AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene071078


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071078.t1 MTR_5g046240 93.019 1504 70 5 55 1554 7 1479 0.0 2757
MS.gene071078.t1 MTR_1g031840 94.921 571 29 0 984 1554 192 762 0.0 1092
MS.gene071078.t1 MTR_1g031840 65.823 79 2 1 1 54 109 187 1.91e-20 98.6
MS.gene071078.t1 MTR_1g031850 94.286 70 4 0 1421 1490 2 71 8.62e-39 139
MS.gene071078.t1 MTR_2g060590 60.909 110 23 3 1081 1188 12 103 2.01e-30 117
MS.gene071078.t1 MTR_2g060580 53.846 117 28 2 1293 1409 1 91 4.82e-29 112
MS.gene071078.t1 MTR_2g060600 58.242 91 19 2 869 959 38 109 1.94e-24 99.8
MS.gene071078.t1 MTR_2g060600 73.684 38 10 0 725 762 4 41 1.10e-11 63.5
MS.gene071078.t1 MTR_2g060610 68.421 76 12 1 617 680 42 117 3.74e-24 99.4
MS.gene071078.t1 MTR_2g060565 66.667 57 19 0 1073 1129 1 57 2.81e-19 86.7
MS.gene071078.t1 MTR_2g060565 38.636 132 64 4 1365 1480 17 147 2.95e-12 66.6
MS.gene071078.t1 MTR_2g060570 45.455 99 13 1 1451 1549 1 58 3.20e-16 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071078.t1 AT4G38440 45.449 1549 702 34 12 1537 20 1448 0.0 1234

Find 340 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACTGAACAATTGCGTTTC+TGG 0.066235 5.1:-34306068 MS.gene071078:CDS
TCTTGTTGCAATCCACTTTA+TGG 0.090064 5.1:+34305765 None:intergenic
AAAACAAAGGGTATTGATTT+TGG 0.107102 5.1:-34311364 MS.gene071078:CDS
CAAGATGATAAATCTTTCTT+AGG 0.141074 5.1:-34311322 MS.gene071078:CDS
GTGCCCATGGTGGAGGATTT+TGG 0.186737 5.1:-34305108 MS.gene071078:CDS
CACTGTTGCGAAAATAAATT+TGG 0.191453 5.1:+34305868 None:intergenic
GAAGCTTTACAGGATCTTTA+TGG 0.205527 5.1:-34304275 MS.gene071078:CDS
GACTTGAGTTGATCAATTAT+TGG 0.225967 5.1:-34305525 MS.gene071078:CDS
AACACAAGGCAGGGAATATC+TGG 0.228299 5.1:+34306004 None:intergenic
GCATCAACCTGTTGTCTAAA+TGG 0.229364 5.1:-34305388 MS.gene071078:CDS
AAGGTCATTTGTTCAGTTTC+GGG 0.232044 5.1:+34305001 None:intergenic
TCCAAACGCGCATCAGCTTT+TGG 0.234899 5.1:+34304677 None:intergenic
TCCTAGACTTCGTTATCTTT+TGG 0.235517 5.1:-34307016 MS.gene071078:CDS
GGAAACATTTGAAGCTTTAC+AGG 0.245031 5.1:-34304285 MS.gene071078:CDS
TCGAACAATTTATATACTTC+TGG 0.246797 5.1:+34305736 None:intergenic
CAGTCTTGGCAGACCTTATC+AGG 0.253601 5.1:+34305335 None:intergenic
GAGGACCAGCACGCTTAGTA+TGG 0.267646 5.1:+34304525 None:intergenic
CCAATCTTTGGGACAAATTC+CGG 0.268824 5.1:+34305547 None:intergenic
GGATGTTATCATCTCATTTC+AGG 0.270008 5.1:-34304772 MS.gene071078:CDS
GAAGGTCATTTGTTCAGTTT+CGG 0.271069 5.1:+34305000 None:intergenic
GTAGGTGTTTGGTTGAATTA+AGG 0.291354 5.1:-34305240 MS.gene071078:CDS
ACAAAATAAAGAAGCTATTT+CGG 0.293780 5.1:-34304225 MS.gene071078:CDS
GTTGATCAATTATTGGCATT+TGG 0.297156 5.1:-34305518 MS.gene071078:CDS
ATCAACTCAAGTCCAATCTT+TGG 0.303377 5.1:+34305535 None:intergenic
TCCATAGAATCCTCGCTAAA+AGG 0.310999 5.1:+34307129 None:intergenic
ATCTTTCTTAGGGAAGGATT+TGG 0.311107 5.1:-34311311 MS.gene071078:CDS
TTGATCAATTATTGGCATTT+GGG 0.311837 5.1:-34305517 MS.gene071078:CDS
TCTCCTCAGCTGACATTTGC+TGG 0.315295 5.1:+34310927 None:intergenic
TAGGGAGGCATATCTTGTTT+TGG 0.319710 5.1:-34305911 MS.gene071078:CDS
CATCTCATTTCAGGAGTAGA+TGG 0.328804 5.1:-34304763 MS.gene071078:CDS
CCATGTTGGAATGGAAATAC+TGG 0.329505 5.1:-34304324 MS.gene071078:CDS
CCGGAATTTGTCCCAAAGAT+TGG 0.331262 5.1:-34305547 MS.gene071078:CDS
TGCTGCGCAACAGGCTTGTT+AGG 0.333591 5.1:-34302737 MS.gene071078:CDS
ACGAATCTACTTGCATATCT+AGG 0.336642 5.1:-34305930 MS.gene071078:CDS
CAGATGACTGGGAGGCTGTT+TGG 0.336778 5.1:-34308612 MS.gene071078:CDS
ACAAAATCCGGAAGAGATTC+TGG 0.336943 5.1:-34305475 MS.gene071078:CDS
AGGATCAGTTTCATATACTA+TGG 0.338661 5.1:-34302814 MS.gene071078:CDS
CTAAAAGGTTGAATGTTAGA+AGG 0.339422 5.1:+34307144 None:intergenic
AACAGGAGGGGTAAAGCCTT+TGG 0.340643 5.1:-34304833 MS.gene071078:CDS
AACTGCAGGACCTGCGGATA+TGG 0.341254 5.1:-34304939 MS.gene071078:CDS
GGAATTAGATACTTCAAATA+AGG 0.346451 5.1:-34311107 MS.gene071078:CDS
GACAGATCCTACTGCAGCTT+TGG 0.348406 5.1:-34306536 MS.gene071078:CDS
TCCTTGCTGTAATTCTTTGA+TGG 0.352788 5.1:-34304615 MS.gene071078:CDS
TGGGCATGTGCCATGGCTTC+CGG 0.356360 5.1:-34305566 MS.gene071078:CDS
CTCTGCATCATCAGTGGACT+CGG 0.358178 5.1:+34305828 None:intergenic
GTATGGGGAATTGTTGAGAT+TGG 0.358295 5.1:+34304542 None:intergenic
CAGTAGTTCTTCTGGCGTTC+AGG 0.358413 5.1:-34304705 MS.gene071078:CDS
AGGCATAGTTAGTAGGTGTT+TGG 0.363279 5.1:-34305251 MS.gene071078:CDS
TGTTTAGAGTTTATAAAGAA+TGG 0.364320 5.1:-34306192 MS.gene071078:CDS
CAAGATGATGTATTTGTTGC+TGG 0.368171 5.1:-34307078 MS.gene071078:CDS
GGAAAAGGTCTTGGCTCGTT+TGG 0.370292 5.1:-34306226 MS.gene071078:intron
AAATAAATTTGGAAGTCTTC+CGG 0.371881 5.1:+34305879 None:intergenic
CCACTGATGATGCAGAGTTC+TGG 0.374506 5.1:-34305822 MS.gene071078:CDS
TGGAGGGTCTGCATTCGATA+TGG 0.374998 5.1:-34306048 MS.gene071078:CDS
AGGCCAACACCACAGAATTA+TGG 0.377404 5.1:+34307429 None:intergenic
AATCAGATCACCATAAGATA+TGG 0.380613 5.1:+34304109 None:intergenic
ACAGTTATGGAGAAACAAAA+TGG 0.382222 5.1:-34312883 None:intergenic
GGGTTTCTGATGCCCTTGAC+AGG 0.383187 5.1:-34302848 MS.gene071078:CDS
AGGCTTTACCCCTCCTGTTA+AGG 0.383656 5.1:+34304837 None:intergenic
TCCAAAAGCTGATGCGCGTT+TGG 0.384736 5.1:-34304678 MS.gene071078:CDS
AGCAGACCAGATATTTCTCT+TGG 0.387017 5.1:-34307204 MS.gene071078:CDS
TCCAGGCGTGGGAGTTGGAT+GGG 0.388368 5.1:-34305131 MS.gene071078:CDS
TAGATGTTGATTGCTTGTTA+TGG 0.388706 5.1:+34302016 None:intergenic
AGAAGCCAAGGCTGATATAA+TGG 0.391285 5.1:-34310900 MS.gene071078:CDS
ATTGACGACTGGCTGAAGTT+AGG 0.393973 5.1:-34306123 MS.gene071078:CDS
GTTCTTGAAAAGGTGACATT+GGG 0.396554 5.1:-34305616 MS.gene071078:CDS
AATGCCAGTTCCTTGAAAAC+TGG 0.399074 5.1:+34304406 None:intergenic
AACAAAGAAAAGTCCACATT+TGG 0.399535 5.1:+34304448 None:intergenic
CATACTTCAACTTCTTTACC+TGG 0.399890 5.1:+34301890 None:intergenic
TGAAAATCGTAACTCTCTAA+TGG 0.400793 5.1:+34310595 None:intergenic
GTGGATGGCAGTAGTTCTTC+TGG 0.401345 5.1:-34304713 MS.gene071078:CDS
AAAGGAACAACAGTGGGTTT+AGG 0.401496 5.1:+34312700 None:intergenic
AGATGTTGATTGCTTGTTAT+GGG 0.402328 5.1:+34302017 None:intergenic
CTCCAGGCGTGGGAGTTGGA+TGG 0.405828 5.1:-34305132 MS.gene071078:CDS
ACAGGAGGGGTAAAGCCTTT+GGG 0.406105 5.1:-34304832 MS.gene071078:CDS
ATTTCTCTTGGATTCCTTCA+AGG 0.406210 5.1:-34307192 MS.gene071078:CDS
TTATGGTGAGCTTCTTGATA+AGG 0.406775 5.1:-34304258 MS.gene071078:CDS
GGGAGAAAGAAGAATGAAAA+TGG 0.407207 5.1:-34311256 MS.gene071078:CDS
TCAACTCAAGTCCAATCTTT+GGG 0.407240 5.1:+34305536 None:intergenic
TCTGGTCTGCTCCTGAAAAC+CGG 0.408671 5.1:+34307216 None:intergenic
CCCCATCCAACTCCCACGCC+TGG 0.409368 5.1:+34305130 None:intergenic
CTTCTCCATTATATCAGCCT+TGG 0.410924 5.1:+34310895 None:intergenic
GGATGGGGTGCCCATGGTGG+AGG 0.412884 5.1:-34305115 MS.gene071078:CDS
TAACCTCCTTTACTATTAAG+TGG 0.413251 5.1:+34311493 None:intergenic
TTCATCACCAGAATCTCTTC+CGG 0.413316 5.1:+34305468 None:intergenic
GGTTGGTTCCATTGTTGAAA+AGG 0.413995 5.1:-34312773 MS.gene071078:CDS
AGAAGTTATTGCTGCGCAAC+AGG 0.414693 5.1:-34302746 MS.gene071078:CDS
CAACGGGTTAACACTGCATT+GGG 0.415007 5.1:-34304971 MS.gene071078:CDS
TTGACGACTGGCTGAAGTTA+GGG 0.419363 5.1:-34306122 MS.gene071078:CDS
ATCAGCGTACAGGAAGCTAA+TGG 0.419399 5.1:-34305586 MS.gene071078:CDS
GGAAATACTGGAACAAGATC+AGG 0.420556 5.1:-34304312 MS.gene071078:CDS
GTTGGATGGGGTGCCCATGG+TGG 0.423434 5.1:-34305118 MS.gene071078:CDS
CTATACTGATTGCCATAGTA+AGG 0.424241 5.1:-34306498 MS.gene071078:CDS
CTAAAATTGATAACCTGATA+AGG 0.424247 5.1:-34305348 MS.gene071078:CDS
TGACATCTCCCATACTATAA+TGG 0.425339 5.1:-34310720 MS.gene071078:CDS
TCAAGCTATGGCCCGACTAC+AGG 0.426747 5.1:-34311277 MS.gene071078:CDS
TTCTTCTTTCTCCCTGTAGT+CGG 0.427382 5.1:+34311265 None:intergenic
TGAAGGTGAATGCCTTACTA+TGG 0.428516 5.1:+34306486 None:intergenic
CGATGACGAGCAACAGGAAA+AGG 0.428720 5.1:+34312682 None:intergenic
CTGGATGATAAGAATGTTAG+TGG 0.432866 5.1:-34310677 MS.gene071078:CDS
AAAATCTGTAAAACTCTTGA+AGG 0.434792 5.1:-34306371 MS.gene071078:intron
CTTAGGGAAGGATTTGGAAA+AGG 0.434939 5.1:-34311305 MS.gene071078:CDS
AGCATTAGACAGTGTATTCC+AGG 0.435195 5.1:+34304025 None:intergenic
TGAGAACGATGACGAGCAAC+AGG 0.436872 5.1:+34312676 None:intergenic
ATGCAGTCCATTGAAATATT+CGG 0.438853 5.1:-34305169 MS.gene071078:CDS
ATATAAATTGTTCGAGGGAC+AGG 0.438941 5.1:-34305728 MS.gene071078:CDS
TAATTCTTTGATGGTAGAAT+GGG 0.439022 5.1:-34304606 MS.gene071078:CDS
GCAGGATAATGAAGAGATCT+TGG 0.439515 5.1:-34302889 MS.gene071078:intron
GGAGTAGATGGTTATCTGTA+AGG 0.440979 5.1:-34304751 MS.gene071078:CDS
GTAATTCTTTGATGGTAGAA+TGG 0.442924 5.1:-34304607 MS.gene071078:CDS
TCGACAGAACTTACCACTTC+CGG 0.443798 5.1:-34304582 MS.gene071078:CDS
TCTTCTTTCTCCCTGTAGTC+GGG 0.444634 5.1:+34311266 None:intergenic
CCAGCTCCAGGCGTGGGAGT+TGG 0.445150 5.1:-34305136 MS.gene071078:CDS
TTGAGAACTGAGGGAGATCC+TGG 0.452728 5.1:-34308936 MS.gene071078:CDS
AATCTAGCATCTGTTTGAAC+AGG 0.453713 5.1:+34305070 None:intergenic
GACAATGATACACGCTGAAT+AGG 0.453951 5.1:+34304377 None:intergenic
GATTATTCCATTTAGACAAC+AGG 0.455293 5.1:+34305381 None:intergenic
TCTCGGCAACTCCTTTGCTA+TGG 0.457116 5.1:-34305672 MS.gene071078:CDS
GTTGCCTCTGTGACAAAATC+CGG 0.458610 5.1:-34305487 MS.gene071078:CDS
AATGACCTTCACCATGCAAC+GGG 0.461378 5.1:-34304987 MS.gene071078:CDS
CAGATTGCATTTCAGTTGGT+TGG 0.463205 5.1:-34312790 MS.gene071078:intron
AAGATGATAAATCTTTCTTA+GGG 0.465077 5.1:-34311321 MS.gene071078:CDS
TTCTGGTCTTGGAGCTATGT+TGG 0.465540 5.1:-34305805 MS.gene071078:CDS
CTGATAAGGTCTGCCAAGAC+TGG 0.468230 5.1:-34305334 MS.gene071078:CDS
CTGGTCTGCTCCTGAAAACC+GGG 0.468847 5.1:+34307217 None:intergenic
AGGTAAAAGTGGACCGGAAG+TGG 0.468918 5.1:+34304569 None:intergenic
GTTCTATTCGACTTGCCACC+TGG 0.470719 5.1:-34304043 MS.gene071078:CDS
ATGGTGGTGCCATTATAGTA+TGG 0.473438 5.1:+34310711 None:intergenic
TTCCTTTGTCCATTGACGAC+TGG 0.474001 5.1:-34306134 MS.gene071078:CDS
GGAGTTGGATGGGGTGCCCA+TGG 0.475124 5.1:-34305121 MS.gene071078:CDS
GTAGTAGCTCATGGAATGCT+TGG 0.475398 5.1:-34310634 MS.gene071078:CDS
CCTTTCATCCGTTCTTGACA+AGG 0.476901 5.1:-34308701 MS.gene071078:CDS
GTTGGTTCCATTGTTGAAAA+GGG 0.477139 5.1:-34312772 MS.gene071078:CDS
GTTTAGAGTTTATAAAGAAT+GGG 0.477311 5.1:-34306191 MS.gene071078:CDS
CCAGGCGTGGGAGTTGGATG+GGG 0.477670 5.1:-34305130 MS.gene071078:CDS
CCAACTCCCACGCCTGGAGC+TGG 0.477679 5.1:+34305136 None:intergenic
TAACTTCAGCCAGTCGTCAA+TGG 0.478921 5.1:+34306125 None:intergenic
TTCGCACTTCAGCACTGCAT+TGG 0.481328 5.1:+34306459 None:intergenic
GTTGCTCGTCATCGTTCTCA+TGG 0.482920 5.1:-34312673 MS.gene071078:CDS
TACTGGAACAAGATCAGGGC+AGG 0.485197 5.1:-34304307 MS.gene071078:CDS
CTCGGCAACTCCTTTGCTAT+GGG 0.487230 5.1:-34305671 MS.gene071078:CDS
ACTGATTCATTTGCGGCAGA+AGG 0.488476 5.1:-34305431 MS.gene071078:CDS
GAGGGAGATCCTGGTGCAGC+TGG 0.489278 5.1:-34308927 MS.gene071078:CDS
CAAAGATATTTGCACAGCCC+CGG 0.491928 5.1:-34307235 MS.gene071078:CDS
AGGAATCCAAGAGAAATATC+TGG 0.493475 5.1:+34307198 None:intergenic
TTTCTCTTGGATTCCTTCAA+GGG 0.494686 5.1:-34307191 MS.gene071078:CDS
ACTGAACAGGAGCCTGTGTA+TGG 0.495114 5.1:-34310551 MS.gene071078:intron
AAGAGAGCTGGTTAGAGTCC+AGG 0.495196 5.1:-34301960 MS.gene071078:CDS
GGAGGACCAGCTCCAGGCGT+GGG 0.496549 5.1:-34305142 MS.gene071078:CDS
GGCAGAGGAGGACCAGCTCC+AGG 0.497407 5.1:-34305148 MS.gene071078:CDS
AGGACCAGCACGCTTAGTAT+GGG 0.497566 5.1:+34304526 None:intergenic
TTGTTCGAGGGACAGGAAGA+AGG 0.498543 5.1:-34305721 MS.gene071078:CDS
CAGAGCTCGCGTTATCACTT+AGG 0.499359 5.1:-34308567 MS.gene071078:intron
GGATGTTGTCGATACTGAAC+AGG 0.499540 5.1:-34310564 MS.gene071078:CDS
AGTTCTTGAAAAGGTGACAT+TGG 0.499894 5.1:-34305617 MS.gene071078:CDS
GCCACTTCAAGCAAATTAGC+GGG 0.500539 5.1:+34304470 None:intergenic
ATCTAACATGGATGAGCAGC+TGG 0.500890 5.1:-34301998 MS.gene071078:CDS
TGATAAATCTTTCTTAGGGA+AGG 0.501849 5.1:-34311317 MS.gene071078:CDS
GCAACGGGTTAACACTGCAT+TGG 0.502868 5.1:-34304972 MS.gene071078:CDS
TCCTCTGCCGAATATTTCAA+TGG 0.504326 5.1:+34305162 None:intergenic
TTATCTGTCAATTTCCATGT+TGG 0.504555 5.1:-34304338 MS.gene071078:CDS
ATGATGCAGAGTTCTGGTCT+TGG 0.506347 5.1:-34305816 MS.gene071078:CDS
AAGTCGACAAATCAGATGAC+TGG 0.507723 5.1:-34308624 MS.gene071078:CDS
TCAGCGTACAGGAAGCTAAT+GGG 0.508506 5.1:-34305585 MS.gene071078:CDS
TACGGCCGGTCTAGTTCGCA+TGG 0.508939 5.1:-34307046 MS.gene071078:CDS
TCCCGCTAATTTGCTTGAAG+TGG 0.510230 5.1:-34304471 MS.gene071078:CDS
TTGGGATTATGTTTAACTGC+AGG 0.510373 5.1:-34304953 MS.gene071078:CDS
CTTGACAGGGCTGAGATTCG+AGG 0.511853 5.1:-34302834 MS.gene071078:CDS
GGAGGCTTATGCTAAGTCAT+GGG 0.511995 5.1:-34302868 MS.gene071078:CDS
AATGCAAGGGCTCTTTGTCC+AGG 0.513100 5.1:+34308730 None:intergenic
CGAATCTACTTGCATATCTA+GGG 0.514208 5.1:-34305929 MS.gene071078:CDS
CTAAGTGATAACGCGAGCTC+TGG 0.515899 5.1:+34308568 None:intergenic
TTTCACTTTAAGAGATCTCT+CGG 0.516627 5.1:-34305689 MS.gene071078:CDS
TATATTTGTAAAGACAGAAC+TGG 0.521517 5.1:-34308670 MS.gene071078:CDS
CTCAATCAATACTTTCATCC+TGG 0.521759 5.1:+34301942 None:intergenic
TATCAATTCAGCCACTTCCA+TGG 0.521928 5.1:-34311128 MS.gene071078:CDS
TGAAGGAACTGATTCATTTG+CGG 0.522171 5.1:-34305438 MS.gene071078:CDS
TGTCAATTTCCATGTTGGAA+TGG 0.523442 5.1:-34304333 MS.gene071078:CDS
AGGAAAAGAGTAGTCAGTAG+TGG 0.524509 5.1:+34312720 None:intergenic
GTCTACTGCATAAAGAGAGC+TGG 0.527283 5.1:-34301972 MS.gene071078:CDS
CTCGAATCTCAGCCCTGTCA+AGG 0.528934 5.1:+34302835 None:intergenic
TAGACTTTGTTCTGTGCCTG+TGG 0.529478 5.1:+34305300 None:intergenic
ATTGCTTGTTATGGGAAATG+AGG 0.531440 5.1:+34302025 None:intergenic
TGTTCGAGGGACAGGAAGAA+GGG 0.532188 5.1:-34305720 MS.gene071078:CDS
TGGAGGCTTATGCTAAGTCA+TGG 0.533336 5.1:-34302869 MS.gene071078:CDS
GGTTTCTGATGCCCTTGACA+GGG 0.533459 5.1:-34302847 MS.gene071078:CDS
GAACAAAGTCTATCGAAAGA+AGG 0.535260 5.1:-34305289 MS.gene071078:CDS
ACGGCCGGTCTAGTTCGCAT+GGG 0.536507 5.1:-34307045 MS.gene071078:CDS
GAAAAGGATGTATCAAGCTA+TGG 0.537866 5.1:-34311289 MS.gene071078:CDS
CAAGCTATGGCCCGACTACA+GGG 0.539489 5.1:-34311276 MS.gene071078:CDS
AGTATCTAATTCCATGGAAG+TGG 0.539663 5.1:+34311117 None:intergenic
GCTGTTTGGACTTATGCACT+TGG 0.539907 5.1:-34308598 MS.gene071078:CDS
CCATGAGCTACTACTTGTAG+TGG 0.540009 5.1:+34310643 None:intergenic
CTGATTCATTTGCGGCAGAA+GGG 0.540114 5.1:-34305430 MS.gene071078:CDS
CTCTCTTGAGAGATTATGCT+GGG 0.540530 5.1:-34302713 MS.gene071078:CDS
TATCCCCATGCGAACTAGAC+CGG 0.540559 5.1:+34307041 None:intergenic
AGGAGGACCAGCTCCAGGCG+TGG 0.542309 5.1:-34305143 MS.gene071078:CDS
GTACAAAGGAAGAAAACAAA+GGG 0.544742 5.1:-34311376 MS.gene071078:CDS
TGTGGTGTTGGCCTGTGCAA+AGG 0.544784 5.1:-34307420 MS.gene071078:CDS
CCACTACAAGTAGTAGCTCA+TGG 0.546440 5.1:-34310643 MS.gene071078:CDS
TTATACAATTAAAGAAGCAC+TGG 0.546586 5.1:-34308904 MS.gene071078:CDS
TGGTTGACTTAGCCATAAAG+TGG 0.546730 5.1:-34305777 MS.gene071078:CDS
GGCCACTTCAAGCAAATTAG+CGG 0.546731 5.1:+34304469 None:intergenic
GGTACTTCAATGCCATGACT+TGG 0.547235 5.1:-34306170 MS.gene071078:CDS
TTGATATAAGTTCCAAGTCA+TGG 0.548827 5.1:+34306158 None:intergenic
ATTTGAAGTATCTAATTCCA+TGG 0.549759 5.1:+34311111 None:intergenic
CGCAGCAATAACTTCTCCAC+AGG 0.556714 5.1:+34302753 None:intergenic
GGGACAAATTCCGGAAGCCA+TGG 0.556982 5.1:+34305556 None:intergenic
TGGCGTCCACTTAATAGTAA+AGG 0.557100 5.1:-34311499 MS.gene071078:CDS
ACAAGTATTAAATATGAATG+AGG 0.557768 5.1:+34302776 None:intergenic
GAAAAGGGTATCGATGATAG+TGG 0.557905 5.1:-34312757 MS.gene071078:CDS
TGGAAGAAAACTGCTCTACA+AGG 0.558547 5.1:+34304129 None:intergenic
TTGAGGAAGGCATAGTTAGT+AGG 0.559798 5.1:-34305258 MS.gene071078:CDS
ATTGTATAACCAGCTGCACC+AGG 0.560392 5.1:+34308918 None:intergenic
TGATTCATTTGCGGCAGAAG+GGG 0.561037 5.1:-34305429 MS.gene071078:CDS
GGGACTACAAATGCCAGTCT+TGG 0.561293 5.1:+34305321 None:intergenic
GTTAACCCGTTGCATGGTGA+AGG 0.561317 5.1:+34304982 None:intergenic
ATTGTGCAAAGATTTACTGT+TGG 0.561606 5.1:-34306421 MS.gene071078:CDS
CGACCAAAATCCTCCACCAT+GGG 0.561674 5.1:+34305105 None:intergenic
CAAGCAATCAACATCTAACA+TGG 0.561806 5.1:-34302010 MS.gene071078:CDS
CATATTTAATACTTGTCCTG+TGG 0.561973 5.1:-34302769 MS.gene071078:CDS
TCCAAAAGATAACGAAGTCT+AGG 0.563174 5.1:+34307015 None:intergenic
TCTCTCTTGAGAGATTATGC+TGG 0.563751 5.1:-34302714 MS.gene071078:CDS
AAGGGTGAAGTCTAAAACCG+TGG 0.564712 5.1:-34304732 MS.gene071078:CDS
CTGAACAATTGCGTTTCTGG+AGG 0.565644 5.1:-34306065 MS.gene071078:CDS
TTGGAGCTATGTTGGTCCGA+TGG 0.567378 5.1:-34305797 MS.gene071078:CDS
ATGAAAGGAGATGCAATGCA+AGG 0.567620 5.1:+34308716 None:intergenic
GTGAGCTTCTTGATAAGGAG+AGG 0.568408 5.1:-34304253 MS.gene071078:CDS
TGAACAATTGCGTTTCTGGA+GGG 0.569234 5.1:-34306064 MS.gene071078:CDS
AGATTGGACTAAGGTAAAAG+TGG 0.570286 5.1:+34304558 None:intergenic
CCAGTATTTCCATTCCAACA+TGG 0.570341 5.1:+34304324 None:intergenic
AGAAGTATATAAATTGTTCG+AGG 0.572375 5.1:-34305734 MS.gene071078:CDS
CCACAGTTAGTTAAATCAGA+TGG 0.575059 5.1:-34311157 MS.gene071078:CDS
CCATCTGATTTAACTAACTG+TGG 0.575167 5.1:+34311157 None:intergenic
GTCTTCATATTGCCACCCAA+AGG 0.575864 5.1:+34304817 None:intergenic
GAATTGTTGAGATTGGACTA+AGG 0.576275 5.1:+34304549 None:intergenic
AAGCTAATGGGCATGTGCCA+TGG 0.576661 5.1:-34305573 MS.gene071078:CDS
CAATAGTTTAAAATCATACG+TGG 0.576831 5.1:-34310813 MS.gene071078:CDS
TCTATAACAACCATATCCGC+AGG 0.577442 5.1:+34304929 None:intergenic
CCTTGTCAAGAACGGATGAA+AGG 0.578081 5.1:+34308701 None:intergenic
AGCTAAACATTTGCCGACAG+AGG 0.579059 5.1:-34310744 MS.gene071078:CDS
CGTGACTATTTGAGAACTGA+GGG 0.579797 5.1:-34308945 MS.gene071078:CDS
GATAACGCGAGCTCTGGTTG+AGG 0.582160 5.1:+34308574 None:intergenic
TTCAGCGTGTATCATTGTCA+TGG 0.582946 5.1:-34304373 MS.gene071078:CDS
TCCATTGAAATATTCGGCAG+AGG 0.583035 5.1:-34305163 MS.gene071078:CDS
ATTCCCCATACTAAGCGTGC+TGG 0.583462 5.1:-34304530 MS.gene071078:CDS
CTTTACCTGGGTCAGAAGAG+AGG 0.584177 5.1:+34301903 None:intergenic
TGAGGAGATTGAAGAAGCCA+AGG 0.585235 5.1:-34310912 MS.gene071078:CDS
TATGATCATGATAATGATGA+TGG 0.586230 5.1:-34311472 MS.gene071078:CDS
TCGAATCTCAGCCCTGTCAA+GGG 0.586728 5.1:+34302836 None:intergenic
TTCTCTTGGATTCCTTCAAG+GGG 0.587063 5.1:-34307190 MS.gene071078:CDS
CAACAAGTTCAGAGTACTCA+AGG 0.588422 5.1:-34310767 MS.gene071078:CDS
GAATATCAGATTTGAACCTC+AGG 0.589099 5.1:+34304180 None:intergenic
AGATTGAACAACCTTTGCAC+AGG 0.589782 5.1:+34307409 None:intergenic
GGATAATGAAGAGATCTTGG+AGG 0.590806 5.1:-34302886 MS.gene071078:CDS
ATATGAATGAGGAAAGGTGA+TGG 0.591285 5.1:+34302787 None:intergenic
TGCAGTACTTTCAATAACGC+AGG 0.592996 5.1:+34310866 None:intergenic
AGCACTGCATTGGCACATGA+AGG 0.594722 5.1:+34306469 None:intergenic
AAATGGCGAAGCGAAGAAGA+AGG 0.595590 5.1:-34312866 MS.gene071078:intron
CAGTTAGTTAAATCAGATGG+TGG 0.595970 5.1:-34311154 MS.gene071078:CDS
CCTTTGTACTGGATTAGCAA+AGG 0.597313 5.1:+34311390 None:intergenic
CGTCCACTTAATAGTAAAGG+AGG 0.597662 5.1:-34311496 MS.gene071078:CDS
TAACCATAATTCTGTGGTGT+TGG 0.597688 5.1:-34307432 MS.gene071078:CDS
CATGCTTGTATACTTTCACA+AGG 0.598841 5.1:+34301852 None:intergenic
CATTCTTCCAAAGCTGCAGT+AGG 0.599386 5.1:+34306529 None:intergenic
GAGTAGATGGTTATCTGTAA+GGG 0.599414 5.1:-34304750 MS.gene071078:CDS
GTGAAGTCTAAAACCGTGGA+TGG 0.600356 5.1:-34304728 MS.gene071078:CDS
GAAGGAAAAGTGCTTGAGGA+AGG 0.600700 5.1:-34305271 MS.gene071078:CDS
CAGGATGAAAGTATTGATTG+AGG 0.600967 5.1:-34301941 MS.gene071078:CDS
CCAGAACTCTGCATCATCAG+TGG 0.601604 5.1:+34305822 None:intergenic
TTGATTCTGAGAATCGAGCT+CGG 0.601946 5.1:-34310952 MS.gene071078:CDS
GGACTAAGGTAAAAGTGGAC+CGG 0.602725 5.1:+34304563 None:intergenic
ATGTTTAACTGCAGGACCTG+CGG 0.602985 5.1:-34304945 MS.gene071078:CDS
ACTGGCATTTGTAGTCCCAC+AGG 0.603035 5.1:-34305316 MS.gene071078:CDS
TCTGCATCATCAGTGGACTC+GGG 0.603374 5.1:+34305829 None:intergenic
ATACTTCAACTTCTTTACCT+GGG 0.603524 5.1:+34301891 None:intergenic
AAATGACCTTCACCATGCAA+CGG 0.604296 5.1:-34304988 MS.gene071078:CDS
ACACAAGGCAGGGAATATCT+GGG 0.607417 5.1:+34306005 None:intergenic
GATACACGCTGAATAGGAGA+AGG 0.608458 5.1:+34304383 None:intergenic
GATTCATTTGCGGCAGAAGG+GGG 0.609850 5.1:-34305428 MS.gene071078:CDS
TTGCTTGAAGTGGCCAAATG+TGG 0.609884 5.1:-34304461 MS.gene071078:CDS
ACAGGAAAAGGAACAACAGT+GGG 0.610037 5.1:+34312694 None:intergenic
GGTTGTTATAGAGAAGACAT+TGG 0.610631 5.1:-34304918 MS.gene071078:CDS
GAAGTATATAAATTGTTCGA+GGG 0.612831 5.1:-34305733 MS.gene071078:CDS
GCATAGTGCCTTGTCAAGAA+CGG 0.613219 5.1:+34308693 None:intergenic
ATTGAAATATTCGGCAGAGG+AGG 0.613642 5.1:-34305160 MS.gene071078:CDS
AGACTTTGTTCTGTGCCTGT+GGG 0.613922 5.1:+34305301 None:intergenic
GTATTGATTGAGGCATGTGA+GGG 0.614312 5.1:-34301931 MS.gene071078:CDS
AGTATTGATTGAGGCATGTG+AGG 0.619879 5.1:-34301932 MS.gene071078:CDS
GAAATACTGGAACAAGATCA+GGG 0.619937 5.1:-34304311 MS.gene071078:CDS
AACATGGATGAGCAGCTGGA+TGG 0.620963 5.1:-34301994 MS.gene071078:CDS
AAATTCCTCTCTTCTGACCC+AGG 0.621750 5.1:-34301908 MS.gene071078:CDS
AATTACGAATACAGAGGTCA+AGG 0.622108 5.1:+34304864 None:intergenic
GAAAGAAGGAAAAGTGCTTG+AGG 0.622242 5.1:-34305275 MS.gene071078:CDS
AGTACAAAGGAAGAAAACAA+AGG 0.622301 5.1:-34311377 MS.gene071078:CDS
TGCTTGGAGCAATAGAGTTG+AGG 0.622639 5.1:-34310618 MS.gene071078:CDS
AGGATATCTTGAACCTGCAG+AGG 0.622979 5.1:-34303952 MS.gene071078:intron
AGTCGACAAATCAGATGACT+GGG 0.623530 5.1:-34308623 MS.gene071078:CDS
TGGGAGATGTCATCCTCTGT+CGG 0.627099 5.1:+34310731 None:intergenic
TGAAAGGAGATGCAATGCAA+GGG 0.627860 5.1:+34308717 None:intergenic
TCGACCAAAATCCTCCACCA+TGG 0.628293 5.1:+34305104 None:intergenic
TGCAGTGTTAACCCGTTGCA+TGG 0.631503 5.1:+34304976 None:intergenic
TTCTTGAAAAGGTGACATTG+GGG 0.633084 5.1:-34305615 MS.gene071078:CDS
TATTAAATATGAATGAGGAA+AGG 0.633205 5.1:+34302781 None:intergenic
TGGTGGTGCCATTATAGTAT+GGG 0.636700 5.1:+34310712 None:intergenic
ACGTGACTATTTGAGAACTG+AGG 0.637620 5.1:-34308946 MS.gene071078:CDS
AGAAGAACTACTGCCATCCA+CGG 0.639888 5.1:+34304715 None:intergenic
TGCTGGGAAGCAGCAACATG+AGG 0.643837 5.1:-34302697 MS.gene071078:intron
AAAAGCATATTGAGTTCCTG+AGG 0.644099 5.1:-34304196 MS.gene071078:CDS
TTTATGGCTAAGTCAACCAT+CGG 0.646290 5.1:+34305781 None:intergenic
ACTATGATCAGTCATTCTGT+CGG 0.648452 5.1:+34311036 None:intergenic
CGGCCGGTCTAGTTCGCATG+GGG 0.649062 5.1:-34307044 MS.gene071078:CDS
GGAGGGGTAAAGCCTTTGGG+TGG 0.654097 5.1:-34304829 MS.gene071078:CDS
ATCTACTTGCATATCTAGGG+AGG 0.655039 5.1:-34305926 MS.gene071078:CDS
CGACTGGCTGAAGTTAGGGA+AGG 0.656513 5.1:-34306118 MS.gene071078:CDS
ACGACTACATGCACTTCAGT+CGG 0.656863 5.1:-34304793 MS.gene071078:CDS
CCAGAAACGCAATTGTTCAG+TGG 0.658904 5.1:+34306068 None:intergenic
AGCCAGTCGTCAATGGACAA+AGG 0.660409 5.1:+34306132 None:intergenic
GGACCAGCACGCTTAGTATG+GGG 0.661425 5.1:+34304527 None:intergenic
GCTGCGTACACCCATAGCAA+AGG 0.664229 5.1:+34305661 None:intergenic
GATCCAGCAAATGTCAGCTG+AGG 0.664740 5.1:-34310930 MS.gene071078:CDS
ACCATCAAAGAATTACAGCA+AGG 0.665527 5.1:+34304614 None:intergenic
ACTGGAACAAGATCAGGGCA+GGG 0.666522 5.1:-34304306 MS.gene071078:CDS
ACTGGAACTTACTAGAAGTG+TGG 0.667477 5.1:-34308886 MS.gene071078:intron
GTTCGAGGGACAGGAAGAAG+GGG 0.667602 5.1:-34305719 MS.gene071078:CDS
TCTTGAAAAGGTGACATTGG+GGG 0.672618 5.1:-34305614 MS.gene071078:CDS
TCTCTTGGATTCCTTCAAGG+GGG 0.674862 5.1:-34307189 MS.gene071078:CDS
TGATGATAACCATAATTCTG+TGG 0.683140 5.1:-34307438 MS.gene071078:CDS
GGAGAAAATTACGAATACAG+AGG 0.683604 5.1:+34304858 None:intergenic
GGTACTTCAAAATAGAGACA+TGG 0.684530 5.1:+34304885 None:intergenic
AATGAAGTCATACCATACAC+AGG 0.684734 5.1:+34310539 None:intergenic
GAACTACTTTGATATCTCAG+AGG 0.697499 5.1:-34307363 MS.gene071078:intron
AGAAAGAAGAATGAAAATGG+CGG 0.698435 5.1:-34311253 MS.gene071078:CDS
CCTTTGCTAATCCAGTACAA+AGG 0.706090 5.1:-34311390 MS.gene071078:CDS
AACAGGAAAAGGAACAACAG+TGG 0.707969 5.1:+34312693 None:intergenic
TGGTCTGCTCCTGAAAACCG+GGG 0.709890 5.1:+34307218 None:intergenic
AATAGTTTAAAATCATACGT+GGG 0.715037 5.1:-34310812 MS.gene071078:CDS
CGACAAATCAGATGACTGGG+AGG 0.721755 5.1:-34308620 MS.gene071078:CDS
ATTAGACAGTGTATTCCAGG+TGG 0.731391 5.1:+34304028 None:intergenic
GAATAGAACTTTCAACACAG+CGG 0.821500 5.1:+34304057 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr5.1 gene 34301867 34312899 34301867 ID=MS.gene071078
chr5.1 mRNA 34301867 34312899 34301867 ID=MS.gene071078.t1;Parent=MS.gene071078
chr5.1 exon 34312867 34312899 34312867 ID=MS.gene071078.t1.exon1;Parent=MS.gene071078.t1
chr5.1 CDS 34312867 34312899 34312867 ID=cds.MS.gene071078.t1;Parent=MS.gene071078.t1
chr5.1 exon 34312669 34312797 34312669 ID=MS.gene071078.t1.exon2;Parent=MS.gene071078.t1
chr5.1 CDS 34312669 34312797 34312669 ID=cds.MS.gene071078.t1;Parent=MS.gene071078.t1
chr5.1 exon 34310552 34311524 34310552 ID=MS.gene071078.t1.exon3;Parent=MS.gene071078.t1
chr5.1 CDS 34310552 34311524 34310552 ID=cds.MS.gene071078.t1;Parent=MS.gene071078.t1
chr5.1 exon 34308887 34308981 34308887 ID=MS.gene071078.t1.exon4;Parent=MS.gene071078.t1
chr5.1 CDS 34308887 34308981 34308887 ID=cds.MS.gene071078.t1;Parent=MS.gene071078.t1
chr5.1 exon 34308568 34308755 34308568 ID=MS.gene071078.t1.exon5;Parent=MS.gene071078.t1
chr5.1 CDS 34308568 34308755 34308568 ID=cds.MS.gene071078.t1;Parent=MS.gene071078.t1
chr5.1 exon 34307364 34307469 34307364 ID=MS.gene071078.t1.exon6;Parent=MS.gene071078.t1
chr5.1 CDS 34307364 34307469 34307364 ID=cds.MS.gene071078.t1;Parent=MS.gene071078.t1
chr5.1 exon 34307014 34307274 34307014 ID=MS.gene071078.t1.exon7;Parent=MS.gene071078.t1
chr5.1 CDS 34307014 34307274 34307014 ID=cds.MS.gene071078.t1;Parent=MS.gene071078.t1
chr5.1 exon 34306372 34306557 34306372 ID=MS.gene071078.t1.exon8;Parent=MS.gene071078.t1
chr5.1 CDS 34306372 34306557 34306372 ID=cds.MS.gene071078.t1;Parent=MS.gene071078.t1
chr5.1 exon 34303953 34306241 34303953 ID=MS.gene071078.t1.exon9;Parent=MS.gene071078.t1
chr5.1 CDS 34303953 34306241 34303953 ID=cds.MS.gene071078.t1;Parent=MS.gene071078.t1
chr5.1 exon 34302698 34302907 34302698 ID=MS.gene071078.t1.exon10;Parent=MS.gene071078.t1
chr5.1 CDS 34302698 34302907 34302698 ID=cds.MS.gene071078.t1;Parent=MS.gene071078.t1
chr5.1 exon 34301867 34302061 34301867 ID=MS.gene071078.t1.exon11;Parent=MS.gene071078.t1
chr5.1 CDS 34301867 34302061 34301867 ID=cds.MS.gene071078.t1;Parent=MS.gene071078.t1
Gene Sequence

>MS.gene071078

ATGGAGAAACAAAATGGCGAAGCGAAGAAGAAGGTGAAGATTCTAAACACAAGCTCAATACAAATAAATCAACAACAACAACAACAACAGATTGCATTTCAGTTGGTTGGTTCCATTGTTGAAAAGGGTATCGATGATAGTGGCACGCAAAAGAAAACCACTACTGACTACTCTTTTCCTAAACCCACTGTTGTTCCTTTTCCTGTTGCTCGTCATCGTTCTCATGGTCCTGTAAGTAACCCCATCACCCTTTTTTCTTATAAAGTTTCAACCTGTTTTTATTTTCAGTAATGTAATAAAACAATTAGTTAATGACTTTGAGTCAAAAGGGTTGTTACAAAATAAAGAATTCATATTTGCCGACATGCTAGACACGACACTGACACGTAGGGACCTATGAATGAAGCACTGACACGAACACCAGACATACATATTGACACCGATAATTATTTGAAAAAAAATGACATAATCAATTGTAATCATGTGTCAGACACTGACACATGTTGGATACCGGACACACCTTTGATCATTGGCGGAGCTACATGCATCTCAGGGGATGCAGCTGAACCCCCTGGGTTCTTAAAATTACACCTACAAATCTTTCCAATTTCAACTTTGAATCCCCTGAAAATTTGAGTTTGCACCCTTATCTTAAAGATTGTTTCACTTCTGCACCTCTACTTTCTCTTTTTTACAGATTTGAATATTTGGTTGTATCTCTTTAGTTTTCGGGTCATGAATGTGTGTGAGACACTCTTATCATACTCTCTAAATGTATCGAAATTGCAGACACATCCTTAGTGCATATGTGTTTTTAGTAATTTTATAGATTAAATTGGACAATGACAAAACATATTCTAGAATAAAATTGATTGTCTAAAAATTAATTCGACGATTAAAATAACTAATAAAAGGGACATTTATGAATGTATTTGCAATTTTGATAAATTGAAAGATCAATATGGCGACAATATGCACATTCATGATAAAAATTTGAAAGTTCGAAAGTTTGAACCCCCTAACCCAAGGTTCTGGCAACGCCACTGCCTTTGATCATAAGTGTTGGTGCTGCAAAGTAGAGACCATGTAATAATTTATGAAAATAGAAGTGATTGAATGCGACTACTTGTGTTGGTGTTGAGTAAGTGTTGGACATTAGACACGTCTTCAATCTCCAGCAATTTCAACACACTCTAACACTATCTCCAGCAACCTCTTCATTATTGGAACCCTTGTGAATTTCAACCAATCACGAATATAACGTTGGAGAGATGTGTTGCTAACAATTGTTATTTAAGTTTATTGTTAATGTAGTCTGTCTGTGTAATGTGTAGTAAGCTCATGGACTGATACTTAGAATTTGCTGTTTTTACAGCATTGGCGTCCACTTAATAGTAAAGGAGGTTATGATCATGATAATGATGATGGTGACAATGATGTTGAAGATGAAGATGACACAGATTTTATGGGGTTTGAGAAAGCTGCTGCCTTTGCTAATCCAGTACAAAGGAAGAAAACAAAGGGTATTGATTTTGGGAAATGGAGAGAGTTTACTCAAGATGATAAATCTTTCTTAGGGAAGGATTTGGAAAAGGATGTATCAAGCTATGGCCCGACTACAGGGAGAAAGAAGAATGAAAATGGCGGTAAGAATACATCCAAGAAAATCTCATCTCATTCAGTTGATAGTGTTTTTGCTTCGATGGAAGTCGATGTGAAGCCACAGTTAGTTAAATCAGATGGTGGTTTTATCAATTCAGCCACTTCCATGGAATTAGATACTTCAAATAAGGATGACAAGAAAGAAAAAGAATTTGCAGCTGAACGAGACAAGATTTTTTCCGACAGAATGACTGATCATAGTTCCGCGTCTGAAAAAAACTACTTCATGCATGAACAAGAGTCGACGTCTCTTGAGAGTGAAATTGATTCTGAGAATCGAGCTCGGATCCAGCAAATGTCAGCTGAGGAGATTGAAGAAGCCAAGGCTGATATAATGGAGAAGATAAGTCCTGCGTTATTGAAAGTACTGCAAAAAAGAGGGAAGGAGAAATTGAAGAAACCCAATAGTTTAAAATCATACGTGGGTGCTGTCGCTGAATCTGTTAATCAACAAGTTCAGAGTACTCAAGGAGCTAAACATTTGCCGACAGAGGATGACATCTCCCATACTATAATGGCACCACCATCCAAAAAACAGCTGGATGATAAGAATGTTAGTGGAAAGACTTCAACCACTACAAGTAGTAGCTCATGGAATGCTTGGAGCAATAGAGTTGAGGCCATTAGAGAGTTACGATTTTCATTGGCTGGGGATGTTGTCGATACTGAACAGGAGCCTGTGTATGGTATGACTTCATTCATTCTTTTTAGGTTTCTTTGTCTAGCTTTTGAGTTCTAATGTCAAACTAATGCTATGTATGATCCTTGGATCTGTAACTGCATCACGATCTTAGTTGTGGCTAGATATATCTGTAACTTATGATTTATATCAATGATTGTGGTGGAACCACAGACACACGTTAGAACCTTCAACCTTGCATATATAGATTTAAAACCTTGTATATAGATATAAATATAGGATGTTCCTTGTTTTTTCTTTCAGGTATCTATTAAACAAATGCTCCGCTGGTGATAATATGCAATCTTAATTGTAGATATGGGCCCTTCTTATTTGGTATTTTGATCATGTGGGAAACTAATACACAGCTATTGATAATATGTATTTTTTAATGTTTGAATCCTTATCTTGATAAAACCATTTTTTCCCCAACTTACGCAGTTCAGTTTTTCCAACAATCTGTGGTCATTTTTTAATTGTCTACACTTTTAACTGCACATGAACTAAAAATAGTTGGCATTTCTGTGTGACCTTGAGAGGTTTAGATAAATGACTTTGCAAGGTCACAGGCTGTCTGTGAGCATCGAGTGAACTATGCCCCTATTAGAAATGGTGGTTGGGCCTAACACAACCTCACAAAACCGGCTTGTGAGGTGAGGATTGCCCCCACTTATAAACAAATTGTCAGGCCAACTCCTAACCGATGTGGGACTCTTAACACACCCCCTCACGCTCAGGATTGCACATCTGAAGCGTGAACATAAATGACGGGTGGCCCGATAACGGAAACCTGATAACAGGTGGCCCAAAGAATCGTGAAGAGGCTCTGATACCACCTGTTATCAGGTTTCCGTTATCGGGCCACCCGTCATTTATGTTCACGCTTCAGATGTGCAATCCTGAGCGTGAGGGGGTGTGTTAAGAGTCCCACATCGGTGAGGATTGCCCTCACTTATAAATAAACAAATTGTCAGGCCAACTCCTAACCGATGTGGGACTCTTAACACACCCCCTCACGCTCAGGATTGCACATCTGAAGCGTGAACATAAATGACGGGTGGCCCGATAACGGAAACCTGATAACAGGTGGCCCAAAGAATCGTGAAGAAGCTCTGATACCATATTAGAAATGGTGGTTGGGCCTAACACAACCCCACAAAACCGGCTTGTGAGGTGAGGATTGCCCCCACTTATAAACAAATTGTCAGGCCAACTCCTAACCGATGTGGGACTCTTAACAGCCCCCTTGTTATCTTTAGGCTAGAAGTTAGAATATTGGTTACGTCGCACTCTATACTATGGTTTCCTGGTGGTTTCCTTTGCTTTCTAATATTTCAAGTTCATAGTTCACATTGATTGGTTATTGTTCTATATACGTCATGTCAGATGTTAACATTTGCGGAAAAAAATGTTGGAGCTGTGAATATTAATTTTTGCATCCACAGATATACCTATTATTCTGTATTTTCTGTTAGGAATAATATCGGTCAGATGTTAGTGTGTCCTGAATATTATTAATTGGTATGCTGATTATTCTTGAAATTCTTTGTATGACAATTCTTCTTGCTATGATGCAGATAATATCGCTGAACGTGACTATTTGAGAACTGAGGGAGATCCTGGTGCAGCTGGTTATACAATTAAAGAAGCACTGGAACTTACTAGAAGTGTGGTATGTTACGTGATGTATTTTTTAGTTGGTTGCGATTGGGATGGATTCACAATTCTTGATGCAAAATAATAAATAAACTCTAATATTTTCCACTTAGTAACATATTTTCTGCAAAATGTTATTTTTTTTAGATTCCTGGACAAAGAGCCCTTGCATTGCATCTCCTTTCATCCGTTCTTGACAAGGCACTATGCTATATTTGTAAAGACAGAACTGGAAATATGACAAAAAAGGGGAACAAAGTCGACAAATCAGATGACTGGGAGGCTGTTTGGACTTATGCACTTGGTCCTCAACCAGAGCTCGCGTTATCACTTAGGTGATTTTTGCTTTATGCCTAAGTTGGTTTCATCATCTACTTTTAACAGTCGACTAAAATGCCTGTTTATATATATGTAGTGAAATTATTATTATTTTTTTTTTTTTTGAAAGAATGTAGTGAAATTATTATGATTCTGTTTCCTCCGTAGATTATACTTGTATGTGTGTGTGTGTATTCAAATATCCTTGTAAACATGAGTGAGAAGTATTCATGTTAAACTGGCTTAGAGCCCAAATTCTAAGTGCACCAAAGCAGCAGCATCCATCTTGACCTGTCCTGGGACTATTTTGTTCACAAGTCCATTCAAATCTGGAGCTTGAAATTGTTTCATTTGTTATTTTTTCCATTTTTATTAGCTGTCTCTCTTGTCATGATCCCTTCCGTCATCCTCTCTCTATATTGTATTCTCTCTTGCATATGTGTCTTTCACCTAACCGTTACATCCATTAGGTCTGGTATGTGTAGATTGGCTGGCTCCTGAAATCACCCCACCATCAAAGCCTATATGCAATGCCTCAAGTTTCCAATTTGATTTGTTTTCATATTTGATTAGAATTTAGAGTCTAGTATCAGTATGAATAAGGGACGGTATTTTGTCTTTTGTAACACATCATTACAAACCATATGTCAAATAAAAATTTCTAAATTTCTAATCATAGTTTGTTCTCTCTCTTCCTCTTATAATTTCAACAATTTCATTCTCTCCAGATGAATTCTTATGCACACAAGCTTTTGCTATCCGTGTCCAAAAGTCAAATTGGATGATTGAGAATCTAGATTGCGTACTTGATTCAAGCCTTTTGTTCTCATGCAGTAAATAACAAGGATACATGTTGGTGATCCTTGAAAGGACTTTTATTTGGCTACTGAATGCAAAATAATGTTATCCGAAATGATAACTCTCTATCTTGTCATTATGTATAAATTTTGCAATTAGATTGTACTGTTATGTTTTGATGCATTTGCTATCTGAGTAGCTTTGCCTTTTGATACATAGCCACTGATAAATACTTAGAATCTTTAGTTTTATTGGTATATAATTACATTTCCCATTATATGGGCTTCTTGTAATGGCCTTGTGCTCTGATTTTTCAGGATGTGTCTTGATGATAACCATAATTCTGTGGTGTTGGCCTGTGCAAAGGTTGTTCAATCTGCATTGAGTTGTGATGTGAATGAGAACTACTTTGATATCTCAGAGGTAAACATGGTTTATATATTTATAAATTTAATGTTATACTGTTATTCTGTGTTACGAATTATATTCATCTGTAATTCTTTTACCTCCAGAACATGGCAACTTGTGACAAAGATATTTGCACAGCCCCGGTTTTCAGGAGCAGACCAGATATTTCTCTTGGATTCCTTCAAGGGGGATACTGGAAGTACAGTGCAAAACCTTCTAACATTCAACCTTTTAGCGAGGATTCTATGGATAATGAGAGTGACGATAAACACACAATTCAAGATGATGTATTTGTTGCTGGACAAGATTTTACGGCCGGTCTAGTTCGCATGGGGATACTTCCTAGACTTCGTTATCTTTTGGAGGTAAAAAATAATTATTCATGATGAAACATTTCATATCATAAGATTTTTGTAGGACAATTAGAATTCGGGTTAGGTCTAACTTAATCCTAAAAGCTAGCTCAAGTGGTGAGGATTGTCCAAATTTTATAATAAAAACATTGATTTTATCTGTTGTTGATGTGTGATCTCAATTCACCCCGTCATGCTCAGGACTAGACATCTGAAGTGTGGACAAATGCAAGATCCCCAATAGCAGATCTAAAACAGACTCTTATACTATCTTAGATATTTGCCTAGGCTTAACATAAACCTGAAAGGTAGTTCAGTGGGTGAGGATTGCCTCAATTTCATTAGGAAAATGTTGTCCATATCAGTAGTTGATGTGGGATCTCAACCAAGATATAAGCACTAAGGTTTAGTTTCTGCTTTAGAGTCTGTAAACTTCAATGTCAAACTCATTATTTCCTATGGTTGCAGACAGATCCTACTGCAGCTTTGGAAGAATGTATTGTTTCTATACTGATTGCCATAGTAAGGCATTCACCTTCATGTGCCAATGCAGTGCTGAAGTGCGAAAGACTTATTCAGACAATTGTGCAAAGATTTACTGTTGGCAATTATGAAATTCGATCTTCCATGATAAAATCTGTAAAACTCTTGAAGGTGAGTGATAATTTAATTCCATTTTATTGATTGCTTCATATATGGATCATTTCCTTGTTATGTTTGTTAAATTATTTTTGCATTTGCAGTTAGAGAATCATCACTAATGTTTCATTTGATTTTGGAAAAGGTCTTGGCTCGTTTGGACCGCAAAACTTGTTTAGAGTTTATAAAGAATGGGTACTTCAATGCCATGACTTGGAACTTATATCAACTTCCTTTGTCCATTGACGACTGGCTGAAGTTAGGGAAGGAAAAATGTAAACTCAAGTCTGCACTGACCACTGAACAATTGCGTTTCTGGAGGGTCTGCATTCGATATGGTTATTGTGTGTCTCACTTCTCCCAGATATTCCCTGCCTTGTGTTTTTGGTTGGATCTTCCTTCATTTGAAAAACTTACAAAAAACAATGTTCTGAACGAATCTACTTGCATATCTAGGGAGGCATATCTTGTTTTGGAGTCTTTGGCCGGAAGACTTCCAAATTTATTTTCGCAACAGTGTCTAACAAATCAACATCCCGAGTCCACTGATGATGCAGAGTTCTGGTCTTGGAGCTATGTTGGTCCGATGGTTGACTTAGCCATAAAGTGGATTGCAACAAGAAGTGATCCAGAAGTATATAAATTGTTCGAGGGACAGGAAGAAGGGGTGAATCATTTCACTTTAAGAGATCTCTCGGCAACTCCTTTGCTATGGGTGTACGCAGCTGTGACTCACATGCTTTTCAGAGTTCTTGAAAAGGTGACATTGGGGGATGCTATCAGCGTACAGGAAGCTAATGGGCATGTGCCATGGCTTCCGGAATTTGTCCCAAAGATTGGACTTGAGTTGATCAATTATTGGCATTTGGGCTTTTCAGTTGCCTCTGTGACAAAATCCGGAAGAGATTCTGGTGATGAATCTTTTATGAAGGAACTGATTCATTTGCGGCAGAAGGGGGATGTTGAAATGTCATTGGCATCAACCTGTTGTCTAAATGGAATAATCAATGTTATTACTAAAATTGATAACCTGATAAGGTCTGCCAAGACTGGCATTTGTAGTCCCACAGGCACAGAACAAAGTCTATCGAAAGAAGGAAAAGTGCTTGAGGAAGGCATAGTTAGTAGGTGTTTGGTTGAATTAAGGTCTATGCTTGATGTTTTCACGTTTTCAGCTTCTTCAGGGTGGCAGCGAATGCAGTCCATTGAAATATTCGGCAGAGGAGGACCAGCTCCAGGCGTGGGAGTTGGATGGGGTGCCCATGGTGGAGGATTTTGGTCGAAAACAGTTTTACCTGTTCAAACAGATGCTAGATTGCTCGTCCGCTTGCTGCAAATTTTTGAAAATGCATCTAATGATGCTCCCGAAACTGAACAAATGACCTTCACCATGCAACGGGTTAACACTGCATTGGGATTATGTTTAACTGCAGGACCTGCGGATATGGTTGTTATAGAGAAGACATTGGATCTATTGTTCCATGTCTCTATTTTGAAGTACCTTGACCTCTGTATTCGTAATTTTCTCCTTAACAGGAGGGGTAAAGCCTTTGGGTGGCAATATGAAGACGACGACTACATGCACTTCAGTCGGATGTTATCATCTCATTTCAGGAGTAGATGGTTATCTGTAAGGGTGAAGTCTAAAACCGTGGATGGCAGTAGTTCTTCTGGCGTTCAGGCCACTCCAAAAGCTGATGCGCGTTTGGATACGATATATGAAGACTCAGATATGTCTTCTACAACAAGTCCTTGCTGTAATTCTTTGATGGTAGAATGGGCTCGACAGAACTTACCACTTCCGGTCCACTTTTACCTTAGTCCAATCTCAACAATTCCCCATACTAAGCGTGCTGGTCCTCAAAAAGTTGGTAGTGTACATAACACACATGATCCCGCTAATTTGCTTGAAGTGGCCAAATGTGGACTTTTCTTTGTTTTAGGCATTGAAACAATGTCCAGTTTTCAAGGAACTGGCATTCCTTCTCCTATTCAGCGTGTATCATTGTCATGGAAGTTACATTCATTATCTGTCAATTTCCATGTTGGAATGGAAATACTGGAACAAGATCAGGGCAGGGAAACATTTGAAGCTTTACAGGATCTTTATGGTGAGCTTCTTGATAAGGAGAGGTTTAAACAAAATAAAGAAGCTATTTCGGATGATAAAAAGCATATTGAGTTCCTGAGGTTCAAATCTGATATTCACGAAAGTTACTCGACATTTATTGAAGACCTTGTAGAGCAGTTTTCTTCCATATCTTATGGTGATCTGATTTTTGGTCGGCAAGTTTCAGTGTATTTACACCGCTGTGTTGAAAGTTCTATTCGACTTGCCACCTGGAATACACTGTCTAATGCTCGTGTTCTTGAACTTTTGCCACCTTTAGAGAAATGTTTTTCTGACGCTGAAGGATATCTTGAACCTGCAGAGGTAAAACAATTAATTCTCAGTTATTTTACTATGGAACATTGTCTGCATAGAATATATCTTATGCTTCTGATACCTGTTCTTTTTTTAAAATCGAAGATATAAATATCATTTGTATGTTGTTATGATTATAATTTATTGAAAATTTGCATTTAAAGTGTGGTTTAAAACATAAAACATCTGCTACAGAGTATAGTAGACTTTTTTTTTCTTGTATTGTAGCTAAAATCGGTAAAAGGAAAAAGTTGTTGGGTGAATTTTTTGAAGTCTTAAAAGAATTTTATATGCACATCTGGTATCTCAGTTAGATATAGCTGTTGGGGTAGTATTTAATAATGAACTTGATGAGTATTCTAAGGATGAGCAGAATAATGAAGATCTGGATGACGAAACAATCGTCAATGATTCATAGGCCCAACCACAAGTAGGGAAATATGGAAATTGTATTACACCAGAGGTTATAGCCTCTGTACCAGTGATCTCTAGATACCATGTTGAGAGAGAAATAAGTGGGTGACATATGTTGAATATTGTGTTTCAACTAACATAGGAGTATTACAGAATATGGGAGATATTATTCTCATTTACATAGTATGATACGATATGATACGCCTTTGCAATATTCCTAAACAATAAATACAAAGATCAGAATATATTTTCAAGAGTCTCTTTGCACCAAACACGCACATATCTATAGGATGTATCTTTTGTGACATGTTTTTTTGGAGTGAAGAATTCTAAGGCTGTATCTTTCGTTTTTTTTAAGTTCAACACTGACATGAAAGGCTTGTCAAGAAAGTTATCATACAAGGAATGTGAATTGCTCTGTTGTTTGTAACTCTTATTTTTCTTTTCTGTTAATGCTATCTGTAATTTCTTTTAGTAGCAACAATTGGAATCTAATGATTAGGTAGGTGGAACAATTTTCTTTTCACGTTAATATTCAAGAGGGGTCCACCAGCATAATTTAAACTGGCAGTGTATGCAAGTCATTCATTGGATATACTGCATTTCTATCAAACATTCATAACGTACTGTTCTGCTGCAGGATAATGAAGAGATCTTGGAGGCTTATGCTAAGTCATGGGTTTCTGATGCCCTTGACAGGGCTGAGATTCGAGGATCAGTTTCATATACTATGGCTGTCCATCACCTTTCCTCATTCATATTTAATACTTGTCCTGTGGAGAAGTTATTGCTGCGCAACAGGCTTGTTAGGTCTCTCTTGAGAGATTATGCTGGGAAGCAGCAACATGAGGTGAGCATGTTTTGAATGTTTTTTACCTGATGGATGGATGGATGTATGGTTACTTAGAGAAATTTCCATTGAAAATCTGTGCTGCCAAACACATATCAAGTAAATGTTGTGTGTTTGTGTGTATTTTCCATAGATGAAAGTGGAAGATAAGATTATGATGTATCATATTTGTCCTTTATTTAAGAGCTGTGCTATTTTGATACAAAATGAAACAATTTTTGATAATTTGTGCAGTTCAAGTATATGGTTAATTATGTTCAGTGGATGGCTAATGGATATAACAAGGTATCGCAACTCATTAGCCGTCTACTGAACACAAGTAACAATGATTTTGAAAGTCATTTACCACGATTTTCTAGTGTATATTCGAACATAAATCACAGTTGATAGATCATGTATATTTTAACACCTGAAAATCATTATATTTGAACACAATTTGGATGATTAATGGATATCACGTATATTTGGAAACCTTAAAATCGTGGTTAGCTAATGTTTGTGGATAGTGAATGAGTTGCAATACATTGCTATTATTTCTCTATTTTAATGAGCAATATTGCATCTGCATATACTTGCATGATGGTGTAGTTGGCCTTGTGCTATATGCAACCGTTACTGACAGAATTTCTGTTACAGGGAATGTTAATGAACCTCATTTCCCATAACAAGCAATCAACATCTAACATGGATGAGCAGCTGGATGGTCTACTGCATAAAGAGAGCTGGTTAGAGTCCAGGATGAAAGTATTGATTGAGGCATGTGAGGGAAATTCCTCTCTTCTGACCCAGGTAAAGAAGTTGAAGTATGCTGCAGAGAAAAATTCCTTGTGA

Protein sequence

>MS.gene071078.t1

MEKQNGEAKKKLVGSIVEKGIDDSGTQKKTTTDYSFPKPTVVPFPVARHRSHGPHWRPLNSKGGYDHDNDDGDNDVEDEDDTDFMGFEKAAAFANPVQRKKTKGIDFGKWREFTQDDKSFLGKDLEKDVSSYGPTTGRKKNENGGKNTSKKISSHSVDSVFASMEVDVKPQLVKSDGGFINSATSMELDTSNKDDKKEKEFAAERDKIFSDRMTDHSSASEKNYFMHEQESTSLESEIDSENRARIQQMSAEEIEEAKADIMEKISPALLKVLQKRGKEKLKKPNSLKSYVGAVAESVNQQVQSTQGAKHLPTEDDISHTIMAPPSKKQLDDKNVSGKTSTTTSSSSWNAWSNRVEAIRELRFSLAGDVVDTEQEPVYDNIAERDYLRTEGDPGAAGYTIKEALELTRSVIPGQRALALHLLSSVLDKALCYICKDRTGNMTKKGNKVDKSDDWEAVWTYALGPQPELALSLRMCLDDNHNSVVLACAKVVQSALSCDVNENYFDISENMATCDKDICTAPVFRSRPDISLGFLQGGYWKYSAKPSNIQPFSEDSMDNESDDKHTIQDDVFVAGQDFTAGLVRMGILPRLRYLLETDPTAALEECIVSILIAIVRHSPSCANAVLKCERLIQTIVQRFTVGNYEIRSSMIKSVKLLKVLARLDRKTCLEFIKNGYFNAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTTEQLRFWRVCIRYGYCVSHFSQIFPALCFWLDLPSFEKLTKNNVLNESTCISREAYLVLESLAGRLPNLFSQQCLTNQHPESTDDAEFWSWSYVGPMVDLAIKWIATRSDPEVYKLFEGQEEGVNHFTLRDLSATPLLWVYAAVTHMLFRVLEKVTLGDAISVQEANGHVPWLPEFVPKIGLELINYWHLGFSVASVTKSGRDSGDESFMKELIHLRQKGDVEMSLASTCCLNGIINVITKIDNLIRSAKTGICSPTGTEQSLSKEGKVLEEGIVSRCLVELRSMLDVFTFSASSGWQRMQSIEIFGRGGPAPGVGVGWGAHGGGFWSKTVLPVQTDARLLVRLLQIFENASNDAPETEQMTFTMQRVNTALGLCLTAGPADMVVIEKTLDLLFHVSILKYLDLCIRNFLLNRRGKAFGWQYEDDDYMHFSRMLSSHFRSRWLSVRVKSKTVDGSSSSGVQATPKADARLDTIYEDSDMSSTTSPCCNSLMVEWARQNLPLPVHFYLSPISTIPHTKRAGPQKVGSVHNTHDPANLLEVAKCGLFFVLGIETMSSFQGTGIPSPIQRVSLSWKLHSLSVNFHVGMEILEQDQGRETFEALQDLYGELLDKERFKQNKEAISDDKKHIEFLRFKSDIHESYSTFIEDLVEQFSSISYGDLIFGRQVSVYLHRCVESSIRLATWNTLSNARVLELLPPLEKCFSDAEGYLEPAEDNEEILEAYAKSWVSDALDRAEIRGSVSYTMAVHHLSSFIFNTCPVEKLLLRNRLVRSLLRDYAGKQQHEGMLMNLISHNKQSTSNMDEQLDGLLHKESWLESRMKVLIEACEGNSSLLTQVKKLKYAAEKNSL