AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene071237

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071237.t1 MTR_3g052480 95.254 295 12 1 1 293 1 295 0.0 570
MS.gene071237.t1 MTR_3g052490 83.729 295 44 3 1 293 1 293 1.52e-176 492
MS.gene071237.t1 MTR_3g052580 71.478 291 78 4 5 293 1 288 1.02e-148 422
MS.gene071237.t1 MTR_3g052580 72.792 283 74 3 11 293 8 287 2.46e-148 422
MS.gene071237.t1 MTR_5g093090 64.846 293 99 2 1 293 1 289 1.04e-137 391
MS.gene071237.t1 MTR_5g093090 64.846 293 99 2 1 293 1 289 1.10e-136 390
MS.gene071237.t1 MTR_5g093090 65.238 210 70 1 1 210 1 207 2.46e-92 273
MS.gene071237.t1 MTR_8g074570 36.934 287 168 7 15 293 16 297 5.64e-51 172
MS.gene071237.t1 MTR_4g122200 34.983 303 176 8 1 293 3 294 6.40e-50 169
MS.gene071237.t1 MTR_2g033930 35.662 272 158 7 28 293 29 289 8.52e-50 169
MS.gene071237.t1 MTR_2g033920 35.932 295 172 6 6 293 10 294 1.48e-49 167
MS.gene071237.t1 MTR_2g033920 35.932 295 172 6 6 293 10 294 8.30e-49 166
MS.gene071237.t1 MTR_5g078210 34.397 282 165 6 20 293 14 283 1.01e-48 165
MS.gene071237.t1 MTR_8g074560 35.766 274 161 7 25 289 25 292 1.52e-48 166
MS.gene071237.t1 MTR_5g078210 34.397 282 165 6 20 293 14 283 2.45e-48 164
MS.gene071237.t1 MTR_0565s0010 36.877 301 169 9 1 293 4 291 9.79e-48 163
MS.gene071237.t1 MTR_1g079540 36.823 277 159 6 1 270 1 268 1.71e-47 163
MS.gene071237.t1 MTR_4g108690 34.082 267 161 7 33 293 29 286 3.91e-47 162
MS.gene071237.t1 MTR_7g116570 35.249 261 153 6 11 262 10 263 7.93e-46 158
MS.gene071237.t1 MTR_3g435540 34.457 267 160 6 33 293 25 282 1.98e-45 157
MS.gene071237.t1 MTR_8g079050 39.194 273 138 11 10 263 10 273 2.55e-45 157
MS.gene071237.t1 MTR_1g024890 36.328 256 151 5 17 267 18 266 3.03e-45 157
MS.gene071237.t1 MTR_3g005650 37.722 281 161 6 16 293 15 284 4.38e-45 156
MS.gene071237.t1 MTR_8g074580 34.437 302 184 7 2 293 7 304 1.21e-44 156
MS.gene071237.t1 MTR_1g079530 35.315 286 168 8 5 281 1 278 1.82e-44 155
MS.gene071237.t1 MTR_8g087890 36.424 302 158 11 8 293 6 289 4.02e-44 154
MS.gene071237.t1 MTR_3g024510 35.959 292 166 9 13 293 15 296 8.84e-44 153
MS.gene071237.t1 MTR_2g461580 35.473 296 175 11 1 290 1 286 2.78e-43 151
MS.gene071237.t1 MTR_3g021460 36.882 263 151 9 11 267 11 264 4.62e-43 150
MS.gene071237.t1 MTR_4g035353 32.609 276 171 6 24 293 24 290 1.98e-42 149
MS.gene071237.t1 MTR_2g084585 34.507 284 171 8 10 287 8 282 3.26e-42 149
MS.gene071237.t1 MTR_2g044100 35.424 271 153 7 31 293 43 299 1.08e-41 148
MS.gene071237.t1 MTR_3g098270 32.895 304 185 9 1 293 1 296 8.98e-41 145
MS.gene071237.t1 MTR_0009s0250 36.330 267 149 9 25 285 27 278 9.31e-41 145
MS.gene071237.t1 MTR_3g023220 37.302 252 137 7 26 270 28 265 2.64e-40 144
MS.gene071237.t1 MTR_1g069175 34.836 244 145 6 31 267 33 269 2.70e-39 141
MS.gene071237.t1 MTR_8g087870 32.963 270 159 8 11 271 7 263 6.66e-39 140
MS.gene071237.t1 MTR_6g021530 33.977 259 155 9 12 261 7 258 1.33e-38 139
MS.gene071237.t1 MTR_7g116520 37.850 214 121 5 31 240 34 239 5.78e-38 138
MS.gene071237.t1 MTR_7g116500 32.593 270 165 7 31 293 33 292 6.04e-38 137
MS.gene071237.t1 MTR_4g087985 32.069 290 177 7 11 288 16 297 2.19e-37 136
MS.gene071237.t1 MTR_3g464730 32.632 285 173 9 3 281 2 273 9.97e-37 134
MS.gene071237.t1 MTR_2g015080 33.115 305 180 9 7 293 8 306 1.05e-36 134
MS.gene071237.t1 MTR_5g009100 32.463 268 164 6 33 293 48 305 1.29e-36 134
MS.gene071237.t1 MTR_5g074270 35.833 240 140 6 28 261 30 261 1.58e-36 134
MS.gene071237.t1 MTR_1g079590 40.782 179 93 4 5 183 11 176 2.04e-36 129
MS.gene071237.t1 MTR_5g084770 34.538 249 146 7 29 271 26 263 2.21e-36 133
MS.gene071237.t1 MTR_1g025780 33.779 299 177 8 7 293 9 298 4.42e-36 132
MS.gene071237.t1 MTR_8g075230 34.043 282 168 8 19 293 24 294 7.41e-36 132
MS.gene071237.t1 MTR_4g019880 32.550 298 181 8 5 293 7 293 8.19e-36 132
MS.gene071237.t1 MTR_8g014910 32.616 279 173 8 17 289 17 286 1.08e-35 131
MS.gene071237.t1 MTR_7g008060 30.872 298 173 10 3 293 8 279 1.38e-35 131
MS.gene071237.t1 MTR_3g082830 33.333 252 154 7 24 271 31 272 1.41e-35 131
MS.gene071237.t1 MTR_5g084750 31.690 284 176 8 13 287 8 282 2.21e-35 130
MS.gene071237.t1 MTR_1g025760 31.715 309 184 10 1 293 42 339 2.28e-35 131
MS.gene071237.t1 MTR_7g116510 30.303 297 185 7 7 293 1 285 2.91e-35 130
MS.gene071237.t1 MTR_4g056160 35.021 237 140 6 29 259 25 253 8.58e-35 129
MS.gene071237.t1 MTR_4g056280 34.981 263 157 7 30 287 29 282 1.04e-34 129
MS.gene071237.t1 MTR_3g005660 33.871 248 144 8 25 262 30 267 1.50e-34 129
MS.gene071237.t1 MTR_5g084790 34.127 252 151 7 26 271 27 269 4.23e-34 127
MS.gene071237.t1 MTR_1g025720 34.572 269 162 7 30 293 36 295 6.04e-34 127
MS.gene071237.t1 MTR_2g017955 32.967 273 155 10 7 264 4 263 9.46e-34 127
MS.gene071237.t1 MTR_2g017875 32.283 254 155 8 25 270 28 272 1.08e-33 126
MS.gene071237.t1 MTR_1g025700 33.582 268 166 6 30 293 49 308 2.08e-33 125
MS.gene071237.t1 MTR_5g022630 33.091 275 166 8 27 293 39 303 2.54e-33 125
MS.gene071237.t1 MTR_2g017965 31.852 270 163 8 7 264 4 264 5.05e-33 125
MS.gene071237.t1 MTR_2g017925 31.599 269 162 9 8 264 5 263 6.03e-33 124
MS.gene071237.t1 MTR_1g025680 35.401 274 156 7 29 293 32 293 8.11e-33 125
MS.gene071237.t1 MTR_2g100620 32.852 277 169 8 21 289 18 285 9.54e-33 124
MS.gene071237.t1 MTR_5g022640 32.558 301 172 11 10 293 16 302 1.39e-31 120
MS.gene071237.t1 MTR_8g031390 32.566 304 171 10 6 293 1 286 4.00e-30 116
MS.gene071237.t1 MTR_8g031390 32.566 304 171 10 6 293 1 286 1.07e-29 116
MS.gene071237.t1 MTR_2g017915 33.906 233 128 8 7 226 4 223 2.28e-29 114
MS.gene071237.t1 MTR_8g031430 33.681 288 165 9 11 289 13 283 2.29e-29 115
MS.gene071237.t1 MTR_8g031420 32.517 286 169 10 11 289 13 281 6.63e-29 113
MS.gene071237.t1 MTR_8g075220 31.900 279 161 10 30 293 39 303 8.64e-29 113
MS.gene071237.t1 MTR_3g114090 33.577 274 159 9 30 293 35 295 8.78e-29 113
MS.gene071237.t1 MTR_8g022810 30.483 269 168 8 31 293 41 296 1.65e-28 112
MS.gene071237.t1 MTR_8g075200 30.483 269 173 7 30 293 40 299 1.99e-28 113
MS.gene071237.t1 MTR_8g022790 29.348 276 171 8 27 293 33 293 1.23e-27 110
MS.gene071237.t1 MTR_5g083040 29.749 279 172 8 28 293 29 296 2.45e-27 109
MS.gene071237.t1 MTR_3g114120 32.963 270 153 11 30 287 46 299 3.56e-26 106
MS.gene071237.t1 MTR_8g022810 33.014 209 125 6 31 236 41 237 6.50e-25 102
MS.gene071237.t1 MTR_8g031400 30.479 292 177 9 11 293 13 287 6.53e-24 100
MS.gene071237.t1 MTR_2g018015 33.036 224 129 8 22 233 27 241 4.56e-23 96.7
MS.gene071237.t1 MTR_1g025910 30.855 269 151 10 36 289 41 289 5.18e-23 97.8
MS.gene071237.t1 MTR_4g036375 34.132 167 98 5 16 178 12 170 6.90e-23 93.6
MS.gene071237.t1 MTR_7g033150 29.825 285 158 11 31 290 35 302 8.94e-22 94.4
MS.gene071237.t1 MTR_6g007090 31.469 286 150 12 30 292 38 300 9.82e-22 94.4
MS.gene071237.t1 MTR_7g033165 28.622 283 162 12 30 290 32 296 3.24e-21 91.7
MS.gene071237.t1 MTR_2g087292 53.465 101 41 3 25 125 27 121 3.52e-21 91.3
MS.gene071237.t1 MTR_7g033165 28.622 283 162 12 30 290 32 296 1.58e-20 90.9
MS.gene071237.t1 MTR_1g030268 29.893 281 163 11 30 293 39 302 4.78e-20 89.0
MS.gene071237.t1 MTR_1g092740 31.349 252 145 12 32 280 39 265 9.90e-20 88.2
MS.gene071237.t1 MTR_1g030268 29.893 281 163 11 30 293 39 302 1.23e-19 88.2
MS.gene071237.t1 MTR_7g033155 27.027 296 163 11 31 290 38 316 7.26e-19 86.3
MS.gene071237.t1 MTR_6g049220 47.872 94 43 2 30 123 29 116 1.42e-18 81.6
MS.gene071237.t1 MTR_1g030340 28.339 307 176 14 12 293 18 305 1.93e-18 85.1
MS.gene071237.t1 MTR_1g060490 27.675 271 164 10 29 293 35 279 2.26e-18 84.3
MS.gene071237.t1 MTR_1g092750 29.555 247 144 10 20 262 29 249 2.79e-18 84.0
MS.gene071237.t1 MTR_1g030275 28.571 287 159 10 30 293 38 301 3.43e-18 84.3
MS.gene071237.t1 MTR_1g092690 30.000 240 135 10 32 267 52 262 6.57e-18 83.2
MS.gene071237.t1 MTR_1g030230 27.431 288 163 10 29 293 30 294 7.70e-18 83.2
MS.gene071237.t1 MTR_1g092760 30.472 233 134 9 32 262 40 246 4.95e-17 80.5
MS.gene071237.t1 MTR_1g030220 27.660 282 166 11 31 293 40 302 6.28e-17 80.5
MS.gene071237.t1 MTR_8g038680 30.070 286 158 12 30 292 27 293 6.51e-17 80.5
MS.gene071237.t1 MTR_6g007095 28.819 288 155 12 30 292 40 302 3.08e-16 79.3
MS.gene071237.t1 MTR_6g007095 28.622 283 155 13 35 292 369 629 2.68e-15 76.3
MS.gene071237.t1 MTR_7g116870 25.180 278 175 9 31 293 33 292 3.20e-16 78.6
MS.gene071237.t1 MTR_0127s0040 36.496 137 74 6 136 262 4 137 1.41e-15 74.7
MS.gene071237.t1 MTR_7g087190 28.054 221 119 9 30 232 42 240 2.76e-15 75.9
MS.gene071237.t1 MTR_3g438030 33.333 210 112 9 31 230 30 221 3.24e-15 75.5
MS.gene071237.t1 MTR_1g060500 27.239 268 168 11 32 293 41 287 1.05e-14 73.9
MS.gene071237.t1 MTR_3g069780 32.922 243 128 12 1 230 1 221 1.24e-14 73.6
MS.gene071237.t1 MTR_6g007100 26.837 313 180 16 4 292 3 290 1.26e-14 73.6
MS.gene071237.t1 MTR_2g079090 27.508 309 181 13 10 293 2 292 4.60e-14 72.0
MS.gene071237.t1 MTR_8g012540 29.514 288 153 14 30 290 27 291 6.58e-14 71.6
MS.gene071237.t1 MTR_3g463960 27.915 283 166 11 31 293 44 308 7.21e-14 71.6
MS.gene071237.t1 MTR_3g463950 27.915 283 166 11 31 293 44 308 7.21e-14 71.6
MS.gene071237.t1 MTR_3g463970 27.915 283 166 11 31 293 44 308 7.21e-14 71.6
MS.gene071237.t1 MTR_3g463940 27.915 283 166 11 31 293 44 308 7.21e-14 71.6
MS.gene071237.t1 MTR_2g079080 27.508 309 181 13 10 293 2 292 8.18e-14 71.2
MS.gene071237.t1 MTR_7g113860 25.267 281 176 9 30 293 34 297 2.93e-12 66.6
MS.gene071237.t1 MTR_8g028160 27.027 296 159 14 31 293 36 307 3.23e-12 66.6
MS.gene071237.t1 MTR_0029s0100 30.172 232 129 10 15 230 7 221 4.04e-12 66.2
MS.gene071237.t1 MTR_0029s0050 30.172 232 129 10 15 230 7 221 4.15e-12 66.2
MS.gene071237.t1 MTR_1g030265 27.706 231 130 9 84 293 53 267 7.26e-12 65.5
MS.gene071237.t1 MTR_2g015580 27.046 281 168 12 31 289 47 312 8.41e-12 65.5
MS.gene071237.t1 MTR_7g111780 24.399 291 165 11 26 293 31 289 1.61e-11 64.3
MS.gene071237.t1 MTR_3g448360 29.075 227 144 8 12 230 4 221 3.60e-11 63.5
MS.gene071237.t1 MTR_2g015650 30.870 230 130 12 17 230 10 226 7.13e-11 62.8
MS.gene071237.t1 MTR_4g104240 26.019 319 182 12 3 293 8 300 7.25e-11 62.8
MS.gene071237.t1 MTR_7g113860 24.555 281 178 9 30 293 28 291 7.95e-11 62.4
MS.gene071237.t1 MTR_6g081170 45.349 86 34 3 45 128 6 80 9.91e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071237.t1 AT5G55050 52.256 266 124 2 30 293 38 302 2.01e-85 261
MS.gene071237.t1 AT5G37690 36.803 269 150 6 33 293 29 285 5.47e-53 177
MS.gene071237.t1 AT5G37690 36.059 269 144 7 33 293 29 277 7.33e-48 163
MS.gene071237.t1 AT1G29660 36.770 291 158 10 15 293 14 290 8.63e-47 161
MS.gene071237.t1 AT3G50400 38.768 276 147 11 31 293 34 300 3.98e-46 159
MS.gene071237.t1 AT5G08460 32.119 302 183 7 4 293 21 312 5.75e-46 159
MS.gene071237.t1 AT1G74460 34.256 289 175 6 11 293 3 282 1.05e-43 153
MS.gene071237.t1 AT4G16230 37.657 239 132 7 17 247 16 245 1.81e-43 149
MS.gene071237.t1 AT1G29670 35.417 288 158 10 16 289 12 285 2.08e-41 147
MS.gene071237.t1 AT1G29670 35.417 288 158 10 16 289 80 353 1.03e-40 146
MS.gene071237.t1 AT2G23540 37.295 244 135 7 31 263 48 284 1.18e-40 145
MS.gene071237.t1 AT5G45670 34.768 302 168 10 7 293 1 288 1.24e-40 145
MS.gene071237.t1 AT5G18430 34.815 270 159 7 1 263 1 260 1.52e-40 144
MS.gene071237.t1 AT5G41890 32.990 291 172 7 1 280 1 279 4.83e-40 143
MS.gene071237.t1 AT2G03980 37.603 242 133 7 30 264 42 272 5.02e-40 143
MS.gene071237.t1 AT2G03980 37.603 242 133 7 30 264 42 272 5.02e-40 143
MS.gene071237.t1 AT2G03980 37.603 242 133 7 30 264 42 272 5.02e-40 143
MS.gene071237.t1 AT2G03980 37.603 242 133 7 30 264 42 272 5.02e-40 143
MS.gene071237.t1 AT1G20120 34.686 271 159 9 30 293 77 336 2.10e-39 142
MS.gene071237.t1 AT1G75920 35.417 288 160 9 18 293 16 289 2.71e-39 140
MS.gene071237.t1 AT4G18970 35.252 278 151 10 29 293 26 287 3.51e-39 141
MS.gene071237.t1 AT1G33811 32.131 305 173 10 13 293 4 298 5.58e-39 140
MS.gene071237.t1 AT4G18970 35.252 278 151 10 29 293 26 287 1.24e-38 140
MS.gene071237.t1 AT1G20132 34.672 274 161 9 27 293 57 319 4.75e-38 138
MS.gene071237.t1 AT3G04290 32.685 257 158 7 11 261 10 257 6.23e-38 137
MS.gene071237.t1 AT5G45960 33.457 269 160 9 31 289 47 306 7.49e-38 137
MS.gene071237.t1 AT3G14820 33.553 304 173 12 1 293 1 286 1.15e-37 137
MS.gene071237.t1 AT4G10950 31.618 272 169 6 29 293 69 330 1.61e-37 137
MS.gene071237.t1 AT3G53100 34.962 266 159 8 29 289 27 283 4.20e-37 135
MS.gene071237.t1 AT5G33370 34.034 238 145 5 31 263 30 260 4.91e-37 134
MS.gene071237.t1 AT1G75890 34.182 275 162 7 27 293 43 306 1.22e-36 134
MS.gene071237.t1 AT5G22810 35.088 285 165 10 12 286 14 288 1.40e-36 134
MS.gene071237.t1 AT1G71691 33.086 269 165 7 29 293 53 310 1.53e-36 132
MS.gene071237.t1 AT5G33370 34.034 238 145 5 31 263 30 260 1.54e-36 134
MS.gene071237.t1 AT1G75890 34.182 275 162 7 27 293 72 335 2.14e-36 134
MS.gene071237.t1 AT2G42990 32.740 281 171 8 17 292 14 281 3.10e-36 133
MS.gene071237.t1 AT2G40250 33.333 276 159 9 31 293 36 299 5.31e-36 132
MS.gene071237.t1 AT1G71691 33.086 269 165 7 29 293 53 310 8.52e-36 132
MS.gene071237.t1 AT4G28780 33.065 248 151 7 23 262 20 260 8.82e-36 132
MS.gene071237.t1 AT5G42170 35.055 271 155 10 30 293 49 305 1.09e-35 132
MS.gene071237.t1 AT1G75920 33.446 296 170 8 18 293 11 299 1.66e-35 131
MS.gene071237.t1 AT5G15720 37.295 244 127 9 30 260 29 259 1.99e-35 130
MS.gene071237.t1 AT2G04020 40.488 205 109 5 30 232 42 235 2.14e-35 128
MS.gene071237.t1 AT1G71250 31.985 272 170 6 28 293 38 300 6.31e-35 130
MS.gene071237.t1 AT3G16370 34.201 269 163 7 26 289 25 284 6.84e-35 129
MS.gene071237.t1 AT2G04020 40.488 205 109 5 30 232 42 235 7.22e-35 129
MS.gene071237.t1 AT1G75890 32.753 287 163 7 27 293 43 319 1.27e-34 129
MS.gene071237.t1 AT5G15720 37.143 245 128 9 29 260 28 259 1.43e-34 129
MS.gene071237.t1 AT4G30140 34.091 264 150 9 25 282 27 272 1.74e-34 128
MS.gene071237.t1 AT1G20135 31.707 287 171 9 17 293 15 286 2.35e-34 127
MS.gene071237.t1 AT5G03820 33.835 266 158 8 1 259 6 260 6.48e-34 127
MS.gene071237.t1 AT4G10950 31.250 272 166 7 29 293 69 326 6.82e-34 127
MS.gene071237.t1 AT5G03810 31.773 299 186 9 1 293 3 289 9.02e-34 126
MS.gene071237.t1 AT5G03820 33.835 266 158 8 1 259 34 288 1.41e-33 126
MS.gene071237.t1 AT1G06990 32.472 271 167 7 30 293 36 297 1.55e-33 126
MS.gene071237.t1 AT2G04570 31.379 290 181 8 11 293 8 286 2.34e-33 125
MS.gene071237.t1 AT1G75880 33.704 270 163 7 30 293 51 310 6.24e-33 124
MS.gene071237.t1 AT1G75900 32.463 268 168 6 30 293 42 300 6.47e-33 124
MS.gene071237.t1 AT1G75930 31.985 272 165 8 31 293 29 289 7.22e-33 124
MS.gene071237.t1 AT2G19060 32.500 280 155 11 24 293 23 278 8.23e-33 124
MS.gene071237.t1 AT1G71120 33.891 239 144 7 26 261 26 253 1.34e-32 123
MS.gene071237.t1 AT1G53920 33.459 266 155 8 31 289 48 298 2.01e-32 123
MS.gene071237.t1 AT1G20130 33.569 283 163 10 25 293 198 469 2.19e-32 125
MS.gene071237.t1 AT5G63170 32.740 281 167 10 19 291 16 282 2.93e-32 122
MS.gene071237.t1 AT1G75880 32.963 270 166 6 30 293 51 311 3.17e-32 122
MS.gene071237.t1 AT1G20130 33.569 283 163 10 25 293 178 449 3.31e-32 124
MS.gene071237.t1 AT1G75910 32.482 274 164 10 30 293 27 289 4.08e-32 122
MS.gene071237.t1 AT2G19050 33.333 264 151 10 26 282 26 271 4.24e-32 120
MS.gene071237.t1 AT5G45950 31.418 261 167 7 31 289 40 290 2.93e-31 120
MS.gene071237.t1 AT2G19050 33.333 264 151 10 26 282 26 271 3.14e-31 119
MS.gene071237.t1 AT1G58430 31.502 273 168 8 30 293 34 296 4.76e-31 119
MS.gene071237.t1 AT2G19010 30.935 278 169 9 11 282 10 270 5.74e-31 119
MS.gene071237.t1 AT1G75920 31.338 284 146 7 18 293 16 258 8.87e-31 117
MS.gene071237.t1 AT2G19010 30.935 278 169 9 11 282 40 300 1.02e-30 119
MS.gene071237.t1 AT3G43550 32.714 269 164 7 30 293 29 285 2.56e-30 115
MS.gene071237.t1 AT4G26790 32.677 254 149 9 26 271 24 263 4.94e-30 116
MS.gene071237.t1 AT4G26790 32.677 254 149 9 26 271 24 263 4.94e-30 116
MS.gene071237.t1 AT3G43570 36.715 207 120 5 30 235 29 225 5.37e-30 115
MS.gene071237.t1 AT1G58520 32.714 269 164 7 30 293 29 285 1.16e-29 115
MS.gene071237.t1 AT1G58525 32.714 269 164 7 30 293 29 285 1.16e-29 115
MS.gene071237.t1 AT5G40990 32.753 287 162 11 12 285 11 279 2.20e-29 115
MS.gene071237.t1 AT1G59406 32.714 269 164 7 30 293 29 285 3.27e-29 114
MS.gene071237.t1 AT1G59030 32.714 269 164 7 30 293 29 285 3.27e-29 114
MS.gene071237.t1 AT1G58725 32.714 269 164 7 30 293 29 285 3.27e-29 114
MS.gene071237.t1 AT2G24560 30.769 273 170 8 30 293 33 295 3.79e-29 113
MS.gene071237.t1 AT2G24560 30.769 273 170 8 30 293 33 295 1.11e-28 113
MS.gene071237.t1 AT1G54030 28.409 264 163 6 32 293 53 292 1.39e-28 112
MS.gene071237.t1 AT1G75920 34.146 246 137 8 60 293 29 261 6.10e-28 110
MS.gene071237.t1 AT1G54030 28.409 264 163 6 32 293 53 292 8.75e-28 111
MS.gene071237.t1 AT1G73610 34.694 245 129 9 16 243 13 243 4.50e-27 108
MS.gene071237.t1 AT1G53990 28.713 303 182 11 7 293 1 285 5.99e-27 108
MS.gene071237.t1 AT2G31540 30.769 273 170 8 30 293 34 296 1.04e-26 107
MS.gene071237.t1 AT2G30310 28.938 273 175 8 30 293 33 295 1.49e-25 104
MS.gene071237.t1 AT3G14225 28.519 270 174 8 31 293 37 294 5.08e-25 103
MS.gene071237.t1 AT3G14225 28.309 272 176 8 31 293 37 298 6.38e-25 103
MS.gene071237.t1 AT1G53940 33.206 262 149 12 31 285 39 281 3.86e-24 99.8
MS.gene071237.t1 AT1G54020 27.181 298 188 8 1 293 1 274 1.34e-23 99.4
MS.gene071237.t1 AT1G54000 29.960 247 143 7 24 263 27 250 1.39e-23 99.8
MS.gene071237.t1 AT1G53940 33.206 262 149 12 31 285 39 281 1.83e-23 99.0
MS.gene071237.t1 AT2G30220 28.676 272 177 7 30 293 32 294 2.80e-23 98.2
MS.gene071237.t1 AT1G54010 28.731 268 163 7 2 263 5 250 7.63e-23 97.4
MS.gene071237.t1 AT5G14450 28.169 284 160 12 30 289 40 303 1.55e-20 90.9
MS.gene071237.t1 AT1G56670 27.103 321 176 13 4 293 3 296 1.69e-20 89.7
MS.gene071237.t1 AT3G27950 28.094 299 170 11 17 290 11 289 6.14e-20 89.0
MS.gene071237.t1 AT1G56670 27.103 321 176 13 4 293 3 296 6.40e-20 89.0
MS.gene071237.t1 AT1G23500 28.283 297 185 9 4 289 8 287 1.38e-19 87.8
MS.gene071237.t1 AT1G71691 27.315 216 144 5 82 293 3 209 9.75e-19 84.3
MS.gene071237.t1 AT2G27360 29.825 285 160 12 7 268 8 275 2.63e-18 84.7
MS.gene071237.t1 AT5G15720 32.461 191 106 7 83 260 48 228 8.99e-18 82.4
MS.gene071237.t1 AT1G54790 26.974 304 184 11 7 289 4 290 1.36e-17 82.4
MS.gene071237.t1 AT3G14210 27.500 240 144 7 31 264 36 251 3.74e-17 81.3
MS.gene071237.t1 AT3G14220 27.237 257 154 11 13 261 14 245 3.25e-16 78.2
MS.gene071237.t1 AT1G09390 26.241 282 174 10 26 293 32 293 4.36e-15 75.1
MS.gene071237.t1 AT4G16220 43.269 104 49 4 24 126 23 117 4.55e-15 73.6
MS.gene071237.t1 AT1G28660 28.520 277 164 9 7 262 8 271 2.83e-14 72.8
MS.gene071237.t1 AT3G26430 26.045 311 172 14 1 281 1 283 3.65e-14 72.4
MS.gene071237.t1 AT3G05180 26.690 281 172 10 30 293 35 298 1.42e-13 70.9
MS.gene071237.t1 AT5G03590 32.278 158 89 7 25 182 29 168 9.24e-13 66.2
MS.gene071237.t1 AT3G48460 25.795 283 170 11 32 293 39 302 1.70e-12 67.4
MS.gene071237.t1 AT1G54020 26.923 182 118 5 114 293 20 188 2.40e-12 66.2
MS.gene071237.t1 AT1G54020 26.923 182 118 5 114 293 20 188 2.40e-12 66.2
MS.gene071237.t1 AT1G54020 26.923 182 118 5 114 293 20 188 2.40e-12 66.2
MS.gene071237.t1 AT1G54790 25.632 277 172 10 30 289 30 289 3.99e-12 66.6
MS.gene071237.t1 AT1G54790 25.632 277 172 10 30 289 30 289 4.07e-12 66.2
MS.gene071237.t1 AT1G28600 30.622 209 122 8 31 230 31 225 6.04e-12 65.9
MS.gene071237.t1 AT1G28590 28.014 282 161 13 4 261 9 272 1.23e-11 65.1
MS.gene071237.t1 AT1G31550 28.870 239 140 11 5 230 9 230 1.50e-11 64.7
MS.gene071237.t1 AT1G31550 28.870 239 140 11 5 230 9 230 1.57e-11 64.7
MS.gene071237.t1 AT2G36325 28.767 219 120 11 22 232 39 229 1.69e-11 64.3
MS.gene071237.t1 AT5G03600 26.441 295 171 16 12 289 24 289 6.32e-11 62.8
MS.gene071237.t1 AT5G03600 25.547 274 172 13 23 289 6 254 9.34e-11 62.0

Find 53 sgRNAs with CRISPR-Local

Find 166 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCCAGCTATTTATGTATT+TGG 0.105963 3.1:-38933296 MS.gene071237:CDS
TCCAATCACAACAGCAAATA+TGG 0.234293 3.1:+38931550 None:intergenic
TTGTCAATTAAATATAATAA+AGG 0.246975 3.1:-38930612 MS.gene071237:CDS
ATATTTAATTGACAATAAAT+TGG 0.255835 3.1:+38930620 None:intergenic
TTGTTCTTGAGCCTGCTTAT+TGG 0.276527 3.1:+38930663 None:intergenic
TGTTCTTGAGCCTGCTTATT+GGG 0.281967 3.1:+38930664 None:intergenic
ATTGGAAGCAATGATATATT+TGG 0.284679 3.1:-38931533 MS.gene071237:CDS
CTCCCAGTTGGTTTCTTAGT+TGG 0.330907 3.1:+38933188 None:intergenic
AAGGCAATTCTTCCTTACTA+TGG 0.347610 3.1:-38933221 MS.gene071237:CDS
CATGGTGTTAACTTTGCATC+TGG 0.361603 3.1:-38932214 MS.gene071237:CDS
TGTCAATTAAATATAATAAA+GGG 0.365897 3.1:-38930611 MS.gene071237:CDS
ATTGTTGGTGTTGGTCCAAT+TGG 0.381303 3.1:-38930693 MS.gene071237:CDS
TCCATATTTGCTGTTGTGAT+TGG 0.392832 3.1:-38931551 MS.gene071237:CDS
CTTGACTCTTTCTCTTGTAA+AGG 0.417918 3.1:-38933240 MS.gene071237:CDS
AACTTTGCATCTGGAGGTGC+TGG 0.420986 3.1:-38932205 MS.gene071237:CDS
AATTCTGAATGATGTCTTGT+AGG 0.421416 3.1:+38930511 None:intergenic
CTTATTGGGCAGCATCCAAT+TGG 0.428003 3.1:+38930678 None:intergenic
GAATTTGATCTTAGATACTA+AGG 0.434238 3.1:+38932261 None:intergenic
TTTCCAACTAAGAAACCAAC+TGG 0.449783 3.1:-38933191 MS.gene071237:CDS
ATTCAGAATTCAATTTCTTA+CGG 0.453903 3.1:-38930498 None:intergenic
ATATTTCCATGGTTATGATA+AGG 0.454312 3.1:-38933376 MS.gene071237:CDS
GCAAGGAAATTTGAGATTGT+TGG 0.456704 3.1:-38930708 MS.gene071237:CDS
CAATTTCCATTCTTTCAACA+TGG 0.458884 3.1:+38930581 None:intergenic
TTCTTCATCTTTATAAGCTT+AGG 0.464361 3.1:-38933338 MS.gene071237:CDS
TTCAATCCATGTTGAAAGAA+TGG 0.464395 3.1:-38930587 MS.gene071237:CDS
TTCCAAAATGGATATTTCCA+TGG 0.492003 3.1:-38933387 None:intergenic
GGAAAGTCAATGCCATAGTA+AGG 0.495108 3.1:+38933209 None:intergenic
TCTCCAAATACATAAATAGC+TGG 0.502551 3.1:+38933293 None:intergenic
TTGGATGCTGCCCAATAAGC+AGG 0.504039 3.1:-38930674 MS.gene071237:CDS
ATTTGGTTACTATAACTCAA+TGG 0.512877 3.1:-38931516 MS.gene071237:CDS
AAACACCCCACAACAATATG+TGG 0.527276 3.1:-38931480 MS.gene071237:CDS
CCATTGCTAAACCTCCCAGT+TGG 0.530428 3.1:+38933176 None:intergenic
GGTAAGGTGGTGACGTGGCA+AGG 0.533117 3.1:+38932287 None:intergenic
TGGAATCCACATATTGTTGT+GGG 0.533182 3.1:+38931474 None:intergenic
GGAGACTCACTTGTTGATGT+TGG 0.541601 3.1:-38933275 MS.gene071237:CDS
AATATCTTTGACAAAGCAAG+TGG 0.550682 3.1:-38931648 MS.gene071237:CDS
ATGGAATCCACATATTGTTG+TGG 0.560825 3.1:+38931473 None:intergenic
AAATTTGAGATTGTTGGTGT+TGG 0.567264 3.1:-38930702 MS.gene071237:CDS
ATTCTGAATGATGTCTTGTA+GGG 0.572631 3.1:+38930512 None:intergenic
TTAGATACTAAGGAGAGGTA+AGG 0.573518 3.1:+38932271 None:intergenic
GAAATTCCTTATCATAACCA+TGG 0.576411 3.1:+38933370 None:intergenic
AGAATGGAAATTGCAGAACA+AGG 0.576957 3.1:-38930571 MS.gene071237:CDS
GGTGTTAACTTTGCATCTGG+AGG 0.589960 3.1:-38932211 MS.gene071237:CDS
GACTATATAACAATGGTGCA+AGG 0.608673 3.1:-38930725 MS.gene071237:CDS
AAGAATATATCATTCTTGCA+TGG 0.617881 3.1:-38932232 MS.gene071237:CDS
TGGCAGAGACTATATAACAA+TGG 0.619822 3.1:-38930732 MS.gene071237:intron
GATACTAAGGAGAGGTAAGG+TGG 0.626001 3.1:+38932274 None:intergenic
GGAGAGGTAAGGTGGTGACG+TGG 0.671631 3.1:+38932282 None:intergenic
CAACTAAGAAACCAACTGGG+AGG 0.671928 3.1:-38933187 MS.gene071237:CDS
TGATCTTAGATACTAAGGAG+AGG 0.675757 3.1:+38932266 None:intergenic
CCAACTGGGAGGTTTAGCAA+TGG 0.692546 3.1:-38933176 MS.gene071237:CDS
TTCCAACTAAGAAACCAACT+GGG 0.701712 3.1:-38933190 MS.gene071237:CDS
GGAATCCACATATTGTTGTG+GGG 0.712103 3.1:+38931475 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATATATATTTTTTAT+TGG - chr3.1:38931364-38931383 MS.gene071237:intron 0.0%
!! ATATTTAATTGACAATAAAT+TGG + chr3.1:38933262-38933281 None:intergenic 10.0%
!! TGTCAATTAAATATAATAAA+GGG - chr3.1:38933268-38933287 MS.gene071237:CDS 10.0%
!! TTGTCAATTAAATATAATAA+AGG - chr3.1:38933267-38933286 MS.gene071237:CDS 10.0%
!!! AATTATTATTTTGAGAAAAA+TGG + chr3.1:38933109-38933128 None:intergenic 10.0%
!!! ATTATTATTTTGAGAAAAAT+GGG + chr3.1:38933108-38933127 None:intergenic 10.0%
!!! ATTTTATAATACGTATAAAA+TGG - chr3.1:38932870-38932889 MS.gene071237:intron 10.0%
!!! TTTCTCAAAATAATAATTTT+GGG - chr3.1:38933111-38933130 MS.gene071237:intron 10.0%
!!! TTTTCTCAAAATAATAATTT+TGG - chr3.1:38933110-38933129 MS.gene071237:intron 10.0%
!! ATAATTTCAAAAATGAGTAT+TGG - chr3.1:38933063-38933082 MS.gene071237:intron 15.0%
!! ATTTCACTATATAGAATTAT+AGG + chr3.1:38932936-38932955 None:intergenic 15.0%
!! GTAATACTTAATGATATAAT+AGG + chr3.1:38932596-38932615 None:intergenic 15.0%
!!! CAAAATTGTTTCTTATAATA+AGG - chr3.1:38932737-38932756 MS.gene071237:intron 15.0%
!!! TTTTATCTTTCTTTTTACAA+AGG + chr3.1:38931290-38931309 None:intergenic 15.0%
!! AAATATATCAAATGCATACA+AGG - chr3.1:38932952-38932971 MS.gene071237:intron 20.0%
!! AATATATCAAATGCATACAA+GGG - chr3.1:38932953-38932972 MS.gene071237:intron 20.0%
!! ACCGAAAATGTATATAATTT+AGG + chr3.1:38932007-38932026 None:intergenic 20.0%
!! CCGAAAATGTATATAATTTA+GGG + chr3.1:38932006-38932025 None:intergenic 20.0%
!! GTTTCATTAATATTGTAAAG+TGG + chr3.1:38932558-38932577 None:intergenic 20.0%
!! TTCAAAACGACATATAATTT+GGG + chr3.1:38932508-38932527 None:intergenic 20.0%
!!! AAAAAAACTTAAAAGCATGT+TGG - chr3.1:38931307-38931326 MS.gene071237:intron 20.0%
!!! AAGACAAAAGCATTAAATTT+TGG + chr3.1:38931428-38931447 None:intergenic 20.0%
!!! ACTTTTATAAATTTGATGCT+TGG + chr3.1:38931223-38931242 None:intergenic 20.0%
!!! AGAAACAATTTTGACTTTTT+AGG + chr3.1:38932730-38932749 None:intergenic 20.0%
!!! ATATACATTTTCGGTAAAAT+AGG - chr3.1:38932012-38932031 MS.gene071237:intron 20.0%
!!! CCCTAAATTATATACATTTT+CGG - chr3.1:38932003-38932022 MS.gene071237:intron 20.0%
!!! CTTTTATAAATTTGATGCTT+GGG + chr3.1:38931222-38931241 None:intergenic 20.0%
!!! GCATATTGATTATTGATATT+TGG - chr3.1:38931469-38931488 MS.gene071237:CDS 20.0%
!!! GTCAATTGTTTCTTATAATA+AGG + chr3.1:38932629-38932648 None:intergenic 20.0%
!!! GTGTTTGTTGTTATTATTAT+TGG - chr3.1:38930789-38930808 MS.gene071237:intron 20.0%
!!! TCAAAATAATAATTTTGGGT+TGG - chr3.1:38933115-38933134 MS.gene071237:intron 20.0%
!!! TTTTGCATGCATTTTAATAT+TGG - chr3.1:38932991-38933010 MS.gene071237:intron 20.0%
! AAAACATTTATGCATGCATA+TGG - chr3.1:38931253-38931272 MS.gene071237:intron 25.0%
! AAGAATATATCATTCTTGCA+TGG - chr3.1:38931647-38931666 MS.gene071237:CDS 25.0%
! ATATTTCCATGGTTATGATA+AGG - chr3.1:38930503-38930522 MS.gene071237:CDS 25.0%
! ATTGGAAGCAATGATATATT+TGG - chr3.1:38932346-38932365 MS.gene071237:intron 25.0%
! ATTTGGTTACTATAACTCAA+TGG - chr3.1:38932363-38932382 MS.gene071237:intron 25.0%
! CACATGTTAAAAATTTAGCA+TGG - chr3.1:38931877-38931896 MS.gene071237:intron 25.0%
! CTTCAAAACGACATATAATT+TGG + chr3.1:38932509-38932528 None:intergenic 25.0%
! GAATTTGATCTTAGATACTA+AGG + chr3.1:38931621-38931640 None:intergenic 25.0%
! TTCTTCATCTTTATAAGCTT+AGG - chr3.1:38930541-38930560 MS.gene071237:CDS 25.0%
!! ATTATCTCTGGTGTTAATTT+AGG - chr3.1:38930976-38930995 MS.gene071237:intron 25.0%
!! TAATGAGTTTTTCTATCATC+TGG - chr3.1:38931847-38931866 MS.gene071237:intron 25.0%
!! TCTTTACATTTTGAGCTTTT+TGG + chr3.1:38932135-38932154 None:intergenic 25.0%
!! TGTCTTGTTGATATTATGTT+GGG - chr3.1:38931442-38931461 MS.gene071237:intron 25.0%
!! TTGTCTTGTTGATATTATGT+TGG - chr3.1:38931441-38931460 MS.gene071237:intron 25.0%
!! TTTTCCTATGTTTTCATCTT+TGG + chr3.1:38932105-38932124 None:intergenic 25.0%
!!! ACAAATTGACACTCTTTTTT+TGG - chr3.1:38930818-38930837 MS.gene071237:intron 25.0%
!!! ATTTTTTATTGGAAGACAAG+AGG - chr3.1:38931375-38931394 MS.gene071237:intron 25.0%
!!! CAAATTATATGTCGTTTTGA+AGG - chr3.1:38932507-38932526 MS.gene071237:intron 25.0%
!!! CATGCATTTTAATATTGGAT+AGG - chr3.1:38932996-38933015 MS.gene071237:intron 25.0%
AAAACGACATATAATTTGGG+AGG + chr3.1:38932505-38932524 None:intergenic 30.0%
AAACGACATATAATTTGGGA+GGG + chr3.1:38932504-38932523 None:intergenic 30.0%
AACATTACACAACCACTTAT+TGG - chr3.1:38930841-38930860 MS.gene071237:intron 30.0%
AATATCTTTGACAAAGCAAG+TGG - chr3.1:38932231-38932250 MS.gene071237:CDS 30.0%
AATGATAATTGATCCGATGA+TGG - chr3.1:38931170-38931189 MS.gene071237:intron 30.0%
AATGCCAAAGATGAAAACAT+AGG - chr3.1:38932098-38932117 MS.gene071237:intron 30.0%
AATTCTGAATGATGTCTTGT+AGG + chr3.1:38933371-38933390 None:intergenic 30.0%
AATTGAATGAAAAGAGAGTC+TGG + chr3.1:38932764-38932783 None:intergenic 30.0%
ACAAAATTGTCCTTGACAAA+TGG + chr3.1:38932808-38932827 None:intergenic 30.0%
ACTCCAGCTATTTATGTATT+TGG - chr3.1:38930583-38930602 MS.gene071237:CDS 30.0%
ATTCTGAATGATGTCTTGTA+GGG + chr3.1:38933370-38933389 None:intergenic 30.0%
CAAACACGTAAATACAGAAT+TGG + chr3.1:38931761-38931780 None:intergenic 30.0%
CAATTTCCATTCTTTCAACA+TGG + chr3.1:38933301-38933320 None:intergenic 30.0%
CTCACTAAAAATACAACTAC+AGG - chr3.1:38932435-38932454 MS.gene071237:intron 30.0%
GAAATTCCTTATCATAACCA+TGG + chr3.1:38930512-38930531 None:intergenic 30.0%
GCATGAAAAAAGTGATGATT+TGG - chr3.1:38931816-38931835 MS.gene071237:intron 30.0%
TATATAGTCTCTGCCAAAAA+AGG + chr3.1:38933143-38933162 None:intergenic 30.0%
TCAACCTTATTGACCAAAAA+AGG - chr3.1:38932054-38932073 MS.gene071237:intron 30.0%
TCATTAAGTATTACTCCATC+TGG - chr3.1:38932602-38932621 MS.gene071237:intron 30.0%
TCTCCAAATACATAAATAGC+TGG + chr3.1:38930589-38930608 None:intergenic 30.0%
TGGGTGAATATGTACTATAA+AGG - chr3.1:38931401-38931420 MS.gene071237:intron 30.0%
TTCAATCCATGTTGAAAGAA+TGG - chr3.1:38933292-38933311 MS.gene071237:CDS 30.0%
TTCTTATAATAAGGACCAGA+TGG + chr3.1:38932765-38932746 None:intergenic 30.0%
! AAATTTGAGATTGTTGGTGT+TGG - chr3.1:38933177-38933196 MS.gene071237:CDS 30.0%
! AATGTGACTTTTTGAACCAA+TGG + chr3.1:38931134-38931153 None:intergenic 30.0%
! ACTAGCTTATGCATCAATAT+TGG - chr3.1:38931195-38931214 MS.gene071237:intron 30.0%
! AGAACTACACTCACAATTTT+TGG + chr3.1:38931719-38931738 None:intergenic 30.0%
! ATGTGACTTTTTGAACCAAT+GGG + chr3.1:38931133-38931152 None:intergenic 30.0%
! GTCGTATAATTTGGGATTAA+AGG - chr3.1:38932900-38932919 MS.gene071237:intron 30.0%
! TTTTCTCATACCATTTGTCA+AGG - chr3.1:38932795-38932814 MS.gene071237:intron 30.0%
!! AAAAATGCTGCTGATTTGAT+TGG - chr3.1:38930727-38930746 MS.gene071237:CDS 30.0%
!!! AAATTTTGTTTGACTTGCCA+TGG - chr3.1:38931541-38931560 MS.gene071237:CDS 30.0%
!!! CTGTAGTTGTATTTTTAGTG+AGG + chr3.1:38932437-38932456 None:intergenic 30.0%
!!! TATCTAATGCTCTCCTTTTT+TGG + chr3.1:38932070-38932089 None:intergenic 30.0%
!!! TATTTTTAGTGAGGAAGTCA+TGG + chr3.1:38932428-38932447 None:intergenic 30.0%
AAGGCAATTCTTCCTTACTA+TGG - chr3.1:38930658-38930677 MS.gene071237:CDS 35.0%
ACAACTACAGGTAAACACAA+TGG - chr3.1:38932447-38932466 MS.gene071237:intron 35.0%
AGAATGGAAATTGCAGAACA+AGG - chr3.1:38933308-38933327 MS.gene071237:CDS 35.0%
ATGGAATCCACATATTGTTG+TGG + chr3.1:38932409-38932428 None:intergenic 35.0%
ATTCTAACTGAGATTCCCAT+TGG - chr3.1:38932185-38932204 MS.gene071237:CDS 35.0%
ATTGGAAGACAAGAGGAAAT+GGG - chr3.1:38931382-38931401 MS.gene071237:intron 35.0%
ATTGGATAGGTACCTATACA+TGG - chr3.1:38933009-38933028 MS.gene071237:intron 35.0%
CTGCAATAAATTCCACCAAT+GGG + chr3.1:38932203-38932222 None:intergenic 35.0%
CTTGACTCTTTCTCTTGTAA+AGG - chr3.1:38930639-38930658 MS.gene071237:CDS 35.0%
GACTATATAACAATGGTGCA+AGG - chr3.1:38933154-38933173 MS.gene071237:CDS 35.0%
GATTGCAAATGACCAATAAG+TGG + chr3.1:38930856-38930875 None:intergenic 35.0%
GCCAAAACGTCGTATAATTT+GGG - chr3.1:38932892-38932911 MS.gene071237:intron 35.0%
TATTGGAAGACAAGAGGAAA+TGG - chr3.1:38931381-38931400 MS.gene071237:intron 35.0%
TCCAATCACAACAGCAAATA+TGG + chr3.1:38932332-38932351 None:intergenic 35.0%
TCTGCAATAAATTCCACCAA+TGG + chr3.1:38932204-38932223 None:intergenic 35.0%
TGATCTTAGATACTAAGGAG+AGG + chr3.1:38931616-38931635 None:intergenic 35.0%
TGGAATCCACATATTGTTGT+GGG + chr3.1:38932408-38932427 None:intergenic 35.0%
TGGCAGAGACTATATAACAA+TGG - chr3.1:38933147-38933166 MS.gene071237:intron 35.0%
TTAGATACTAAGGAGAGGTA+AGG + chr3.1:38931611-38931630 None:intergenic 35.0%
TTCCAACTAAGAAACCAACT+GGG - chr3.1:38930689-38930708 MS.gene071237:CDS 35.0%
TTTACCATTGAGCCATGTAT+AGG + chr3.1:38933024-38933043 None:intergenic 35.0%
TTTCCAACTAAGAAACCAAC+TGG - chr3.1:38930688-38930707 MS.gene071237:CDS 35.0%
! AAAAGCATGTTGGCTATCAA+AGG - chr3.1:38931317-38931336 MS.gene071237:intron 35.0%
! AAAGCATGTTGGCTATCAAA+GGG - chr3.1:38931318-38931337 MS.gene071237:intron 35.0%
! ATAAGTGTCTTTTCACCCAT+TGG - chr3.1:38931115-38931134 MS.gene071237:intron 35.0%
! ATCTCTGGTGTTAATTTAGG+TGG - chr3.1:38930979-38930998 MS.gene071237:intron 35.0%
! CAGCAAATATGGATTTTGAG+AGG + chr3.1:38932321-38932340 None:intergenic 35.0%
! CATAAGCTAGTTTCCATCAT+CGG + chr3.1:38931186-38931205 None:intergenic 35.0%
! GCAAGGAAATTTGAGATTGT+TGG - chr3.1:38933171-38933190 MS.gene071237:CDS 35.0%
! TCCCAAATTATACGACGTTT+TGG + chr3.1:38932896-38932915 None:intergenic 35.0%
! TCTCTGGTGTTAATTTAGGT+GGG - chr3.1:38930980-38930999 MS.gene071237:intron 35.0%
!! TCCATATTTGCTGTTGTGAT+TGG - chr3.1:38932328-38932347 MS.gene071237:intron 35.0%
!! TTGACTTGCCATGGTATATT+TGG - chr3.1:38931550-38931569 MS.gene071237:CDS 35.0%
!!! CTCTCCTTTTTTGGTCAATA+AGG + chr3.1:38932061-38932080 None:intergenic 35.0%
!!! TTTTGGGTTGGTACCTTTTT+TGG - chr3.1:38933127-38933146 MS.gene071237:intron 35.0%
AAACACCCCACAACAATATG+TGG - chr3.1:38932399-38932418 MS.gene071237:intron 40.0%
AGCTGCAACCAAATATACCA+TGG + chr3.1:38931561-38931580 None:intergenic 40.0%
CCTAACATGCACAAGCAAAA+TGG - chr3.1:38931079-38931098 MS.gene071237:intron 40.0%
GACATATAATTTGGGAGGGA+GGG + chr3.1:38932500-38932519 None:intergenic 40.0%
GGAAAGTCAATGCCATAGTA+AGG + chr3.1:38930673-38930692 None:intergenic 40.0%
GGAATCCACATATTGTTGTG+GGG + chr3.1:38932407-38932426 None:intergenic 40.0%
GGCCAAAACGTCGTATAATT+TGG - chr3.1:38932891-38932910 MS.gene071237:intron 40.0%
GGTGAAAAGACACTTATGTG+CGG + chr3.1:38931112-38931131 None:intergenic 40.0%
TGTTCTTGAGCCTGCTTATT+GGG + chr3.1:38933218-38933237 None:intergenic 40.0%
TTGGTTGCAGCTGAAAAAGT+AGG - chr3.1:38931569-38931588 MS.gene071237:CDS 40.0%
TTGTTCTTGAGCCTGCTTAT+TGG + chr3.1:38933219-38933238 None:intergenic 40.0%
! ATTAGCTTCCTAACCCACAT+GGG - chr3.1:38930896-38930915 MS.gene071237:intron 40.0%
! CATGGTGTTAACTTTGCATC+TGG - chr3.1:38931665-38931684 MS.gene071237:intron 40.0%
! CCATTTTGCTTGTGCATGTT+AGG + chr3.1:38931082-38931101 None:intergenic 40.0%
! TATTAGCTTCCTAACCCACA+TGG - chr3.1:38930895-38930914 MS.gene071237:intron 40.0%
!! ATTGTTGGTGTTGGTCCAAT+TGG - chr3.1:38933186-38933205 MS.gene071237:CDS 40.0%
ATAATCGAACCTGAGACCTG+AGG + chr3.1:38930961-38930980 None:intergenic 45.0%
CAACTAAGAAACCAACTGGG+AGG - chr3.1:38930692-38930711 MS.gene071237:CDS 45.0%
CGACATATAATTTGGGAGGG+AGG + chr3.1:38932501-38932520 None:intergenic 45.0%
CTAACTGAGATTCCCATTGG+TGG - chr3.1:38932188-38932207 MS.gene071237:CDS 45.0%
CTTATTGGGCAGCATCCAAT+TGG + chr3.1:38933204-38933223 None:intergenic 45.0%
GATACTAAGGAGAGGTAAGG+TGG + chr3.1:38931608-38931627 None:intergenic 45.0%
GGTACCTATACATGGCTCAA+TGG - chr3.1:38933017-38933036 MS.gene071237:intron 45.0%
GGTGTTAACTTTGCATCTGG+AGG - chr3.1:38931668-38931687 MS.gene071237:intron 45.0%
GTCTCAGGTTCGATTATCTC+TGG - chr3.1:38930964-38930983 MS.gene071237:intron 45.0%
! CATGTTGGCTATCAAAGGGT+AGG - chr3.1:38931322-38931341 MS.gene071237:intron 45.0%
! CTCCCAGTTGGTTTCTTAGT+TGG + chr3.1:38930694-38930713 None:intergenic 45.0%
! GGAGACTCACTTGTTGATGT+TGG - chr3.1:38930604-38930623 MS.gene071237:CDS 45.0%
CCAACTGGGAGGTTTAGCAA+TGG - chr3.1:38930703-38930722 MS.gene071237:CDS 50.0%
CCATTGCTAAACCTCCCAGT+TGG + chr3.1:38930706-38930725 None:intergenic 50.0%
TTGGATGCTGCCCAATAAGC+AGG - chr3.1:38933205-38933224 MS.gene071237:CDS 50.0%
! AACTTTGCATCTGGAGGTGC+TGG - chr3.1:38931674-38931693 MS.gene071237:intron 50.0%
!! TGGCCTAGTGGCATTGACTT+GGG - chr3.1:38930920-38930939 MS.gene071237:intron 50.0%
!! TTGGCCTAGTGGCATTGACT+TGG - chr3.1:38930919-38930938 MS.gene071237:intron 50.0%
GACCTGAGGAACACACTCTC+AGG + chr3.1:38930947-38930966 None:intergenic 55.0%
GAGTGTGTTCCTCAGGTCTC+AGG - chr3.1:38930949-38930968 MS.gene071237:intron 55.0%
GCTTCCTAACCCACATGGGT+TGG - chr3.1:38930900-38930919 MS.gene071237:intron 55.0%
GGTCCCAAGTCAATGCCACT+AGG + chr3.1:38930926-38930945 None:intergenic 55.0%
TAGGCCAACCCATGTGGGTT+AGG + chr3.1:38930907-38930926 None:intergenic 55.0%
! GACCTGAGAGTGTGTTCCTC+AGG - chr3.1:38930942-38930961 MS.gene071237:intron 55.0%
GCCACTAGGCCAACCCATGT+GGG + chr3.1:38930912-38930931 None:intergenic 60.0%
TGCCACTAGGCCAACCCATG+TGG + chr3.1:38930913-38930932 None:intergenic 60.0%
! GGAGAGGTAAGGTGGTGACG+TGG + chr3.1:38931600-38931619 None:intergenic 60.0%
! GGTAAGGTGGTGACGTGGCA+AGG + chr3.1:38931595-38931614 None:intergenic 60.0%
!! ACCCACATGGGTTGGCCTAG+TGG - chr3.1:38930908-38930927 MS.gene071237:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 38930499 38933402 38930499 ID=MS.gene071237
chr3.1 mRNA 38930499 38933402 38930499 ID=MS.gene071237.t1;Parent=MS.gene071237
chr3.1 exon 38933153 38933402 38933153 ID=MS.gene071237.t1.exon1;Parent=MS.gene071237.t1
chr3.1 CDS 38933153 38933402 38933153 ID=cds.MS.gene071237.t1;Parent=MS.gene071237.t1
chr3.1 exon 38932177 38932322 38932177 ID=MS.gene071237.t1.exon2;Parent=MS.gene071237.t1
chr3.1 CDS 38932177 38932322 38932177 ID=cds.MS.gene071237.t1;Parent=MS.gene071237.t1
chr3.1 exon 38931445 38931678 38931445 ID=MS.gene071237.t1.exon3;Parent=MS.gene071237.t1
chr3.1 CDS 38931445 38931678 38931445 ID=cds.MS.gene071237.t1;Parent=MS.gene071237.t1
chr3.1 exon 38930499 38930748 38930499 ID=MS.gene071237.t1.exon4;Parent=MS.gene071237.t1
chr3.1 CDS 38930499 38930748 38930499 ID=cds.MS.gene071237.t1;Parent=MS.gene071237.t1
Gene Sequence

>MS.gene071237

ATGGATATTTCCATGGTTATGATAAGGAATTTCTTTCTATCTTTCTTCATCTTTATAAGCTTAGGATTCTTAGAAGCTCAAAAGACTCCAGCTATTTATGTATTTGGAGACTCACTTGTTGATGTTGGCAACAACAATCACTTGACTCTTTCTCTTGTAAAGGCAATTCTTCCTTACTATGGCATTGACTTTCCAACTAAGAAACCAACTGGGAGGTTTAGCAATGGCAAAAATGCTGCTGATTTGATTGGTAAGTTATTCAAAGTTCACTCTCTTTGATTTTCAAACAAGTGTTTGTTGTTATTATTATTGGAAGATGACAAATTGACACTCTTTTTTTGGAACATTACACAACCACTTATTGGTCATTTGCAATCTTCTTTTGCTTCAATATTATATTAGCTTCCTAACCCACATGGGTTGGCCTAGTGGCATTGACTTGGGACCTGAGAGTGTGTTCCTCAGGTCTCAGGTTCGATTATCTCTGGTGTTAATTTAGGTGGGTCAATTTAGCTTATTTAAAAAAATATTTTTAGCTTCTTTGTTTGTCTATTACAAATTGAACTTTGAGAATGTTTTGCCTAACATGCACAAGCAAAATGGTCTTACACCGCACATAAGTGTCTTTTCACCCATTGGTTCAAAAAGTCACATTATATTTCATTTAATTTAATGATAATTGATCCGATGATGGAAACTAGCTTATGCATCAATATTGGACCCAAGCATCAAATTTATAAAAGTTCATATAGTTAAAACATTTATGCATGCATATGGTTAAAAAGAAACCTTTGTAAAAAGAAAGATAAAAAAAACTTAAAAGCATGTTGGCTATCAAAGGGTAGGAAAGAAAATATTTGCACAATTTTTATATATATTTTTTATTGGAAGACAAGAGGAAATGGGTGAATATGTACTATAAAGGACCAAAATTTAATGCTTTTGTCTTGTTGATATTATGTTGGGACATGCATATTGATTATTGATATTTGGTAATAGTAATATACAAAATATGTTTTGCTAATATTTGCATAAATTCAACAAATTTTGTTTGACTTGCCATGGTATATTTGGTTGCAGCTGAAAAAGTAGGCCTTGCCACGTCACCACCTTACCTCTCCTTAGTATCTAAGATCAAATTCAACAAGAAGAATATATCATTCTTGCATGGTGTTAACTTTGCATCTGGAGGTGCTGGAATATTTAATCGCACAGATCCAAAAATTGTGAGTGTAGTTCTAATTCTTTCTTTTCTTTATCCAATTCTGTATTTACGTGTTTGTACAAAAAAATTGTAGTCAAAAAAGAAATTGTGCAGCATGAAAAAAGTGATGATTTGGATTAAAATTAATGAGTTTTTCTATCATCTGGAAATTTGCACATGTTAAAAATTTAGCATGGTAAATTTGTCTTAGAATTTGTACATTTTATATTAAACAAATAATTTTTTAATAAATAATTTGCGTTTTTCAATAAAAAGTGACTATTTAACATGTTAGACAAACCCTAAATTATATACATTTTCGGTAAAATAGGTCTAGATCTTAACTTATTCTCAACCTTATTGACCAAAAAAGGAGAGCATTAGATAAAATGAAAAATGCCAAAGATGAAAACATAGGAAAAGTAGCAACCAAAAAGCTCAAAATGTAAAGAAAATGATTAAGCAATGAGAAAAAATATATCATTCTAACTGAGATTCCCATTGGTGGAATTTATTGCAGAGACAATCAATATCTTTGACAAAGCAAGTGGACTATTATTCACAAGTGCATGAAAAATTGACACAACAAACAGAAGCATCTACACTTCAGAAACACCTCTCAAAATCCATATTTGCTGTTGTGATTGGAAGCAATGATATATTTGGTTACTATAACTCAATGGATCTTCAAAAGAAAAACACCCCACAACAATATGTGGATTCCATGACTTCCTCACTAAAAATACAACTACAGGTAAACACAATGGTTTGTAAATTGTTATTAAATTACTACTCCCTCCCTCCCAAATTATATGTCGTTTTGAAGGAAAAAAAAGTGTCTCAAATTATATGCCACTTTACAATATTAATGAAACATTAATGTTATTTTTCCTATTATATCATTAAGTATTACTCCATCTGGTCCTTATTATAAGAAACAATTGACTTTTTAAATTCGTTGTGTATGTGATGTATCTAGTCTATATTTATAAATTATAACGAGATACATCAATTATTCAATGAACCTAAAAAGTCAAAATTGTTTCTTATAATAAGGACCAGACTCTCTTTTCATTCAATTCTTTAATTTATTTTTCTCATACCATTTGTCAAGGACAATTTTGTAAAACAACTCATAATATCTCTTTCTCATACAAAATTAGTTACATTTTATAATACGTATAAAATGGCCAAAACGTCGTATAATTTGGGATTAAAGGAGTACTGATTCCTATAATTCTATATAGTGAAATATATCAAATGCATACAAGGGTTAAAATTTATGTTATTTTGCATGCATTTTAATATTGGATAGGTACCTATACATGGCTCAATGGTAAACACATGATCTAGTCTAGTAATAATTTCAAAAATGAGTATTGGTTTCATTTTAATTTTATATCCCATTTTTCTCAAAATAATAATTTTGGGTTGGTACCTTTTTTGGCAGAGACTATATAACAATGGTGCAAGGAAATTTGAGATTGTTGGTGTTGGTCCAATTGGATGCTGCCCAATAAGCAGGCTCAAGAACAAAACAGAGTGTTTTTCACAAACCAATTTATTGTCAATTAAATATAATAAAGGGCTTCAATCCATGTTGAAAGAATGGAAATTGCAGAACAAGGACTTAATAAGTTACTCATATTTTGATAGTTTTGCTGCCCTACAAGACATCATTCAGAATTCAATTTCTTACG
Protein sequence

>MS.gene071237.t1

MDISMVMIRNFFLSFFIFISLGFLEAQKTPAIYVFGDSLVDVGNNNHLTLSLVKAILPYYGIDFPTKKPTGRFSNGKNAADLIAEKVGLATSPPYLSLVSKIKFNKKNISFLHGVNFASGGAGIFNRTDPKIRQSISLTKQVDYYSQVHEKLTQQTEASTLQKHLSKSIFAVVIGSNDIFGYYNSMDLQKKNTPQQYVDSMTSSLKIQLQRLYNNGARKFEIVGVGPIGCCPISRLKNKTECFSQTNLLSIKYNKGLQSMLKEWKLQNKDLISYSYFDSFAALQDIIQNSISY