATCTTGAAGGGTTTGTGATATACGGTATCTCACAAGTACTTATGGACTCATCATCTTACGAGTTGGTTTTGTAAGGATTAATTAAATATAATATAAAAAACCTGATATGATATCAGTCATCAGAGCCTATCCATTAAGGGCCAACAACCATTAATATTCACGCACAATACCCAATAGTGTTGAGCGTGAGAGGGTGTATGCGTGAAGGGGCTTACTGGGGATGAGTTAAGCCTAATATAGAAACCTTGGTAGTATGTGTGTGTATTTTGATTGACTGATTTTTTTAGTATAAGAAGAAATTTGGTGTGTGTGTATTTTGATTGACTGATTTTTTTAGTATTAGAAGAAATTTGGAAGAGTGCAGAGTTAACTTTTGAGTTTATTTGGCGACATAATCACTTATCTAGGAACATGTTTGGATTGACGAGGAGTTTGAACTTTGACGAAAGCACGGTGACATCGTAATTTTGTTGAAACTCTGAAGTGTTGTTTCTTGCCAAAATCGCGCTGGGTCATTTGACCATGTCAGACTCACCGCCAATTCAAAATATGAACTAAGTAGTTAGAAAAATTATAGTGAAAATAAAGTAGTGAGAAAAATCATAAGTAACTAGAACAATTGGGTTGGATTGTGATGTTAAGATTTTTTTTATGTCTATATGACTACATCATGATCCTAATTGTTGCCACATGATCTAATATTTCGATCCATCTTGGTTGTGTTTTCGCGATATGATTTAACTGCCTTTTCTTTTGCTATTTTGCGACTTCAAGCTTTCGAGTTTCTGCTAATGAATTGTAGGTGTGTCATGTTTATATGTGTGTTTTCTGTGAGTGTTTTTTTTTTAGTATAAGAAGAAATTTGGAGGAGGATAGAGTTTAATTTTGAGTATATGCAGTGACAATTTCACTTATATAAGTATTTAGAAAAGTAAATATTCCTAAAACAAGTTTTCGAAGATAGAATTACTTATGTGAATTTTATCTAATCTTCTTTCTTTTATTTTCATCCATTCAAATTTTATTGCTCTGCTAAAATGTGAACAGTTTGTTGAATTTAAGCACAAGGTTTGTTTAATAGATTAGTACTTTATTAAGTTGTATGCCAAAAACTTCCTAAATAGATTAGGCATGTTTGTGAGAATACTCTGTTGTTTCTGCATTTCTATTTCTTGTGTTCATATTCGTTCGTTTCTTTGATGCCAAGGAATGTGTTGTCTAGAGAATTTGGGTTGCTAATCTAGTCATATATCGACATGTAGGTTCAGTTATAAATTTATAAGTTCATCGTGATTGCAGGTACTCGGTGGTGGGTATGCAGCCATAAACTACAATCTAGGTGCATCAGATTTTAAGGAAACTCCTGCATACAAGGAATCTCAATCTCAAGAACTTTTAGAACAACCCGAAACATCTGAATCGGACATATTCGAGTCCAATCCTACAGAGGTAGCTCCTAGTTTGAACTAG

Protein sequence

>MS.gene05470.t1

MAFTVATCGGAGILYNKTTTTTPYTLLPPSSSRRRTLHIVSAKKISSRSRRNQQPTTTVDEEIEPRNEVEIPFYSDEDWPFEWRPPGTYKEPDFFEGPQWNTVGFVGEWLWILGGLFAVLGGGYAAINYNLGASDFKETPAYKESQSQELLEQPETSESDIFESNPTEVAPSLN