AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055694


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055694.t1 MTR_1g055165 72.193 374 47 4 8 380 1 318 0.0 516
MS.gene055694.t1 MTR_1g055135 67.277 382 93 6 14 380 11 375 4.83e-171 482
MS.gene055694.t1 MTR_5g097210 56.150 374 130 8 15 376 8 359 2.14e-130 379
MS.gene055694.t1 MTR_1g055195 60.443 316 111 8 74 380 168 478 1.06e-121 360
MS.gene055694.t1 MTR_1g055175 84.577 201 31 0 180 380 1 201 2.55e-120 347
MS.gene055694.t1 MTR_4g109270 53.175 378 143 12 16 380 8 364 6.88e-115 339
MS.gene055694.t1 MTR_3g103020 52.094 382 145 12 15 380 19 378 1.32e-112 333
MS.gene055694.t1 MTR_4g117750 54.047 383 132 9 15 379 2 358 2.77e-112 337
MS.gene055694.t1 MTR_4g117750 48.182 110 54 3 271 378 373 481 4.44e-22 97.8
MS.gene055694.t1 MTR_3g034180 49.239 394 158 10 8 379 115 488 1.62e-111 335
MS.gene055694.t1 MTR_4g117850 51.587 378 140 11 14 373 21 373 5.31e-110 327
MS.gene055694.t1 MTR_4g109280 53.298 379 138 11 15 380 7 359 2.49e-109 325
MS.gene055694.t1 MTR_4g117770 50.131 381 154 10 14 380 9 367 5.46e-107 319
MS.gene055694.t1 MTR_4g117810 50.131 381 154 10 14 380 9 367 5.46e-107 319
MS.gene055694.t1 MTR_5g070080 49.869 383 167 10 15 379 9 384 1.23e-106 318
MS.gene055694.t1 MTR_4g117780 49.081 381 158 10 14 380 9 367 1.03e-104 313
MS.gene055694.t1 MTR_3g034130 50.000 374 146 10 15 366 8 362 2.84e-104 312
MS.gene055694.t1 MTR_4g122850 47.568 370 161 7 27 380 12 364 4.65e-104 312
MS.gene055694.t1 MTR_4g094365 49.211 380 157 8 15 380 7 364 2.91e-103 309
MS.gene055694.t1 MTR_4g116330 48.571 385 163 14 10 380 17 380 3.90e-103 310
MS.gene055694.t1 MTR_6g060650 51.289 388 144 12 15 379 7 372 1.05e-102 308
MS.gene055694.t1 MTR_5g070088 47.512 402 153 11 13 378 4 383 1.52e-102 308
MS.gene055694.t1 MTR_3g034160 48.232 396 159 10 8 379 1 374 5.01e-101 304
MS.gene055694.t1 MTR_4g023090 44.743 409 162 12 1 375 1 379 6.56e-101 304
MS.gene055694.t1 MTR_5g070130 48.831 385 160 12 12 377 7 373 1.16e-99 301
MS.gene055694.t1 MTR_4g023080 47.733 375 157 11 15 379 8 353 1.35e-99 300
MS.gene055694.t1 MTR_4g021785 48.806 377 153 12 15 380 8 355 3.24e-98 296
MS.gene055694.t1 MTR_8g433040 46.719 381 155 11 15 380 17 364 1.06e-95 290
MS.gene055694.t1 MTR_8g032380 46.719 381 155 11 15 380 17 364 1.06e-95 290
MS.gene055694.t1 MTR_4g023070 45.316 395 157 14 16 379 3 369 2.15e-95 290
MS.gene055694.t1 MTR_4g117720 45.844 397 131 12 5 378 40 375 2.44e-94 287
MS.gene055694.t1 MTR_4g118380 48.656 372 134 13 14 350 6 355 2.27e-92 281
MS.gene055694.t1 MTR_4g023380 43.301 418 160 12 1 380 1 379 5.58e-92 281
MS.gene055694.t1 MTR_4g023120 43.860 399 159 13 16 380 3 370 5.15e-91 278
MS.gene055694.t1 MTR_4g118370 53.232 263 93 5 124 376 14 256 2.12e-85 260
MS.gene055694.t1 MTR_4g023190 46.032 378 161 14 15 378 9 357 3.60e-85 263
MS.gene055694.t1 MTR_4g023440 43.342 383 135 11 14 380 16 332 2.96e-84 259
MS.gene055694.t1 MTR_4g023150 45.623 377 165 15 15 378 9 358 3.26e-84 260
MS.gene055694.t1 MTR_4g023200 44.658 365 156 15 30 378 24 358 1.36e-83 259
MS.gene055694.t1 MTR_8g032390 43.814 388 150 13 8 375 31 370 2.05e-81 254
MS.gene055694.t1 MTR_4g116330 43.896 385 142 15 10 380 17 341 2.29e-80 250
MS.gene055694.t1 MTR_8g013010 49.286 280 105 8 15 280 53 309 2.93e-76 238
MS.gene055694.t1 MTR_4g023130 42.933 375 134 12 15 379 8 312 4.83e-76 238
MS.gene055694.t1 MTR_1g055250 62.562 203 59 5 167 357 49 246 6.75e-74 233
MS.gene055694.t1 MTR_8g433030 41.842 380 136 12 8 375 31 337 2.16e-69 221
MS.gene055694.t1 MTR_4g121580 42.119 387 152 16 8 370 1 339 6.93e-68 219
MS.gene055694.t1 MTR_2g048580 37.067 375 198 12 10 380 2 342 3.68e-66 213
MS.gene055694.t1 MTR_4g118400 48.315 267 104 11 116 374 54 294 2.07e-64 207
MS.gene055694.t1 MTR_7g079400 43.796 274 131 8 126 380 68 337 2.02e-61 201
MS.gene055694.t1 MTR_4g117870 38.689 305 137 6 87 380 2 267 1.21e-60 197
MS.gene055694.t1 MTR_7g079370 38.333 360 169 15 45 375 16 351 3.37e-57 191
MS.gene055694.t1 MTR_8g102520 35.340 382 165 12 15 380 7 322 2.96e-52 177
MS.gene055694.t1 MTR_8g040935 50.746 201 85 8 188 380 14 208 7.58e-49 164
MS.gene055694.t1 MTR_4g116320 47.511 221 93 7 172 377 43 255 6.06e-48 163
MS.gene055694.t1 MTR_4g117530 40.964 249 89 9 148 380 47 253 2.53e-44 154
MS.gene055694.t1 MTR_6g463430 43.662 213 106 7 170 380 2 202 1.21e-42 148
MS.gene055694.t1 MTR_4g116340 41.833 251 91 9 14 246 34 247 1.20e-40 144
MS.gene055694.t1 MTR_7g079420 37.313 268 123 10 130 380 905 1144 1.61e-38 147
MS.gene055694.t1 MTR_4g114700 36.680 259 97 8 131 371 9 218 7.37e-37 134
MS.gene055694.t1 MTR_4g117430 47.742 155 71 3 131 280 3 152 4.55e-35 126
MS.gene055694.t1 MTR_4g118360 52.344 128 56 4 256 380 1 126 3.79e-32 118
MS.gene055694.t1 MTR_7g117720 40.000 210 77 7 15 209 9 184 5.04e-32 122
MS.gene055694.t1 MTR_7g117720 40.952 105 50 4 279 375 172 272 2.60e-14 72.8
MS.gene055694.t1 MTR_1g094210 27.806 392 224 12 3 372 44 398 2.30e-31 123
MS.gene055694.t1 MTR_4g109290 41.935 186 58 7 8 189 1 140 1.25e-30 115
MS.gene055694.t1 MTR_1g068875 29.907 321 166 12 16 310 4 291 1.33e-30 120
MS.gene055694.t1 MTR_1g094210 27.717 368 209 11 3 348 44 376 3.05e-30 120
MS.gene055694.t1 MTR_2g021155 30.239 377 211 15 14 364 34 384 2.08e-29 120
MS.gene055694.t1 MTR_2g028140 30.226 354 160 15 16 313 5 327 2.13e-29 118
MS.gene055694.t1 MTR_3g036290 31.373 357 196 16 13 360 19 335 6.13e-29 115
MS.gene055694.t1 MTR_5g022420 29.305 331 197 12 4 325 15 317 7.23e-29 115
MS.gene055694.t1 MTR_2g028130 30.909 330 175 11 16 310 5 316 1.94e-28 115
MS.gene055694.t1 MTR_1g068835 30.435 322 164 14 16 310 4 292 3.63e-28 114
MS.gene055694.t1 MTR_2g021050 28.889 360 190 14 16 346 5 327 6.39e-28 113
MS.gene055694.t1 MTR_4g055060 31.595 326 165 13 14 311 28 323 7.37e-28 113
MS.gene055694.t1 MTR_3g006670 31.529 314 165 16 14 305 47 332 7.38e-28 113
MS.gene055694.t1 MTR_2g021150 28.818 347 187 15 14 330 12 328 1.03e-27 112
MS.gene055694.t1 MTR_4g070550 29.016 386 196 14 16 351 5 362 1.85e-27 112
MS.gene055694.t1 MTR_2g046830 29.167 312 181 11 13 309 22 308 3.80e-27 111
MS.gene055694.t1 MTR_3g030250 28.617 311 192 10 4 309 25 310 3.82e-27 111
MS.gene055694.t1 MTR_2g021190 31.310 313 167 14 14 305 19 304 4.22e-27 110
MS.gene055694.t1 MTR_5g057020 30.464 302 160 12 16 304 46 310 4.86e-27 110
MS.gene055694.t1 MTR_5g057790 30.915 317 164 15 16 309 46 330 6.48e-27 110
MS.gene055694.t1 MTR_2g028110 29.919 371 188 16 16 350 4 338 6.91e-27 110
MS.gene055694.t1 MTR_5g057690 29.808 312 164 12 16 309 46 320 2.06e-26 109
MS.gene055694.t1 MTR_3g072470 30.723 332 181 11 16 313 19 335 3.40e-26 108
MS.gene055694.t1 MTR_7g056290 31.845 336 173 13 16 313 22 339 3.58e-26 108
MS.gene055694.t1 MTR_2g028160 28.875 329 183 11 16 309 5 317 3.75e-26 108
MS.gene055694.t1 MTR_2g426020 28.224 411 213 18 16 377 6 383 9.22e-26 107
MS.gene055694.t1 MTR_5g023000 57.292 96 37 3 287 380 6 99 1.31e-25 99.8
MS.gene055694.t1 MTR_4g122860 31.111 225 113 7 164 379 128 319 1.46e-25 106
MS.gene055694.t1 MTR_2g031720 29.321 324 169 13 16 309 6 299 1.58e-25 107
MS.gene055694.t1 MTR_6g053240 30.351 313 175 12 14 305 26 316 1.91e-25 106
MS.gene055694.t1 MTR_2g047832 28.955 335 172 13 13 309 26 332 1.99e-25 107
MS.gene055694.t1 MTR_0667s0010 29.940 334 161 14 16 309 6 306 2.62e-25 106
MS.gene055694.t1 MTR_3g014540 31.975 319 164 13 14 309 27 315 2.75e-25 105
MS.gene055694.t1 MTR_8g098830 39.759 166 95 4 188 351 35 197 2.97e-25 102
MS.gene055694.t1 MTR_2g046920 29.904 311 180 14 13 309 21 307 3.19e-25 105
MS.gene055694.t1 MTR_1g068860 29.193 322 170 11 16 310 4 294 3.27e-25 105
MS.gene055694.t1 MTR_0760s0010 31.229 301 159 14 21 306 52 319 3.33e-25 105
MS.gene055694.t1 MTR_4g133170 27.414 321 163 13 16 305 4 285 3.60e-25 105
MS.gene055694.t1 MTR_3g007330 30.547 311 174 9 14 310 46 328 4.58e-25 105
MS.gene055694.t1 MTR_4g061340 29.483 329 184 13 4 310 14 316 7.13e-25 104
MS.gene055694.t1 MTR_6g053260 30.744 309 174 12 14 305 335 620 7.40e-25 106
MS.gene055694.t1 MTR_3g011100 29.353 402 208 18 14 372 233 601 7.41e-25 106
MS.gene055694.t1 MTR_2g031680 28.882 322 166 13 16 309 6 292 7.46e-25 104
MS.gene055694.t1 MTR_2g426060 27.941 340 170 14 16 311 6 314 9.88e-25 104
MS.gene055694.t1 MTR_1g097330 29.193 322 164 13 14 309 14 297 1.19e-24 104
MS.gene055694.t1 MTR_3g006500 28.803 309 196 11 8 309 9 300 1.23e-24 103
MS.gene055694.t1 MTR_3g014570 31.447 318 169 13 14 310 27 316 1.46e-24 103
MS.gene055694.t1 MTR_3g010590 29.630 297 177 11 14 305 37 306 2.16e-24 103
MS.gene055694.t1 MTR_3g009310 31.329 316 170 14 14 310 40 327 2.45e-24 103
MS.gene055694.t1 MTR_1g055145 65.060 83 28 1 214 296 121 202 2.52e-24 101
MS.gene055694.t1 MTR_1g055145 52.252 111 37 2 19 129 36 130 3.19e-23 98.6
MS.gene055694.t1 MTR_7g070880 26.328 433 226 14 9 373 14 421 2.62e-24 103
MS.gene055694.t1 MTR_3g007410 28.906 384 209 16 19 373 55 403 3.08e-24 103
MS.gene055694.t1 MTR_5g057710 29.467 319 166 15 16 309 46 330 3.64e-24 103
MS.gene055694.t1 MTR_5g069120 38.776 196 78 8 26 197 1 178 3.96e-24 98.2
MS.gene055694.t1 MTR_7g056390 31.454 337 173 12 16 313 18 335 3.97e-24 103
MS.gene055694.t1 MTR_3g007360 28.385 384 211 16 19 373 55 403 4.37e-24 102
MS.gene055694.t1 MTR_7g079450 41.007 139 78 3 242 380 3 137 4.92e-24 96.7
MS.gene055694.t1 MTR_7g070830 26.950 423 222 13 16 373 21 421 5.96e-24 102
MS.gene055694.t1 MTR_2g426090 27.568 370 201 13 19 351 9 348 7.61e-24 102
MS.gene055694.t1 MTR_2g426070 28.726 369 197 14 17 347 7 347 8.94e-24 102
MS.gene055694.t1 MTR_2g078900 29.874 318 178 13 4 305 21 309 9.92e-24 101
MS.gene055694.t1 MTR_6g065980 29.139 302 171 13 14 305 14 282 1.06e-23 101
MS.gene055694.t1 MTR_8g467140 29.677 310 180 11 15 309 31 317 1.52e-23 100
MS.gene055694.t1 MTR_2g046900 27.937 315 189 12 13 309 25 319 1.52e-23 101
MS.gene055694.t1 MTR_8g062660 25.616 406 216 17 3 373 9 363 1.56e-23 102
MS.gene055694.t1 MTR_2g024110 29.114 316 168 12 16 305 4 289 1.71e-23 100
MS.gene055694.t1 MTR_4g108820 28.571 308 149 10 14 309 40 288 1.76e-23 99.8
MS.gene055694.t1 MTR_3g009240 30.225 311 166 12 14 305 34 312 1.93e-23 100
MS.gene055694.t1 MTR_2g031640 30.124 322 165 16 16 309 6 295 1.93e-23 100
MS.gene055694.t1 MTR_2g025420 28.000 350 175 15 16 314 6 329 2.30e-23 101
MS.gene055694.t1 MTR_2g425980 30.026 383 182 18 16 346 5 353 2.36e-23 100
MS.gene055694.t1 MTR_2g021210 32.459 305 165 13 13 305 81 356 3.33e-23 100
MS.gene055694.t1 MTR_3g023930 30.435 299 165 11 14 305 32 294 4.21e-23 99.8
MS.gene055694.t1 MTR_4g107820 27.164 335 169 14 4 309 29 317 4.43e-23 99.8
MS.gene055694.t1 MTR_4g107780 27.164 335 169 14 4 309 29 317 4.43e-23 99.8
MS.gene055694.t1 MTR_2g055970 30.063 316 171 15 15 309 210 496 4.62e-23 101
MS.gene055694.t1 MTR_5g011200 30.623 369 199 18 16 361 17 351 5.34e-23 99.4
MS.gene055694.t1 MTR_6g027910 30.102 392 207 20 19 372 12 374 5.62e-23 99.4
MS.gene055694.t1 MTR_4g107780 27.164 335 169 14 4 309 29 317 5.78e-23 99.8
MS.gene055694.t1 MTR_4g107820 27.164 335 169 14 4 309 29 317 6.06e-23 99.8
MS.gene055694.t1 MTR_3g010870 30.592 304 172 13 14 305 35 311 7.10e-23 99.4
MS.gene055694.t1 MTR_8g099460 28.933 356 177 16 16 330 5 325 1.02e-22 99.0
MS.gene055694.t1 MTR_3g007430 28.981 314 161 11 19 305 46 324 1.36e-22 98.6
MS.gene055694.t1 MTR_3g436150 32.492 317 170 17 14 305 30 327 1.39e-22 98.6
MS.gene055694.t1 MTR_1g056710 32.903 310 167 16 16 309 34 318 2.30e-22 97.8
MS.gene055694.t1 MTR_7g007300 30.795 302 175 12 16 309 103 378 2.95e-22 98.2
MS.gene055694.t1 MTR_2g046800 30.372 349 175 19 14 318 12 336 3.23e-22 97.4
MS.gene055694.t1 MTR_1g097490 31.250 320 169 17 9 309 42 329 3.91e-22 97.1
MS.gene055694.t1 MTR_7g056003 28.283 396 213 16 11 358 10 382 6.52e-22 96.7
MS.gene055694.t1 MTR_2g026010 27.500 320 180 11 16 309 4 297 8.51e-22 96.3
MS.gene055694.t1 MTR_3g010970 29.795 292 174 12 19 305 51 316 8.53e-22 96.3
MS.gene055694.t1 MTR_3g010920 28.859 298 173 9 14 305 42 306 1.13e-21 95.9
MS.gene055694.t1 MTR_3g007270 28.528 326 178 16 14 310 45 344 1.23e-21 95.9
MS.gene055694.t1 MTR_3g083010 27.407 405 233 15 16 374 6 395 1.48e-21 95.9
MS.gene055694.t1 MTR_4g031770 28.481 316 174 14 16 309 4 289 1.67e-21 95.1
MS.gene055694.t1 MTR_1g114700 30.097 309 181 12 14 307 27 315 1.75e-21 95.1
MS.gene055694.t1 MTR_1g055200 66.667 63 20 1 127 188 5 67 1.79e-21 88.6
MS.gene055694.t1 MTR_7g407070 31.003 329 165 15 14 305 30 333 1.80e-21 95.5
MS.gene055694.t1 MTR_3g013740 30.503 318 186 14 12 309 40 342 1.88e-21 95.5
MS.gene055694.t1 MTR_3g024150 30.000 300 172 15 19 305 38 312 2.05e-21 95.1
MS.gene055694.t1 MTR_3g083640 28.010 382 220 16 14 372 53 402 2.06e-21 95.1
MS.gene055694.t1 MTR_3g024110 28.763 299 182 11 14 305 99 373 2.32e-21 95.5
MS.gene055694.t1 MTR_0044s0300 27.385 325 176 14 5 305 27 315 2.50e-21 94.7
MS.gene055694.t1 MTR_8g101580 26.234 385 225 16 14 372 43 394 2.88e-21 94.7
MS.gene055694.t1 MTR_4g037465 30.226 354 187 13 14 330 19 349 4.17e-21 94.4
MS.gene055694.t1 MTR_3g010390 30.696 316 190 14 14 310 31 336 5.19e-21 94.0
MS.gene055694.t1 MTR_5g007610 30.211 331 165 14 14 310 39 337 5.36e-21 94.0
MS.gene055694.t1 MTR_6g080680 27.105 380 208 13 4 344 7 356 5.52e-21 94.0
MS.gene055694.t1 MTR_1g061330 26.250 400 220 17 16 380 4 363 7.10e-21 93.6
MS.gene055694.t1 MTR_2g029990 30.449 312 165 17 17 305 52 334 1.25e-20 92.8
MS.gene055694.t1 MTR_7g056820 27.415 383 200 15 14 350 5 355 1.35e-20 92.8
MS.gene055694.t1 MTR_3g036335 28.710 310 177 14 14 305 39 322 1.38e-20 92.8
MS.gene055694.t1 MTR_3g010520 27.832 309 179 13 5 305 14 286 1.51e-20 92.4
MS.gene055694.t1 MTR_7g055977 30.994 342 161 16 8 310 1 306 1.97e-20 92.0
MS.gene055694.t1 MTR_3g013770 30.503 318 174 14 14 309 31 323 2.25e-20 92.0
MS.gene055694.t1 MTR_2g104340 25.768 423 229 16 4 373 2 392 2.30e-20 92.0
MS.gene055694.t1 MTR_0128s0020 28.182 330 197 12 8 313 10 323 2.40e-20 92.0
MS.gene055694.t1 MTR_3g036430 28.758 306 150 12 14 305 18 269 3.01e-20 91.3
MS.gene055694.t1 MTR_3g010430 29.338 317 167 14 14 305 34 318 3.10e-20 92.0
MS.gene055694.t1 MTR_1g050542 27.974 311 168 12 14 304 56 330 3.32e-20 91.7
MS.gene055694.t1 MTR_1g097560 27.298 359 203 17 5 342 25 346 3.81e-20 91.3
MS.gene055694.t1 MTR_3g006530 25.888 394 222 16 14 372 38 396 4.15e-20 91.3
MS.gene055694.t1 MTR_4g030830 25.971 412 239 13 8 372 1 393 5.93e-20 90.9
MS.gene055694.t1 MTR_1g054575 27.673 318 188 10 14 317 50 339 7.38e-20 91.7
MS.gene055694.t1 MTR_4g006270 27.861 402 205 17 16 378 4 359 8.99e-20 90.5
MS.gene055694.t1 MTR_4g023430 72.414 58 16 0 15 72 40 97 9.96e-20 87.4
MS.gene055694.t1 MTR_7g060960 30.699 329 157 12 16 322 32 311 1.10e-19 89.7
MS.gene055694.t1 MTR_7g077970 29.254 335 187 13 14 310 5 327 2.16e-19 89.4
MS.gene055694.t1 MTR_6g090180 25.897 390 203 13 10 344 41 399 2.64e-19 89.4
MS.gene055694.t1 MTR_6g021880 28.333 300 176 10 27 305 31 312 3.20e-19 88.6
MS.gene055694.t1 MTR_3g006570 29.167 312 172 11 14 305 19 301 3.20e-19 88.6
MS.gene055694.t1 MTR_2g038680 24.697 413 235 12 16 373 16 407 3.30e-19 89.0
MS.gene055694.t1 MTR_1g054725 30.744 309 175 15 15 305 19 306 3.89e-19 88.2
MS.gene055694.t1 MTR_3g030310 28.115 313 179 13 14 305 19 306 4.07e-19 88.6
MS.gene055694.t1 MTR_1g115160 27.907 301 183 10 15 307 21 295 4.14e-19 88.2
MS.gene055694.t1 MTR_7g078860 26.220 328 201 10 15 313 8 323 4.64e-19 88.2
MS.gene055694.t1 MTR_2g461450 28.852 305 171 11 16 305 18 291 1.17e-18 86.7
MS.gene055694.t1 MTR_2g006360 29.283 321 154 14 9 318 39 297 1.21e-18 86.7
MS.gene055694.t1 MTR_0115s0020 25.183 409 236 17 16 375 10 397 1.24e-18 87.0
MS.gene055694.t1 MTR_1g055375 27.564 312 183 12 19 309 7 296 1.82e-18 86.3
MS.gene055694.t1 MTR_5g097330 23.445 418 256 12 1 373 1 399 2.08e-18 86.7
MS.gene055694.t1 MTR_5g022040 25.691 362 193 13 16 311 40 391 2.12e-18 87.0
MS.gene055694.t1 MTR_1g442850 28.443 334 176 17 15 313 4 309 2.63e-18 85.9
MS.gene055694.t1 MTR_3g030330 28.254 315 197 11 14 322 18 309 2.83e-18 85.9
MS.gene055694.t1 MTR_7g061060 27.052 329 178 15 12 305 9 310 3.12e-18 85.9
MS.gene055694.t1 MTR_0128s0070 30.462 325 181 13 16 314 22 327 3.85e-18 85.5
MS.gene055694.t1 MTR_7g066000 27.525 396 230 17 15 371 24 401 3.97e-18 85.5
MS.gene055694.t1 MTR_6g048140 28.525 305 187 10 14 305 37 323 5.34e-18 85.1
MS.gene055694.t1 MTR_4g028510 26.620 432 224 20 1 373 1 398 6.46e-18 85.5
MS.gene055694.t1 MTR_8g073550 32.683 205 103 8 14 201 28 214 6.47e-18 82.4
MS.gene055694.t1 MTR_2g043400 29.394 330 178 12 16 310 23 332 6.73e-18 85.1
MS.gene055694.t1 MTR_3g058480 33.333 270 134 14 14 260 37 283 7.92e-18 84.0
MS.gene055694.t1 MTR_2g025960 27.928 222 117 7 124 309 1 215 8.09e-18 83.6
MS.gene055694.t1 MTR_0464s0020 29.429 333 192 15 16 313 23 347 8.12e-18 84.7
MS.gene055694.t1 MTR_0054s0090 23.961 409 245 15 12 373 13 402 8.70e-18 84.7
MS.gene055694.t1 MTR_7g060940 27.245 323 181 9 16 307 22 321 9.91e-18 84.3
MS.gene055694.t1 MTR_2g021800 25.173 433 247 15 1 375 1 414 1.06e-17 84.3
MS.gene055694.t1 MTR_5g069760 26.140 329 178 11 15 310 5 301 1.16e-17 84.0
MS.gene055694.t1 MTR_1g088120 27.219 338 190 9 15 313 9 329 1.17e-17 84.3
MS.gene055694.t1 MTR_0242s0060 29.446 343 178 15 8 307 1 322 1.28e-17 84.3
MS.gene055694.t1 MTR_0242s0040 29.446 343 178 15 8 307 1 322 1.28e-17 84.3
MS.gene055694.t1 MTR_5g008530 71.930 57 14 1 16 72 18 72 1.38e-17 77.0
MS.gene055694.t1 MTR_6g004660 28.571 315 180 12 16 305 16 310 1.49e-17 83.6
MS.gene055694.t1 MTR_7g055987 28.615 325 171 13 18 313 22 314 1.58e-17 83.6
MS.gene055694.t1 MTR_3g013950 27.941 408 212 18 19 374 9 386 1.96e-17 83.6
MS.gene055694.t1 MTR_5g097680 24.161 447 226 19 8 373 9 423 2.76e-17 83.2
MS.gene055694.t1 MTR_7g057270 28.363 342 189 13 16 320 26 348 3.18e-17 83.2
MS.gene055694.t1 MTR_4g019990 25.610 410 240 14 11 380 1 385 3.72e-17 82.8
MS.gene055694.t1 MTR_7g050520 28.135 327 164 13 15 305 21 312 4.55e-17 82.4
MS.gene055694.t1 MTR_2g021770 27.960 397 215 17 8 351 4 382 4.68e-17 82.4
MS.gene055694.t1 MTR_6g086825 25.537 419 217 16 15 371 69 454 6.60e-17 82.4
MS.gene055694.t1 MTR_2g043410 29.141 326 184 9 16 310 22 331 6.63e-17 82.0
MS.gene055694.t1 MTR_5g037680 26.888 331 190 11 13 309 5 317 7.35e-17 82.0
MS.gene055694.t1 MTR_0267s0050 27.749 382 197 16 19 349 9 362 7.57e-17 81.6
MS.gene055694.t1 MTR_3g010620 27.473 364 209 16 14 364 34 355 8.14e-17 81.6
MS.gene055694.t1 MTR_4g055820 27.154 383 198 19 1 329 1 356 8.16e-17 81.3
MS.gene055694.t1 MTR_4g117550 24.570 407 228 15 4 373 5 369 9.67e-17 81.3
MS.gene055694.t1 MTR_0129s0070 25.628 398 221 16 1 351 2 371 1.19e-16 81.3
MS.gene055694.t1 MTR_4g129190 27.273 330 183 12 16 310 6 313 1.33e-16 80.9
MS.gene055694.t1 MTR_1g055070 28.261 276 147 12 16 260 49 304 1.36e-16 80.9
MS.gene055694.t1 MTR_2g078850 26.948 308 173 11 19 305 33 309 1.40e-16 80.9
MS.gene055694.t1 MTR_1g115185 26.016 369 216 14 14 366 37 364 1.63e-16 80.9
MS.gene055694.t1 MTR_5g068040 27.679 336 161 13 16 313 16 307 1.69e-16 80.5
MS.gene055694.t1 MTR_7g066850 24.939 409 246 14 8 372 13 404 1.78e-16 80.9
MS.gene055694.t1 MTR_3g009260 27.331 311 172 12 14 305 39 314 2.02e-16 80.5
MS.gene055694.t1 MTR_4g129160 28.070 342 189 16 12 310 3 330 2.21e-16 80.1
MS.gene055694.t1 MTR_7g078040 29.143 350 189 16 8 310 1 338 2.28e-16 80.5
MS.gene055694.t1 MTR_5g096910 25.250 400 244 18 9 373 10 389 2.32e-16 80.5
MS.gene055694.t1 MTR_6g461660 26.781 351 183 17 7 308 10 335 2.93e-16 80.1
MS.gene055694.t1 MTR_7g062100 28.783 337 171 14 16 315 24 328 3.43e-16 79.7
MS.gene055694.t1 MTR_5g046260 26.415 371 186 17 14 372 2 297 3.91e-16 78.6
MS.gene055694.t1 MTR_4g030980 24.879 414 225 17 11 358 10 403 5.92e-16 79.3
MS.gene055694.t1 MTR_5g022045 26.844 339 182 13 16 311 35 350 7.17e-16 79.3
MS.gene055694.t1 MTR_6g048120 28.205 312 185 12 14 305 34 326 9.90e-16 78.6
MS.gene055694.t1 MTR_4g024890 26.524 328 173 15 15 305 9 305 1.19e-15 78.2
MS.gene055694.t1 MTR_4g013180 26.866 335 186 12 15 313 10 321 1.30e-15 78.6
MS.gene055694.t1 MTR_7g050480 27.829 327 165 14 15 305 21 312 1.40e-15 77.8
MS.gene055694.t1 MTR_7g056760 29.358 327 180 15 15 307 22 331 1.46e-15 78.2
MS.gene055694.t1 MTR_7g013590 27.937 315 166 12 19 305 39 320 1.55e-15 77.8
MS.gene055694.t1 MTR_7g066030 25.420 417 220 19 15 373 20 403 1.72e-15 77.8
MS.gene055694.t1 MTR_2g021252 26.579 380 214 18 19 375 50 387 1.74e-15 77.8
MS.gene055694.t1 MTR_5g027330 24.012 329 195 13 20 315 44 350 1.90e-15 77.8
MS.gene055694.t1 MTR_2g031700 28.470 281 132 14 16 264 6 249 2.04e-15 76.3
MS.gene055694.t1 MTR_6g017280 27.647 340 166 17 16 310 9 313 2.84e-15 77.0
MS.gene055694.t1 MTR_8g039500 25.538 325 191 13 10 305 6 308 3.00e-15 76.6
MS.gene055694.t1 MTR_3g010870 31.169 231 119 10 14 231 35 238 3.12e-15 76.3
MS.gene055694.t1 MTR_7g055930 26.157 432 224 20 16 372 13 424 3.22e-15 77.0
MS.gene055694.t1 MTR_7g061050 27.089 347 188 16 12 322 9 326 3.74e-15 76.6
MS.gene055694.t1 MTR_7g070440 25.959 339 174 14 13 310 4 306 4.51e-15 76.3
MS.gene055694.t1 MTR_6g478230 25.542 415 236 17 3 371 14 401 4.69e-15 76.6
MS.gene055694.t1 MTR_6g013270 27.532 316 181 13 14 307 27 316 4.78e-15 76.3
MS.gene055694.t1 MTR_5g069930 25.836 329 184 12 15 310 5 306 6.60e-15 75.9
MS.gene055694.t1 MTR_8g012090 26.012 346 189 15 12 329 12 318 8.27e-15 75.1
MS.gene055694.t1 MTR_3g058470 27.302 315 156 13 14 305 35 299 8.27e-15 75.5
MS.gene055694.t1 MTR_2g047200 27.515 338 188 13 16 319 20 334 8.61e-15 75.5
MS.gene055694.t1 MTR_7g017130 25.074 339 185 14 16 309 18 332 9.66e-15 75.5
MS.gene055694.t1 MTR_7g055870 25.806 434 223 18 16 372 13 424 1.05e-14 75.5
MS.gene055694.t1 MTR_7g017170 25.074 339 185 14 16 309 18 332 1.06e-14 75.5
MS.gene055694.t1 MTR_2g022000 26.596 376 201 16 12 329 12 370 1.27e-14 75.5
MS.gene055694.t1 MTR_1g055055 28.105 306 178 15 16 313 26 297 1.42e-14 74.7
MS.gene055694.t1 MTR_5g056020 24.251 367 206 14 14 327 15 362 1.42e-14 75.5
MS.gene055694.t1 MTR_7g056260 26.087 322 192 10 16 310 14 316 1.52e-14 74.3
MS.gene055694.t1 MTR_1g068905 30.000 260 126 13 16 260 4 222 1.55e-14 73.9
MS.gene055694.t1 MTR_5g057643 30.392 204 110 8 16 204 46 232 1.65e-14 73.6
MS.gene055694.t1 MTR_7g066840 24.297 391 246 14 16 372 23 397 1.81e-14 74.7
MS.gene055694.t1 MTR_2g047892 27.019 322 181 15 16 305 22 321 1.85e-14 74.7
MS.gene055694.t1 MTR_5g096710 28.213 319 179 9 16 305 23 320 1.94e-14 74.7
MS.gene055694.t1 MTR_5g023570 37.600 125 53 5 15 137 36 137 1.99e-14 70.5
MS.gene055694.t1 MTR_7g062060 25.872 344 186 12 15 310 11 333 2.19e-14 74.3
MS.gene055694.t1 MTR_3g023940 24.737 380 237 18 14 372 32 383 2.30e-14 74.3
MS.gene055694.t1 MTR_0054s0100 23.558 416 236 16 12 371 13 402 2.31e-14 74.3
MS.gene055694.t1 MTR_7g061090 25.301 332 196 11 15 310 21 336 2.31e-14 74.3
MS.gene055694.t1 MTR_6g007135 27.070 314 190 13 16 309 26 320 2.48e-14 74.3
MS.gene055694.t1 MTR_5g057040 31.220 205 107 9 16 204 46 232 2.60e-14 75.1
MS.gene055694.t1 MTR_7g079160 26.303 422 202 18 15 358 7 397 2.78e-14 74.3
MS.gene055694.t1 MTR_6g046320 27.429 350 190 16 16 311 39 378 2.90e-14 74.3
MS.gene055694.t1 MTR_3g030350 28.664 307 177 15 14 305 33 312 3.11e-14 73.9
MS.gene055694.t1 MTR_7g091640 25.872 344 188 20 15 318 34 350 3.22e-14 73.6
MS.gene055694.t1 MTR_2g021950 25.441 397 206 21 1 344 1 360 3.73e-14 73.6
MS.gene055694.t1 MTR_7g067680 29.221 308 159 16 14 305 47 311 3.82e-14 73.6
MS.gene055694.t1 MTR_4g033495 25.982 331 191 12 16 313 27 336 3.92e-14 73.9
MS.gene055694.t1 MTR_3g437520 27.164 335 200 13 16 313 23 350 4.50e-14 73.9
MS.gene055694.t1 MTR_7g056170 25.195 385 173 16 15 328 74 414 4.82e-14 73.6
MS.gene055694.t1 MTR_5g022090 25.397 315 166 12 16 306 34 303 5.86e-14 73.2
MS.gene055694.t1 MTR_3g096250 27.759 299 153 14 14 305 45 287 6.10e-14 72.8
MS.gene055694.t1 MTR_6g034720 35.625 160 80 5 154 294 53 208 6.24e-14 70.9
MS.gene055694.t1 MTR_4g130330 27.676 383 187 21 15 344 6 351 6.98e-14 72.8
MS.gene055694.t1 MTR_7g017040 24.292 424 250 17 1 378 1 399 7.07e-14 72.8
MS.gene055694.t1 MTR_4g031020 24.752 404 228 17 16 358 15 403 7.23e-14 73.2
MS.gene055694.t1 MTR_5g048160 25.740 338 181 15 16 305 4 319 7.51e-14 72.8
MS.gene055694.t1 MTR_3g024040 25.000 292 193 7 22 310 37 305 7.64e-14 72.8
MS.gene055694.t1 MTR_2g034700 26.000 350 199 16 10 329 8 327 8.97e-14 72.4
MS.gene055694.t1 MTR_4g028680 25.210 357 197 16 1 309 1 335 9.82e-14 72.4
MS.gene055694.t1 MTR_7g052150 27.089 347 170 14 16 316 22 331 1.05e-13 72.4
MS.gene055694.t1 MTR_1g071010 24.633 341 207 14 8 318 7 327 1.09e-13 72.4
MS.gene055694.t1 MTR_4g030090 24.611 321 190 9 17 305 15 315 1.14e-13 72.4
MS.gene055694.t1 MTR_7g028660 27.381 336 174 15 15 310 10 315 1.16e-13 72.0
MS.gene055694.t1 MTR_6g004210 27.900 319 178 12 27 309 36 338 1.27e-13 72.0
MS.gene055694.t1 MTR_4g028750 25.700 393 209 19 1 344 1 359 1.38e-13 72.0
MS.gene055694.t1 MTR_4g013185 27.066 351 186 16 15 313 9 341 1.64e-13 72.0
MS.gene055694.t1 MTR_7g056503 24.024 333 191 10 15 310 20 327 2.58e-13 71.2
MS.gene055694.t1 MTR_7g016930 26.190 336 177 16 12 312 12 311 2.66e-13 70.5
MS.gene055694.t1 MTR_4g011660 32.065 184 103 4 16 186 19 193 2.78e-13 71.2
MS.gene055694.t1 MTR_1g112930 25.559 313 175 15 14 304 23 299 3.48e-13 70.5
MS.gene055694.t1 MTR_1g015730 25.664 339 189 14 8 313 1 309 3.51e-13 70.9
MS.gene055694.t1 MTR_8g063370 23.896 385 222 17 24 369 32 384 3.53e-13 70.9
MS.gene055694.t1 MTR_5g043160 28.319 339 181 17 18 307 52 377 6.71e-13 70.1
MS.gene055694.t1 MTR_3g058440 29.297 256 133 13 16 248 35 265 6.93e-13 69.3
MS.gene055694.t1 MTR_8g013005 51.667 60 28 1 321 380 1 59 8.42e-13 63.2
MS.gene055694.t1 MTR_1g007410 26.225 347 175 15 12 305 18 336 8.62e-13 69.7
MS.gene055694.t1 MTR_7g035295 27.273 319 164 12 16 305 16 295 9.30e-13 69.3
MS.gene055694.t1 MTR_5g069390 24.318 403 247 16 13 371 23 411 9.31e-13 69.7
MS.gene055694.t1 MTR_7g061010 28.221 326 168 13 16 307 22 315 9.61e-13 69.3
MS.gene055694.t1 MTR_4g080200 23.967 363 210 12 16 351 3 326 1.22e-12 68.9
MS.gene055694.t1 MTR_7g078050 31.285 179 89 8 16 189 6 155 1.27e-12 67.4
MS.gene055694.t1 MTR_7g091630 23.754 341 203 13 15 318 31 351 1.28e-12 69.3
MS.gene055694.t1 MTR_6g055210 25.714 350 169 16 10 304 16 329 1.58e-12 68.9
MS.gene055694.t1 MTR_7g078900 25.641 351 197 16 6 310 2 334 1.91e-12 68.6
MS.gene055694.t1 MTR_3g010440 24.342 304 150 11 14 310 24 254 1.95e-12 68.2
MS.gene055694.t1 MTR_4g024870 27.059 255 147 8 1 235 27 262 2.01e-12 68.6
MS.gene055694.t1 MTR_0627s0010 26.087 345 186 16 16 311 38 362 2.04e-12 68.6
MS.gene055694.t1 MTR_7g050490 32.500 200 104 8 15 201 7 188 2.80e-12 65.5
MS.gene055694.t1 MTR_4g030110 24.850 334 168 13 16 310 30 319 3.25e-12 67.8
MS.gene055694.t1 MTR_2g437110 27.744 328 180 16 16 310 22 325 3.68e-12 67.8
MS.gene055694.t1 MTR_7g077070 23.304 339 194 14 16 305 16 337 3.76e-12 67.8
MS.gene055694.t1 MTR_0129s0120 25.065 387 219 14 1 342 2 362 4.47e-12 67.4
MS.gene055694.t1 MTR_7g056797 30.952 210 108 9 15 201 22 217 4.97e-12 67.4
MS.gene055694.t1 MTR_4g013175 27.807 374 191 15 8 324 1 352 5.63e-12 67.0
MS.gene055694.t1 MTR_7g056200 24.551 334 179 12 9 310 16 308 5.98e-12 67.0
MS.gene055694.t1 MTR_3g011650 30.000 240 121 12 14 235 74 284 1.04e-11 65.5
MS.gene055694.t1 MTR_0097s0030 25.697 323 182 11 16 307 14 309 1.06e-11 66.2
MS.gene055694.t1 MTR_2g047240 25.697 323 182 11 16 307 14 309 1.06e-11 66.2
MS.gene055694.t1 MTR_7g056710 26.543 324 172 14 15 305 17 307 1.10e-11 66.2
MS.gene055694.t1 MTR_7g078840 25.208 361 201 13 8 313 1 347 1.41e-11 65.9
MS.gene055694.t1 MTR_2g022170 33.803 142 67 5 19 159 7 122 1.44e-11 62.0
MS.gene055694.t1 MTR_0831s0010 24.757 412 214 20 15 373 49 417 1.47e-11 65.9
MS.gene055694.t1 MTR_4g134560 23.343 347 198 12 16 309 31 362 1.72e-11 65.9
MS.gene055694.t1 MTR_3g006300 62.791 43 16 0 14 56 28 70 2.12e-11 60.1
MS.gene055694.t1 MTR_3g009250 29.114 237 123 10 14 235 39 245 2.49e-11 63.5
MS.gene055694.t1 MTR_7g055850 30.396 227 105 11 16 202 13 226 2.61e-11 64.3
MS.gene055694.t1 MTR_8g467670 22.581 372 220 16 9 339 7 351 2.66e-11 65.1
MS.gene055694.t1 MTR_6g092560 24.776 335 175 13 16 305 12 314 3.32e-11 64.7
MS.gene055694.t1 MTR_0134s0060 25.063 395 205 19 12 344 8 373 4.25e-11 64.3
MS.gene055694.t1 MTR_4g023100 43.939 66 33 2 315 379 56 118 7.13e-11 59.7
MS.gene055694.t1 MTR_3g030320 31.250 192 103 10 129 305 46 223 8.47e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055694.t1 AT3G06240 29.602 402 220 16 16 372 36 419 8.57e-30 119
MS.gene055694.t1 AT4G12560 28.446 341 176 15 16 319 4 313 4.77e-22 97.4
MS.gene055694.t1 AT4G12560 28.446 341 176 15 16 319 4 313 4.77e-22 97.4
MS.gene055694.t1 AT4G12560 28.446 341 176 15 16 319 4 313 4.77e-22 97.4
MS.gene055694.t1 AT3G23880 27.245 323 188 10 6 307 3 299 2.42e-21 94.7
MS.gene055694.t1 AT3G07870 27.245 323 190 9 16 312 28 331 2.00e-18 86.7
MS.gene055694.t1 AT1G11620 25.806 310 190 16 16 309 6 291 6.89e-14 72.8
MS.gene055694.t1 AT1G47790 24.351 308 201 11 17 317 26 308 8.90e-14 72.4
MS.gene055694.t1 AT4G22390 25.150 334 194 13 17 321 5 311 1.32e-13 72.0
MS.gene055694.t1 AT4G22390 25.150 334 194 13 17 321 5 311 1.42e-13 72.0
MS.gene055694.t1 AT3G16210 24.058 345 193 13 12 332 1 300 8.15e-13 69.3
MS.gene055694.t1 AT3G52320 23.926 326 205 9 14 321 25 325 1.71e-12 68.6
MS.gene055694.t1 AT4G19940 24.148 352 205 11 14 330 33 357 3.51e-12 67.8
MS.gene055694.t1 AT4G21240 26.129 310 186 13 16 309 36 318 5.94e-12 67.0
MS.gene055694.t1 AT2G40925 23.743 358 192 16 16 330 27 346 9.76e-12 66.2
MS.gene055694.t1 AT3G20710 23.344 317 199 12 16 316 6 294 1.91e-11 65.5
MS.gene055694.t1 AT2G04920 28.302 265 153 13 16 267 4 244 3.17e-11 64.7
MS.gene055694.t1 AT3G22720 23.077 364 226 16 16 349 5 344 5.22e-11 63.9
MS.gene055694.t1 AT1G12870 21.693 378 226 15 16 354 33 379 5.67e-11 63.9
MS.gene055694.t1 AT4G09190 23.098 368 231 14 15 366 21 352 7.53e-11 63.5
MS.gene055694.t1 AT3G08750 24.609 256 145 9 14 256 10 230 7.54e-11 63.5
MS.gene055694.t1 AT3G17710 22.356 331 205 13 16 324 6 306 8.60e-11 63.2
MS.gene055694.t1 AT1G30790 24.930 357 211 13 15 337 8 341 9.69e-11 63.2

Find 91 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCTATGGATTGTGGTTTA+TGG 0.205119 1.2:-45209163 MS.gene055694:CDS
TTCAGTTTCGTTTGATTACT+TGG 0.224065 1.2:-45209414 MS.gene055694:CDS
GGCGGAGGTGGCGGAAATTA+TGG 0.254555 1.2:-45209954 MS.gene055694:CDS
CTGGTAACCTCAATAGGATT+TGG 0.255873 1.2:+45209891 None:intergenic
TTAGAGGATTTCTAAGTCTA+TGG 0.269614 1.2:-45209136 MS.gene055694:CDS
TTAGTAGAGTCGGTCTTTAA+TGG 0.303396 1.2:-45209299 MS.gene055694:CDS
TAGTAGAGTCGGTCTTTAAT+GGG 0.321567 1.2:-45209298 MS.gene055694:CDS
CTCTATGGATTGTGGTTTAT+GGG 0.322048 1.2:-45209162 MS.gene055694:CDS
CTTGGTCTGAAGCTTATATA+TGG 0.327845 1.2:-45209544 MS.gene055694:CDS
TGTTGTTGCATTTGATTTAG+TGG 0.338010 1.2:-45209231 MS.gene055694:CDS
ACGAGGATACAGTTGATATA+TGG 0.348085 1.2:-45209103 MS.gene055694:CDS
GAAGAGTCCTTGCTACAAAA+AGG 0.349090 1.2:+45209335 None:intergenic
AAACGAATTAGAGACTTAAC+TGG 0.356866 1.2:+45209872 None:intergenic
AAATCTATAGATCGAAATTC+AGG 0.360952 1.2:+45209692 None:intergenic
TGATATTAACTATCGCTCTA+TGG 0.363168 1.2:-45209177 MS.gene055694:CDS
AGGTTGAAACTGTGAATTTA+CGG 0.371805 1.2:+45209742 None:intergenic
ATTTCTAAGTCTATGGGTTA+TGG 0.375932 1.2:-45209129 MS.gene055694:CDS
GAGCGATAGTTAATATCATC+TGG 0.377454 1.2:+45209182 None:intergenic
ACTTAACTGGTAACCTCAAT+AGG 0.380487 1.2:+45209885 None:intergenic
AAACTTAAATGTGAAGCATT+AGG 0.385926 1.2:+45209482 None:intergenic
TGTGGTTTATGGGTATTTAG+AGG 0.386481 1.2:-45209152 MS.gene055694:CDS
TATTGCAAAGATTCACGAAA+TGG 0.390999 1.2:-45208900 MS.gene055694:CDS
TCTTTAATGGGGCTATTCAC+TGG 0.398766 1.2:-45209286 MS.gene055694:CDS
AGAAGATCAAAATGAGATTC+CGG 0.400161 1.2:+45209605 None:intergenic
AATATAAAGTGCAGTCATCT+TGG 0.407444 1.2:-45209070 MS.gene055694:CDS
GTGAAGAGTGTTGGAGAGGA+AGG 0.412229 1.2:+45209722 None:intergenic
AAACTAGGTTTCAGTGGAAC+AGG 0.414275 1.2:+45209635 None:intergenic
TCTCATTGAGGGCTAATGAA+TGG 0.422049 1.2:-45209385 MS.gene055694:CDS
TGGTAACCTCAATAGGATTT+GGG 0.426523 1.2:+45209892 None:intergenic
GGAAATTATGGCGGAGGTGG+TGG 0.432088 1.2:-45209942 MS.gene055694:CDS
CTCATTGAGGGCTAATGAAT+GGG 0.432737 1.2:-45209384 MS.gene055694:CDS
AGGAAGAAGCATGGCGGAGG+TGG 0.432937 1.2:-45209966 None:intergenic
TAAGCTTCCTCGTCGTCACT+AGG 0.442156 1.2:+45208837 None:intergenic
ATTAAAGACCGACTCTACTA+AGG 0.448181 1.2:+45209301 None:intergenic
TCAAAATGAGATTCCGGAAG+TGG 0.451896 1.2:+45209611 None:intergenic
AAGAAGCATGGCGGAGGTGG+CGG 0.454585 1.2:-45209963 None:intergenic
TAATGGGGCTATTCACTGGT+TGG 0.454880 1.2:-45209282 MS.gene055694:CDS
ATATTGTTGGAACAGATTGC+CGG 0.467153 1.2:-45208974 MS.gene055694:CDS
CGAGGATACAGTTGATATAT+GGG 0.469153 1.2:-45209102 MS.gene055694:CDS
GGCGGAAATTATGGCGGAGG+TGG 0.471010 1.2:-45209945 MS.gene055694:CDS
CGAGTCAACAGATGATTACT+TGG 0.478220 1.2:-45209441 MS.gene055694:CDS
TGTTTATCCCTTAGTAGAGT+CGG 0.481767 1.2:-45209309 MS.gene055694:CDS
TCAAATCCGTTTGTAAGTCA+TGG 0.484548 1.2:-45209850 MS.gene055694:CDS
GGAGTAGCGGTGAAGAGTGT+TGG 0.488300 1.2:+45209713 None:intergenic
GTTGGAACAGATTGCCGGAC+TGG 0.489944 1.2:-45208969 MS.gene055694:CDS
AGGTATTTGTCTATGAAATC+CGG 0.492203 1.2:+45209511 None:intergenic
TAGAGGATTTCTAAGTCTAT+GGG 0.497173 1.2:-45209135 MS.gene055694:CDS
AACTATCGCTCTATGGATTG+TGG 0.498006 1.2:-45209170 MS.gene055694:CDS
ATTTGGGTGATCAATTCATC+AGG 0.500913 1.2:+45209908 None:intergenic
ATCAATTCATCAGGCAGATA+CGG 0.511263 1.2:+45209917 None:intergenic
CTAATTAAAGGTTCATGTAG+AGG 0.512584 1.2:-45209584 MS.gene055694:CDS
TCAGTTTCGTTTGATTACTT+GGG 0.513793 1.2:-45209413 MS.gene055694:CDS
TAATTAAAGGTTCATGTAGA+GGG 0.518546 1.2:-45209583 MS.gene055694:CDS
TGATCACCCAAATCCTATTG+AGG 0.519752 1.2:-45209898 MS.gene055694:CDS
CCTACGAGTGTGTGTTGAAG+AGG 0.520587 1.2:+45209778 None:intergenic
GATTCCGGAAGTGGAAAACT+AGG 0.521335 1.2:+45209620 None:intergenic
TACAAGGGAAACGTTATGAA+TGG 0.533084 1.2:+45209016 None:intergenic
CTTAAATGTGAAGCATTAGG+AGG 0.535227 1.2:+45209485 None:intergenic
TGTGAAGCATTAGGAGGGAA+AGG 0.535589 1.2:+45209491 None:intergenic
AGCGGTGAAGAGTGTTGGAG+AGG 0.537722 1.2:+45209718 None:intergenic
TTGCATTTGATTTAGTGGAA+AGG 0.543544 1.2:-45209226 MS.gene055694:CDS
TGTCTATGAAATCCGGTGGA+TGG 0.546054 1.2:+45209518 None:intergenic
GTCAACAGATGATTACTTGG+TGG 0.548203 1.2:-45209438 MS.gene055694:CDS
TTCACGAAATGGATTCCGAT+TGG 0.548703 1.2:-45208889 MS.gene055694:CDS
CGTATCTCACCAATCCAGTC+CGG 0.551239 1.2:+45208955 None:intergenic
ATGGGAAGAAATCGTGGATA+CGG 0.551708 1.2:-45209366 MS.gene055694:CDS
AGAAAACCATGACTTACAAA+CGG 0.552831 1.2:+45209844 None:intergenic
CGGAGGAAGAAGCATGGCGG+AGG 0.558746 1.2:-45209969 None:intergenic
TTAAAGACCGACTCTACTAA+GGG 0.568134 1.2:+45209302 None:intergenic
AAGCTTCCTCGTCGTCACTA+GGG 0.568376 1.2:+45208838 None:intergenic
AACAGATTGCCGGACTGGAT+TGG 0.572282 1.2:-45208964 MS.gene055694:CDS
ACTCTGTATACATAGCCAAT+CGG 0.573189 1.2:+45208874 None:intergenic
TTGGTGAGATACGATGAGGA+AGG 0.592631 1.2:-45208945 MS.gene055694:CDS
TCTAAGTCTATGGGTTATGG+TGG 0.598732 1.2:-45209126 MS.gene055694:CDS
GGTGGCGGAAATTATGGCGG+AGG 0.599392 1.2:-45209948 MS.gene055694:CDS
TATATATGGAATCCATCCAC+CGG 0.611591 1.2:-45209530 MS.gene055694:CDS
AGCGATAGTTAATATCATCT+GGG 0.612843 1.2:+45209183 None:intergenic
TAGTTAATATCATCTGGGAG+AGG 0.613889 1.2:+45209188 None:intergenic
TCTATGGGTTATGGTGGACG+AGG 0.618503 1.2:-45209120 MS.gene055694:CDS
AGTGGAAAACTAGGTTTCAG+TGG 0.624922 1.2:+45209629 None:intergenic
AGTAGAGTCGGTCTTTAATG+GGG 0.625463 1.2:-45209297 MS.gene055694:CDS
TTAAATGTGAAGCATTAGGA+GGG 0.627505 1.2:+45209486 None:intergenic
AGGTTCATTATAATCATCGT+AGG 0.630185 1.2:+45209655 None:intergenic
TCATCGTAGGTAAACAATGA+CGG 0.630499 1.2:+45209668 None:intergenic
CCTCTTCAACACACACTCGT+AGG 0.637744 1.2:-45209778 MS.gene055694:CDS
AGATCGAAATTCAGGAGTAG+CGG 0.644050 1.2:+45209700 None:intergenic
TATTTGTCTATGAAATCCGG+TGG 0.647593 1.2:+45209514 None:intergenic
GGAGGTGGCGGAAATTATGG+CGG 0.679092 1.2:-45209951 MS.gene055694:CDS
TAATGAATGGGAAGAAATCG+TGG 0.683513 1.2:-45209372 MS.gene055694:CDS
TGGATTGGTGAGATACGATG+AGG 0.700356 1.2:-45208949 MS.gene055694:CDS
TTCACTCCCTAGTGACGACG+AGG 0.713467 1.2:-45208844 MS.gene055694:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAAGTTTTTTTGGTTTT+GGG - chr1.2:45209323-45209342 MS.gene055694:CDS 15.0%
!!! CATTTAAGTTTTTTTGGTTT+TGG - chr1.2:45209322-45209341 MS.gene055694:CDS 20.0%
!!! CATTTTGATCTTCTAATTAA+AGG - chr1.2:45209196-45209215 MS.gene055694:CDS 20.0%
! AAATCTATAGATCGAAATTC+AGG + chr1.2:45209103-45209122 None:intergenic 25.0%
! TAATTAAAGGTTCATGTAGA+GGG - chr1.2:45209209-45209228 MS.gene055694:CDS 25.0%
!! AAACTTAAATGTGAAGCATT+AGG + chr1.2:45209313-45209332 None:intergenic 25.0%
!!! GCTTCACATTTAAGTTTTTT+TGG - chr1.2:45209316-45209335 MS.gene055694:CDS 25.0%
AAACGAATTAGAGACTTAAC+TGG + chr1.2:45208923-45208942 None:intergenic 30.0%
AATATAAAGTGCAGTCATCT+TGG - chr1.2:45209722-45209741 MS.gene055694:CDS 30.0%
ACAAAAAGTGGTGATATTGT+TGG - chr1.2:45209805-45209824 MS.gene055694:CDS 30.0%
AGAAAACCATGACTTACAAA+CGG + chr1.2:45208951-45208970 None:intergenic 30.0%
AGAAGATCAAAATGAGATTC+CGG + chr1.2:45209190-45209209 None:intergenic 30.0%
AGCGATAGTTAATATCATCT+GGG + chr1.2:45209612-45209631 None:intergenic 30.0%
AGGTATTTGTCTATGAAATC+CGG + chr1.2:45209284-45209303 None:intergenic 30.0%
AGGTTCATTATAATCATCGT+AGG + chr1.2:45209140-45209159 None:intergenic 30.0%
AGGTTGAAACTGTGAATTTA+CGG + chr1.2:45209053-45209072 None:intergenic 30.0%
CTAATTAAAGGTTCATGTAG+AGG - chr1.2:45209208-45209227 MS.gene055694:CDS 30.0%
TAGAGGATTTCTAAGTCTAT+GGG - chr1.2:45209657-45209676 MS.gene055694:CDS 30.0%
TATTGCAAAGATTCACGAAA+TGG - chr1.2:45209892-45209911 MS.gene055694:CDS 30.0%
TCAGTTTCGTTTGATTACTT+GGG - chr1.2:45209379-45209398 MS.gene055694:CDS 30.0%
TGATATTAACTATCGCTCTA+TGG - chr1.2:45209615-45209634 MS.gene055694:CDS 30.0%
TTAGAGGATTTCTAAGTCTA+TGG - chr1.2:45209656-45209675 MS.gene055694:CDS 30.0%
TTCAGTTTCGTTTGATTACT+TGG - chr1.2:45209378-45209397 MS.gene055694:CDS 30.0%
! ACTTTTTGTGCAACATACAA+GGG + chr1.2:45209794-45209813 None:intergenic 30.0%
! ATTTCTAAGTCTATGGGTTA+TGG - chr1.2:45209663-45209682 MS.gene055694:CDS 30.0%
! TGTTGTTGCATTTGATTTAG+TGG - chr1.2:45209561-45209580 MS.gene055694:CDS 30.0%
! TTAAATGTGAAGCATTAGGA+GGG + chr1.2:45209309-45209328 None:intergenic 30.0%
! TTGCATTTGATTTAGTGGAA+AGG - chr1.2:45209566-45209585 MS.gene055694:CDS 30.0%
!! GGTTTATATTTTTGCACACT+TGG - chr1.2:45209230-45209249 MS.gene055694:CDS 30.0%
ACTCTGTATACATAGCCAAT+CGG + chr1.2:45209921-45209940 None:intergenic 35.0%
ACTTAACTGGTAACCTCAAT+AGG + chr1.2:45208910-45208929 None:intergenic 35.0%
ATATTGTTGGAACAGATTGC+CGG - chr1.2:45209818-45209837 MS.gene055694:CDS 35.0%
ATCAATTCATCAGGCAGATA+CGG + chr1.2:45208878-45208897 None:intergenic 35.0%
ATTTGGGTGATCAATTCATC+AGG + chr1.2:45208887-45208906 None:intergenic 35.0%
CTTGTATGTTGCACAAAAAG+TGG - chr1.2:45209793-45209812 MS.gene055694:CDS 35.0%
GAGCGATAGTTAATATCATC+TGG + chr1.2:45209613-45209632 None:intergenic 35.0%
TAATGAATGGGAAGAAATCG+TGG - chr1.2:45209420-45209439 MS.gene055694:CDS 35.0%
TACAAGGGAAACGTTATGAA+TGG + chr1.2:45209779-45209798 None:intergenic 35.0%
TAGTAGAGTCGGTCTTTAAT+GGG - chr1.2:45209494-45209513 MS.gene055694:CDS 35.0%
TAGTTAATATCATCTGGGAG+AGG + chr1.2:45209607-45209626 None:intergenic 35.0%
TATATATGGAATCCATCCAC+CGG - chr1.2:45209262-45209281 MS.gene055694:CDS 35.0%
TATTTGTCTATGAAATCCGG+TGG + chr1.2:45209281-45209300 None:intergenic 35.0%
TCAAATCCGTTTGTAAGTCA+TGG - chr1.2:45208942-45208961 MS.gene055694:CDS 35.0%
TCATCGTAGGTAAACAATGA+CGG + chr1.2:45209127-45209146 None:intergenic 35.0%
TGGTAACCTCAATAGGATTT+GGG + chr1.2:45208903-45208922 None:intergenic 35.0%
TGTGGTTTATGGGTATTTAG+AGG - chr1.2:45209640-45209659 MS.gene055694:CDS 35.0%
TGTTTATCCCTTAGTAGAGT+CGG - chr1.2:45209483-45209502 MS.gene055694:CDS 35.0%
TTAGTAGAGTCGGTCTTTAA+TGG - chr1.2:45209493-45209512 MS.gene055694:CDS 35.0%
! ACGAGGATACAGTTGATATA+TGG - chr1.2:45209689-45209708 MS.gene055694:CDS 35.0%
! ATTAAAGACCGACTCTACTA+AGG + chr1.2:45209494-45209513 None:intergenic 35.0%
! CGAGGATACAGTTGATATAT+GGG - chr1.2:45209690-45209709 MS.gene055694:CDS 35.0%
! CTCTATGGATTGTGGTTTAT+GGG - chr1.2:45209630-45209649 MS.gene055694:CDS 35.0%
! CTTAAATGTGAAGCATTAGG+AGG + chr1.2:45209310-45209329 None:intergenic 35.0%
! CTTGGTCTGAAGCTTATATA+TGG - chr1.2:45209248-45209267 MS.gene055694:CDS 35.0%
! TTAAAGACCGACTCTACTAA+GGG + chr1.2:45209493-45209512 None:intergenic 35.0%
!! CACTTTTTGTGCAACATACA+AGG + chr1.2:45209795-45209814 None:intergenic 35.0%
!!! ACTTGGGTTTTTTCTCATTG+AGG - chr1.2:45209395-45209414 MS.gene055694:CDS 35.0%
!!! CTTGGGTTTTTTCTCATTGA+GGG - chr1.2:45209396-45209415 MS.gene055694:CDS 35.0%
AAACTAGGTTTCAGTGGAAC+AGG + chr1.2:45209160-45209179 None:intergenic 40.0%
AGATCGAAATTCAGGAGTAG+CGG + chr1.2:45209095-45209114 None:intergenic 40.0%
AGTAGAGTCGGTCTTTAATG+GGG - chr1.2:45209495-45209514 MS.gene055694:CDS 40.0%
AGTGGAAAACTAGGTTTCAG+TGG + chr1.2:45209166-45209185 None:intergenic 40.0%
ATGGGAAGAAATCGTGGATA+CGG - chr1.2:45209426-45209445 MS.gene055694:CDS 40.0%
CCTTGCTACAAAAAGGCAAA+TGG + chr1.2:45209453-45209472 None:intergenic 40.0%
CGAGTCAACAGATGATTACT+TGG - chr1.2:45209351-45209370 MS.gene055694:CDS 40.0%
CTCATTGAGGGCTAATGAAT+GGG - chr1.2:45209408-45209427 MS.gene055694:CDS 40.0%
CTGGTAACCTCAATAGGATT+TGG + chr1.2:45208904-45208923 None:intergenic 40.0%
GAAGAGTCCTTGCTACAAAA+AGG + chr1.2:45209460-45209479 None:intergenic 40.0%
GTCAACAGATGATTACTTGG+TGG - chr1.2:45209354-45209373 MS.gene055694:CDS 40.0%
TCAAAATGAGATTCCGGAAG+TGG + chr1.2:45209184-45209203 None:intergenic 40.0%
TCTCATTGAGGGCTAATGAA+TGG - chr1.2:45209407-45209426 MS.gene055694:CDS 40.0%
TCTTTAATGGGGCTATTCAC+TGG - chr1.2:45209506-45209525 MS.gene055694:CDS 40.0%
TGATCACCCAAATCCTATTG+AGG - chr1.2:45208894-45208913 MS.gene055694:CDS 40.0%
! AACTATCGCTCTATGGATTG+TGG - chr1.2:45209622-45209641 MS.gene055694:CDS 40.0%
! CCATTTGCCTTTTTGTAGCA+AGG - chr1.2:45209450-45209469 MS.gene055694:CDS 40.0%
! GCTCTATGGATTGTGGTTTA+TGG - chr1.2:45209629-45209648 MS.gene055694:CDS 40.0%
! TCTAAGTCTATGGGTTATGG+TGG - chr1.2:45209666-45209685 MS.gene055694:CDS 40.0%
! TTCACGAAATGGATTCCGAT+TGG - chr1.2:45209903-45209922 MS.gene055694:CDS 40.0%
!! GAAACCTAGTTTTCCACTTC+CGG - chr1.2:45209168-45209187 MS.gene055694:CDS 40.0%
GATTCCGGAAGTGGAAAACT+AGG + chr1.2:45209175-45209194 None:intergenic 45.0%
TAATGGGGCTATTCACTGGT+TGG - chr1.2:45209510-45209529 MS.gene055694:CDS 45.0%
TGTCTATGAAATCCGGTGGA+TGG + chr1.2:45209277-45209296 None:intergenic 45.0%
TTGGTGAGATACGATGAGGA+AGG - chr1.2:45209847-45209866 MS.gene055694:CDS 45.0%
! TGTGAAGCATTAGGAGGGAA+AGG + chr1.2:45209304-45209323 None:intergenic 45.0%
!! TGGATTGGTGAGATACGATG+AGG - chr1.2:45209843-45209862 MS.gene055694:CDS 45.0%
AAGCTTCCTCGTCGTCACTA+GGG + chr1.2:45209957-45209976 None:intergenic 50.0%
CCTACGAGTGTGTGTTGAAG+AGG + chr1.2:45209017-45209036 None:intergenic 50.0%
CCTCTTCAACACACACTCGT+AGG - chr1.2:45209014-45209033 MS.gene055694:CDS 50.0%
CGTATCTCACCAATCCAGTC+CGG + chr1.2:45209840-45209859 None:intergenic 50.0%
TAAGCTTCCTCGTCGTCACT+AGG + chr1.2:45209958-45209977 None:intergenic 50.0%
! AACAGATTGCCGGACTGGAT+TGG - chr1.2:45209828-45209847 MS.gene055694:CDS 50.0%
!! GTGAAGAGTGTTGGAGAGGA+AGG + chr1.2:45209073-45209092 None:intergenic 50.0%
!! TCTATGGGTTATGGTGGACG+AGG - chr1.2:45209672-45209691 MS.gene055694:CDS 50.0%
GTTGGAACAGATTGCCGGAC+TGG - chr1.2:45209823-45209842 MS.gene055694:CDS 55.0%
TTCACTCCCTAGTGACGACG+AGG - chr1.2:45209948-45209967 MS.gene055694:CDS 55.0%
! GGAAATTATGGCGGAGGTGG+TGG - chr1.2:45208850-45208869 MS.gene055694:CDS 55.0%
! GGAGTAGCGGTGAAGAGTGT+TGG + chr1.2:45209082-45209101 None:intergenic 55.0%
!! AGCGGTGAAGAGTGTTGGAG+AGG + chr1.2:45209077-45209096 None:intergenic 55.0%
!! GGAGGTGGCGGAAATTATGG+CGG - chr1.2:45208841-45208860 MS.gene055694:CDS 55.0%
! GGCGGAAATTATGGCGGAGG+TGG - chr1.2:45208847-45208866 MS.gene055694:CDS 60.0%
!! GGCGGAGGTGGCGGAAATTA+TGG - chr1.2:45208838-45208857 MS.gene055694:CDS 60.0%
!! GGTGGCGGAAATTATGGCGG+AGG - chr1.2:45208844-45208863 MS.gene055694:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 45208836 45209978 45208836 ID=MS.gene055694
chr1.2 mRNA 45208836 45209978 45208836 ID=MS.gene055694.t1;Parent=MS.gene055694
chr1.2 exon 45208836 45209978 45208836 ID=MS.gene055694.t1.exon1;Parent=MS.gene055694.t1
chr1.2 CDS 45208836 45209978 45208836 ID=cds.MS.gene055694.t1;Parent=MS.gene055694.t1
Gene Sequence

>MS.gene055694

ATGGCGGAGGTGGCGGAAATTATGGCGGAGGTGGTGGAACCGTATCTGCCTGATGAATTGATCACCCAAATCCTATTGAGGTTACCAGTTAAGTCTCTAATTCGTTTCAAATCCGTTTGTAAGTCATGGTTTTCTCTTATCTCTGATAATCACTTTGCAAATTCACATTTTCAACTTACCTCTTCAACACACACTCGTAGGATTCTTTTCTTAACCGTAAATTCACAGTTTCAACCTTCCTCTCCAACACTCTTCACCGCTACTCCTGAATTTCGATCTATAGATTTACCGTCATTGTTTACCTACGATGATTATAATGAACCTGTTCCACTGAAACCTAGTTTTCCACTTCCGGAATCTCATTTTGATCTTCTAATTAAAGGTTCATGTAGAGGGTTTATATTTTTGCACACTTGGTCTGAAGCTTATATATGGAATCCATCCACCGGATTTCATAGACAAATACCTTTCCCTCCTAATGCTTCACATTTAAGTTTTTTTGGTTTTGGGTATGACGAGTCAACAGATGATTACTTGGTGGTTTCAGTTTCGTTTGATTACTTGGGTTTTTTCTCATTGAGGGCTAATGAATGGGAAGAAATCGTGGATACGGTCCATTTGCCTTTTTGTAGCAAGGACTCTTCTTTTGTTTATCCCTTAGTAGAGTCGGTCTTTAATGGGGCTATTCACTGGTTGGCTTTACGTCTTGATACACGTGACTATCTTGTTGTTGCATTTGATTTAGTGGAAAGGAAACTTGTAGAGATTCCTCTCCCAGATGATATTAACTATCGCTCTATGGATTGTGGTTTATGGGTATTTAGAGGATTTCTAAGTCTATGGGTTATGGTGGACGAGGATACAGTTGATATATGGGTAATGAAAGAATATAAAGTGCAGTCATCTTGGACTAAAACTCTTGTTCTTACTACTTATGATACCATTCATAACGTTTCCCTTGTATGTTGCACAAAAAGTGGTGATATTGTTGGAACAGATTGCCGGACTGGATTGGTGAGATACGATGAGGAAGGAGAGTTCATAGAGCATTTCTACTATTGCAAAGATTCACGAAATGGATTCCGATTGGCTATGTATACAGAGTCTTTGCTTTCACTCCCTAGTGACGACGAGGAAGCTTAA

Protein sequence

>MS.gene055694.t1

MAEVAEIMAEVVEPYLPDELITQILLRLPVKSLIRFKSVCKSWFSLISDNHFANSHFQLTSSTHTRRILFLTVNSQFQPSSPTLFTATPEFRSIDLPSLFTYDDYNEPVPLKPSFPLPESHFDLLIKGSCRGFIFLHTWSEAYIWNPSTGFHRQIPFPPNASHLSFFGFGYDESTDDYLVVSVSFDYLGFFSLRANEWEEIVDTVHLPFCSKDSSFVYPLVESVFNGAIHWLALRLDTRDYLVVAFDLVERKLVEIPLPDDINYRSMDCGLWVFRGFLSLWVMVDEDTVDIWVMKEYKVQSSWTKTLVLTTYDTIHNVSLVCCTKSGDIVGTDCRTGLVRYDEEGEFIEHFYYCKDSRNGFRLAMYTESLLSLPSDDEEA