Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070759.t1 | KEH30741.1 | 85.8 | 918 | 112 | 4 | 1 | 903 | 250 | 1164 | 0.00E+00 | 1416 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070759.t1 | O82500 | 34.4 | 517 | 310 | 8 | 5 | 502 | 161 | 667 | 5.3e-77 | 290.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070759.t1 | A0A072UMY5 | 85.8 | 918 | 112 | 4 | 1 | 903 | 250 | 1164 | 0.0e+00 | 1416.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052493 | MS.gene070759 | 0.821729 | 3.46E-53 | -1.69E-46 |
| MS.gene052686 | MS.gene070759 | 0.806526 | 7.88E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene070759 | 0.801212 | 1.00E-48 | -1.69E-46 |
| MS.gene054291 | MS.gene070759 | -0.823384 | 1.43E-53 | -1.69E-46 |
| MS.gene055864 | MS.gene070759 | 0.815554 | 8.71E-52 | -1.69E-46 |
| MS.gene056174 | MS.gene070759 | 0.805412 | 1.35E-49 | -1.69E-46 |
| MS.gene056779 | MS.gene070759 | 0.812812 | 3.51E-51 | -1.69E-46 |
| MS.gene058081 | MS.gene070759 | 0.802653 | 5.06E-49 | -1.69E-46 |
| MS.gene060373 | MS.gene070759 | 0.800243 | 1.58E-48 | -1.69E-46 |
| MS.gene060435 | MS.gene070759 | 0.818769 | 1.65E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene070759 | 0.816477 | 5.42E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene070759 | 0.808195 | 3.49E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 170 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTTAGAAATCCTAAATT+TGG | 0.079791 | 4.2:+29041883 | MS.gene070759:CDS |
| CACAGCCTGTTCCACTTTCT+TGG | 0.102332 | 4.2:-29040746 | None:intergenic |
| TGATGCTTCTTAAGTAATTT+TGG | 0.117153 | 4.2:-29041620 | None:intergenic |
| TGGTTATCATTGGATATTTA+AGG | 0.178468 | 4.2:+29042686 | MS.gene070759:CDS |
| GTTCCACTTTCTTGGCTCTT+TGG | 0.178987 | 4.2:-29040738 | None:intergenic |
| TCCACAGCATGAGCAATTTA+AGG | 0.189656 | 4.2:-29041018 | None:intergenic |
| GATGATGTGAGTAGAATTTA+TGG | 0.192036 | 4.2:+29039966 | MS.gene070759:CDS |
| TAAAGAGGTAACCTGCTTAT+TGG | 0.208038 | 4.2:+29039743 | MS.gene070759:CDS |
| CGTGGATTTCATCCTGAAAT+TGG | 0.221484 | 4.2:+29040608 | MS.gene070759:CDS |
| CATTATGATCCAACTAATTT+AGG | 0.227029 | 4.2:+29042408 | MS.gene070759:CDS |
| CAAGTTCAATTGTCTAAGTT+TGG | 0.233879 | 4.2:-29041951 | None:intergenic |
| TTCGGAGATGCTTGATAAAA+AGG | 0.240824 | 4.2:+29041664 | MS.gene070759:CDS |
| TTCCACTTTCTTGGCTCTTT+GGG | 0.243392 | 4.2:-29040737 | None:intergenic |
| AGAACTCTTAAACCAATTTC+AGG | 0.250587 | 4.2:-29040620 | None:intergenic |
| TGCTTAGAAATCCTAAATTT+GGG | 0.258164 | 4.2:+29041884 | MS.gene070759:CDS |
| AGTTGAACAACTGGATAAAA+TGG | 0.264464 | 4.2:+29040142 | MS.gene070759:CDS |
| CCAGAACTCAAATTCCAATA+TGG | 0.273701 | 4.2:+29042283 | MS.gene070759:CDS |
| CCATATTGGAATTTGAGTTC+TGG | 0.288196 | 4.2:-29042283 | None:intergenic |
| CTTCAAATCCCTAATGCTAT+TGG | 0.289572 | 4.2:+29041851 | MS.gene070759:CDS |
| CCCAACACTTTAATTGCTAA+TGG | 0.290201 | 4.2:-29040386 | None:intergenic |
| TCAAGATGTATGGGAATAAC+TGG | 0.291789 | 4.2:-29042489 | None:intergenic |
| AAAGAGGTAACCTGCTTATT+GGG | 0.298676 | 4.2:+29039744 | MS.gene070759:CDS |
| TCAGATATGCAATCTTTCTA+TGG | 0.306563 | 4.2:+29040052 | MS.gene070759:CDS |
| GCAGCCCCTTGGTTTGCATT+TGG | 0.309762 | 4.2:+29042650 | MS.gene070759:CDS |
| ATTTGTGGAATGGGTGGAAT+AGG | 0.313714 | 4.2:+29039876 | MS.gene070759:CDS |
| CATATTGGAATTTGAGTTCT+GGG | 0.314566 | 4.2:-29042282 | None:intergenic |
| TTGAGAGAGTATGGAGTAGA+TGG | 0.324745 | 4.2:+29040230 | MS.gene070759:CDS |
| GCGTTCCATCTCAATTAAAC+TGG | 0.327113 | 4.2:-29042086 | None:intergenic |
| TGTAACCATCCAATAGCATT+AGG | 0.329640 | 4.2:-29041860 | None:intergenic |
| GATAATGATGTTCGAGTTGT+AGG | 0.332565 | 4.2:+29039852 | MS.gene070759:CDS |
| CTGTGGAATTTGAATTTCTC+AGG | 0.333076 | 4.2:+29041034 | MS.gene070759:CDS |
| AGATCTAGCAACTCAAGATT+TGG | 0.335086 | 4.2:-29041443 | None:intergenic |
| ATTATCATAATTTCTAGAAA+TGG | 0.340411 | 4.2:+29040200 | MS.gene070759:CDS |
| AAAATCGAAAGGATGGCTTT+AGG | 0.342429 | 4.2:-29041730 | None:intergenic |
| CCATTAGCAATTAAAGTGTT+GGG | 0.347495 | 4.2:+29040386 | MS.gene070759:CDS |
| GTAGCAACATCAGGCAACTA+TGG | 0.368218 | 4.2:+29041170 | MS.gene070759:CDS |
| GGGCATATCTTGAGAGAGTA+TGG | 0.369513 | 4.2:+29040221 | MS.gene070759:CDS |
| GAAAGTTCCTTGATGCTAGA+AGG | 0.372142 | 4.2:-29041929 | None:intergenic |
| CATCCTTCACCTAAATTAGT+TGG | 0.372567 | 4.2:-29042417 | None:intergenic |
| GTCATTTGGGGTATCTCTGT+TGG | 0.376265 | 4.2:+29041077 | MS.gene070759:CDS |
| GAAGGATGGTCACCTCATAT+TGG | 0.379545 | 4.2:+29042432 | MS.gene070759:CDS |
| ACTTTACCTGGTGATATAGT+TGG | 0.381490 | 4.2:+29039780 | MS.gene070759:CDS |
| ACATCCCCTTCATGCATAAC+AGG | 0.393247 | 4.2:-29042351 | None:intergenic |
| TGCACGATGTTGACTGGTAT+TGG | 0.404698 | 4.2:-29041697 | None:intergenic |
| CTTGAGTTGCTAGATCTTGA+AGG | 0.409840 | 4.2:+29041449 | MS.gene070759:CDS |
| TTGGATATTTAAGGAGGATC+TGG | 0.411696 | 4.2:+29042695 | MS.gene070759:CDS |
| AAGGATGGTCACCTCATATT+GGG | 0.411777 | 4.2:+29042433 | MS.gene070759:CDS |
| GCCCCTTGGTTTGCATTTGG+AGG | 0.416561 | 4.2:+29042653 | MS.gene070759:CDS |
| TGGGTAACGCCGTAAAACTA+TGG | 0.417626 | 4.2:-29040930 | None:intergenic |
| TGGTCACCTCATATTGGGTT+CGG | 0.418862 | 4.2:+29042438 | MS.gene070759:CDS |
| TTATCATAATTTCTAGAAAT+GGG | 0.422186 | 4.2:+29040201 | MS.gene070759:CDS |
| TCATTTGGGGTATCTCTGTT+GGG | 0.423431 | 4.2:+29041078 | MS.gene070759:CDS |
| AGAAAATATTGAAGAAATAC+AGG | 0.423438 | 4.2:+29040952 | MS.gene070759:CDS |
| ATTGAATTGTTAGCTGTAGT+TGG | 0.426582 | 4.2:+29042627 | MS.gene070759:CDS |
| CATGCAGTCCGATCTTCCTA+TGG | 0.430543 | 4.2:+29042239 | MS.gene070759:CDS |
| CAAACTTAGACAATTGAACT+TGG | 0.431705 | 4.2:+29041952 | MS.gene070759:CDS |
| CAAGAAAGTGGAACAGGCTG+TGG | 0.433148 | 4.2:+29040747 | MS.gene070759:CDS |
| GCTGTAGTTGGGCAGCCCCT+TGG | 0.435876 | 4.2:+29042639 | MS.gene070759:CDS |
| CTTTCCTACAAAACAATTGA+AGG | 0.437185 | 4.2:-29040289 | None:intergenic |
| GATTGAAAATATTATTAAAG+AGG | 0.437315 | 4.2:+29039728 | MS.gene070759:CDS |
| CTTTACCTGGTGATATAGTT+GGG | 0.441743 | 4.2:+29039781 | MS.gene070759:CDS |
| TCCATTAGCAATTAAAGTGT+TGG | 0.441966 | 4.2:+29040385 | MS.gene070759:CDS |
| GTTCGAGTTGTAGGGATTTG+TGG | 0.442675 | 4.2:+29039861 | MS.gene070759:CDS |
| CATCTAATTTGATTCGAACT+AGG | 0.444996 | 4.2:+29040075 | MS.gene070759:CDS |
| ATCAGTTCAACAAGATTATC+CGG | 0.452103 | 4.2:-29041139 | None:intergenic |
| TATGGAGACGATGGCCCAAT+TGG | 0.453331 | 4.2:+29039984 | MS.gene070759:CDS |
| CATGGTTTGTTCAAAGAACT+AGG | 0.455434 | 4.2:+29040689 | MS.gene070759:CDS |
| TTTGTGGAATGGGTGGAATA+GGG | 0.456745 | 4.2:+29039877 | MS.gene070759:CDS |
| GCACGATGTTGACTGGTATT+GGG | 0.457671 | 4.2:-29041696 | None:intergenic |
| GCCGTAAAACTATGGCTTCA+AGG | 0.458153 | 4.2:-29040922 | None:intergenic |
| TGTTGATGAAGTTGAACAAC+TGG | 0.459075 | 4.2:+29040133 | MS.gene070759:CDS |
| AAGAGCCAAGAAAGTGGAAC+AGG | 0.459689 | 4.2:+29040741 | MS.gene070759:CDS |
| TGTGGGTAGTTCAATAATCA+TGG | 0.463424 | 4.2:+29042320 | MS.gene070759:CDS |
| CTCAAACATCTAAATCTCTC+AGG | 0.464415 | 4.2:+29041593 | MS.gene070759:CDS |
| CTGCCCCAGTTTAATTGAGA+TGG | 0.465088 | 4.2:+29042081 | MS.gene070759:CDS |
| TCCTACCTCGTAGCAACATC+AGG | 0.468057 | 4.2:+29041161 | MS.gene070759:CDS |
| TCTGTCATGTTTGCAATACC+TGG | 0.468540 | 4.2:+29041808 | MS.gene070759:CDS |
| ACTGGCAAGACAGTATTTGA+TGG | 0.471015 | 4.2:-29042010 | None:intergenic |
| TACATTACCTTCTAGCATCA+AGG | 0.475942 | 4.2:+29041922 | MS.gene070759:CDS |
| GTAACCATCCAATAGCATTA+GGG | 0.478792 | 4.2:-29041859 | None:intergenic |
| TTATCCGGCTGAAAACTTGA+TGG | 0.482776 | 4.2:-29041124 | None:intergenic |
| AGTTGTAGGGATTTGTGGAA+TGG | 0.486328 | 4.2:+29039866 | MS.gene070759:CDS |
| ACAGTATTTGATGGGAGCTC+AGG | 0.486943 | 4.2:-29042001 | None:intergenic |
| TTGAATTGTTAGCTGTAGTT+GGG | 0.488621 | 4.2:+29042628 | MS.gene070759:CDS |
| ACATCCATGATATCTTTCCT+TGG | 0.488646 | 4.2:-29040473 | None:intergenic |
| AGATCTGGTGACAGTTGAGT+TGG | 0.488762 | 4.2:+29042515 | MS.gene070759:CDS |
| CCATCACCTGTTATGCATGA+AGG | 0.488994 | 4.2:+29042345 | MS.gene070759:CDS |
| ATGCATGAAGGGGATGTGAT+AGG | 0.492631 | 4.2:+29042357 | MS.gene070759:CDS |
| TCATTCATTACCTGTGAGAA+GGG | 0.496721 | 4.2:+29040653 | MS.gene070759:CDS |
| AATTGCTAATGGAAGGCCAT+TGG | 0.500423 | 4.2:-29040375 | None:intergenic |
| GAATCCAAGGAAAGATATCA+TGG | 0.501641 | 4.2:+29040469 | MS.gene070759:CDS |
| CGAAAACGTGAAGATTCAGT+TGG | 0.503460 | 4.2:+29041761 | MS.gene070759:CDS |
| GTTGTAGGGATTTGTGGAAT+GGG | 0.503659 | 4.2:+29039867 | MS.gene070759:CDS |
| CGTTCCATCTCAATTAAACT+GGG | 0.505667 | 4.2:-29042085 | None:intergenic |
| AGATTTGTTTCCCAATAAGC+AGG | 0.507055 | 4.2:-29039754 | None:intergenic |
| TGAAAACCGAACCCAATATG+AGG | 0.508016 | 4.2:-29042444 | None:intergenic |
| ATGGTTTAACAAACAAAATG+TGG | 0.509330 | 4.2:+29042302 | MS.gene070759:CDS |
| CATCCATTGGTATCCTAAGA+AGG | 0.509538 | 4.2:+29041498 | MS.gene070759:CDS |
| GAAGGGCATCATTACGATCC+AGG | 0.509866 | 4.2:-29040271 | None:intergenic |
| GATGGAACGCTGTTATAGAA+TGG | 0.511117 | 4.2:+29042099 | MS.gene070759:CDS |
| AACAAATCTTCAACTTTACC+TGG | 0.513137 | 4.2:+29039768 | MS.gene070759:CDS |
| AAATGGACATAAAACGAGAA+TGG | 0.519864 | 4.2:+29040159 | MS.gene070759:CDS |
| CACCCAAAGAGCCAAGAAAG+TGG | 0.520509 | 4.2:+29040735 | MS.gene070759:CDS |
| GTTCAGATTGATCCATCCAT+TGG | 0.523030 | 4.2:+29041485 | MS.gene070759:CDS |
| TGTGGATGCACGATGTTGAC+TGG | 0.523813 | 4.2:-29041703 | None:intergenic |
| TGGATTAGAGGATACGGAAA+AGG | 0.524757 | 4.2:+29040514 | MS.gene070759:CDS |
| GATCCAACTAATTTAGGTGA+AGG | 0.524963 | 4.2:+29042414 | MS.gene070759:CDS |
| AAACGAGAATGGCTAGGCAC+AGG | 0.527205 | 4.2:+29040170 | MS.gene070759:CDS |
| AAGGGATTGCATGATATTAG+TGG | 0.527532 | 4.2:+29042603 | MS.gene070759:CDS |
| CAAATGATGCACAGTAGAAG+TGG | 0.529828 | 4.2:+29042732 | MS.gene070759:CDS |
| CAATGTTATCTCAGAAAACA+TGG | 0.530298 | 4.2:+29040787 | MS.gene070759:CDS |
| TATATGAATTGTATTACGAA+GGG | 0.530623 | 4.2:+29042585 | MS.gene070759:CDS |
| GAACAGGCTGTGGGACTACA+AGG | 0.532019 | 4.2:+29040757 | MS.gene070759:CDS |
| TTATATGAATTGTATTACGA+AGG | 0.532869 | 4.2:+29042584 | MS.gene070759:CDS |
| ATAATGATGTTCGAGTTGTA+GGG | 0.540457 | 4.2:+29039853 | MS.gene070759:CDS |
| CATCACCTGTTATGCATGAA+GGG | 0.544420 | 4.2:+29042346 | MS.gene070759:CDS |
| ATCATTCATTACCTGTGAGA+AGG | 0.544959 | 4.2:+29040652 | MS.gene070759:CDS |
| CCTTCATGCATAACAGGTGA+TGG | 0.545161 | 4.2:-29042345 | None:intergenic |
| ACACTTTAATTGCTAATGGA+AGG | 0.548884 | 4.2:-29040382 | None:intergenic |
| CTGGCAAGACAGTATTTGAT+GGG | 0.550997 | 4.2:-29042009 | None:intergenic |
| AGTATACAAAGTTCAACTCC+TGG | 0.551355 | 4.2:+29040253 | MS.gene070759:CDS |
| GATTGCAGAAACTTATGTCC+AGG | 0.552849 | 4.2:-29041826 | None:intergenic |
| ACAGGAGATGACAACATTGA+GGG | 0.558488 | 4.2:+29040970 | MS.gene070759:CDS |
| GACCTCCAAATGCAAACCAA+GGG | 0.558894 | 4.2:-29042655 | None:intergenic |
| GCTTAGAAATCCTAAATTTG+GGG | 0.560092 | 4.2:+29041885 | MS.gene070759:CDS |
| CATTAGCAATTAAAGTGTTG+GGG | 0.560753 | 4.2:+29040387 | MS.gene070759:CDS |
| ACAATATCAATCTGACCCAT+AGG | 0.561530 | 4.2:-29042255 | None:intergenic |
| CAAGATTAAGAGAGAATCCA+AGG | 0.563933 | 4.2:+29040456 | MS.gene070759:CDS |
| AAAAGTGATGATATCATGAA+CGG | 0.563951 | 4.2:+29040317 | MS.gene070759:CDS |
| TGACCTCCAAATGCAAACCA+AGG | 0.566225 | 4.2:-29042656 | None:intergenic |
| CAACATCAGGCAACTATGGG+AGG | 0.569106 | 4.2:+29041174 | MS.gene070759:CDS |
| TTTCCTACAAAACAATTGAA+GGG | 0.569841 | 4.2:-29040288 | None:intergenic |
| CTTAGAAATCCTAAATTTGG+GGG | 0.570638 | 4.2:+29041886 | MS.gene070759:CDS |
| AATCTGACCCATAGGAAGAT+CGG | 0.571177 | 4.2:-29042247 | None:intergenic |
| AAATCCCTAATGCTATTGGA+TGG | 0.579408 | 4.2:+29041855 | MS.gene070759:CDS |
| AAGCCTTCTTAGGATACCAA+TGG | 0.580098 | 4.2:-29041501 | None:intergenic |
| CTTGATGGCAAACAAGTGAA+AGG | 0.580679 | 4.2:-29041109 | None:intergenic |
| AACGAGAATGGCTAGGCACA+GGG | 0.583261 | 4.2:+29040171 | MS.gene070759:CDS |
| TAGCAACATCAGGCAACTAT+GGG | 0.584440 | 4.2:+29041171 | MS.gene070759:CDS |
| CAACTAATTTAGGTGAAGGA+TGG | 0.586768 | 4.2:+29042418 | MS.gene070759:CDS |
| GCCTTAAATTGCTCATGCTG+TGG | 0.587602 | 4.2:+29041017 | MS.gene070759:CDS |
| GTAGGGATTTGTGGAATGGG+TGG | 0.591904 | 4.2:+29039870 | MS.gene070759:CDS |
| ATGCAGTCCGATCTTCCTAT+GGG | 0.592893 | 4.2:+29042240 | MS.gene070759:CDS |
| CTCTGAATGGAGAAGTGCAT+TGG | 0.593373 | 4.2:+29040433 | MS.gene070759:CDS |
| TACAGGAGATGACAACATTG+AGG | 0.602216 | 4.2:+29040969 | MS.gene070759:CDS |
| GCAACTATGGGAGGGTACAA+AGG | 0.610415 | 4.2:+29041183 | MS.gene070759:CDS |
| TTAGAAATCCTAAATTTGGG+GGG | 0.615092 | 4.2:+29041887 | MS.gene070759:CDS |
| TTGGATGATACAACTCCTTG+AGG | 0.615405 | 4.2:+29042129 | MS.gene070759:CDS |
| TGCATCCCAACTATATCACC+AGG | 0.616986 | 4.2:-29039786 | None:intergenic |
| ATCACCTGTTATGCATGAAG+GGG | 0.624554 | 4.2:+29042347 | MS.gene070759:CDS |
| TGGTTTAACAAACAAAATGT+GGG | 0.624690 | 4.2:+29042303 | MS.gene070759:CDS |
| AACATCAGGCAACTATGGGA+GGG | 0.631061 | 4.2:+29041175 | MS.gene070759:CDS |
| CTTCTTAGGATACCAATGGA+TGG | 0.632810 | 4.2:-29041497 | None:intergenic |
| TTATCATTGGATATTTAAGG+AGG | 0.636446 | 4.2:+29042689 | MS.gene070759:CDS |
| GATGTACTAACATATGCCAA+TGG | 0.637119 | 4.2:+29040359 | MS.gene070759:CDS |
| ATGGTCGAGATGTCTCTGAA+TGG | 0.638750 | 4.2:+29040420 | MS.gene070759:CDS |
| GCCTGATGTTGCTACGAGGT+AGG | 0.640724 | 4.2:-29041162 | None:intergenic |
| AAGAAAGTGGAACAGGCTGT+GGG | 0.646062 | 4.2:+29040748 | MS.gene070759:CDS |
| CAACATTATCAAGAACCACA+AGG | 0.650151 | 4.2:-29040115 | None:intergenic |
| ATATGTGTCAAATTATGTAG+AGG | 0.652368 | 4.2:-29041368 | None:intergenic |
| AGGATGGCTTTAGGACTCTG+TGG | 0.652754 | 4.2:-29041721 | None:intergenic |
| GACATAAAACGAGAATGGCT+AGG | 0.652767 | 4.2:+29040164 | MS.gene070759:CDS |
| AGTAGAATTTATGGAGACGA+TGG | 0.656819 | 4.2:+29039975 | MS.gene070759:CDS |
| CATTCATTACCTGTGAGAAG+GGG | 0.658159 | 4.2:+29040654 | MS.gene070759:CDS |
| AACATTATCAAGAACCACAA+GGG | 0.671477 | 4.2:-29040114 | None:intergenic |
| ATGTGAGATAAAATCCCTTG+TGG | 0.673528 | 4.2:+29040100 | MS.gene070759:CDS |
| ACCTCCAAATGCAAACCAAG+GGG | 0.679849 | 4.2:-29042654 | None:intergenic |
| CATGACAGACGAGACAACGA+AGG | 0.680255 | 4.2:-29041794 | None:intergenic |
| AGTTGCCTGATGTTGCTACG+AGG | 0.742338 | 4.2:-29041166 | None:intergenic |
| GTTCCATCTCAATTAAACTG+GGG | 0.752473 | 4.2:-29042084 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATTGAAAATATTATTAAAG+AGG | + | chr4.2:29039728-29039747 | MS.gene070759:CDS | 15.0% |
| !!! | ATTATCATAATTTCTAGAAA+TGG | + | chr4.2:29040200-29040219 | MS.gene070759:CDS | 15.0% |
| !!! | TTATCATAATTTCTAGAAAT+GGG | + | chr4.2:29040201-29040220 | MS.gene070759:CDS | 15.0% |
| !! | ACAAAGAAAAATAGAACATT+CGG | + | chr4.2:29041646-29041665 | MS.gene070759:CDS | 20.0% |
| !! | AGAAAATATTGAAGAAATAC+AGG | + | chr4.2:29040952-29040971 | MS.gene070759:CDS | 20.0% |
| !! | AGATATAGACAAAAAGAAAA+AGG | - | chr4.2:29042167-29042186 | None:intergenic | 20.0% |
| !! | GTTAATCGATTATAGAAAAA+TGG | - | chr4.2:29040845-29040864 | None:intergenic | 20.0% |
| !! | TATATGAATTGTATTACGAA+GGG | + | chr4.2:29042585-29042604 | MS.gene070759:CDS | 20.0% |
| !! | TTAATTTAAAAAGCCTTCTT+AGG | - | chr4.2:29041514-29041533 | None:intergenic | 20.0% |
| !! | TTATATGAATTGTATTACGA+AGG | + | chr4.2:29042584-29042603 | MS.gene070759:CDS | 20.0% |
| !!! | ATGTTTCTTTTATGAAAAAG+AGG | + | chr4.2:29040556-29040575 | MS.gene070759:CDS | 20.0% |
| !!! | GTATTTCTTCAATATTTTCT+GGG | - | chr4.2:29040952-29040971 | None:intergenic | 20.0% |
| !!! | TGTATTTCTTCAATATTTTC+TGG | - | chr4.2:29040953-29040972 | None:intergenic | 20.0% |
| !!! | TTTGGAGTTTTCAAAAAATT+TGG | - | chr4.2:29041428-29041447 | None:intergenic | 20.0% |
| !!! | TTTTGTTTGTTAAACCATAT+TGG | - | chr4.2:29042300-29042319 | None:intergenic | 20.0% |
| ! | AAAAGTGATGATATCATGAA+CGG | + | chr4.2:29040317-29040336 | MS.gene070759:CDS | 25.0% |
| ! | AAATTCAAAAATCGAAAGGA+TGG | - | chr4.2:29041740-29041759 | None:intergenic | 25.0% |
| ! | ATAGACAAAAAGAAAAAGGA+TGG | - | chr4.2:29042163-29042182 | None:intergenic | 25.0% |
| ! | ATATGTGTCAAATTATGTAG+AGG | - | chr4.2:29041371-29041390 | None:intergenic | 25.0% |
| ! | ATGGTTTAACAAACAAAATG+TGG | + | chr4.2:29042302-29042321 | MS.gene070759:CDS | 25.0% |
| ! | CATCAGAAAAAGAAAAACAA+AGG | - | chr4.2:29041230-29041249 | None:intergenic | 25.0% |
| ! | CATTATGATCCAACTAATTT+AGG | + | chr4.2:29042408-29042427 | MS.gene070759:CDS | 25.0% |
| ! | TAACTAACTGTAGTTAAAGA+AGG | - | chr4.2:29041284-29041303 | None:intergenic | 25.0% |
| ! | TAATACATTACCAATTTGTC+TGG | + | chr4.2:29042205-29042224 | MS.gene070759:intron | 25.0% |
| ! | TAGTGAAAAAAGTTAGCAAA+AGG | - | chr4.2:29042545-29042564 | None:intergenic | 25.0% |
| ! | TCAAAAATTGTGGTTATCAT+TGG | + | chr4.2:29042676-29042695 | MS.gene070759:CDS | 25.0% |
| ! | TCGAAAATTCAAAAATCGAA+AGG | - | chr4.2:29041744-29041763 | None:intergenic | 25.0% |
| ! | TGCTTAGAAATCCTAAATTT+GGG | + | chr4.2:29041884-29041903 | MS.gene070759:CDS | 25.0% |
| ! | TGGTTATCATTGGATATTTA+AGG | + | chr4.2:29042686-29042705 | MS.gene070759:CDS | 25.0% |
| ! | TGGTTTAACAAACAAAATGT+GGG | + | chr4.2:29042303-29042322 | MS.gene070759:CDS | 25.0% |
| ! | TTATCATTGGATATTTAAGG+AGG | + | chr4.2:29042689-29042708 | MS.gene070759:CDS | 25.0% |
| ! | TTGCTTAGAAATCCTAAATT+TGG | + | chr4.2:29041883-29041902 | MS.gene070759:CDS | 25.0% |
| ! | TTTCCTACAAAACAATTGAA+GGG | - | chr4.2:29040291-29040310 | None:intergenic | 25.0% |
| !! | AATGTCATTTGCAATAATGT+AGG | + | chr4.2:29040889-29040908 | MS.gene070759:intron | 25.0% |
| !! | CCAAAAAATGTTTTTCTTAC+TGG | - | chr4.2:29042031-29042050 | None:intergenic | 25.0% |
| !! | TGATGCTTCTTAAGTAATTT+TGG | - | chr4.2:29041623-29041642 | None:intergenic | 25.0% |
| !!! | AATTAGTTTTGATGGATTAG+AGG | + | chr4.2:29040502-29040521 | MS.gene070759:CDS | 25.0% |
| !!! | ACTTTTCTTTCTAGTCATTT+GGG | + | chr4.2:29041064-29041083 | MS.gene070759:CDS | 25.0% |
| !!! | AGATCTTTTTCAAGATGTAT+GGG | - | chr4.2:29042501-29042520 | None:intergenic | 25.0% |
| !!! | CCAGTAAGAAAAACATTTTT+TGG | + | chr4.2:29042028-29042047 | MS.gene070759:CDS | 25.0% |
| !!! | TTTGCTAACTTTTTTCACTA+AGG | + | chr4.2:29042545-29042564 | MS.gene070759:CDS | 25.0% |
| AAAAAGAAAAAGGATGGAGT+AGG | - | chr4.2:29042157-29042176 | None:intergenic | 30.0% | |
| AAATGGACATAAAACGAGAA+TGG | + | chr4.2:29040159-29040178 | MS.gene070759:CDS | 30.0% | |
| AACAAATCTTCAACTTTACC+TGG | + | chr4.2:29039768-29039787 | MS.gene070759:CDS | 30.0% | |
| AACATTATCAAGAACCACAA+GGG | - | chr4.2:29040117-29040136 | None:intergenic | 30.0% | |
| ACACTTTAATTGCTAATGGA+AGG | - | chr4.2:29040385-29040404 | None:intergenic | 30.0% | |
| AGAACTCTTAAACCAATTTC+AGG | - | chr4.2:29040623-29040642 | None:intergenic | 30.0% | |
| AGTTGAACAACTGGATAAAA+TGG | + | chr4.2:29040142-29040161 | MS.gene070759:CDS | 30.0% | |
| ATCAGTTCAACAAGATTATC+CGG | - | chr4.2:29041142-29041161 | None:intergenic | 30.0% | |
| ATTGAATTGTTAGCTGTAGT+TGG | + | chr4.2:29042627-29042646 | MS.gene070759:CDS | 30.0% | |
| CAAACTTAGACAATTGAACT+TGG | + | chr4.2:29041952-29041971 | MS.gene070759:CDS | 30.0% | |
| CAAGTTCAATTGTCTAAGTT+TGG | - | chr4.2:29041954-29041973 | None:intergenic | 30.0% | |
| CAATGTTATCTCAGAAAACA+TGG | + | chr4.2:29040787-29040806 | MS.gene070759:CDS | 30.0% | |
| CATACATCTTGAAAAAGATC+TGG | + | chr4.2:29042500-29042519 | MS.gene070759:CDS | 30.0% | |
| CTTAGAAATCCTAAATTTGG+GGG | + | chr4.2:29041886-29041905 | MS.gene070759:CDS | 30.0% | |
| CTTTCCTACAAAACAATTGA+AGG | - | chr4.2:29040292-29040311 | None:intergenic | 30.0% | |
| GATGATGTGAGTAGAATTTA+TGG | + | chr4.2:29039966-29039985 | MS.gene070759:CDS | 30.0% | |
| GCTTAGAAATCCTAAATTTG+GGG | + | chr4.2:29041885-29041904 | MS.gene070759:CDS | 30.0% | |
| TCAGATATGCAATCTTTCTA+TGG | + | chr4.2:29040052-29040071 | MS.gene070759:CDS | 30.0% | |
| TCCATTAGCAATTAAAGTGT+TGG | + | chr4.2:29040385-29040404 | MS.gene070759:CDS | 30.0% | |
| TTACCAATTTGTCTGGTATA+AGG | + | chr4.2:29042212-29042231 | MS.gene070759:intron | 30.0% | |
| TTAGAAATCCTAAATTTGGG+GGG | + | chr4.2:29041887-29041906 | MS.gene070759:CDS | 30.0% | |
| TTGAATTGTTAGCTGTAGTT+GGG | + | chr4.2:29042628-29042647 | MS.gene070759:CDS | 30.0% | |
| ! | AGTATTCCTCACAACATTTT+TGG | + | chr4.2:29041560-29041579 | MS.gene070759:CDS | 30.0% |
| ! | CATATTGGAATTTGAGTTCT+GGG | - | chr4.2:29042285-29042304 | None:intergenic | 30.0% |
| ! | CATCTAATTTGATTCGAACT+AGG | + | chr4.2:29040075-29040094 | MS.gene070759:CDS | 30.0% |
| ! | CCATTAGCAATTAAAGTGTT+GGG | + | chr4.2:29040386-29040405 | MS.gene070759:CDS | 30.0% |
| !! | ATAATGATGTTCGAGTTGTA+GGG | + | chr4.2:29039853-29039872 | MS.gene070759:CDS | 30.0% |
| !! | CACTTTTCTTTCTAGTCATT+TGG | + | chr4.2:29041063-29041082 | MS.gene070759:CDS | 30.0% |
| !! | CATTAGCAATTAAAGTGTTG+GGG | + | chr4.2:29040387-29040406 | MS.gene070759:CDS | 30.0% |
| !! | CTTTTCTTTCTAGTCATTTG+GGG | + | chr4.2:29041065-29041084 | MS.gene070759:CDS | 30.0% |
| !! | GTTATAGAATGGCTTTTTCT+TGG | + | chr4.2:29042110-29042129 | MS.gene070759:CDS | 30.0% |
| !!! | AAGAGAGTTTTAGATTTTCG+TGG | + | chr4.2:29040590-29040609 | MS.gene070759:CDS | 30.0% |
| !!! | CAGATCTTTTTCAAGATGTA+TGG | - | chr4.2:29042502-29042521 | None:intergenic | 30.0% |
| !!! | GTACTTCGAATTAGTTTTGA+TGG | + | chr4.2:29040494-29040513 | MS.gene070759:CDS | 30.0% |
| !!! | TTTTGATGGATTAGAGGATA+CGG | + | chr4.2:29040508-29040527 | MS.gene070759:CDS | 30.0% |
| !!! | TTTTTTGGTAGATATGTAGC+TGG | + | chr4.2:29042043-29042062 | MS.gene070759:CDS | 30.0% |
| AAAATCGAAAGGATGGCTTT+AGG | - | chr4.2:29041733-29041752 | None:intergenic | 35.0% | |
| AAAGAGGTAACCTGCTTATT+GGG | + | chr4.2:29039744-29039763 | MS.gene070759:CDS | 35.0% | |
| AAATCCCTAATGCTATTGGA+TGG | + | chr4.2:29041855-29041874 | MS.gene070759:CDS | 35.0% | |
| AAGGGATTGCATGATATTAG+TGG | + | chr4.2:29042603-29042622 | MS.gene070759:CDS | 35.0% | |
| AATTGTTTCCCCCCAAATTT+AGG | - | chr4.2:29041898-29041917 | None:intergenic | 35.0% | |
| ACAATATCAATCTGACCCAT+AGG | - | chr4.2:29042258-29042277 | None:intergenic | 35.0% | |
| ACATCCATGATATCTTTCCT+TGG | - | chr4.2:29040476-29040495 | None:intergenic | 35.0% | |
| ACTTTACCTGGTGATATAGT+TGG | + | chr4.2:29039780-29039799 | MS.gene070759:CDS | 35.0% | |
| AGATCTAGCAACTCAAGATT+TGG | - | chr4.2:29041446-29041465 | None:intergenic | 35.0% | |
| AGTAGAATTTATGGAGACGA+TGG | + | chr4.2:29039975-29039994 | MS.gene070759:CDS | 35.0% | |
| AGTATACAAAGTTCAACTCC+TGG | + | chr4.2:29040253-29040272 | MS.gene070759:CDS | 35.0% | |
| ATCATTCATTACCTGTGAGA+AGG | + | chr4.2:29040652-29040671 | MS.gene070759:CDS | 35.0% | |
| ATGTGAGATAAAATCCCTTG+TGG | + | chr4.2:29040100-29040119 | MS.gene070759:CDS | 35.0% | |
| CAACATTATCAAGAACCACA+AGG | - | chr4.2:29040118-29040137 | None:intergenic | 35.0% | |
| CAACTAATTTAGGTGAAGGA+TGG | + | chr4.2:29042418-29042437 | MS.gene070759:CDS | 35.0% | |
| CAAGATTAAGAGAGAATCCA+AGG | + | chr4.2:29040456-29040475 | MS.gene070759:CDS | 35.0% | |
| CAAGTATGTAACAGATGCTT+AGG | + | chr4.2:29042773-29042792 | MS.gene070759:CDS | 35.0% | |
| CATCCTTCACCTAAATTAGT+TGG | - | chr4.2:29042420-29042439 | None:intergenic | 35.0% | |
| CATTTGGAGGTCAAAAATTG+TGG | + | chr4.2:29042666-29042685 | MS.gene070759:CDS | 35.0% | |
| CCAGAACTCAAATTCCAATA+TGG | + | chr4.2:29042283-29042302 | MS.gene070759:CDS | 35.0% | |
| CCCAACACTTTAATTGCTAA+TGG | - | chr4.2:29040389-29040408 | None:intergenic | 35.0% | |
| CGTTCCATCTCAATTAAACT+GGG | - | chr4.2:29042088-29042107 | None:intergenic | 35.0% | |
| CTCAAACATCTAAATCTCTC+AGG | + | chr4.2:29041593-29041612 | MS.gene070759:CDS | 35.0% | |
| CTGTGGAATTTGAATTTCTC+AGG | + | chr4.2:29041034-29041053 | MS.gene070759:CDS | 35.0% | |
| CTTCAAATCCCTAATGCTAT+TGG | + | chr4.2:29041851-29041870 | MS.gene070759:CDS | 35.0% | |
| CTTTACCTGGTGATATAGTT+GGG | + | chr4.2:29039781-29039800 | MS.gene070759:CDS | 35.0% | |
| GAATCCAAGGAAAGATATCA+TGG | + | chr4.2:29040469-29040488 | MS.gene070759:CDS | 35.0% | |
| GATCCAACTAATTTAGGTGA+AGG | + | chr4.2:29042414-29042433 | MS.gene070759:CDS | 35.0% | |
| GATGTACTAACATATGCCAA+TGG | + | chr4.2:29040359-29040378 | MS.gene070759:CDS | 35.0% | |
| GTAACCATCCAATAGCATTA+GGG | - | chr4.2:29041862-29041881 | None:intergenic | 35.0% | |
| GTTCCATCTCAATTAAACTG+GGG | - | chr4.2:29042087-29042106 | None:intergenic | 35.0% | |
| TAAAGAGGTAACCTGCTTAT+TGG | + | chr4.2:29039743-29039762 | MS.gene070759:CDS | 35.0% | |
| TACATTACCTTCTAGCATCA+AGG | + | chr4.2:29041922-29041941 | MS.gene070759:CDS | 35.0% | |
| TCAAGATGTATGGGAATAAC+TGG | - | chr4.2:29042492-29042511 | None:intergenic | 35.0% | |
| TCATTCATTACCTGTGAGAA+GGG | + | chr4.2:29040653-29040672 | MS.gene070759:CDS | 35.0% | |
| TGTAACCATCCAATAGCATT+AGG | - | chr4.2:29041863-29041882 | None:intergenic | 35.0% | |
| TGTGGGTAGTTCAATAATCA+TGG | + | chr4.2:29042320-29042339 | MS.gene070759:CDS | 35.0% | |
| TTCGGAGATGCTTGATAAAA+AGG | + | chr4.2:29041664-29041683 | MS.gene070759:CDS | 35.0% | |
| TTGGATATTTAAGGAGGATC+TGG | + | chr4.2:29042695-29042714 | MS.gene070759:CDS | 35.0% | |
| ! | AAGGGGAGAATTTTTATGCA+TGG | + | chr4.2:29040671-29040690 | MS.gene070759:CDS | 35.0% |
| ! | AGATTTGTTTCCCAATAAGC+AGG | - | chr4.2:29039757-29039776 | None:intergenic | 35.0% |
| ! | CCATATTGGAATTTGAGTTC+TGG | - | chr4.2:29042286-29042305 | None:intergenic | 35.0% |
| ! | GGTTTTCAAAGTAAACAGTG+TGG | + | chr4.2:29042459-29042478 | MS.gene070759:CDS | 35.0% |
| ! | TGTTGATGAAGTTGAACAAC+TGG | + | chr4.2:29040133-29040152 | MS.gene070759:CDS | 35.0% |
| ! | TTTTCAATCTCTGCATGTTG+TGG | - | chr4.2:29039717-29039736 | None:intergenic | 35.0% |
| !! | ACCTTGAAGCCATAGTTTTA+CGG | + | chr4.2:29040921-29040940 | MS.gene070759:CDS | 35.0% |
| !! | ATGCCCTTCAATTGTTTTGT+AGG | + | chr4.2:29040285-29040304 | MS.gene070759:CDS | 35.0% |
| !! | CATGGTTTGTTCAAAGAACT+AGG | + | chr4.2:29040689-29040708 | MS.gene070759:CDS | 35.0% |
| !! | GATAATGATGTTCGAGTTGT+AGG | + | chr4.2:29039852-29039871 | MS.gene070759:CDS | 35.0% |
| !!! | AGTTGCTTTTGTACTCCAAT+TGG | - | chr4.2:29040002-29040021 | None:intergenic | 35.0% |
| !!! | GTTGCTTTTGTACTCCAATT+GGG | - | chr4.2:29040001-29040020 | None:intergenic | 35.0% |
| AAAAATTCTCCCCTTCTCAC+AGG | - | chr4.2:29040666-29040685 | None:intergenic | 40.0% | |
| AAGCCTTCTTAGGATACCAA+TGG | - | chr4.2:29041504-29041523 | None:intergenic | 40.0% | |
| AAGGATGGTCACCTCATATT+GGG | + | chr4.2:29042433-29042452 | MS.gene070759:CDS | 40.0% | |
| AATCTGACCCATAGGAAGAT+CGG | - | chr4.2:29042250-29042269 | None:intergenic | 40.0% | |
| AATTGCTAATGGAAGGCCAT+TGG | - | chr4.2:29040378-29040397 | None:intergenic | 40.0% | |
| ACAGGAGATGACAACATTGA+GGG | + | chr4.2:29040970-29040989 | MS.gene070759:CDS | 40.0% | |
| ACTGGCAAGACAGTATTTGA+TGG | - | chr4.2:29042013-29042032 | None:intergenic | 40.0% | |
| AGTTGTAGGGATTTGTGGAA+TGG | + | chr4.2:29039866-29039885 | MS.gene070759:CDS | 40.0% | |
| ATCACCTGTTATGCATGAAG+GGG | + | chr4.2:29042347-29042366 | MS.gene070759:CDS | 40.0% | |
| ATTTGTGGAATGGGTGGAAT+AGG | + | chr4.2:29039876-29039895 | MS.gene070759:CDS | 40.0% | |
| CAAATGATGCACAGTAGAAG+TGG | + | chr4.2:29042732-29042751 | MS.gene070759:CDS | 40.0% | |
| CATCACCTGTTATGCATGAA+GGG | + | chr4.2:29042346-29042365 | MS.gene070759:CDS | 40.0% | |
| CATCCATTGGTATCCTAAGA+AGG | + | chr4.2:29041498-29041517 | MS.gene070759:CDS | 40.0% | |
| CATTCATTACCTGTGAGAAG+GGG | + | chr4.2:29040654-29040673 | MS.gene070759:CDS | 40.0% | |
| CGAAAACGTGAAGATTCAGT+TGG | + | chr4.2:29041761-29041780 | MS.gene070759:CDS | 40.0% | |
| CGTGGATTTCATCCTGAAAT+TGG | + | chr4.2:29040608-29040627 | MS.gene070759:CDS | 40.0% | |
| CTCAGACCAAAAATGTTGTG+AGG | - | chr4.2:29041569-29041588 | None:intergenic | 40.0% | |
| CTGGCAAGACAGTATTTGAT+GGG | - | chr4.2:29042012-29042031 | None:intergenic | 40.0% | |
| CTTCTTAGGATACCAATGGA+TGG | - | chr4.2:29041500-29041519 | None:intergenic | 40.0% | |
| GAAAGTTCCTTGATGCTAGA+AGG | - | chr4.2:29041932-29041951 | None:intergenic | 40.0% | |
| GACATAAAACGAGAATGGCT+AGG | + | chr4.2:29040164-29040183 | MS.gene070759:CDS | 40.0% | |
| GATGGAACGCTGTTATAGAA+TGG | + | chr4.2:29042099-29042118 | MS.gene070759:CDS | 40.0% | |
| GATTGCAGAAACTTATGTCC+AGG | - | chr4.2:29041829-29041848 | None:intergenic | 40.0% | |
| GCACCTTATACCAGACAAAT+TGG | - | chr4.2:29042218-29042237 | None:intergenic | 40.0% | |
| GCGTTCCATCTCAATTAAAC+TGG | - | chr4.2:29042089-29042108 | None:intergenic | 40.0% | |
| GTTCAGATTGATCCATCCAT+TGG | + | chr4.2:29041485-29041504 | MS.gene070759:CDS | 40.0% | |
| GTTGTAGGGATTTGTGGAAT+GGG | + | chr4.2:29039867-29039886 | MS.gene070759:CDS | 40.0% | |
| TACAGGAGATGACAACATTG+AGG | + | chr4.2:29040969-29040988 | MS.gene070759:CDS | 40.0% | |
| TAGCAACATCAGGCAACTAT+GGG | + | chr4.2:29041171-29041190 | MS.gene070759:CDS | 40.0% | |
| TCCACAGCATGAGCAATTTA+AGG | - | chr4.2:29041021-29041040 | None:intergenic | 40.0% | |
| TCTGTCATGTTTGCAATACC+TGG | + | chr4.2:29041808-29041827 | MS.gene070759:CDS | 40.0% | |
| TGAAAACCGAACCCAATATG+AGG | - | chr4.2:29042447-29042466 | None:intergenic | 40.0% | |
| TTATCCGGCTGAAAACTTGA+TGG | - | chr4.2:29041127-29041146 | None:intergenic | 40.0% | |
| TTGGATGATACAACTCCTTG+AGG | + | chr4.2:29042129-29042148 | MS.gene070759:CDS | 40.0% | |
| TTTGTGGAATGGGTGGAATA+GGG | + | chr4.2:29039877-29039896 | MS.gene070759:CDS | 40.0% | |
| ! | CTTGAGTTGCTAGATCTTGA+AGG | + | chr4.2:29041449-29041468 | MS.gene070759:CDS | 40.0% |
| ! | CTTGATGGCAAACAAGTGAA+AGG | - | chr4.2:29041112-29041131 | None:intergenic | 40.0% |
| ! | GTGTTGGGGACATTTTTGTA+TGG | + | chr4.2:29040401-29040420 | MS.gene070759:CDS | 40.0% |
| ! | TCATTTGGGGTATCTCTGTT+GGG | + | chr4.2:29041078-29041097 | MS.gene070759:CDS | 40.0% |
| ! | TGGATTAGAGGATACGGAAA+AGG | + | chr4.2:29040514-29040533 | MS.gene070759:CDS | 40.0% |
| ! | TTCCACTTTCTTGGCTCTTT+GGG | - | chr4.2:29040740-29040759 | None:intergenic | 40.0% |
| ! | TTGAGAGAGTATGGAGTAGA+TGG | + | chr4.2:29040230-29040249 | MS.gene070759:CDS | 40.0% |
| ! | TTTGCCATCAAGTTTTCAGC+CGG | + | chr4.2:29041120-29041139 | MS.gene070759:CDS | 40.0% |
| AACATCAGGCAACTATGGGA+GGG | + | chr4.2:29041175-29041194 | MS.gene070759:CDS | 45.0% | |
| AAGAAAGTGGAACAGGCTGT+GGG | + | chr4.2:29040748-29040767 | MS.gene070759:CDS | 45.0% | |
| AAGAGCCAAGAAAGTGGAAC+AGG | + | chr4.2:29040741-29040760 | MS.gene070759:CDS | 45.0% | |
| ACAGTATTTGATGGGAGCTC+AGG | - | chr4.2:29042004-29042023 | None:intergenic | 45.0% | |
| ACATCCCCTTCATGCATAAC+AGG | - | chr4.2:29042354-29042373 | None:intergenic | 45.0% | |
| ACCTCCAAATGCAAACCAAG+GGG | - | chr4.2:29042657-29042676 | None:intergenic | 45.0% | |
| AGATCTGGTGACAGTTGAGT+TGG | + | chr4.2:29042515-29042534 | MS.gene070759:CDS | 45.0% | |
| ATGCAGTCCGATCTTCCTAT+GGG | + | chr4.2:29042240-29042259 | MS.gene070759:CDS | 45.0% | |
| ATGCATGAAGGGGATGTGAT+AGG | + | chr4.2:29042357-29042376 | MS.gene070759:CDS | 45.0% | |
| ATGGTCGAGATGTCTCTGAA+TGG | + | chr4.2:29040420-29040439 | MS.gene070759:CDS | 45.0% | |
| CCATCACCTGTTATGCATGA+AGG | + | chr4.2:29042345-29042364 | MS.gene070759:CDS | 45.0% | |
| CCTTCATGCATAACAGGTGA+TGG | - | chr4.2:29042348-29042367 | None:intergenic | 45.0% | |
| CTGCCCCAGTTTAATTGAGA+TGG | + | chr4.2:29042081-29042100 | MS.gene070759:CDS | 45.0% | |
| GAAGGATGGTCACCTCATAT+TGG | + | chr4.2:29042432-29042451 | MS.gene070759:CDS | 45.0% | |
| GACCTCCAAATGCAAACCAA+GGG | - | chr4.2:29042658-29042677 | None:intergenic | 45.0% | |
| GCCGTAAAACTATGGCTTCA+AGG | - | chr4.2:29040925-29040944 | None:intergenic | 45.0% | |
| GCCTTAAATTGCTCATGCTG+TGG | + | chr4.2:29041017-29041036 | MS.gene070759:CDS | 45.0% | |
| GGGCATATCTTGAGAGAGTA+TGG | + | chr4.2:29040221-29040240 | MS.gene070759:CDS | 45.0% | |
| GTAGCAACATCAGGCAACTA+TGG | + | chr4.2:29041170-29041189 | MS.gene070759:CDS | 45.0% | |
| TGACCTCCAAATGCAAACCA+AGG | - | chr4.2:29042659-29042678 | None:intergenic | 45.0% | |
| TGCATCCCAACTATATCACC+AGG | - | chr4.2:29039789-29039808 | None:intergenic | 45.0% | |
| TGGGTAACGCCGTAAAACTA+TGG | - | chr4.2:29040933-29040952 | None:intergenic | 45.0% | |
| TGGTCACCTCATATTGGGTT+CGG | + | chr4.2:29042438-29042457 | MS.gene070759:CDS | 45.0% | |
| ! | CTCTGAATGGAGAAGTGCAT+TGG | + | chr4.2:29040433-29040452 | MS.gene070759:CDS | 45.0% |
| ! | GCACGATGTTGACTGGTATT+GGG | - | chr4.2:29041699-29041718 | None:intergenic | 45.0% |
| ! | GTCATTTGGGGTATCTCTGT+TGG | + | chr4.2:29041077-29041096 | MS.gene070759:CDS | 45.0% |
| ! | GTTCCACTTTCTTGGCTCTT+TGG | - | chr4.2:29040741-29040760 | None:intergenic | 45.0% |
| ! | TGCACGATGTTGACTGGTAT+TGG | - | chr4.2:29041700-29041719 | None:intergenic | 45.0% |
| !! | GTTCGAGTTGTAGGGATTTG+TGG | + | chr4.2:29039861-29039880 | MS.gene070759:CDS | 45.0% |
| AAACGAGAATGGCTAGGCAC+AGG | + | chr4.2:29040170-29040189 | MS.gene070759:CDS | 50.0% | |
| AACGAGAATGGCTAGGCACA+GGG | + | chr4.2:29040171-29040190 | MS.gene070759:CDS | 50.0% | |
| AGTTGCCTGATGTTGCTACG+AGG | - | chr4.2:29041169-29041188 | None:intergenic | 50.0% | |
| CAACATCAGGCAACTATGGG+AGG | + | chr4.2:29041174-29041193 | MS.gene070759:CDS | 50.0% | |
| CAAGAAAGTGGAACAGGCTG+TGG | + | chr4.2:29040747-29040766 | MS.gene070759:CDS | 50.0% | |
| CACAGCCTGTTCCACTTTCT+TGG | - | chr4.2:29040749-29040768 | None:intergenic | 50.0% | |
| CACCCAAAGAGCCAAGAAAG+TGG | + | chr4.2:29040735-29040754 | MS.gene070759:CDS | 50.0% | |
| CATGACAGACGAGACAACGA+AGG | - | chr4.2:29041797-29041816 | None:intergenic | 50.0% | |
| CATGCAGTCCGATCTTCCTA+TGG | + | chr4.2:29042239-29042258 | MS.gene070759:CDS | 50.0% | |
| GTAGGGATTTGTGGAATGGG+TGG | + | chr4.2:29039870-29039889 | MS.gene070759:CDS | 50.0% | |
| TATGGAGACGATGGCCCAAT+TGG | + | chr4.2:29039984-29040003 | MS.gene070759:CDS | 50.0% | |
| TCCTACCTCGTAGCAACATC+AGG | + | chr4.2:29041161-29041180 | MS.gene070759:CDS | 50.0% | |
| TGTGGATGCACGATGTTGAC+TGG | - | chr4.2:29041706-29041725 | None:intergenic | 50.0% | |
| ! | GCAACTATGGGAGGGTACAA+AGG | + | chr4.2:29041183-29041202 | MS.gene070759:CDS | 50.0% |
| !! | AGGATGGCTTTAGGACTCTG+TGG | - | chr4.2:29041724-29041743 | None:intergenic | 50.0% |
| !! | GAAGGGCATCATTACGATCC+AGG | - | chr4.2:29040274-29040293 | None:intergenic | 50.0% |
| AGGATGGAGTAGGCACCTCA+AGG | - | chr4.2:29042147-29042166 | None:intergenic | 55.0% | |
| GAACAGGCTGTGGGACTACA+AGG | + | chr4.2:29040757-29040776 | MS.gene070759:CDS | 55.0% | |
| GCCTGATGTTGCTACGAGGT+AGG | - | chr4.2:29041165-29041184 | None:intergenic | 55.0% | |
| !! | GCAGCCCCTTGGTTTGCATT+TGG | + | chr4.2:29042650-29042669 | MS.gene070759:CDS | 55.0% |
| !! | GCCCCTTGGTTTGCATTTGG+AGG | + | chr4.2:29042653-29042672 | MS.gene070759:CDS | 55.0% |
| GCTGTAGTTGGGCAGCCCCT+TGG | + | chr4.2:29042639-29042658 | MS.gene070759:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 29039713 | 29042794 | 29039713 | ID=MS.gene070759 |
| chr4.2 | mRNA | 29039713 | 29042794 | 29039713 | ID=MS.gene070759.t1;Parent=MS.gene070759 |
| chr4.2 | exon | 29039713 | 29040808 | 29039713 | ID=MS.gene070759.t1.exon1;Parent=MS.gene070759.t1 |
| chr4.2 | CDS | 29039713 | 29040808 | 29039713 | ID=cds.MS.gene070759.t1;Parent=MS.gene070759.t1 |
| chr4.2 | exon | 29040911 | 29041204 | 29040911 | ID=MS.gene070759.t1.exon2;Parent=MS.gene070759.t1 |
| chr4.2 | CDS | 29040911 | 29041204 | 29040911 | ID=cds.MS.gene070759.t1;Parent=MS.gene070759.t1 |
| chr4.2 | exon | 29041368 | 29042150 | 29041368 | ID=MS.gene070759.t1.exon3;Parent=MS.gene070759.t1 |
| chr4.2 | CDS | 29041368 | 29042150 | 29041368 | ID=cds.MS.gene070759.t1;Parent=MS.gene070759.t1 |
| chr4.2 | exon | 29042234 | 29042794 | 29042234 | ID=MS.gene070759.t1.exon4;Parent=MS.gene070759.t1 |
| chr4.2 | CDS | 29042234 | 29042794 | 29042234 | ID=cds.MS.gene070759.t1;Parent=MS.gene070759.t1 |
| Gene Sequence |
| Protein sequence |
