AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene070500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070500.t1 MTR_5g085580 98.257 459 6 2 1 457 1 459 0.0 915
MS.gene070500.t1 MTR_1g056640 63.252 449 154 4 20 457 35 483 0.0 578
MS.gene070500.t1 MTR_3g080410 72.989 348 94 0 11 358 14 361 0.0 529
MS.gene070500.t1 MTR_6g088885 39.496 476 260 5 7 475 5 459 1.70e-120 362
MS.gene070500.t1 MTR_1g031900 41.991 462 238 5 6 461 5 442 1.80e-120 362
MS.gene070500.t1 MTR_1g031900 41.991 462 238 5 6 461 5 442 1.90e-120 362
MS.gene070500.t1 MTR_3g065460 40.558 466 250 4 1 463 3 444 2.02e-118 356
MS.gene070500.t1 MTR_8g012400 39.525 463 257 7 6 461 9 455 1.47e-117 353
MS.gene070500.t1 MTR_4g132280 42.081 442 230 6 23 461 45 463 1.74e-117 355
MS.gene070500.t1 MTR_7g053500 40.455 440 243 6 24 458 27 452 1.61e-115 348
MS.gene070500.t1 MTR_4g069940 41.648 437 242 4 23 458 29 453 2.15e-115 347
MS.gene070500.t1 MTR_4g088155 37.313 469 271 6 1 461 1 454 8.24e-112 338
MS.gene070500.t1 MTR_4g083500 41.348 445 251 8 22 461 43 482 2.44e-110 337
MS.gene070500.t1 MTR_5g078200 38.961 462 254 4 6 463 6 443 8.88e-110 339
MS.gene070500.t1 MTR_3g116510 38.865 458 262 6 3 458 7 448 1.24e-108 330
MS.gene070500.t1 MTR_8g085720 37.961 461 259 5 6 461 7 445 9.13e-108 329
MS.gene070500.t1 MTR_5g078200 39.862 434 233 4 34 463 1 410 1.55e-105 327
MS.gene070500.t1 MTR_8g102340 38.612 461 213 6 23 476 28 425 3.03e-105 322
MS.gene070500.t1 MTR_3g083580 36.422 464 263 7 7 463 7 445 6.12e-105 322
MS.gene070500.t1 MTR_4g084480 45.187 374 191 5 9 375 12 378 8.92e-104 315
MS.gene070500.t1 MTR_4g084480 48.246 342 168 4 9 343 5 344 1.66e-103 314
MS.gene070500.t1 MTR_7g026340 40.492 447 244 9 15 458 15 442 1.66e-103 317
MS.gene070500.t1 MTR_4g084480 48.246 342 168 4 9 343 12 351 2.58e-103 314
MS.gene070500.t1 MTR_1g077990 50.617 324 156 4 18 340 26 346 3.30e-101 309
MS.gene070500.t1 MTR_1g022160 35.408 466 260 6 23 463 24 473 1.52e-99 307
MS.gene070500.t1 MTR_1g022160 35.560 464 258 6 23 461 24 471 2.19e-99 307
MS.gene070500.t1 MTR_7g053500 40.409 391 214 6 76 461 2 378 7.98e-99 302
MS.gene070500.t1 MTR_1g022160 35.217 460 257 6 23 457 24 467 1.74e-97 302
MS.gene070500.t1 MTR_8g012400 40.000 390 214 6 76 461 2 375 3.78e-97 298
MS.gene070500.t1 MTR_4g010200 45.679 324 174 2 21 343 31 353 2.22e-96 296
MS.gene070500.t1 MTR_2g019345 47.076 342 176 5 1 340 1 339 4.77e-96 295
MS.gene070500.t1 MTR_4g052970 46.177 327 169 4 19 342 25 347 9.59e-96 294
MS.gene070500.t1 MTR_2g086530 44.083 338 181 4 9 342 12 345 2.74e-93 288
MS.gene070500.t1 MTR_2g086530 44.720 322 173 3 22 342 7 324 1.07e-92 286
MS.gene070500.t1 MTR_4g114850 45.483 321 173 2 21 340 24 343 3.99e-88 274
MS.gene070500.t1 MTR_4g114850 45.483 321 173 2 21 340 24 343 4.06e-88 274
MS.gene070500.t1 MTR_4g114850 45.483 321 173 2 21 340 24 343 7.50e-88 274
MS.gene070500.t1 MTR_1g007810 43.695 341 182 6 16 351 9 344 4.06e-87 271
MS.gene070500.t1 MTR_3g116510 42.424 330 174 4 129 458 1 314 7.78e-85 264
MS.gene070500.t1 MTR_1g022160 39.450 327 191 4 23 345 24 347 1.52e-80 256
MS.gene070500.t1 MTR_4g076570 42.056 321 179 4 20 340 19 332 7.33e-79 250
MS.gene070500.t1 MTR_1g052430 43.614 321 168 7 23 340 32 342 7.20e-77 246
MS.gene070500.t1 MTR_4g076470 40.419 334 183 8 6 338 6 324 3.85e-76 242
MS.gene070500.t1 MTR_4g076490 41.379 319 172 7 23 340 97 401 9.39e-75 241
MS.gene070500.t1 MTR_4g076255 40.854 328 180 7 13 340 15 328 8.03e-74 236
MS.gene070500.t1 MTR_4g076440 40.476 336 184 8 6 340 6 326 1.19e-73 235
MS.gene070500.t1 MTR_2g034480 42.342 333 177 9 10 338 14 335 1.90e-73 236
MS.gene070500.t1 MTR_4g076500 39.936 313 179 3 20 332 75 378 2.37e-73 237
MS.gene070500.t1 MTR_4g076430 40.356 337 183 9 6 340 6 326 3.97e-73 234
MS.gene070500.t1 MTR_7g081350 38.024 334 193 7 10 338 9 333 1.18e-68 223
MS.gene070500.t1 MTR_2g034470 39.264 326 186 8 15 338 23 338 1.42e-68 223
MS.gene070500.t1 MTR_2g027560 34.598 448 250 15 23 458 28 444 3.41e-66 221
MS.gene070500.t1 MTR_2g034470 38.907 311 179 7 30 338 2 303 2.29e-65 214
MS.gene070500.t1 MTR_4g112025 32.272 471 278 19 2 459 9 451 1.82e-64 217
MS.gene070500.t1 MTR_1g053320 33.619 467 268 18 7 460 15 452 4.32e-64 215
MS.gene070500.t1 MTR_2g034440 38.272 324 188 8 15 336 15 328 5.09e-64 211
MS.gene070500.t1 MTR_7g081370 36.418 335 190 8 4 338 10 321 3.20e-61 203
MS.gene070500.t1 MTR_1g010120 32.851 484 277 20 7 476 10 459 1.43e-60 206
MS.gene070500.t1 MTR_8g092070 30.126 478 289 18 4 463 6 456 1.06e-57 201
MS.gene070500.t1 MTR_4g124440 30.704 469 283 15 4 458 3 443 2.45e-57 197
MS.gene070500.t1 MTR_3g031770 32.127 442 265 12 23 458 27 439 5.39e-57 196
MS.gene070500.t1 MTR_3g095050 32.826 460 251 21 23 463 34 454 1.29e-56 195
MS.gene070500.t1 MTR_7g085390 31.317 463 268 19 23 471 26 452 2.52e-54 189
MS.gene070500.t1 MTR_3g108600 30.803 461 258 15 10 458 18 429 6.87e-54 187
MS.gene070500.t1 MTR_6g032820 32.426 441 254 16 23 448 26 437 8.89e-54 187
MS.gene070500.t1 MTR_4g134280 34.540 359 193 14 111 458 3 330 4.34e-44 159
MS.gene070500.t1 MTR_5g081720 32.566 304 195 6 39 339 53 349 9.33e-44 158
MS.gene070500.t1 MTR_5g015720 46.610 118 55 3 356 471 305 416 4.30e-27 113
MS.gene070500.t1 MTR_3g082080 52.941 85 39 1 380 464 157 240 2.42e-24 102
MS.gene070500.t1 MTR_8g085390 56.471 85 36 1 379 463 29 112 2.54e-24 100
MS.gene070500.t1 MTR_8g089400 53.659 82 38 0 377 458 34 115 6.82e-24 98.2
MS.gene070500.t1 MTR_3g048280 48.485 99 49 2 375 473 107 203 8.20e-24 99.4
MS.gene070500.t1 MTR_8g089400 53.659 82 38 0 377 458 54 135 1.90e-23 97.4
MS.gene070500.t1 MTR_5g097420 51.807 83 40 0 380 462 30 112 1.00e-22 93.6
MS.gene070500.t1 MTR_1g084820 55.294 85 36 2 374 458 414 496 7.45e-21 95.9
MS.gene070500.t1 MTR_1g084820 55.294 85 36 2 374 458 414 496 9.09e-21 95.9
MS.gene070500.t1 MTR_7g111600 39.568 139 76 2 332 463 105 242 2.47e-20 90.9
MS.gene070500.t1 MTR_5g091650 47.619 84 43 1 375 458 103 185 3.27e-20 89.0
MS.gene070500.t1 MTR_7g111600 39.568 139 76 2 332 463 105 242 3.30e-20 91.7
MS.gene070500.t1 MTR_7g111600 39.568 139 76 2 332 463 105 242 3.50e-20 91.3
MS.gene070500.t1 MTR_5g091650 47.619 84 43 1 375 458 103 185 7.76e-20 89.7
MS.gene070500.t1 MTR_8g085400 52.381 84 36 2 379 462 32 111 8.29e-20 85.1
MS.gene070500.t1 MTR_4g133730 46.341 82 44 0 380 461 28 109 1.18e-19 84.7
MS.gene070500.t1 MTR_4g133735 46.341 82 44 0 380 461 28 109 3.95e-19 83.2
MS.gene070500.t1 MTR_4g109490 53.165 79 35 2 380 458 24 100 5.48e-19 85.9
MS.gene070500.t1 MTR_4g079530 46.316 95 47 1 364 458 25 115 8.58e-19 82.8
MS.gene070500.t1 MTR_4g079530 46.316 95 47 1 364 458 25 115 1.34e-18 83.6
MS.gene070500.t1 MTR_2g049670 51.724 87 39 3 380 466 158 241 1.54e-18 87.0
MS.gene070500.t1 MTR_8g085440 46.250 80 42 1 379 458 31 109 5.19e-18 80.1
MS.gene070500.t1 MTR_4g036775 35.507 138 84 2 203 340 43 175 6.05e-18 83.2
MS.gene070500.t1 MTR_4g036775 38.372 86 49 1 6 87 1 86 8.37e-12 65.1
MS.gene070500.t1 MTR_1g116870 46.835 79 41 1 380 458 276 353 6.95e-18 85.5
MS.gene070500.t1 MTR_4g036680 40.385 104 57 2 237 340 77 175 2.78e-17 81.3
MS.gene070500.t1 MTR_4g036680 43.056 72 41 0 16 87 15 86 3.57e-11 63.2
MS.gene070500.t1 MTR_8g085420 45.000 80 43 1 379 458 31 109 2.81e-17 79.0
MS.gene070500.t1 MTR_8g088120 54.286 70 31 1 389 458 57 125 4.62e-17 80.5
MS.gene070500.t1 MTR_4g083070 41.758 91 49 2 374 461 12 101 1.38e-14 72.8
MS.gene070500.t1 MTR_5g044530 45.946 74 39 1 375 448 17 89 1.90e-14 73.6
MS.gene070500.t1 MTR_2g072500 38.750 80 47 1 379 458 7 84 2.42e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070500.t1 AT2G05790 71.332 443 121 2 19 457 21 461 0.0 661
MS.gene070500.t1 AT4G26830 62.749 451 151 4 9 457 9 444 0.0 563
MS.gene070500.t1 AT4G26830 63.636 440 145 3 18 457 24 448 0.0 561
MS.gene070500.t1 AT5G55180 62.132 441 155 2 19 459 23 451 0.0 560
MS.gene070500.t1 AT5G55180 61.959 439 155 2 19 457 23 449 0.0 556
MS.gene070500.t1 AT5G56590 40.899 445 245 4 21 463 24 452 6.75e-118 355
MS.gene070500.t1 AT2G01630 41.230 439 232 3 23 458 23 438 1.51e-117 352
MS.gene070500.t1 AT2G01630 40.766 444 237 3 23 463 23 443 3.80e-117 353
MS.gene070500.t1 AT1G11820 40.682 440 235 6 23 459 44 460 5.41e-117 352
MS.gene070500.t1 AT1G11820 40.541 444 238 6 23 463 44 464 2.10e-116 352
MS.gene070500.t1 AT4G29360 40.211 475 258 4 2 458 3 469 2.65e-116 352
MS.gene070500.t1 AT1G66250 40.492 447 238 5 23 466 32 453 1.55e-114 347
MS.gene070500.t1 AT4G29360 40.969 454 245 3 20 458 34 479 1.93e-114 348
MS.gene070500.t1 AT2G16230 39.593 442 248 4 23 463 25 448 4.21e-112 340
MS.gene070500.t1 AT3G07320 40.766 444 242 7 20 458 22 449 1.35e-110 335
MS.gene070500.t1 AT5G24318 38.562 459 261 7 3 458 9 449 3.93e-110 333
MS.gene070500.t1 AT5G24318 38.562 459 261 7 3 458 9 449 6.69e-110 333
MS.gene070500.t1 AT3G23770 39.159 452 252 6 13 457 29 464 1.49e-109 333
MS.gene070500.t1 AT4G34480 40.217 460 250 7 7 463 9 446 5.99e-108 330
MS.gene070500.t1 AT4G14080 38.688 442 253 5 20 457 39 466 2.07e-107 327
MS.gene070500.t1 AT3G13560 37.194 449 255 5 13 458 16 440 1.95e-103 318
MS.gene070500.t1 AT3G13560 37.194 449 255 5 13 458 16 440 1.95e-103 318
MS.gene070500.t1 AT3G13560 37.194 449 255 5 13 458 16 440 1.95e-103 318
MS.gene070500.t1 AT3G13560 37.194 449 255 5 13 458 16 440 1.95e-103 318
MS.gene070500.t1 AT3G13560 37.194 449 255 5 13 458 16 440 1.95e-103 318
MS.gene070500.t1 AT1G30080 49.555 337 166 4 6 340 18 352 1.17e-102 312
MS.gene070500.t1 AT1G30080 49.555 337 166 4 6 340 18 352 2.02e-102 312
MS.gene070500.t1 AT3G55430 39.301 458 237 15 10 458 18 443 2.02e-98 303
MS.gene070500.t1 AT4G18340 46.628 341 178 4 1 340 13 350 3.34e-98 300
MS.gene070500.t1 AT4G18340 46.628 341 178 4 1 340 13 350 6.48e-98 300
MS.gene070500.t1 AT2G01630 40.769 390 205 3 23 409 23 389 1.46e-96 296
MS.gene070500.t1 AT2G27500 47.335 319 166 2 23 340 29 346 4.42e-96 295
MS.gene070500.t1 AT2G27500 47.335 319 166 2 23 340 29 346 1.23e-95 294
MS.gene070500.t1 AT5G42100 48.916 323 159 5 22 340 26 346 2.09e-94 292
MS.gene070500.t1 AT1G32860 45.342 322 171 4 22 340 28 347 2.12e-94 292
MS.gene070500.t1 AT3G15800 46.364 330 174 3 16 343 36 364 3.03e-94 291
MS.gene070500.t1 AT5G42100 48.916 323 159 5 22 340 26 346 3.71e-94 291
MS.gene070500.t1 AT2G26600 44.548 321 176 2 21 340 32 351 6.59e-88 274
MS.gene070500.t1 AT5G42720 42.775 346 189 5 5 343 4 347 2.32e-87 275
MS.gene070500.t1 AT5G24318 41.056 341 193 5 3 340 9 344 6.49e-86 268
MS.gene070500.t1 AT1G11820 40.439 319 186 3 23 338 44 361 2.08e-84 265
MS.gene070500.t1 AT4G34480 42.773 339 189 4 7 342 9 345 4.87e-84 263
MS.gene070500.t1 AT4G34480 42.535 355 180 6 111 463 3 335 1.79e-83 263
MS.gene070500.t1 AT5G24318 39.755 327 180 3 132 458 1 310 2.83e-83 260
MS.gene070500.t1 AT2G39640 35.463 454 258 14 10 461 19 439 1.45e-81 263
MS.gene070500.t1 AT2G39640 35.870 92 57 2 372 463 453 542 3.04e-13 72.4
MS.gene070500.t1 AT2G27500 45.896 268 143 2 74 340 2 268 7.15e-75 238
MS.gene070500.t1 AT4G16260 39.017 346 200 8 4 349 5 339 1.03e-74 239
MS.gene070500.t1 AT3G46570 42.604 338 181 10 9 340 12 342 5.13e-73 234
MS.gene070500.t1 AT3G57270 40.062 322 184 6 20 340 24 337 6.06e-72 231
MS.gene070500.t1 AT5G20390 41.176 323 179 8 20 340 30 343 3.57e-71 229
MS.gene070500.t1 AT4G16260 40.000 320 181 8 30 349 2 310 3.15e-70 226
MS.gene070500.t1 AT3G61810 38.390 323 186 4 23 340 55 369 5.23e-68 222
MS.gene070500.t1 AT3G24330 32.770 473 276 17 2 460 16 460 9.62e-68 225
MS.gene070500.t1 AT3G57260 39.169 337 191 8 4 340 14 336 2.55e-66 217
MS.gene070500.t1 AT3G57260 39.403 335 189 8 6 340 32 352 4.02e-66 217
MS.gene070500.t1 AT2G26600 43.028 251 141 2 91 340 8 257 2.07e-65 213
MS.gene070500.t1 AT1G77780 38.123 341 197 9 4 340 2 332 2.11e-64 213
MS.gene070500.t1 AT5G20340 40.841 333 177 10 15 340 34 353 6.69e-64 211
MS.gene070500.t1 AT4G17180 34.529 446 246 16 23 458 25 434 3.92e-63 213
MS.gene070500.t1 AT5G20330 40.606 330 177 9 17 340 28 344 8.76e-63 207
MS.gene070500.t1 AT5G18220 31.277 470 273 17 9 460 14 451 1.55e-60 206
MS.gene070500.t1 AT1G64760 32.898 459 246 18 23 459 25 443 2.16e-60 205
MS.gene070500.t1 AT1G64760 32.898 459 246 18 23 459 25 443 2.16e-60 205
MS.gene070500.t1 AT3G57240 37.771 323 187 8 18 340 30 338 3.36e-60 201
MS.gene070500.t1 AT1G77790 38.272 324 189 8 20 340 26 341 1.24e-58 197
MS.gene070500.t1 AT1G33220 38.507 335 178 9 6 325 8 329 1.98e-58 196
MS.gene070500.t1 AT4G31140 31.924 473 273 19 4 461 7 445 1.14e-56 196
MS.gene070500.t1 AT2G19440 31.929 451 261 18 23 459 21 439 9.11e-56 193
MS.gene070500.t1 AT2G19440 31.929 451 261 18 23 459 21 439 9.11e-56 193
MS.gene070500.t1 AT3G04010 30.064 469 279 18 8 459 16 452 6.05e-55 191
MS.gene070500.t1 AT5G58480 32.135 445 263 13 23 459 26 439 2.77e-53 186
MS.gene070500.t1 AT5G64790 30.193 467 283 19 10 463 14 450 1.05e-51 182
MS.gene070500.t1 AT5G58090 31.360 456 261 17 20 458 19 439 1.17e-51 182
MS.gene070500.t1 AT5G20870 30.977 481 279 20 2 461 8 456 1.14e-48 174
MS.gene070500.t1 AT5G20560 32.075 318 207 7 16 332 27 336 6.79e-46 163
MS.gene070500.t1 AT3G55780 31.169 308 203 6 36 339 48 350 1.64e-45 163
MS.gene070500.t1 AT5G67460 28.877 374 194 12 91 459 66 372 6.78e-33 129
MS.gene070500.t1 AT5G67460 28.460 383 196 13 91 468 66 375 1.06e-32 128
MS.gene070500.t1 AT4G05430 48.387 93 48 0 367 459 35 127 7.64e-25 99.8
MS.gene070500.t1 AT5G35740 54.217 83 37 1 380 461 30 112 2.73e-24 97.8
MS.gene070500.t1 AT1G79480 58.228 79 32 1 380 458 311 388 3.08e-23 101
MS.gene070500.t1 AT1G79480 58.228 79 32 1 380 458 310 387 3.26e-23 101
MS.gene070500.t1 AT4G05430 51.220 82 40 0 377 458 20 101 4.28e-23 95.5
MS.gene070500.t1 AT4G05430 51.220 82 40 0 377 458 45 126 6.87e-23 95.5
MS.gene070500.t1 AT1G29380 56.098 82 35 1 380 461 148 228 9.89e-23 97.1
MS.gene070500.t1 AT1G29380 56.098 82 35 1 380 461 148 228 9.89e-23 97.1
MS.gene070500.t1 AT1G66870 48.864 88 45 0 376 463 22 109 1.42e-22 92.8
MS.gene070500.t1 AT2G30933 56.250 80 34 1 379 458 81 159 1.64e-22 94.4
MS.gene070500.t1 AT2G30933 56.250 80 34 1 379 458 81 159 1.64e-22 94.4
MS.gene070500.t1 AT1G66870 48.864 88 45 0 376 463 49 136 1.68e-22 93.6
MS.gene070500.t1 AT1G29380 55.422 83 36 1 380 462 148 229 2.45e-22 97.8
MS.gene070500.t1 AT1G29380 55.422 83 36 1 380 462 148 229 2.88e-22 96.7
MS.gene070500.t1 AT4G13600 55.952 84 36 1 380 463 61 143 3.38e-22 95.5
MS.gene070500.t1 AT2G30933 55.556 81 35 1 378 458 80 159 5.25e-22 94.7
MS.gene070500.t1 AT2G04910 48.889 90 45 1 371 460 7 95 1.00e-21 90.9
MS.gene070500.t1 AT5G63225 46.154 91 48 1 376 466 21 110 2.53e-21 89.4
MS.gene070500.t1 AT2G04910 47.826 92 47 1 371 462 7 97 6.93e-21 87.8
MS.gene070500.t1 AT1G09460 50.000 92 43 2 372 463 129 217 5.43e-19 88.2
MS.gene070500.t1 AT4G09462 43.182 88 49 1 371 458 20 106 6.59e-19 82.8
MS.gene070500.t1 AT4G09465 44.578 83 45 1 376 458 27 108 2.00e-18 81.3
MS.gene070500.t1 AT4G09467 44.578 83 45 1 376 458 27 108 2.34e-18 81.3
MS.gene070500.t1 AT4G09464 44.578 83 45 1 376 458 27 108 2.34e-18 81.3
MS.gene070500.t1 AT1G66852 46.988 83 43 1 376 458 22 103 2.49e-18 80.9
MS.gene070500.t1 AT5G53600 41.667 84 47 1 375 458 24 105 2.67e-18 80.9
MS.gene070500.t1 AT1G66855 42.683 82 47 0 377 458 23 104 3.41e-18 80.5
MS.gene070500.t1 AT4G16165 42.169 83 48 0 376 458 22 104 4.35e-18 80.1
MS.gene070500.t1 AT4G09466 44.578 83 45 1 376 458 27 108 5.13e-18 80.1
MS.gene070500.t1 AT5G53610 44.578 83 44 1 376 458 24 104 1.40e-17 79.0
MS.gene070500.t1 AT1G18650 43.373 83 46 1 376 458 17 98 1.52e-17 79.3
MS.gene070500.t1 AT1G18650 44.444 81 44 1 378 458 19 98 1.68e-17 80.9
MS.gene070500.t1 AT5G63230 39.560 91 54 1 376 466 22 111 2.90e-17 77.8
MS.gene070500.t1 AT5G63250 43.333 90 49 2 380 467 42 131 9.31e-17 77.0
MS.gene070500.t1 AT3G58100 42.500 80 46 0 380 459 41 120 2.61e-16 77.4
MS.gene070500.t1 AT2G29735 40.698 86 48 2 380 463 31 115 3.06e-16 75.1
MS.gene070500.t1 AT3G58100 42.500 80 46 0 380 459 117 196 5.44e-16 78.2
MS.gene070500.t1 AT5G61130 42.500 80 45 1 379 458 20 98 6.83e-16 76.6
MS.gene070500.t1 AT4G09090 46.053 76 39 2 380 454 31 105 1.21e-15 73.6
MS.gene070500.t1 AT2G43670 36.364 88 54 1 376 463 31 116 1.02e-14 70.9
MS.gene070500.t1 AT1G26450 50.000 66 32 1 387 452 27 91 2.36e-14 72.0
MS.gene070500.t1 AT5G63240 38.889 90 53 1 380 467 40 129 2.92e-14 70.1
MS.gene070500.t1 AT5G08000 42.353 85 48 1 374 458 34 117 6.80e-14 71.2
MS.gene070500.t1 AT1G78520 38.750 80 47 1 379 458 31 108 2.19e-13 67.0
MS.gene070500.t1 AT1G69295 48.571 70 35 1 392 461 32 100 2.48e-13 69.7
MS.gene070500.t1 AT1G13830 40.244 82 48 1 377 458 32 112 2.92e-13 69.3
MS.gene070500.t1 AT5G08000 42.169 83 47 1 376 458 17 98 3.80e-13 68.6
MS.gene070500.t1 AT1G69295 48.571 70 35 1 392 461 28 96 3.98e-13 68.9
MS.gene070500.t1 AT1G13830 40.506 79 46 1 380 458 21 98 5.50e-13 68.2
MS.gene070500.t1 AT2G42930 38.372 86 51 2 380 465 40 123 8.90e-13 65.9
MS.gene070500.t1 AT2G03505 36.250 80 50 1 379 458 20 98 1.45e-11 62.0
MS.gene070500.t1 AT2G03505 36.250 80 50 1 379 458 20 98 1.83e-11 63.2
MS.gene070500.t1 AT2G03505 36.250 80 50 1 379 458 20 98 1.83e-11 63.2
MS.gene070500.t1 AT2G03505 36.250 80 50 1 379 458 20 98 1.83e-11 63.2

Find 99 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCGACAGTGAGTTTGATTT+TGG 0.204771 5.4:+67751976 None:intergenic
CCCATTGCTCTTTCTGCTCT+TGG 0.246418 5.4:-67751722 MS.gene070500:CDS
TCACCTGCTTCACCGGTTTC+CGG 0.260147 5.4:-67751116 MS.gene070500:CDS
GCTGGTGGAAGTTGCTATTT+TGG 0.265592 5.4:-67750861 MS.gene070500:CDS
TTCAAAGCCTCCACGGTTAA+AGG 0.265647 5.4:+67751158 None:intergenic
GCATGTGCAACCAATGTATT+AGG 0.306046 5.4:+67750924 None:intergenic
TTCAGTTCTCCGTGCATTAT+CGG 0.309867 5.4:-67752002 MS.gene070500:CDS
TTGTAAACTTTCTTCTCATC+AGG 0.316572 5.4:+67751185 None:intergenic
AACGTCGTCGTTTCGGAAAC+GGG 0.333129 5.4:-67751413 MS.gene070500:CDS
TTTGTTAGATTCTTGTAATA+AGG 0.344241 5.4:-67750772 MS.gene070500:CDS
AGGTATTTCGTCGAGTTGTT+TGG 0.344374 5.4:+67751818 None:intergenic
TGATATAAACGTCGTCGTTT+CGG 0.347375 5.4:-67751420 MS.gene070500:CDS
TTGCTGCTGCAAAGAGTTGT+TGG 0.357391 5.4:+67751945 None:intergenic
AACAGCAATGGCTTCTATAA+TGG 0.358498 5.4:+67751862 None:intergenic
TGCAACACACCACGTGTTCC+CGG 0.361513 5.4:+67751052 None:intergenic
CGTAAGATCTTGACATCAAA+AGG 0.380025 5.4:-67751314 MS.gene070500:CDS
AAACGTCGTCGTTTCGGAAA+CGG 0.380698 5.4:-67751414 MS.gene070500:CDS
AACTCTTACCCTTCTTCATC+CGG 0.384099 5.4:-67751698 MS.gene070500:CDS
GTCAGGTGGATGCGGGTAAC+GGG 0.390822 5.4:-67751514 MS.gene070500:CDS
CCTACTTCAGAAAGAAACTT+TGG 0.391839 5.4:-67751218 MS.gene070500:CDS
GGTCAGGTGGATGCGGGTAA+CGG 0.397851 5.4:-67751515 MS.gene070500:CDS
CCAAAGTTTCTTTCTGAAGT+AGG 0.404695 5.4:+67751218 None:intergenic
CGTCGATTTGTGCGTCGAAA+AGG 0.406146 5.4:+67751477 None:intergenic
CTACTTCAGAAAGAAACTTT+GGG 0.413072 5.4:-67751217 MS.gene070500:CDS
TCAGTTCTCCGTGCATTATC+GGG 0.417009 5.4:-67752001 MS.gene070500:CDS
AAAACGGTGAGTTCTGCTTT+GGG 0.454292 5.4:+67751278 None:intergenic
ACCACCACTACCACCGCCAC+CGG 0.454349 5.4:+67751097 None:intergenic
GTTTCCGGTGGCGGTGGTAG+TGG 0.455031 5.4:-67751101 MS.gene070500:CDS
CTACCACCGCCACCGGAAAC+CGG 0.455497 5.4:+67751104 None:intergenic
AGTTCTGCTTTGGGCCTAAG+TGG 0.458606 5.4:+67751287 None:intergenic
GCTTCACCGGTTTCCGGTGG+CGG 0.458847 5.4:-67751110 MS.gene070500:CDS
TAATCTTCATAATGATATCA+AGG 0.459345 5.4:-67751753 MS.gene070500:CDS
GTTCTGCTTTGGGCCTAAGT+GGG 0.459877 5.4:+67751288 None:intergenic
AACTAAGCTACAAGCTGCAT+TGG 0.472806 5.4:-67751012 MS.gene070500:CDS
CTCACTAATGCTGGCAACAT+AGG 0.474414 5.4:-67752130 MS.gene070500:CDS
GTTAACCATGAGATAAGATC+TGG 0.477910 5.4:+67751613 None:intergenic
CTTCTATAATGGTGTTCGGT+TGG 0.480558 5.4:+67751873 None:intergenic
ATTATAGAAGCCATTGCTGT+TGG 0.480731 5.4:-67751860 MS.gene070500:CDS
TTTAATGAAAATCAAAAGCC+CGG 0.481671 5.4:-67751242 MS.gene070500:CDS
TGCTGCAAAGAGTTGTTGGT+TGG 0.483787 5.4:+67751949 None:intergenic
TTCATTGCTCTCACTAATGC+TGG 0.484424 5.4:-67752139 MS.gene070500:CDS
CCACCGGAAACCGGTGAAGC+AGG 0.489913 5.4:+67751113 None:intergenic
GTTTCTTTCTGAAGTAGGCC+CGG 0.494834 5.4:+67751223 None:intergenic
ATGGCTTCTATAATGGTGTT+CGG 0.494847 5.4:+67751869 None:intergenic
GGTGGCGGTGGTAGTGGTGG+TGG 0.495941 5.4:-67751095 MS.gene070500:CDS
GTGATTATAGAATGCTTACT+AGG 0.497222 5.4:+67750810 None:intergenic
CGGAATGAACCGGATGAAGA+AGG 0.497761 5.4:+67751689 None:intergenic
TCACCGGTTTCCGGTGGCGG+TGG 0.502690 5.4:-67751107 MS.gene070500:CDS
GGCGGTGGTAGTGGTGGTGG+TGG 0.506515 5.4:-67751092 MS.gene070500:CDS
CCAAGAGCAGAAAGAGCAAT+GGG 0.510634 5.4:+67751722 None:intergenic
AGCATTAGTGAGAGCAATGA+AGG 0.513108 5.4:+67752141 None:intergenic
CAATAGTTATTATCAGAAGC+AGG 0.514935 5.4:-67750889 MS.gene070500:CDS
TCCGGTGGCGGTGGTAGTGG+TGG 0.519947 5.4:-67751098 MS.gene070500:CDS
TATCAGAAGCAGGCACGTGC+TGG 0.522733 5.4:-67750879 MS.gene070500:CDS
CAACTCGGGTCGGAATGAAC+CGG 0.525919 5.4:+67751679 None:intergenic
AAACCGGTGAAGCAGGTGAC+GGG 0.526912 5.4:+67751120 None:intergenic
AACTTCATTTCCAACAGCAA+TGG 0.527788 5.4:+67751850 None:intergenic
TGACCCGTCACCTGCTTCAC+CGG 0.530441 5.4:-67751123 MS.gene070500:CDS
GCTGCAAAGAGTTGTTGGTT+GGG 0.533883 5.4:+67751950 None:intergenic
TTTCTTTCTGAAGTAGGCCC+GGG 0.544508 5.4:+67751224 None:intergenic
CAGAAGCAGGCACGTGCTGG+TGG 0.548369 5.4:-67750876 MS.gene070500:CDS
AATCCGGGTCAGGTGGATGC+GGG 0.549571 5.4:-67751521 MS.gene070500:CDS
TCACGAAGAAAATCAAGCAT+GGG 0.551379 5.4:+67751638 None:intergenic
TTCACGAAGAAAATCAAGCA+TGG 0.551918 5.4:+67751637 None:intergenic
GATAATGCACGGAGAACTGA+AGG 0.555190 5.4:+67752004 None:intergenic
GAATCCGGGTCAGGTGGATG+CGG 0.555237 5.4:-67751522 MS.gene070500:CDS
TTCTGCTTTGGGCCTAAGTG+GGG 0.556247 5.4:+67751289 None:intergenic
CATCAAAAGGGACCCCACTT+AGG 0.562771 5.4:-67751301 MS.gene070500:CDS
ACCAAGAGCAGAAAGAGCAA+TGG 0.563188 5.4:+67751721 None:intergenic
TTACAATGTTCCTTTAACCG+TGG 0.565146 5.4:-67751168 MS.gene070500:CDS
AATGAAGGTGAGGAAGATGA+AGG 0.565731 5.4:+67752156 None:intergenic
TGTAAACTTTCTTCTCATCA+GGG 0.566166 5.4:+67751186 None:intergenic
TCATTACCATCACCTTTCGA+AGG 0.568639 5.4:+67751386 None:intergenic
GGTGTTTCGAAGAGTACCAC+CGG 0.573726 5.4:-67751071 MS.gene070500:CDS
TCGTGAGAATCCGGGTCAGG+TGG 0.575087 5.4:-67751528 MS.gene070500:CDS
GAAACGGGTTGGCCTTCGAA+AGG 0.578195 5.4:-67751398 MS.gene070500:CDS
AAAACGGGTTGTATCAACTC+GGG 0.583703 5.4:+67751665 None:intergenic
CAATGTTCCTTTAACCGTGG+AGG 0.594166 5.4:-67751165 MS.gene070500:CDS
AAGCAGGTGACGGGTCATCA+TGG 0.594336 5.4:+67751129 None:intergenic
GGTTGGCCTTCGAAAGGTGA+TGG 0.601053 5.4:-67751392 MS.gene070500:CDS
TAGTGAGAGCAATGAAGGTG+AGG 0.601884 5.4:+67752146 None:intergenic
TTAATGAAAATCAAAAGCCC+GGG 0.602994 5.4:-67751241 MS.gene070500:CDS
TGAAACCAGATCTTATCTCA+TGG 0.606528 5.4:-67751618 MS.gene070500:CDS
TCGTCGTTTCGGAAACGGGT+TGG 0.611751 5.4:-67751409 MS.gene070500:CDS
CCTGCTTCACCGGTTTCCGG+TGG 0.614424 5.4:-67751113 MS.gene070500:CDS
GGAATGAACCGGATGAAGAA+GGG 0.615815 5.4:+67751690 None:intergenic
GAAACCGGTGAAGCAGGTGA+CGG 0.618354 5.4:+67751119 None:intergenic
GTAAGATCTTGACATCAAAA+GGG 0.619770 5.4:-67751313 MS.gene070500:CDS
CGGGTTGTATCAACTCGGGT+CGG 0.644559 5.4:+67751669 None:intergenic
TTACCCGCATCCACCTGACC+CGG 0.648918 5.4:+67751518 None:intergenic
GAAAGGTGATGGTAATGAAG+TGG 0.650157 5.4:-67751381 MS.gene070500:CDS
GGCAACATAGGCATAAACTA+CGG 0.652226 5.4:-67752118 MS.gene070500:CDS
AGAGTACCACCGGGAACACG+TGG 0.659760 5.4:-67751061 MS.gene070500:CDS
AAAGGTGATGGTAATGAAGT+GGG 0.661071 5.4:-67751380 MS.gene070500:CDS
GTTCAACTCCTAAAATCACA+AGG 0.702475 5.4:-67752058 MS.gene070500:CDS
GTGTTTCGAAGAGTACCACC+GGG 0.715327 5.4:-67751070 MS.gene070500:CDS
AACACACCACGTGTTCCCGG+TGG 0.717928 5.4:+67751055 None:intergenic
ATAATGCACGGAGAACTGAA+GGG 0.718645 5.4:+67752005 None:intergenic
TGTATTAGGATCAAAACACG+TGG 0.735386 5.4:+67750938 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACAAAAAACAATGAGAAA+AGG + chr5.4:67752160-67752179 None:intergenic 20.0%
!! TAATCTTCATAATGATATCA+AGG - chr5.4:67751192-67751211 MS.gene070500:CDS 20.0%
!! TTTGTTAGATTCTTGTAATA+AGG - chr5.4:67752173-67752192 MS.gene070500:CDS 20.0%
!!! AAAAAGTGCGAATAAAAAAA+CGG + chr5.4:67751686-67751705 None:intergenic 20.0%
! TTTAATGAAAATCAAAAGCC+CGG - chr5.4:67751703-67751722 MS.gene070500:CDS 25.0%
! TTTGACTCATAAGCAAAAAA+CGG + chr5.4:67751364-67751383 None:intergenic 25.0%
ATCAAGCATGGGTTTAAAAA+CGG + chr5.4:67751299-67751318 None:intergenic 30.0%
CAATAGTTATTATCAGAAGC+AGG - chr5.4:67752056-67752075 MS.gene070500:CDS 30.0%
CTACTTCAGAAAGAAACTTT+GGG - chr5.4:67751728-67751747 MS.gene070500:CDS 30.0%
GTAAGATCTTGACATCAAAA+GGG - chr5.4:67751632-67751651 MS.gene070500:CDS 30.0%
GTGATTATAGAATGCTTACT+AGG + chr5.4:67752138-67752157 None:intergenic 30.0%
TGTAAACTTTCTTCTCATCA+GGG + chr5.4:67751762-67751781 None:intergenic 30.0%
TTAATGAAAATCAAAAGCCC+GGG - chr5.4:67751704-67751723 MS.gene070500:CDS 30.0%
TTGACTCATAAGCAAAAAAC+GGG + chr5.4:67751363-67751382 None:intergenic 30.0%
TTGTAAACTTTCTTCTCATC+AGG + chr5.4:67751763-67751782 None:intergenic 30.0%
! CGATCTGTAAATGTTTTTCA+TGG + chr5.4:67751161-67751180 None:intergenic 30.0%
! CTTTTGATGTCAAGATCTTA+CGG + chr5.4:67751633-67751652 None:intergenic 30.0%
! TCTGTAAATGTTTTTCATGG+CGG + chr5.4:67751158-67751177 None:intergenic 30.0%
!!! AGCTTGTAGCTTAGTTTTAT+CGG + chr5.4:67751929-67751948 None:intergenic 30.0%
!!! GTGTTTTGATCCTAATACAT+TGG - chr5.4:67752011-67752030 MS.gene070500:CDS 30.0%
AACAGCAATGGCTTCTATAA+TGG + chr5.4:67751086-67751105 None:intergenic 35.0%
AACTTCATTTCCAACAGCAA+TGG + chr5.4:67751098-67751117 None:intergenic 35.0%
ATGGCTTCTATAATGGTGTT+CGG + chr5.4:67751079-67751098 None:intergenic 35.0%
ATTATAGAAGCCATTGCTGT+TGG - chr5.4:67751085-67751104 MS.gene070500:CDS 35.0%
CCTACTTCAGAAAGAAACTT+TGG - chr5.4:67751727-67751746 MS.gene070500:CDS 35.0%
CGTAAGATCTTGACATCAAA+AGG - chr5.4:67751631-67751650 MS.gene070500:CDS 35.0%
GTTAACCATGAGATAAGATC+TGG + chr5.4:67751335-67751354 None:intergenic 35.0%
GTTCAACTCCTAAAATCACA+AGG - chr5.4:67750887-67750906 MS.gene070500:CDS 35.0%
TCAAGCATGGGTTTAAAAAC+GGG + chr5.4:67751298-67751317 None:intergenic 35.0%
TCACGAAGAAAATCAAGCAT+GGG + chr5.4:67751310-67751329 None:intergenic 35.0%
TGAAACCAGATCTTATCTCA+TGG - chr5.4:67751327-67751346 MS.gene070500:CDS 35.0%
TGATATAAACGTCGTCGTTT+CGG - chr5.4:67751525-67751544 MS.gene070500:CDS 35.0%
TGTATTAGGATCAAAACACG+TGG + chr5.4:67752010-67752029 None:intergenic 35.0%
TTACAATGTTCCTTTAACCG+TGG - chr5.4:67751777-67751796 MS.gene070500:CDS 35.0%
TTCACGAAGAAAATCAAGCA+TGG + chr5.4:67751311-67751330 None:intergenic 35.0%
! AAAGGTGATGGTAATGAAGT+GGG - chr5.4:67751565-67751584 MS.gene070500:CDS 35.0%
! CTGTAAATGTTTTTCATGGC+GGG + chr5.4:67751157-67751176 None:intergenic 35.0%
! GGGTTATACCTTGTGATTTT+AGG + chr5.4:67750898-67750917 None:intergenic 35.0%
! TCAATCTTTTGCACTCTCAT+GGG - chr5.4:67751027-67751046 MS.gene070500:CDS 35.0%
!! AAAAACGGGTTGTATCAACT+CGG + chr5.4:67751284-67751303 None:intergenic 35.0%
!! ATCGACAGTGAGTTTGATTT+TGG + chr5.4:67750972-67750991 None:intergenic 35.0%
!! CCAAAGTTTCTTTCTGAAGT+AGG + chr5.4:67751730-67751749 None:intergenic 35.0%
!! GTAATTTTTCAAAGCCTCCA+CGG + chr5.4:67751797-67751816 None:intergenic 35.0%
!! TGAACTACTTTTGTTGCTGA+GGG + chr5.4:67750872-67750891 None:intergenic 35.0%
!! TGTGTCGTAGATTTTGACAT+GGG + chr5.4:67750918-67750937 None:intergenic 35.0%
!! TTGAACTACTTTTGTTGCTG+AGG + chr5.4:67750873-67750892 None:intergenic 35.0%
AAAAACGGTGAGTTCTGCTT+TGG + chr5.4:67751671-67751690 None:intergenic 40.0%
AAAACGGTGAGTTCTGCTTT+GGG + chr5.4:67751670-67751689 None:intergenic 40.0%
AACTAAGCTACAAGCTGCAT+TGG - chr5.4:67751933-67751952 MS.gene070500:CDS 40.0%
AACTCTTACCCTTCTTCATC+CGG - chr5.4:67751247-67751266 MS.gene070500:CDS 40.0%
AATGAAGGTGAGGAAGATGA+AGG + chr5.4:67750792-67750811 None:intergenic 40.0%
AGCATTAGTGAGAGCAATGA+AGG + chr5.4:67750807-67750826 None:intergenic 40.0%
ATAATGCACGGAGAACTGAA+GGG + chr5.4:67750943-67750962 None:intergenic 40.0%
CTTCTATAATGGTGTTCGGT+TGG + chr5.4:67751075-67751094 None:intergenic 40.0%
GCATGTGCAACCAATGTATT+AGG + chr5.4:67752024-67752043 None:intergenic 40.0%
GGCAACATAGGCATAAACTA+CGG - chr5.4:67750827-67750846 MS.gene070500:CDS 40.0%
TCATTACCATCACCTTTCGA+AGG + chr5.4:67751562-67751581 None:intergenic 40.0%
TTCAGTTCTCCGTGCATTAT+CGG - chr5.4:67750943-67750962 MS.gene070500:CDS 40.0%
TTCATTGCTCTCACTAATGC+TGG - chr5.4:67750806-67750825 MS.gene070500:CDS 40.0%
! AGGTATTTCGTCGAGTTGTT+TGG + chr5.4:67751130-67751149 None:intergenic 40.0%
! ATTGGATTTTGCTTGTGGTG+AGG - chr5.4:67751951-67751970 MS.gene070500:CDS 40.0%
! CTCAATCTTTTGCACTCTCA+TGG - chr5.4:67751026-67751045 MS.gene070500:CDS 40.0%
! GAAAGGTGATGGTAATGAAG+TGG - chr5.4:67751564-67751583 MS.gene070500:CDS 40.0%
! TTGGATTTTGCTTGTGGTGA+GGG - chr5.4:67751952-67751971 MS.gene070500:CDS 40.0%
!! AAAACGGGTTGTATCAACTC+GGG + chr5.4:67751283-67751302 None:intergenic 40.0%
!! CTGTGTCGTAGATTTTGACA+TGG + chr5.4:67750919-67750938 None:intergenic 40.0%
!! TGCTCTTTTTCGTGAGAATC+CGG - chr5.4:67751408-67751427 MS.gene070500:CDS 40.0%
!!! AGCTTAGTTTTATCGGCGTA+AGG + chr5.4:67751922-67751941 None:intergenic 40.0%
!!! CACGTGGCATTGTTTTGAAT+CGG + chr5.4:67751994-67752013 None:intergenic 40.0%
!!! TGGCATTGTTTTGAATCGGA+CGG + chr5.4:67751990-67752009 None:intergenic 40.0%
!!! TTTTGGAACCCGATAATGCA+CGG + chr5.4:67750955-67750974 None:intergenic 40.0%
AAACGTCGTCGTTTCGGAAA+CGG - chr5.4:67751531-67751550 MS.gene070500:CDS 45.0%
ACCAAGAGCAGAAAGAGCAA+TGG + chr5.4:67751227-67751246 None:intergenic 45.0%
CAATGTTCCTTTAACCGTGG+AGG - chr5.4:67751780-67751799 MS.gene070500:CDS 45.0%
CCAAGAGCAGAAAGAGCAAT+GGG + chr5.4:67751226-67751245 None:intergenic 45.0%
CTCACTAATGCTGGCAACAT+AGG - chr5.4:67750815-67750834 MS.gene070500:CDS 45.0%
GATAATGCACGGAGAACTGA+AGG + chr5.4:67750944-67750963 None:intergenic 45.0%
GGAATGAACCGGATGAAGAA+GGG + chr5.4:67751258-67751277 None:intergenic 45.0%
TAGTGAGAGCAATGAAGGTG+AGG + chr5.4:67750802-67750821 None:intergenic 45.0%
TCAGTTCTCCGTGCATTATC+GGG - chr5.4:67750944-67750963 MS.gene070500:CDS 45.0%
TGCTGCAAAGAGTTGTTGGT+TGG + chr5.4:67750999-67751018 None:intergenic 45.0%
TTCAAAGCCTCCACGGTTAA+AGG + chr5.4:67751790-67751809 None:intergenic 45.0%
TTGCTGCTGCAAAGAGTTGT+TGG + chr5.4:67751003-67751022 None:intergenic 45.0%
! GCTGCAAAGAGTTGTTGGTT+GGG + chr5.4:67750998-67751017 None:intergenic 45.0%
! GCTGCATTGGATTTTGCTTG+TGG - chr5.4:67751946-67751965 MS.gene070500:CDS 45.0%
!! CTACTTTTGTTGCTGAGGGT+AGG + chr5.4:67750868-67750887 None:intergenic 45.0%
!! GCTCTTTTTCGTGAGAATCC+GGG - chr5.4:67751409-67751428 MS.gene070500:CDS 45.0%
!! GTTTCTTTCTGAAGTAGGCC+CGG + chr5.4:67751725-67751744 None:intergenic 45.0%
!! TTTCTTTCTGAAGTAGGCCC+GGG + chr5.4:67751724-67751743 None:intergenic 45.0%
!!! GCTGGTGGAAGTTGCTATTT+TGG - chr5.4:67752084-67752103 MS.gene070500:CDS 45.0%
!!! GGTGGAAGTTGCTATTTTGG+TGG - chr5.4:67752087-67752106 MS.gene070500:CDS 45.0%
AACGTCGTCGTTTCGGAAAC+GGG - chr5.4:67751532-67751551 MS.gene070500:CDS 50.0%
CATCAAAAGGGACCCCACTT+AGG - chr5.4:67751644-67751663 MS.gene070500:CDS 50.0%
CCCATTGCTCTTTCTGCTCT+TGG - chr5.4:67751223-67751242 MS.gene070500:CDS 50.0%
CGGAATGAACCGGATGAAGA+AGG + chr5.4:67751259-67751278 None:intergenic 50.0%
! AGTTCTGCTTTGGGCCTAAG+TGG + chr5.4:67751661-67751680 None:intergenic 50.0%
! GATTTTGCTTGTGGTGAGGG+TGG - chr5.4:67751955-67751974 MS.gene070500:CDS 50.0%
! GTTCTGCTTTGGGCCTAAGT+GGG + chr5.4:67751660-67751679 None:intergenic 50.0%
! TTCTGCTTTGGGCCTAAGTG+GGG + chr5.4:67751659-67751678 None:intergenic 50.0%
! TTTTCGTGAGAATCCGGGTC+AGG - chr5.4:67751414-67751433 MS.gene070500:CDS 50.0%
!! CGTCGATTTGTGCGTCGAAA+AGG + chr5.4:67751471-67751490 None:intergenic 50.0%
!! GGTGTTTCGAAGAGTACCAC+CGG - chr5.4:67751874-67751893 MS.gene070500:CDS 50.0%
!! GTGTTTCGAAGAGTACCACC+GGG - chr5.4:67751875-67751894 MS.gene070500:CDS 50.0%
!! TTTTGGTGGTACGTCGTACG+TGG - chr5.4:67752101-67752120 MS.gene070500:CDS 50.0%
!!! TGTTTTTCATGGCGGGTACG+AGG + chr5.4:67751150-67751169 None:intergenic 50.0%
AAACCGGTGAAGCAGGTGAC+GGG + chr5.4:67751828-67751847 None:intergenic 55.0%
CAACTCGGGTCGGAATGAAC+CGG + chr5.4:67751269-67751288 None:intergenic 55.0%
CGGGTTGTATCAACTCGGGT+CGG + chr5.4:67751279-67751298 None:intergenic 55.0%
GAAACCGGTGAAGCAGGTGA+CGG + chr5.4:67751829-67751848 None:intergenic 55.0%
TATCAGAAGCAGGCACGTGC+TGG - chr5.4:67752066-67752085 MS.gene070500:CDS 55.0%
TCGTCGTTTCGGAAACGGGT+TGG - chr5.4:67751536-67751555 MS.gene070500:CDS 55.0%
TGCAACACACCACGTGTTCC+CGG + chr5.4:67751896-67751915 None:intergenic 55.0%
!! AAGCAGGTGACGGGTCATCA+TGG + chr5.4:67751819-67751838 None:intergenic 55.0%
!! GAAACGGGTTGGCCTTCGAA+AGG - chr5.4:67751547-67751566 MS.gene070500:CDS 55.0%
!! GGTTGGCCTTCGAAAGGTGA+TGG - chr5.4:67751553-67751572 MS.gene070500:CDS 55.0%
!! TCACCTGCTTCACCGGTTTC+CGG - chr5.4:67751829-67751848 MS.gene070500:CDS 55.0%
AACACACCACGTGTTCCCGG+TGG + chr5.4:67751893-67751912 None:intergenic 60.0%
AATCCGGGTCAGGTGGATGC+GGG - chr5.4:67751424-67751443 MS.gene070500:CDS 60.0%
GAATCCGGGTCAGGTGGATG+CGG - chr5.4:67751423-67751442 MS.gene070500:CDS 60.0%
GGTCAGGTGGATGCGGGTAA+CGG - chr5.4:67751430-67751449 MS.gene070500:CDS 60.0%
GTCAGGTGGATGCGGGTAAC+GGG - chr5.4:67751431-67751450 MS.gene070500:CDS 60.0%
TCGTGAGAATCCGGGTCAGG+TGG - chr5.4:67751417-67751436 MS.gene070500:CDS 60.0%
TGACCCGTCACCTGCTTCAC+CGG - chr5.4:67751822-67751841 MS.gene070500:CDS 60.0%
TTACCCGCATCCACCTGACC+CGG + chr5.4:67751430-67751449 None:intergenic 60.0%
! AGAGTACCACCGGGAACACG+TGG - chr5.4:67751884-67751903 MS.gene070500:CDS 60.0%
ACCACCACTACCACCGCCAC+CGG + chr5.4:67751851-67751870 None:intergenic 65.0%
CAGAAGCAGGCACGTGCTGG+TGG - chr5.4:67752069-67752088 MS.gene070500:CDS 65.0%
CCACCGGAAACCGGTGAAGC+AGG + chr5.4:67751835-67751854 None:intergenic 65.0%
CTACCACCGCCACCGGAAAC+CGG + chr5.4:67751844-67751863 None:intergenic 65.0%
! GTTTCCGGTGGCGGTGGTAG+TGG - chr5.4:67751844-67751863 MS.gene070500:CDS 65.0%
!! CCTGCTTCACCGGTTTCCGG+TGG - chr5.4:67751832-67751851 MS.gene070500:CDS 65.0%
!! GCTTCACCGGTTTCCGGTGG+CGG - chr5.4:67751835-67751854 MS.gene070500:CDS 65.0%
!! GGCGGTGGTAGTGGTGGTGG+TGG - chr5.4:67751853-67751872 MS.gene070500:CDS 70.0%
!! GGTGGCGGTGGTAGTGGTGG+TGG - chr5.4:67751850-67751869 MS.gene070500:CDS 70.0%
!! TCACCGGTTTCCGGTGGCGG+TGG - chr5.4:67751838-67751857 MS.gene070500:CDS 70.0%
!! TCCGGTGGCGGTGGTAGTGG+TGG - chr5.4:67751847-67751866 MS.gene070500:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 67750767 67752200 67750767 ID=MS.gene070500
chr5.4 mRNA 67750767 67752200 67750767 ID=MS.gene070500.t1;Parent=MS.gene070500
chr5.4 exon 67750767 67752200 67750767 ID=MS.gene070500.t1.exon1;Parent=MS.gene070500.t1
chr5.4 CDS 67750767 67752200 67750767 ID=cds.MS.gene070500.t1;Parent=MS.gene070500.t1
Gene Sequence

>MS.gene070500

ATGCATAACTTCACTCTCTTCACCTTCATCTTCCTCACCTTCATTGCTCTCACTAATGCTGGCAACATAGGCATAAACTACGGTCGTATAGCAAACAACCTACCCTCAGCAACAAAAGTAGTTCAACTCCTAAAATCACAAGGTATAACCCATGTCAAAATCTACGACACAGACCCTTCAGTTCTCCGTGCATTATCGGGTTCCAAAATCAAACTCACTGTCGATCTACCCAACCAACAACTCTTTGCAGCAGCAAAGTCTCAATCTTTTGCACTCTCATGGGTCGAAAGAAACATAGTTGCTTTCCAACCGAACACCATTATAGAAGCCATTGCTGTTGGAAATGAAGTTTTTGTTGATCCAAACAACTCGACGAAATACCTCGTACCCGCCATGAAAAACATTTACAGATCGCTACAAAAACATAATCTTCATAATGATATCAAGGTTTCTTCACCCATTGCTCTTTCTGCTCTTGGTAACTCTTACCCTTCTTCATCCGGTTCATTCCGACCCGAGTTGATACAACCCGTTTTTAAACCCATGCTTGATTTTCTTCGTGAAACCAGATCTTATCTCATGGTTAACGTTTACCCGTTTTTTGCTTATGAGTCAAACGCTGATGTTATCTCATTAGACTATGCTCTTTTTCGTGAGAATCCGGGTCAGGTGGATGCGGGTAACGGGTTGAGATACTTGAACCTTTTCGACGCACAAATCGACGCTGTTTTCGCTGCACTATCTCGTTTAAAATACGATGATATAAACGTCGTCGTTTCGGAAACGGGTTGGCCTTCGAAAGGTGATGGTAATGAAGTGGGTGCGAGTGTAGAGAATGCAGCTGCATACAACGCTAATCTCGTCCGTAAGATCTTGACATCAAAAGGGACCCCACTTAGGCCCAAAGCAGAACTCACCGTTTTTTTATTCGCACTTTTTAATGAAAATCAAAAGCCCGGGCCTACTTCAGAAAGAAACTTTGGGCTTTTTTACCCTGATGAGAAGAAAGTTTACAATGTTCCTTTAACCGTGGAGGCTTTGAAAAATTACCATGATGACCCGTCACCTGCTTCACCGGTTTCCGGTGGCGGTGGTAGTGGTGGTGGTGGTGTTTCGAAGAGTACCACCGGGAACACGTGGTGTGTTGCAAATCCTTACGCCGATAAAACTAAGCTACAAGCTGCATTGGATTTTGCTTGTGGTGAGGGTGGTGCTGATTGCCGTCCGATTCAAAACAATGCCACGTGTTTTGATCCTAATACATTGGTTGCACATGCTTCATTTGCGTTCAATAGTTATTATCAGAAGCAGGCACGTGCTGGTGGAAGTTGCTATTTTGGTGGTACGTCGTACGTGGTCACTCAAGAGCCTAGTAAGCATTCTATAATCACCTTTTCTCATTGTTTTTTGTTAGATTCTTGTAATAAGGCGTAA
Protein sequence

>MS.gene070500.t1

MHNFTLFTFIFLTFIALTNAGNIGINYGRIANNLPSATKVVQLLKSQGITHVKIYDTDPSVLRALSGSKIKLTVDLPNQQLFAAAKSQSFALSWVERNIVAFQPNTIIEAIAVGNEVFVDPNNSTKYLVPAMKNIYRSLQKHNLHNDIKVSSPIALSALGNSYPSSSGSFRPELIQPVFKPMLDFLRETRSYLMVNVYPFFAYESNADVISLDYALFRENPGQVDAGNGLRYLNLFDAQIDAVFAALSRLKYDDINVVVSETGWPSKGDGNEVGASVENAAAYNANLVRKILTSKGTPLRPKAELTVFLFALFNENQKPGPTSERNFGLFYPDEKKVYNVPLTVEALKNYHDDPSPASPVSGGGGSGGGGVSKSTTGNTWCVANPYADKTKLQAALDFACGEGGADCRPIQNNATCFDPNTLVAHASFAFNSYYQKQARAGGSCYFGGTSYVVTQEPSKHSIITFSHCFLLDSCNKA