Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070714.t1 | XP_027188200.1 | 48.1 | 287 | 134 | 3 | 18 | 303 | 26 | 298 | 2.00E-56 | 229.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070714.t1 | Q9FHE1 | 38.3 | 201 | 111 | 4 | 47 | 238 | 261 | 457 | 6.3e-27 | 122.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070714.t1 | A0A3Q7YDC8 | 48.1 | 287 | 134 | 3 | 18 | 303 | 26 | 298 | 1.4e-56 | 229.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029093 | MS.gene070714 | PPI |
| MS.gene90825 | MS.gene070714 | PPI |
| MS.gene97346 | MS.gene070714 | PPI |
| MS.gene066439 | MS.gene070714 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070714.t1 | MTR_7g088160 | 43.730 | 311 | 136 | 3 | 18 | 303 | 75 | 371 | 5.66e-78 | 243 |
| MS.gene070714.t1 | MTR_4g063670 | 43.564 | 303 | 140 | 9 | 15 | 303 | 17 | 302 | 1.93e-55 | 182 |
| MS.gene070714.t1 | MTR_0867s0010 | 43.564 | 303 | 140 | 8 | 15 | 303 | 17 | 302 | 1.46e-51 | 172 |
| MS.gene070714.t1 | MTR_4g083510 | 45.370 | 216 | 96 | 7 | 15 | 226 | 17 | 214 | 2.52e-46 | 159 |
| MS.gene070714.t1 | MTR_7g107340 | 35.986 | 289 | 137 | 4 | 16 | 303 | 76 | 317 | 2.83e-44 | 154 |
| MS.gene070714.t1 | MTR_1g051185 | 47.020 | 151 | 70 | 4 | 77 | 225 | 45 | 187 | 3.56e-35 | 128 |
| MS.gene070714.t1 | MTR_3g069460 | 41.566 | 166 | 86 | 3 | 15 | 178 | 17 | 173 | 9.81e-35 | 124 |
| MS.gene070714.t1 | MTR_7g114170 | 38.333 | 180 | 68 | 5 | 16 | 195 | 61 | 197 | 3.69e-26 | 105 |
| MS.gene070714.t1 | MTR_6g081150 | 36.413 | 184 | 71 | 5 | 77 | 260 | 40 | 177 | 3.69e-25 | 99.4 |
| MS.gene070714.t1 | MTR_5g066280 | 25.188 | 266 | 176 | 3 | 20 | 283 | 55 | 299 | 3.25e-21 | 92.4 |
| MS.gene070714.t1 | MTR_4g026120 | 26.066 | 211 | 135 | 2 | 20 | 230 | 55 | 244 | 3.62e-21 | 92.0 |
| MS.gene070714.t1 | MTR_4g036435 | 26.066 | 211 | 135 | 2 | 20 | 230 | 55 | 244 | 3.62e-21 | 92.0 |
| MS.gene070714.t1 | MTR_3g067785 | 26.066 | 211 | 135 | 2 | 20 | 230 | 55 | 244 | 3.77e-21 | 92.0 |
| MS.gene070714.t1 | MTR_4g013220 | 26.066 | 211 | 135 | 2 | 20 | 230 | 55 | 244 | 4.69e-21 | 92.0 |
| MS.gene070714.t1 | MTR_1g106885 | 26.066 | 211 | 135 | 2 | 20 | 230 | 116 | 305 | 3.16e-20 | 90.1 |
| MS.gene070714.t1 | MTR_2g022120 | 26.066 | 211 | 135 | 2 | 20 | 230 | 119 | 308 | 3.23e-20 | 90.1 |
| MS.gene070714.t1 | MTR_5g077245 | 25.592 | 211 | 136 | 2 | 20 | 230 | 108 | 297 | 2.26e-19 | 87.8 |
| MS.gene070714.t1 | MTR_2g072860 | 28.659 | 164 | 112 | 2 | 18 | 181 | 29 | 187 | 5.39e-19 | 85.9 |
| MS.gene070714.t1 | MTR_7g461350 | 29.448 | 163 | 110 | 2 | 18 | 180 | 97 | 254 | 1.03e-18 | 85.9 |
| MS.gene070714.t1 | MTR_6g016670 | 29.448 | 163 | 110 | 2 | 18 | 180 | 97 | 254 | 1.03e-18 | 85.9 |
| MS.gene070714.t1 | MTR_3g464310 | 29.448 | 163 | 110 | 2 | 18 | 180 | 97 | 254 | 1.03e-18 | 85.9 |
| MS.gene070714.t1 | MTR_6g092533 | 27.329 | 161 | 114 | 1 | 20 | 180 | 119 | 276 | 1.11e-18 | 85.9 |
| MS.gene070714.t1 | MTR_3g464170 | 28.834 | 163 | 111 | 2 | 18 | 180 | 97 | 254 | 1.75e-18 | 85.1 |
| MS.gene070714.t1 | MTR_1g100375 | 28.834 | 163 | 111 | 2 | 18 | 180 | 97 | 254 | 1.75e-18 | 85.1 |
| MS.gene070714.t1 | MTR_6g051405 | 28.834 | 163 | 111 | 2 | 18 | 180 | 97 | 254 | 1.82e-18 | 85.1 |
| MS.gene070714.t1 | MTR_3g450670 | 28.221 | 163 | 112 | 2 | 18 | 180 | 93 | 250 | 4.04e-18 | 84.0 |
| MS.gene070714.t1 | MTR_1g471070 | 28.221 | 163 | 112 | 2 | 18 | 180 | 93 | 250 | 4.04e-18 | 84.0 |
| MS.gene070714.t1 | MTR_7g062380 | 23.977 | 171 | 112 | 1 | 59 | 229 | 26 | 178 | 4.69e-15 | 73.9 |
| MS.gene070714.t1 | MTR_6g453050 | 24.542 | 273 | 170 | 8 | 20 | 283 | 55 | 300 | 1.22e-13 | 70.5 |
| MS.gene070714.t1 | MTR_4g046090 | 26.316 | 152 | 94 | 1 | 79 | 230 | 71 | 204 | 8.17e-13 | 67.4 |
| MS.gene070714.t1 | MTR_7g083520 | 26.016 | 123 | 91 | 0 | 59 | 181 | 65 | 187 | 9.59e-13 | 67.8 |
| MS.gene070714.t1 | MTR_1g086750 | 27.966 | 118 | 85 | 0 | 59 | 176 | 26 | 143 | 1.76e-12 | 65.9 |
| MS.gene070714.t1 | MTR_8g015740 | 42.857 | 77 | 32 | 1 | 25 | 89 | 54 | 130 | 2.33e-11 | 60.8 |
| MS.gene070714.t1 | MTR_2g023560 | 63.636 | 44 | 16 | 0 | 58 | 101 | 62 | 105 | 3.41e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070714.t1 | AT5G41220 | 38.889 | 198 | 108 | 4 | 50 | 238 | 206 | 399 | 9.13e-34 | 129 |
| MS.gene070714.t1 | AT5G41220 | 38.889 | 198 | 108 | 4 | 50 | 238 | 214 | 407 | 9.69e-34 | 129 |
| MS.gene070714.t1 | AT5G41220 | 38.889 | 198 | 108 | 4 | 50 | 238 | 264 | 457 | 1.29e-33 | 129 |
| MS.gene070714.t1 | AT5G41240 | 37.255 | 204 | 114 | 4 | 50 | 243 | 264 | 463 | 1.54e-32 | 126 |
| MS.gene070714.t1 | AT3G47680 | 32.558 | 215 | 117 | 8 | 22 | 227 | 14 | 209 | 1.14e-23 | 98.6 |
| MS.gene070714.t1 | AT1G66235 | 25.510 | 196 | 119 | 5 | 59 | 236 | 7 | 193 | 9.42e-13 | 67.8 |
Find 53 sgRNAs with CRISPR-Local
Find 64 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGGATTCTTCAGTAAAT+TGG | 0.187266 | 8.4:-1492942 | None:intergenic |
| GTAAATTGGCATGACCATTT+AGG | 0.268868 | 8.4:-1492928 | None:intergenic |
| TAGAAATATTTAACCATGAT+TGG | 0.280172 | 8.4:-1492609 | None:intergenic |
| ATCATGGTTAAATATTTCTA+AGG | 0.308295 | 8.4:+1492612 | MS.gene070714:CDS |
| TACTAAAAGATGAACCTAAA+TGG | 0.349471 | 8.4:+1492914 | MS.gene070714:CDS |
| TTCACTTGAGTTGTATTGTC+CGG | 0.371973 | 8.4:-1493037 | None:intergenic |
| AGAACAAAGAATTCTGCTTC+AGG | 0.392497 | 8.4:+1492967 | MS.gene070714:CDS |
| AGAATTCTTTGTTCTCTTGT+TGG | 0.394331 | 8.4:-1492959 | None:intergenic |
| GTTAGATCCACATGAACAAT+AGG | 0.411169 | 8.4:-1493129 | None:intergenic |
| TCACTTGAGTTGTATTGTCC+GGG | 0.435029 | 8.4:-1493036 | None:intergenic |
| TCACCACTTGTAGGCGTGTC+CGG | 0.441723 | 8.4:-1493012 | None:intergenic |
| AGTAGAGTGGTTCGTCCGAT+TGG | 0.444657 | 8.4:+1493060 | MS.gene070714:CDS |
| ATCTCTTGATGGATACATCT+AGG | 0.458045 | 8.4:+1493277 | MS.gene070714:CDS |
| ATACACTTCTTATCCAATCA+TGG | 0.460631 | 8.4:+1492596 | MS.gene070714:CDS |
| AGGAGAAAATATATAGAGAA+AGG | 0.462201 | 8.4:+1492557 | MS.gene070714:CDS |
| TGAGCTTCACTATCTCTTGA+TGG | 0.465437 | 8.4:+1493266 | MS.gene070714:CDS |
| TTTGAAGAAATCTGAGCTGT+TGG | 0.469253 | 8.4:-1492520 | None:intergenic |
| ATGGTCGAAGGTGAACTTGA+TGG | 0.477920 | 8.4:+1492750 | MS.gene070714:CDS |
| CTACACATCCTCTTCTAATC+CGG | 0.479246 | 8.4:+1492993 | MS.gene070714:CDS |
| TGTCCGGGGTCACCACTTGT+AGG | 0.492325 | 8.4:-1493021 | None:intergenic |
| ATTTCTAAGGATCCAATTGT+GGG | 0.492615 | 8.4:+1492625 | MS.gene070714:CDS |
| GTAGAGTGGTTCGTCCGATT+GGG | 0.497308 | 8.4:+1493061 | MS.gene070714:CDS |
| CAATATCGTGGTCATTTGAA+AGG | 0.504699 | 8.4:+1492700 | MS.gene070714:CDS |
| TTGTTCATGTGGATCTAACT+AGG | 0.507003 | 8.4:+1493133 | MS.gene070714:CDS |
| GACAAAAGCAGCTAAAAGAA+AGG | 0.508350 | 8.4:+1493083 | MS.gene070714:CDS |
| TATTTCTAAGGATCCAATTG+TGG | 0.512026 | 8.4:+1492624 | MS.gene070714:CDS |
| CCAACTTGAGAGGAAAATGA+TGG | 0.520919 | 8.4:-1492463 | None:intergenic |
| GCATGAAGGTAACAAGTTGA+AGG | 0.526954 | 8.4:+1493212 | MS.gene070714:CDS |
| CGACATTATGCAAGATGCAT+TGG | 0.532468 | 8.4:+1492837 | MS.gene070714:CDS |
| AATATCGTGGTCATTTGAAA+GGG | 0.541210 | 8.4:+1492701 | MS.gene070714:CDS |
| ACAAAAGCAGCTAAAAGAAA+GGG | 0.543467 | 8.4:+1493084 | MS.gene070714:CDS |
| GCCTATTCAAGAAAGAAAAG+TGG | 0.554764 | 8.4:+1492802 | MS.gene070714:CDS |
| AGTTGGGTTAGATAATATTG+AGG | 0.557841 | 8.4:+1492480 | MS.gene070714:CDS |
| TGAATCAAATTAAATGTCGA+TGG | 0.569722 | 8.4:+1492731 | MS.gene070714:CDS |
| TCATGTGGATCTAACTAGGA+TGG | 0.578161 | 8.4:+1493137 | MS.gene070714:CDS |
| TGAAACACCTATTGTTCATG+TGG | 0.578577 | 8.4:+1493122 | MS.gene070714:CDS |
| AATTAAATGTCGATGGTCGA+AGG | 0.587022 | 8.4:+1492738 | MS.gene070714:CDS |
| CGGATTAGAAGAGGATGTGT+AGG | 0.590924 | 8.4:-1492992 | None:intergenic |
| ATTATCTAACCCAACTTGAG+AGG | 0.596041 | 8.4:-1492473 | None:intergenic |
| TTCTAAGGATCCAATTGTGG+GGG | 0.599880 | 8.4:+1492627 | MS.gene070714:CDS |
| ACGCCTACAAGTGGTGACCC+CGG | 0.604163 | 8.4:+1493018 | MS.gene070714:CDS |
| CACTTGAGTTGTATTGTCCG+GGG | 0.607801 | 8.4:-1493035 | None:intergenic |
| ATTGCACGTGGTGTGCATGA+AGG | 0.607967 | 8.4:+1493198 | MS.gene070714:CDS |
| GATAATTATAATCAATATCG+TGG | 0.614936 | 8.4:+1492688 | MS.gene070714:CDS |
| AATCCGGACACGCCTACAAG+TGG | 0.635438 | 8.4:+1493009 | MS.gene070714:CDS |
| AGGCGTGTCCGGATTAGAAG+AGG | 0.638071 | 8.4:-1493001 | None:intergenic |
| TTTCTAAGGATCCAATTGTG+GGG | 0.639337 | 8.4:+1492626 | MS.gene070714:CDS |
| CAACTCAAGTGAAAGTAGAG+TGG | 0.640911 | 8.4:+1493047 | MS.gene070714:CDS |
| ATATAGAGAAAGGTTTACCA+CGG | 0.696539 | 8.4:+1492567 | MS.gene070714:CDS |
| GCTTTAGAAGATATTGCACG+TGG | 0.699659 | 8.4:+1493186 | MS.gene070714:CDS |
| GGATACATCTAGGATGACAG+AGG | 0.702928 | 8.4:+1493287 | MS.gene070714:CDS |
| AAGAAGTGTATCTTCCTCCG+TGG | 0.715732 | 8.4:-1492584 | None:intergenic |
| TAGAGAAAGGTTTACCACGG+AGG | 0.724762 | 8.4:+1492570 | MS.gene070714:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATTATAATCAATATCG+TGG | + | chr8.4:1492688-1492707 | MS.gene070714:CDS | 20.0% |
| !! | TAGAAATATTTAACCATGAT+TGG | - | chr8.4:1492612-1492631 | None:intergenic | 20.0% |
| !! | TTCAAAAGAAACAAAAACAA+AGG | + | chr8.4:1492537-1492556 | MS.gene070714:CDS | 20.0% |
| !!! | ATCATGGTTAAATATTTCTA+AGG | + | chr8.4:1492612-1492631 | MS.gene070714:CDS | 20.0% |
| ! | AGGAGAAAATATATAGAGAA+AGG | + | chr8.4:1492557-1492576 | MS.gene070714:CDS | 25.0% |
| ! | GGAAAAAGAATTGCAAATTA+AGG | + | chr8.4:1493233-1493252 | MS.gene070714:CDS | 25.0% |
| ! | TACTAAAAGATGAACCTAAA+TGG | + | chr8.4:1492914-1492933 | MS.gene070714:CDS | 25.0% |
| ! | TGAATCAAATTAAATGTCGA+TGG | + | chr8.4:1492731-1492750 | MS.gene070714:CDS | 25.0% |
| AATATCGTGGTCATTTGAAA+GGG | + | chr8.4:1492701-1492720 | MS.gene070714:CDS | 30.0% | |
| ACAAAAGCAGCTAAAAGAAA+GGG | + | chr8.4:1493084-1493103 | MS.gene070714:CDS | 30.0% | |
| AGAATTCTTTGTTCTCTTGT+TGG | - | chr8.4:1492962-1492981 | None:intergenic | 30.0% | |
| ATACACTTCTTATCCAATCA+TGG | + | chr8.4:1492596-1492615 | MS.gene070714:CDS | 30.0% | |
| ATATAGAGAAAGGTTTACCA+CGG | + | chr8.4:1492567-1492586 | MS.gene070714:CDS | 30.0% | |
| TGTTGGATTCTTCAGTAAAT+TGG | - | chr8.4:1492945-1492964 | None:intergenic | 30.0% | |
| ! | AGTTGGGTTAGATAATATTG+AGG | + | chr8.4:1492480-1492499 | MS.gene070714:CDS | 30.0% |
| ! | ATTTCTAAGGATCCAATTGT+GGG | + | chr8.4:1492625-1492644 | MS.gene070714:CDS | 30.0% |
| ! | TATTTCTAAGGATCCAATTG+TGG | + | chr8.4:1492624-1492643 | MS.gene070714:CDS | 30.0% |
| ! | TCTTTTAGTAATTTCCATGC+TGG | - | chr8.4:1492904-1492923 | None:intergenic | 30.0% |
| !! | ACCACTTTTCTTTCTTGAAT+AGG | - | chr8.4:1492806-1492825 | None:intergenic | 30.0% |
| AATTAAATGTCGATGGTCGA+AGG | + | chr8.4:1492738-1492757 | MS.gene070714:CDS | 35.0% | |
| AGAACAAAGAATTCTGCTTC+AGG | + | chr8.4:1492967-1492986 | MS.gene070714:CDS | 35.0% | |
| ATTATCTAACCCAACTTGAG+AGG | - | chr8.4:1492476-1492495 | None:intergenic | 35.0% | |
| CAATATCGTGGTCATTTGAA+AGG | + | chr8.4:1492700-1492719 | MS.gene070714:CDS | 35.0% | |
| GACAAAAGCAGCTAAAAGAA+AGG | + | chr8.4:1493083-1493102 | MS.gene070714:CDS | 35.0% | |
| GCCTATTCAAGAAAGAAAAG+TGG | + | chr8.4:1492802-1492821 | MS.gene070714:CDS | 35.0% | |
| GTAAATTGGCATGACCATTT+AGG | - | chr8.4:1492931-1492950 | None:intergenic | 35.0% | |
| GTTAGATCCACATGAACAAT+AGG | - | chr8.4:1493132-1493151 | None:intergenic | 35.0% | |
| TGAAACACCTATTGTTCATG+TGG | + | chr8.4:1493122-1493141 | MS.gene070714:CDS | 35.0% | |
| TTGTTCATGTGGATCTAACT+AGG | + | chr8.4:1493133-1493152 | MS.gene070714:CDS | 35.0% | |
| TTTGAAGAAATCTGAGCTGT+TGG | - | chr8.4:1492523-1492542 | None:intergenic | 35.0% | |
| ! | ACCAAAGAGCAAGTTCTTTT+TGG | + | chr8.4:1492653-1492672 | MS.gene070714:CDS | 35.0% |
| ! | ATCTCTTGATGGATACATCT+AGG | + | chr8.4:1493277-1493296 | MS.gene070714:CDS | 35.0% |
| ! | CATCATTTTCCTCTCAAGTT+GGG | + | chr8.4:1492464-1492483 | MS.gene070714:CDS | 35.0% |
| ! | TCCAAAAAGAACTTGCTCTT+TGG | - | chr8.4:1492657-1492676 | None:intergenic | 35.0% |
| ! | TTCACTTGAGTTGTATTGTC+CGG | - | chr8.4:1493040-1493059 | None:intergenic | 35.0% |
| ! | TTTCTAAGGATCCAATTGTG+GGG | + | chr8.4:1492626-1492645 | MS.gene070714:CDS | 35.0% |
| CAACTCAAGTGAAAGTAGAG+TGG | + | chr8.4:1493047-1493066 | MS.gene070714:CDS | 40.0% | |
| CCAACTTGAGAGGAAAATGA+TGG | - | chr8.4:1492466-1492485 | None:intergenic | 40.0% | |
| CGACATTATGCAAGATGCAT+TGG | + | chr8.4:1492837-1492856 | MS.gene070714:CDS | 40.0% | |
| CTACACATCCTCTTCTAATC+CGG | + | chr8.4:1492993-1493012 | MS.gene070714:CDS | 40.0% | |
| TCATGTGGATCTAACTAGGA+TGG | + | chr8.4:1493137-1493156 | MS.gene070714:CDS | 40.0% | |
| TGAGCTTCACTATCTCTTGA+TGG | + | chr8.4:1493266-1493285 | MS.gene070714:CDS | 40.0% | |
| ! | CCATCATTTTCCTCTCAAGT+TGG | + | chr8.4:1492463-1492482 | MS.gene070714:CDS | 40.0% |
| ! | GCATGAAGGTAACAAGTTGA+AGG | + | chr8.4:1493212-1493231 | MS.gene070714:CDS | 40.0% |
| ! | GTTTTATGTTAGTGCCAGCA+TGG | + | chr8.4:1492887-1492906 | MS.gene070714:CDS | 40.0% |
| ! | TCACTTGAGTTGTATTGTCC+GGG | - | chr8.4:1493039-1493058 | None:intergenic | 40.0% |
| ! | TTCTAAGGATCCAATTGTGG+GGG | + | chr8.4:1492627-1492646 | MS.gene070714:CDS | 40.0% |
| !! | GCTTTAGAAGATATTGCACG+TGG | + | chr8.4:1493186-1493205 | MS.gene070714:CDS | 40.0% |
| !!! | TTAGCTGCTTTTGTCCCAAT+CGG | - | chr8.4:1493078-1493097 | None:intergenic | 40.0% |
| ATGGTCGAAGGTGAACTTGA+TGG | + | chr8.4:1492750-1492769 | MS.gene070714:CDS | 45.0% | |
| TAGAGAAAGGTTTACCACGG+AGG | + | chr8.4:1492570-1492589 | MS.gene070714:CDS | 45.0% | |
| ! | AAGAAGTGTATCTTCCTCCG+TGG | - | chr8.4:1492587-1492606 | None:intergenic | 45.0% |
| ! | CACTTGAGTTGTATTGTCCG+GGG | - | chr8.4:1493038-1493057 | None:intergenic | 45.0% |
| ! | CGGATTAGAAGAGGATGTGT+AGG | - | chr8.4:1492995-1493014 | None:intergenic | 45.0% |
| ! | GGATACATCTAGGATGACAG+AGG | + | chr8.4:1493287-1493306 | MS.gene070714:CDS | 45.0% |
| AGTAGAGTGGTTCGTCCGAT+TGG | + | chr8.4:1493060-1493079 | MS.gene070714:CDS | 50.0% | |
| ATTGCACGTGGTGTGCATGA+AGG | + | chr8.4:1493198-1493217 | MS.gene070714:CDS | 50.0% | |
| GTAGAGTGGTTCGTCCGATT+GGG | + | chr8.4:1493061-1493080 | MS.gene070714:CDS | 50.0% | |
| !! | CTTTGGTTTGCCCCCACAAT+TGG | - | chr8.4:1492640-1492659 | None:intergenic | 50.0% |
| AATCCGGACACGCCTACAAG+TGG | + | chr8.4:1493009-1493028 | MS.gene070714:CDS | 55.0% | |
| TCACCACTTGTAGGCGTGTC+CGG | - | chr8.4:1493015-1493034 | None:intergenic | 55.0% | |
| ! | AGGCGTGTCCGGATTAGAAG+AGG | - | chr8.4:1493004-1493023 | None:intergenic | 55.0% |
| ACGCCTACAAGTGGTGACCC+CGG | + | chr8.4:1493018-1493037 | MS.gene070714:CDS | 60.0% | |
| TGTCCGGGGTCACCACTTGT+AGG | - | chr8.4:1493024-1493043 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 1492406 | 1493314 | 1492406 | ID=MS.gene070714 |
| chr8.4 | mRNA | 1492406 | 1493314 | 1492406 | ID=MS.gene070714.t1;Parent=MS.gene070714 |
| chr8.4 | exon | 1492406 | 1493314 | 1492406 | ID=MS.gene070714.t1.exon1;Parent=MS.gene070714.t1 |
| chr8.4 | CDS | 1492406 | 1493314 | 1492406 | ID=cds.MS.gene070714.t1;Parent=MS.gene070714.t1 |
| Gene Sequence |
| Protein sequence |
