AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene071319

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071319.t1 MTR_7g005910 99.200 500 4 0 1 500 1 500 0.0 1003
MS.gene071319.t1 MTR_1g116660 78.138 494 102 2 7 494 9 502 0.0 774
MS.gene071319.t1 MTR_3g084110 73.577 492 129 1 9 499 4 495 0.0 760
MS.gene071319.t1 MTR_1g116650 75.198 504 104 3 1 500 47 533 0.0 747
MS.gene071319.t1 MTR_5g077580 46.250 560 194 6 28 492 21 568 4.47e-166 481
MS.gene071319.t1 MTR_2g049020 58.501 347 141 1 28 371 21 367 7.35e-139 412
MS.gene071319.t1 MTR_2g049020 55.385 130 53 1 376 500 450 579 1.59e-38 148
MS.gene071319.t1 MTR_2g048720 57.303 356 144 1 21 368 6 361 4.80e-130 389
MS.gene071319.t1 MTR_2g048720 56.667 120 50 1 363 482 436 553 4.54e-30 124
MS.gene071319.t1 MTR_2g026160 57.602 342 139 1 29 364 23 364 1.94e-125 378
MS.gene071319.t1 MTR_2g026160 52.830 106 50 0 376 481 453 558 1.97e-26 113
MS.gene071319.t1 MTR_2g026140 52.632 342 141 3 29 364 23 349 6.84e-105 325
MS.gene071319.t1 MTR_2g026140 53.465 101 47 0 376 476 438 538 1.06e-21 99.0
MS.gene071319.t1 MTR_2g013310 35.153 458 286 5 30 481 50 502 1.41e-80 260
MS.gene071319.t1 MTR_7g082270 35.065 462 284 6 18 476 51 499 1.41e-79 257
MS.gene071319.t1 MTR_6g018790 36.184 456 278 6 21 476 97 539 5.06e-79 257
MS.gene071319.t1 MTR_4g072030 33.820 479 289 7 18 476 14 484 7.71e-76 248
MS.gene071319.t1 MTR_2g013310 34.873 433 271 5 54 480 1 428 4.23e-74 241
MS.gene071319.t1 MTR_4g069500 30.632 506 315 10 18 499 17 510 1.70e-73 241
MS.gene071319.t1 MTR_3g116240 32.479 468 291 6 30 476 25 488 3.89e-73 240
MS.gene071319.t1 MTR_8g077890 32.653 490 301 9 20 487 8 490 4.37e-73 240
MS.gene071319.t1 MTR_7g446340 32.696 471 296 8 22 482 46 505 1.24e-72 239
MS.gene071319.t1 MTR_6g007340 32.696 471 296 8 22 482 46 505 1.24e-72 239
MS.gene071319.t1 MTR_5g075300 32.842 475 292 8 30 482 16 485 1.24e-68 228
MS.gene071319.t1 MTR_7g082270 36.483 381 229 5 31 411 67 434 6.27e-66 220
MS.gene071319.t1 MTR_4g069500 30.213 470 294 9 54 499 1 460 2.56e-65 219
MS.gene071319.t1 MTR_4g077740 31.947 457 274 6 43 476 55 497 1.60e-63 215
MS.gene071319.t1 MTR_6g088450 30.968 465 299 9 18 469 45 500 5.02e-62 211
MS.gene071319.t1 MTR_3g080240 31.648 455 295 7 31 483 95 535 3.82e-61 209
MS.gene071319.t1 MTR_4g118610 31.524 479 304 10 4 476 23 483 8.32e-61 207
MS.gene071319.t1 MTR_7g113960 33.483 445 271 9 36 476 32 455 5.59e-60 205
MS.gene071319.t1 MTR_3g023480 28.931 477 307 10 37 486 25 496 2.08e-59 204
MS.gene071319.t1 MTR_1g022315 33.333 411 250 9 80 480 93 489 4.14e-59 202
MS.gene071319.t1 MTR_8g103500 30.108 465 306 5 30 481 15 473 7.48e-59 202
MS.gene071319.t1 MTR_5g006070 30.943 488 293 13 31 486 20 495 8.11e-59 202
MS.gene071319.t1 MTR_1g022315 33.500 400 242 9 87 476 1 386 4.30e-58 197
MS.gene071319.t1 MTR_7g094450 32.043 465 287 11 19 476 28 470 8.51e-58 199
MS.gene071319.t1 MTR_8g077310 32.886 447 274 10 39 476 53 482 9.66e-58 199
MS.gene071319.t1 MTR_6g087910 31.236 461 294 10 20 477 44 484 3.13e-57 198
MS.gene071319.t1 MTR_3g093010 28.452 478 311 9 36 487 25 497 6.78e-57 197
MS.gene071319.t1 MTR_5g077590 35.777 341 145 9 188 470 63 387 8.41e-57 194
MS.gene071319.t1 MTR_1g104780 30.879 489 296 13 39 496 28 505 1.14e-56 197
MS.gene071319.t1 MTR_0009s0370 27.198 489 322 10 39 499 27 509 4.74e-56 195
MS.gene071319.t1 MTR_8g077310 34.000 400 239 10 87 476 1 385 1.14e-55 191
MS.gene071319.t1 MTR_1g104750 28.364 483 315 11 30 487 20 496 3.32e-55 192
MS.gene071319.t1 MTR_2g020710 33.333 402 249 7 80 476 4 391 3.37e-55 190
MS.gene071319.t1 MTR_8g077300 32.604 457 276 12 32 476 38 474 4.91e-55 192
MS.gene071319.t1 MTR_7g113970 32.346 405 250 8 80 477 106 493 7.21e-55 192
MS.gene071319.t1 MTR_4g013205 29.613 439 299 5 39 477 42 470 8.16e-55 191
MS.gene071319.t1 MTR_5g020270 32.385 457 271 13 39 480 56 489 8.79e-55 191
MS.gene071319.t1 MTR_1g104770 28.145 469 307 10 39 482 29 492 8.96e-55 191
MS.gene071319.t1 MTR_5g041550 26.346 520 340 10 10 496 5 514 1.53e-54 191
MS.gene071319.t1 MTR_2g020710 33.333 402 249 7 80 476 93 480 1.63e-54 190
MS.gene071319.t1 MTR_8g102860 29.412 476 303 12 37 487 30 497 2.43e-54 191
MS.gene071319.t1 MTR_5g006070 31.731 416 258 10 85 486 44 447 1.89e-53 187
MS.gene071319.t1 MTR_5g020270 33.333 405 235 11 87 476 1 385 2.75e-53 184
MS.gene071319.t1 MTR_4g091370 28.283 495 318 11 31 499 21 504 3.49e-53 187
MS.gene071319.t1 MTR_0204s0020 27.586 464 308 8 39 482 27 482 3.85e-53 187
MS.gene071319.t1 MTR_0204s0020 28.205 468 303 10 39 482 27 485 6.99e-53 186
MS.gene071319.t1 MTR_5g082540 26.721 494 332 8 31 500 21 508 2.75e-52 185
MS.gene071319.t1 MTR_1g038600 28.510 463 311 8 30 482 20 472 5.36e-52 184
MS.gene071319.t1 MTR_7g094110 33.417 398 243 8 85 476 91 472 1.40e-51 182
MS.gene071319.t1 MTR_4g118610 31.529 425 268 9 4 422 23 430 3.94e-51 180
MS.gene071319.t1 MTR_1g038630 28.033 478 312 9 30 482 20 490 4.24e-51 182
MS.gene071319.t1 MTR_4g064820 35.652 345 198 8 42 366 105 445 2.16e-50 179
MS.gene071319.t1 MTR_8g102860 29.756 410 272 9 86 487 44 445 2.80e-50 179
MS.gene071319.t1 MTR_6g087040 29.019 479 311 11 32 487 25 497 3.10e-50 179
MS.gene071319.t1 MTR_6g088375 29.019 479 311 11 32 487 25 497 3.10e-50 179
MS.gene071319.t1 MTR_5g019870 29.119 522 315 10 7 500 1 495 1.79e-49 177
MS.gene071319.t1 MTR_4g116790 27.950 483 319 10 39 498 33 509 1.97e-49 177
MS.gene071319.t1 MTR_5g094760 27.673 477 312 11 30 482 24 491 2.08e-49 177
MS.gene071319.t1 MTR_0204s0040 26.061 495 339 10 9 482 5 493 2.49e-49 177
MS.gene071319.t1 MTR_5g020270 32.450 453 255 14 39 480 56 468 1.06e-48 174
MS.gene071319.t1 MTR_4g090600 27.708 480 317 9 30 484 20 494 4.73e-48 174
MS.gene071319.t1 MTR_4g116770 26.061 495 339 10 9 482 201 689 6.38e-48 176
MS.gene071319.t1 MTR_3g007910 27.706 462 297 9 39 487 28 465 2.07e-47 171
MS.gene071319.t1 MTR_3g074270 26.681 461 301 8 39 482 29 469 1.90e-46 169
MS.gene071319.t1 MTR_3g008160 26.955 486 317 12 30 487 20 495 2.21e-46 169
MS.gene071319.t1 MTR_7g091690 27.083 480 317 11 32 487 26 496 4.46e-46 168
MS.gene071319.t1 MTR_3g008170 27.329 483 316 12 32 487 22 496 2.39e-45 166
MS.gene071319.t1 MTR_3g093060 25.061 411 294 6 85 486 45 450 2.26e-44 162
MS.gene071319.t1 MTR_2g020710 34.139 331 200 6 80 405 93 410 3.72e-44 161
MS.gene071319.t1 MTR_2g020710 33.824 340 204 7 80 414 93 416 6.46e-44 160
MS.gene071319.t1 MTR_3g074390 27.755 490 309 13 39 496 34 510 3.05e-43 160
MS.gene071319.t1 MTR_3g074410 28.025 471 303 13 39 482 31 492 6.76e-43 159
MS.gene071319.t1 MTR_3g008160 27.570 428 290 10 70 487 29 446 4.32e-42 156
MS.gene071319.t1 MTR_8g077310 32.231 363 219 10 39 392 53 397 2.06e-39 147
MS.gene071319.t1 MTR_4g069500 28.746 327 204 7 195 499 2 321 2.31e-39 145
MS.gene071319.t1 MTR_7g094110 29.975 397 238 8 85 476 91 452 2.32e-38 146
MS.gene071319.t1 MTR_7g113960 31.845 336 206 7 36 367 32 348 2.43e-38 144
MS.gene071319.t1 MTR_2g020710 32.653 294 181 5 80 369 93 373 4.34e-37 140
MS.gene071319.t1 MTR_3g116060 37.963 216 129 3 36 249 7 219 3.42e-36 143
MS.gene071319.t1 MTR_3g116060 30.833 240 141 5 266 487 497 729 1.21e-25 111
MS.gene071319.t1 MTR_7g113970 29.664 327 207 6 80 402 106 413 3.44e-36 139
MS.gene071319.t1 MTR_4g116790 28.354 328 212 7 39 348 33 355 1.84e-34 134
MS.gene071319.t1 MTR_3g118530 38.571 210 124 4 43 249 14 221 6.71e-34 135
MS.gene071319.t1 MTR_3g118530 38.571 210 124 4 43 249 14 221 7.90e-34 136
MS.gene071319.t1 MTR_3g118530 31.336 217 138 3 266 473 507 721 7.52e-24 105
MS.gene071319.t1 MTR_5g024740 35.071 211 131 4 36 244 7 213 2.29e-32 131
MS.gene071319.t1 MTR_5g024740 30.085 236 149 5 266 491 489 718 1.10e-18 89.7
MS.gene071319.t1 MTR_5g044910 33.796 216 140 3 36 249 7 221 2.47e-31 128
MS.gene071319.t1 MTR_5g044910 27.966 236 154 5 266 491 487 716 7.97e-14 74.7
MS.gene071319.t1 MTR_6g006260 37.264 212 125 4 232 440 34 240 9.19e-29 114
MS.gene071319.t1 MTR_8g073100 32.883 222 140 5 33 249 4 221 1.57e-27 117
MS.gene071319.t1 MTR_8g073100 28.755 233 150 4 266 488 485 711 7.06e-19 90.5
MS.gene071319.t1 MTR_6g006260 38.298 188 110 3 232 416 35 219 1.84e-27 111
MS.gene071319.t1 MTR_6g006260 39.521 167 98 2 255 421 4 167 4.21e-26 105
MS.gene071319.t1 MTR_3g074380 24.923 325 222 6 39 345 32 352 3.67e-24 104
MS.gene071319.t1 MTR_3g074340 27.869 305 203 9 192 486 31 328 1.86e-22 99.0
MS.gene071319.t1 MTR_3g074370 27.869 305 203 9 192 486 31 328 3.16e-22 98.2
MS.gene071319.t1 MTR_3g074320 26.885 305 206 8 192 486 31 328 6.71e-21 94.4
MS.gene071319.t1 MTR_1g074940 23.045 486 304 17 39 469 27 497 1.87e-19 91.7
MS.gene071319.t1 MTR_3g465780 49.020 102 23 4 50 148 5 80 2.52e-17 79.7
MS.gene071319.t1 MTR_7g096880 24.297 498 289 19 39 469 27 503 3.03e-16 81.6
MS.gene071319.t1 MTR_1g043200 21.834 458 293 14 74 476 68 515 1.12e-15 80.1
MS.gene071319.t1 MTR_5g068140 24.213 508 301 23 39 475 26 520 1.71e-15 79.3
MS.gene071319.t1 MTR_1g069935 22.376 505 306 19 39 476 27 512 2.75e-15 79.0
MS.gene071319.t1 MTR_3g074400 23.604 394 245 9 100 470 57 417 7.47e-15 77.0
MS.gene071319.t1 MTR_1g043220 22.418 455 292 15 75 476 69 515 7.52e-15 77.4
MS.gene071319.t1 MTR_1g043290 22.418 455 292 15 75 476 69 515 1.02e-14 77.0
MS.gene071319.t1 MTR_5g096000 32.000 150 94 2 39 185 28 172 2.91e-14 73.9
MS.gene071319.t1 MTR_4g083960 21.888 498 311 17 39 476 26 505 9.11e-14 73.9
MS.gene071319.t1 MTR_7g094420 31.788 151 75 3 285 433 1 125 2.60e-13 67.4
MS.gene071319.t1 MTR_1g074930 23.026 456 290 16 74 476 68 515 2.64e-13 72.4
MS.gene071319.t1 MTR_3g082700 22.172 442 282 15 81 469 76 508 6.52e-13 71.2
MS.gene071319.t1 MTR_2g081930 28.804 184 120 7 84 262 132 309 3.04e-11 66.2
MS.gene071319.t1 MTR_4g005090 29.474 190 130 3 71 259 64 250 9.38e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071319.t1 AT2G43330 72.798 511 124 4 1 500 3 509 0.0 727
MS.gene071319.t1 AT1G30220 60.000 345 135 1 28 369 23 367 6.71e-129 387
MS.gene071319.t1 AT1G30220 52.817 142 57 3 364 500 443 579 2.93e-39 150
MS.gene071319.t1 AT2G35740 52.557 352 157 2 31 374 24 373 3.58e-123 372
MS.gene071319.t1 AT2G35740 51.327 113 53 1 364 476 446 556 6.65e-30 123
MS.gene071319.t1 AT4G16480 55.043 347 150 1 28 368 22 368 1.71e-118 360
MS.gene071319.t1 AT4G16480 53.097 113 51 1 364 476 447 557 3.46e-30 124
MS.gene071319.t1 AT4G16480 55.043 347 150 1 28 368 22 368 1.71e-118 360
MS.gene071319.t1 AT4G16480 53.097 113 51 1 364 476 447 557 3.46e-30 124
MS.gene071319.t1 AT4G16480 55.043 347 150 1 28 368 22 368 1.71e-118 360
MS.gene071319.t1 AT4G16480 53.097 113 51 1 364 476 447 557 3.46e-30 124
MS.gene071319.t1 AT5G16150 36.404 445 274 5 33 477 105 540 1.72e-76 250
MS.gene071319.t1 AT5G16150 36.404 445 274 5 33 477 105 540 1.72e-76 250
MS.gene071319.t1 AT5G16150 36.404 445 274 5 33 477 105 540 1.72e-76 250
MS.gene071319.t1 AT4G36670 31.950 482 299 8 30 487 14 490 5.09e-73 239
MS.gene071319.t1 AT2G20780 32.265 468 297 7 30 486 52 510 7.47e-70 232
MS.gene071319.t1 AT3G18830 32.285 477 297 8 29 484 32 503 1.17e-69 232
MS.gene071319.t1 AT5G59250 34.354 457 268 10 42 476 107 553 1.23e-69 233
MS.gene071319.t1 AT2G16120 30.579 484 313 5 29 492 22 502 8.26e-68 226
MS.gene071319.t1 AT2G18480 33.120 468 292 6 30 479 19 483 1.04e-67 226
MS.gene071319.t1 AT2G16130 30.143 491 317 6 29 499 22 506 2.44e-67 225
MS.gene071319.t1 AT5G17010 33.061 490 291 11 13 476 21 499 2.51e-66 222
MS.gene071319.t1 AT5G17010 33.061 490 291 11 13 476 21 499 2.51e-66 222
MS.gene071319.t1 AT5G17010 33.061 490 291 11 13 476 21 499 2.51e-66 222
MS.gene071319.t1 AT1G05030 33.482 448 284 7 38 482 84 520 3.21e-62 212
MS.gene071319.t1 AT5G26250 30.146 481 304 10 22 480 15 485 1.08e-61 210
MS.gene071319.t1 AT2G48020 32.833 466 285 11 22 478 14 460 1.67e-61 208
MS.gene071319.t1 AT2G48020 32.833 466 285 11 22 478 14 460 1.67e-61 208
MS.gene071319.t1 AT2G20780 32.767 412 260 6 86 486 47 452 3.66e-61 207
MS.gene071319.t1 AT3G03090 32.018 456 277 8 42 476 56 499 1.28e-60 207
MS.gene071319.t1 AT1G75220 33.333 459 276 14 33 480 48 487 8.43e-60 204
MS.gene071319.t1 AT1G07340 28.903 474 307 8 37 489 27 491 3.27e-59 203
MS.gene071319.t1 AT5G27360 31.828 443 279 9 39 476 41 465 1.08e-57 199
MS.gene071319.t1 AT1G05030 33.025 433 276 7 53 482 47 468 2.41e-57 197
MS.gene071319.t1 AT5G27360 31.828 443 279 9 39 476 89 513 3.18e-57 199
MS.gene071319.t1 AT3G05960 28.870 478 312 9 32 487 20 491 7.41e-57 197
MS.gene071319.t1 AT5G26340 30.539 501 299 16 30 495 20 506 8.40e-57 197
MS.gene071319.t1 AT1G50310 27.917 480 317 9 32 487 24 498 7.24e-55 192
MS.gene071319.t1 AT1G19450 32.969 458 279 13 33 480 49 488 9.11e-55 191
MS.gene071319.t1 AT3G05400 31.931 404 253 8 80 477 70 457 1.16e-54 190
MS.gene071319.t1 AT1G11260 27.745 501 326 12 30 500 20 514 4.37e-54 190
MS.gene071319.t1 AT5G27350 32.360 445 276 10 39 477 37 462 5.55e-54 189
MS.gene071319.t1 AT4G21480 29.158 487 314 11 32 493 22 502 1.34e-53 188
MS.gene071319.t1 AT1G79820 30.621 467 307 7 11 477 39 488 1.67e-53 188
MS.gene071319.t1 AT1G79820 30.621 467 307 7 11 477 39 488 1.67e-53 188
MS.gene071319.t1 AT5G23270 28.807 486 313 12 32 490 23 502 4.06e-52 184
MS.gene071319.t1 AT3G05150 33.666 401 239 11 85 476 84 466 1.05e-51 182
MS.gene071319.t1 AT3G05150 33.666 401 239 11 85 476 84 466 1.05e-51 182
MS.gene071319.t1 AT3G05150 33.173 416 247 13 85 487 84 481 1.46e-51 182
MS.gene071319.t1 AT3G05155 31.279 438 270 12 47 476 41 455 3.41e-51 181
MS.gene071319.t1 AT3G19940 26.667 480 321 9 32 486 24 497 6.08e-51 181
MS.gene071319.t1 AT1G77210 28.715 498 310 16 18 486 16 497 7.00e-51 181
MS.gene071319.t1 AT1G77210 28.715 498 310 16 18 486 16 497 7.00e-51 181
MS.gene071319.t1 AT5G18840 30.490 469 300 9 16 476 25 475 8.47e-51 180
MS.gene071319.t1 AT5G27360 32.086 374 234 7 108 476 3 361 1.13e-50 177
MS.gene071319.t1 AT5G27360 32.086 374 234 7 108 476 3 361 1.13e-50 177
MS.gene071319.t1 AT1G67300 28.145 469 324 6 13 477 29 488 2.15e-49 177
MS.gene071319.t1 AT3G05165 30.402 398 255 7 85 476 79 460 2.26e-49 176
MS.gene071319.t1 AT3G05165 30.402 398 255 7 85 476 79 460 2.26e-49 176
MS.gene071319.t1 AT3G05165 30.402 398 255 7 85 476 79 460 2.26e-49 176
MS.gene071319.t1 AT1G54730 30.290 449 278 12 39 476 38 462 2.64e-49 176
MS.gene071319.t1 AT4G02050 28.803 493 312 13 32 496 26 507 2.81e-49 177
MS.gene071319.t1 AT4G02050 28.803 493 312 13 32 496 26 507 2.81e-49 177
MS.gene071319.t1 AT3G05400 30.941 404 237 10 80 477 70 437 7.26e-49 174
MS.gene071319.t1 AT3G05160 30.479 397 256 7 85 476 21 402 1.17e-48 173
MS.gene071319.t1 AT3G05160 30.479 397 256 7 85 476 21 402 1.17e-48 173
MS.gene071319.t1 AT4G04750 28.931 477 312 12 11 476 8 468 2.17e-48 174
MS.gene071319.t1 AT4G04750 28.931 477 312 12 11 476 8 468 2.17e-48 174
MS.gene071319.t1 AT1G67300 27.623 467 328 5 13 477 29 487 3.13e-48 174
MS.gene071319.t1 AT1G67300 27.623 467 328 5 13 477 29 487 3.13e-48 174
MS.gene071319.t1 AT1G08930 28.989 445 289 9 39 476 64 488 3.67e-48 174
MS.gene071319.t1 AT1G08930 28.989 445 289 9 39 476 64 488 3.67e-48 174
MS.gene071319.t1 AT3G05160 30.730 397 255 7 85 476 70 451 4.28e-48 172
MS.gene071319.t1 AT4G04750 28.721 477 313 12 11 476 52 512 4.35e-48 174
MS.gene071319.t1 AT3G19930 26.600 500 335 11 13 486 2 495 1.08e-47 172
MS.gene071319.t1 AT3G19930 26.600 500 335 11 13 486 2 495 1.08e-47 172
MS.gene071319.t1 AT4G04760 30.542 406 267 7 80 481 16 410 1.99e-47 170
MS.gene071319.t1 AT4G04760 30.542 406 267 7 80 481 75 469 9.05e-47 169
MS.gene071319.t1 AT1G08890 29.353 402 264 8 80 476 71 457 3.48e-46 167
MS.gene071319.t1 AT1G54730 29.078 423 256 11 61 476 56 441 6.15e-46 166
MS.gene071319.t1 AT1G79820 30.435 414 271 7 11 424 39 435 6.33e-46 166
MS.gene071319.t1 AT1G54730 30.026 383 240 10 61 433 56 420 1.37e-43 160
MS.gene071319.t1 AT5G27360 31.967 366 227 8 39 399 41 389 1.88e-43 159
MS.gene071319.t1 AT1G67300 27.470 415 291 5 13 425 29 435 6.02e-43 158
MS.gene071319.t1 AT1G67300 27.470 415 291 5 13 425 29 435 6.02e-43 158
MS.gene071319.t1 AT1G34580 27.484 473 309 10 39 484 30 495 7.40e-43 159
MS.gene071319.t1 AT3G05165 31.268 355 223 7 85 433 79 418 2.02e-42 158
MS.gene071319.t1 AT3G05165 30.986 355 224 7 85 433 79 418 2.71e-42 157
MS.gene071319.t1 AT3G05165 30.986 355 224 7 85 433 79 418 2.71e-42 157
MS.gene071319.t1 AT1G67300 27.930 401 279 5 13 411 29 421 4.67e-42 155
MS.gene071319.t1 AT1G67300 27.930 401 279 5 13 411 29 421 4.67e-42 155
MS.gene071319.t1 AT3G20460 29.250 400 257 9 85 476 102 483 8.02e-42 156
MS.gene071319.t1 AT4G04760 29.630 405 269 7 80 481 75 466 1.05e-41 155
MS.gene071319.t1 AT1G08900 27.543 403 270 8 80 476 27 413 6.70e-41 152
MS.gene071319.t1 AT1G08900 27.543 403 270 8 80 476 61 447 1.63e-40 152
MS.gene071319.t1 AT1G08900 27.543 403 270 8 80 476 69 455 2.17e-40 152
MS.gene071319.t1 AT1G08900 27.543 403 270 8 80 476 69 455 2.17e-40 152
MS.gene071319.t1 AT1G54730 28.947 380 227 10 61 433 56 399 3.70e-40 150
MS.gene071319.t1 AT1G34580 27.483 433 297 8 62 484 20 445 4.69e-40 150
MS.gene071319.t1 AT5G61520 25.355 493 332 10 32 495 23 508 5.32e-39 149
MS.gene071319.t1 AT1G08920 29.529 403 252 9 85 476 81 462 5.49e-39 148
MS.gene071319.t1 AT3G51490 39.450 218 125 4 36 249 7 221 1.09e-37 147
MS.gene071319.t1 AT3G51490 32.569 218 134 3 266 473 500 714 1.52e-26 114
MS.gene071319.t1 AT3G51490 39.450 218 125 4 36 249 7 221 1.09e-37 147
MS.gene071319.t1 AT3G51490 33.175 211 134 4 266 473 500 706 1.87e-22 101
MS.gene071319.t1 AT1G50310 26.934 349 243 7 146 487 12 355 2.29e-37 141
MS.gene071319.t1 AT2G48020 30.458 371 231 10 22 383 14 366 2.65e-37 141
MS.gene071319.t1 AT1G54730 30.056 356 219 10 61 405 56 392 9.95e-37 140
MS.gene071319.t1 AT1G54730 30.056 356 219 10 61 405 56 392 9.95e-37 140
MS.gene071319.t1 AT5G17010 27.236 492 257 11 13 476 18 436 2.10e-36 140
MS.gene071319.t1 AT1G08920 29.024 410 252 10 85 476 81 469 2.30e-36 140
MS.gene071319.t1 AT1G79820 27.837 467 272 9 11 477 39 440 3.74e-35 137
MS.gene071319.t1 AT1G08900 27.778 360 239 7 80 433 69 413 9.61e-35 135
MS.gene071319.t1 AT5G61520 25.694 432 308 8 70 495 36 460 1.16e-34 135
MS.gene071319.t1 AT1G20840 36.866 217 130 4 36 249 7 219 3.97e-34 137
MS.gene071319.t1 AT1G20840 31.193 218 139 3 265 473 498 713 5.24e-22 100
MS.gene071319.t1 AT1G20840 36.866 217 130 4 36 249 7 219 3.97e-34 137
MS.gene071319.t1 AT1G20840 31.193 218 139 3 265 473 498 713 5.24e-22 100
MS.gene071319.t1 AT1G54730 28.693 352 208 10 61 405 56 371 1.21e-33 131
MS.gene071319.t1 AT1G08920 29.050 358 227 7 85 433 81 420 2.65e-33 132
MS.gene071319.t1 AT1G77210 27.794 349 233 10 148 486 9 348 2.83e-33 129
MS.gene071319.t1 AT2G48020 30.240 334 207 9 22 347 14 329 3.17e-32 127
MS.gene071319.t1 AT3G05155 30.164 305 189 8 47 347 41 325 9.28e-31 122
MS.gene071319.t1 AT4G35300 37.321 209 128 3 43 249 14 221 9.33e-31 127
MS.gene071319.t1 AT4G35300 31.982 222 130 3 266 473 496 710 2.77e-27 116
MS.gene071319.t1 AT4G35300 37.321 209 128 3 43 249 14 221 9.33e-31 127
MS.gene071319.t1 AT4G35300 31.982 222 130 3 266 473 496 710 2.77e-27 116
MS.gene071319.t1 AT4G35300 37.321 209 128 3 43 249 14 221 9.33e-31 127
MS.gene071319.t1 AT4G35300 31.982 222 130 3 266 473 496 710 2.77e-27 116
MS.gene071319.t1 AT4G35300 37.321 209 128 3 43 249 14 221 9.88e-31 127
MS.gene071319.t1 AT4G35300 31.982 222 130 3 266 473 506 720 3.13e-27 116
MS.gene071319.t1 AT4G35300 37.321 209 128 3 43 249 14 221 9.88e-31 127
MS.gene071319.t1 AT4G35300 31.982 222 130 3 266 473 506 720 3.13e-27 116
MS.gene071319.t1 AT4G35300 37.321 209 128 3 43 249 14 221 9.88e-31 127
MS.gene071319.t1 AT4G35300 31.982 222 130 3 266 473 506 720 3.13e-27 116
MS.gene071319.t1 AT4G35300 37.321 209 128 3 43 249 14 221 9.88e-31 127
MS.gene071319.t1 AT4G35300 31.982 222 130 3 266 473 506 720 3.13e-27 116
MS.gene071319.t1 AT4G35300 37.321 209 128 3 43 249 14 221 9.88e-31 127
MS.gene071319.t1 AT4G35300 31.982 222 130 3 266 473 506 720 3.13e-27 116
MS.gene071319.t1 AT4G35300 37.321 209 128 3 43 249 14 221 9.88e-31 127
MS.gene071319.t1 AT4G35300 31.982 222 130 3 266 473 506 720 3.13e-27 116
MS.gene071319.t1 AT4G35300 37.321 209 128 3 43 249 14 221 9.88e-31 127
MS.gene071319.t1 AT4G35300 31.982 222 130 3 266 473 506 720 3.13e-27 116
MS.gene071319.t1 AT3G51490 40.462 173 97 3 81 249 1 171 5.58e-29 121
MS.gene071319.t1 AT3G51490 32.569 218 134 3 266 473 450 664 1.45e-26 114
MS.gene071319.t1 AT1G54730 28.349 321 193 8 39 347 38 333 5.09e-28 114
MS.gene071319.t1 AT4G35300 31.982 222 130 3 266 473 309 523 1.27e-27 116
MS.gene071319.t1 AT1G54730 29.537 281 175 8 39 312 38 302 9.78e-25 105
MS.gene071319.t1 AT1G54730 29.537 281 175 8 39 312 38 302 9.78e-25 105
MS.gene071319.t1 AT1G79820 26.934 349 198 6 129 477 87 378 9.62e-22 97.4
MS.gene071319.t1 AT5G43340 23.203 487 313 16 39 476 28 502 3.26e-18 87.8
MS.gene071319.t1 AT5G43350 22.717 449 284 14 81 476 76 514 1.46e-15 79.7
MS.gene071319.t1 AT3G54700 21.980 505 307 18 39 476 27 511 1.66e-15 79.7
MS.gene071319.t1 AT3G54700 21.980 505 307 18 39 476 27 511 1.66e-15 79.7
MS.gene071319.t1 AT2G32830 23.160 462 290 15 81 487 76 527 2.94e-14 75.5
MS.gene071319.t1 AT1G76430 21.989 523 327 16 39 496 25 531 4.10e-14 75.1
MS.gene071319.t1 AT2G38940 22.650 468 262 19 81 476 76 515 4.16e-14 75.1
MS.gene071319.t1 AT5G43360 23.556 450 279 18 81 476 76 514 4.95e-14 74.7
MS.gene071319.t1 AT5G43370 23.163 449 282 15 81 476 76 514 4.15e-13 72.0
MS.gene071319.t1 AT5G43370 23.163 449 282 15 81 476 76 514 4.15e-13 72.0

Find 143 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGATGGATGCTTGGTGTTTC+AGG 0.209762 7.1:-87912414 MS.gene071319:CDS
TCCGCCCTGTGTTGTCAATA+AGG 0.252946 7.1:+87910573 None:intergenic
AAAATTAGCCCTTTCTAGTT+TGG 0.272793 7.1:-87910549 MS.gene071319:CDS
ATTTGATAGTACTCCTTCTT+TGG 0.285757 7.1:+87912117 None:intergenic
TCTTTACTTGAGCAGGTTCC+CGG 0.288713 7.1:-87912444 MS.gene071319:intron
TTGATGAAGTGGAGTTAATA+TGG 0.290617 7.1:-87910163 MS.gene071319:CDS
GCAATTGTTGGTGCGGCATT+TGG 0.313970 7.1:-87913176 MS.gene071319:CDS
CTATGACTTGTCTCGCTTAG+AGG 0.318166 7.1:-87912180 MS.gene071319:CDS
TTTAAGAATCCTTACATTCT+CGG 0.320225 7.1:-87914490 MS.gene071319:CDS
AATAGCCATCTTGGAGATTC+GGG 0.324358 7.1:+87912351 None:intergenic
GGTTTCTTCTCGCCAGGAAT+GGG 0.325212 7.1:-87910416 MS.gene071319:CDS
AGGACGTCTTCTCGTTGGTT+TGG 0.329513 7.1:-87913039 MS.gene071319:CDS
TTTGGCGCTCTTGTTCAGAT+TGG 0.330213 7.1:+87912135 None:intergenic
CTTCTGTCCCTCATAGTTGC+TGG 0.331588 7.1:-87910629 MS.gene071319:CDS
GGACGTCTTCTCGTTGGTTT+GGG 0.335867 7.1:-87913038 MS.gene071319:CDS
CACGGAACCGGCCCCATTCC+TGG 0.339933 7.1:+87910404 None:intergenic
CTTTCGATTGCTGATGCTAT+CGG 0.340489 7.1:-87910278 MS.gene071319:CDS
GAAGGAGTACTATCAAATTC+TGG 0.348041 7.1:-87912112 MS.gene071319:CDS
CCTTGTTGGAGGAGGACTTC+TGG 0.348242 7.1:-87912054 MS.gene071319:intron
GCTGATGTTATCTTTATTCT+CGG 0.359833 7.1:-87913107 MS.gene071319:CDS
TCCAAGATGGCTATTTATAA+AGG 0.360970 7.1:-87912343 MS.gene071319:intron
CTTCTCGTTGGTTTGGGTGT+TGG 0.361620 7.1:-87913032 MS.gene071319:CDS
CAGTCAACACCGGGAAGTTC+AGG 0.361662 7.1:-87914550 MS.gene071319:CDS
ATTGTTAGCATGGCAATTGC+TGG 0.361701 7.1:-87913200 MS.gene071319:CDS
CATATACCTCGATATTCTTC+AGG 0.362604 7.1:+87910359 None:intergenic
TCAAGAAGGTTCTGTGTGTT+TGG 0.367163 7.1:+87910116 None:intergenic
AAATAGCCATCTTGGAGATT+CGG 0.367232 7.1:+87912350 None:intergenic
ACCTTTATAAATAGCCATCT+TGG 0.369335 7.1:+87912342 None:intergenic
AATGCCATCGGAACAATTCT+TGG 0.369947 7.1:-87910602 MS.gene071319:CDS
TATGGATGGCTTGCAGTTAT+CGG 0.374754 7.1:-87910455 MS.gene071319:CDS
TCACTCACAGGTGTGATATC+AGG 0.378447 7.1:-87914314 MS.gene071319:intron
CTTGTTCAGATTGGGCAGTT+AGG 0.383539 7.1:+87912144 None:intergenic
GCGAGAAGAAACCAATATAA+AGG 0.399652 7.1:+87910426 None:intergenic
AACGTCAATCCTTGAGTCTC+TGG 0.402613 7.1:+87910185 None:intergenic
CTCGGCCTCGCCGCTGTCGC+TGG 0.405146 7.1:-87914472 MS.gene071319:CDS
TTGGCGCTCTTGTTCAGATT+GGG 0.415671 7.1:+87912136 None:intergenic
TCTAAGTAACCTGAACTTCC+CGG 0.418574 7.1:+87914541 None:intergenic
ACCAGACTGGCGTTCCTTGT+TGG 0.424230 7.1:-87912068 MS.gene071319:CDS
CTCGCCGCTGTCGCTGGTAT+CGG 0.425075 7.1:-87914466 MS.gene071319:CDS
TGGTTTCTTCTCGCCAGGAA+TGG 0.436052 7.1:-87910417 MS.gene071319:CDS
GCAATTGCTGGGGCAATTGT+TGG 0.436608 7.1:-87913188 MS.gene071319:CDS
CTCGGAAATCAGAGGTTCAT+TGG 0.438079 7.1:-87912964 MS.gene071319:CDS
CAGTCCAACCATTGTTCAAA+TGG 0.439282 7.1:-87910681 MS.gene071319:CDS
ATCGGGTTAGGCCTTTATAT+TGG 0.446222 7.1:-87910437 MS.gene071319:CDS
TTAGCCCTTTCTAGTTTGGC+AGG 0.447489 7.1:-87910545 MS.gene071319:CDS
GGTGTTGACTGCATAGCTAT+TGG 0.447902 7.1:+87914562 None:intergenic
ATGGATGGCTTGCAGTTATC+GGG 0.453710 7.1:-87910454 MS.gene071319:CDS
CCAACCATTGTTCAAATGGC+TGG 0.456030 7.1:-87910677 MS.gene071319:CDS
GATCCTTATGTTCTCATAGT+AGG 0.456265 7.1:-87913059 MS.gene071319:CDS
TATATTGGTTTCTTCTCGCC+AGG 0.457823 7.1:-87910422 MS.gene071319:CDS
CGTCCTACTATGAGAACATA+AGG 0.458611 7.1:+87913056 None:intergenic
GAAAACAAGGTTAACAAGAT+AGG 0.459774 7.1:+87912899 None:intergenic
GCGGCGAGGCCGAGAATGTA+AGG 0.463018 7.1:+87914481 None:intergenic
TCCAACAAGGAACGCCAGTC+TGG 0.464117 7.1:+87912067 None:intergenic
TTTCGATTGCTGATGCTATC+GGG 0.465245 7.1:-87910277 MS.gene071319:CDS
AAGCATCCATCGCCATGTCC+CGG 0.467554 7.1:+87912425 None:intergenic
TTACTCCTGCCAAACTAGAA+AGG 0.476196 7.1:+87910540 None:intergenic
GGAAGAGCATGCAAACGAAC+TGG 0.479630 7.1:+87912376 None:intergenic
GAGTTTATAGTCCACGGAAC+CGG 0.483842 7.1:+87910392 None:intergenic
TCGTCTACAAATGAAGTGTA+TGG 0.484885 7.1:-87910473 MS.gene071319:CDS
AGGATTGACGTTTGATGAAG+TGG 0.485530 7.1:-87910174 MS.gene071319:CDS
TTGTTAGCATGGCAATTGCT+GGG 0.486051 7.1:-87913199 MS.gene071319:CDS
CTGGCGTTCCTTGTTGGAGG+AGG 0.486306 7.1:-87912062 MS.gene071319:CDS
CATTCATGCCAGCAACTATG+AGG 0.487150 7.1:+87910621 None:intergenic
TGGCTTGCAGTTATCGGGTT+AGG 0.491646 7.1:-87910449 MS.gene071319:CDS
AGCATCCATCGCCATGTCCC+GGG 0.496051 7.1:+87912426 None:intergenic
TCAGGAAACAATTGTTAGCA+TGG 0.497177 7.1:-87913210 MS.gene071319:intron
TACTCCTGCCAAACTAGAAA+GGG 0.498954 7.1:+87910541 None:intergenic
AAGAAAGACATCTTACGATC+AGG 0.501284 7.1:+87914511 None:intergenic
GGGACATGGCGATGGATGCT+TGG 0.501504 7.1:-87912423 MS.gene071319:CDS
ATAGTAGGACGTCTTCTCGT+TGG 0.501504 7.1:-87913044 MS.gene071319:CDS
TATTGCAGAAGTTGCACCCT+CGG 0.503905 7.1:-87912982 MS.gene071319:CDS
CACTAACCTGGGTGAAAACA+AGG 0.504314 7.1:+87912886 None:intergenic
CACACAGAACCTTCTTGAGC+AGG 0.507514 7.1:-87910111 MS.gene071319:CDS
CTTCTCGCCAGGAATGGGGC+CGG 0.507730 7.1:-87910411 MS.gene071319:CDS
TGGCTTCCATGCCAATCAGT+TGG 0.508341 7.1:-87910657 MS.gene071319:CDS
TTGGTGCGGCATTTGGTGGT+TGG 0.509018 7.1:-87913169 MS.gene071319:CDS
TTGAGCAGGTTCCCGGGACA+TGG 0.510334 7.1:-87912437 MS.gene071319:intron
CAGAAGAAGAGCCAACTGAT+TGG 0.510832 7.1:+87910646 None:intergenic
CCAGCCATTTGAACAATGGT+TGG 0.513134 7.1:+87910677 None:intergenic
ACTATGAGAACATAAGGATC+AGG 0.518872 7.1:+87913062 None:intergenic
AGACTGGCGTTCCTTGTTGG+AGG 0.519119 7.1:-87912065 MS.gene071319:CDS
GGTTGGCTTAATGACGCATA+TGG 0.525612 7.1:-87913152 MS.gene071319:CDS
AAATTACTGTTTCTAACTTG+AGG 0.525803 7.1:+87914263 None:intergenic
GATTATTGCTGTTATAGCTG+TGG 0.528634 7.1:-87910237 MS.gene071319:CDS
CTGAACAAGAGCGCCAAAGA+AGG 0.532705 7.1:-87912130 MS.gene071319:CDS
GCAACTTCTGCAATATAGAC+AGG 0.533689 7.1:+87912990 None:intergenic
ATTGTTGGTGCGGCATTTGG+TGG 0.535184 7.1:-87913173 MS.gene071319:CDS
CAGGAATGGGGCCGGTTCCG+TGG 0.539224 7.1:-87910403 MS.gene071319:CDS
GCATGGCAGCTACTGTATGT+TGG 0.540274 7.1:-87910331 MS.gene071319:CDS
ATCTCTGAGTTTATAGTCCA+CGG 0.540648 7.1:+87910386 None:intergenic
CTTTACTTGAGCAGGTTCCC+GGG 0.544126 7.1:-87912443 MS.gene071319:intron
CTGTATGTTCCAGAGACTCA+AGG 0.555136 7.1:-87910194 MS.gene071319:CDS
AGCAATCGAAAGAAAGCTCT+CGG 0.559447 7.1:+87910289 None:intergenic
ATTGACTTCCCTGCTCAAGA+AGG 0.561405 7.1:+87910102 None:intergenic
AGGTTCCCGGGACATGGCGA+TGG 0.566906 7.1:-87912431 MS.gene071319:CDS
CTACAAATGAAGTGTATGGA+TGG 0.568756 7.1:-87910469 MS.gene071319:CDS
ATTTACCTTATTGACAACAC+AGG 0.569729 7.1:-87910578 MS.gene071319:CDS
AATAGCTATGCAGTCAACAC+CGG 0.570076 7.1:-87914560 MS.gene071319:CDS
GTTTCTTCTCGCCAGGAATG+GGG 0.577322 7.1:-87910415 MS.gene071319:CDS
ACCACCGATACCAGCGACAG+CGG 0.577749 7.1:+87914462 None:intergenic
TGCTACGGCCAACATTATCA+AGG 0.580783 7.1:+87910511 None:intergenic
TGCTGGGGCAATTGTTGGTG+CGG 0.580970 7.1:-87913183 MS.gene071319:CDS
TAATATGGAAGGAGAGAGCA+TGG 0.581818 7.1:-87910148 MS.gene071319:CDS
TATTCTCGGAGCAATTCTCA+TGG 0.581928 7.1:-87913093 MS.gene071319:CDS
TCGAGGTATATGCGGTGGCA+TGG 0.583737 7.1:-87910348 MS.gene071319:CDS
GCCGCTGTCGCTGGTATCGG+TGG 0.584428 7.1:-87914463 MS.gene071319:CDS
TGACGCATATGGAAGAAAGA+AGG 0.585693 7.1:-87913141 MS.gene071319:CDS
TGACTGTTTGTAAAATGCTA+CGG 0.587742 7.1:+87910496 None:intergenic
GAAGAGCCAACTGATTGGCA+TGG 0.588366 7.1:+87910651 None:intergenic
TCCTCCCCGAATCTCCAAGA+TGG 0.592468 7.1:-87912356 MS.gene071319:CDS
TATTGCTGTTATAGCTGTGG+TGG 0.596413 7.1:-87910234 MS.gene071319:CDS
CAAACGAACTGGATAAGTGC+AGG 0.598086 7.1:+87912387 None:intergenic
ATAGCTATGCAGTCAACACC+GGG 0.599023 7.1:-87914559 MS.gene071319:CDS
TGAAGTGGAGTTAATATGGA+AGG 0.600864 7.1:-87910159 MS.gene071319:CDS
AATCGCGTCCTTGATAATGT+TGG 0.605908 7.1:-87910519 MS.gene071319:CDS
ACTAATGTCCTCATGATCAC+CGG 0.612284 7.1:-87912936 MS.gene071319:CDS
CAGATCAAAAGAAACCAGAC+TGG 0.614664 7.1:-87912081 MS.gene071319:CDS
GAAGCCAGCCATTTGAACAA+TGG 0.616970 7.1:+87910673 None:intergenic
GTTGCTGGCATGAATGCCAT+CGG 0.618864 7.1:-87910614 MS.gene071319:CDS
TTTACCTTATTGACAACACA+GGG 0.623173 7.1:-87910577 MS.gene071319:CDS
TGTTAGCATGGCAATTGCTG+GGG 0.623805 7.1:-87913198 MS.gene071319:CDS
CCAGAAGTCCTCCTCCAACA+AGG 0.625601 7.1:+87912054 None:intergenic
ACTGTCCACCGGTGATCATG+AGG 0.626959 7.1:+87912928 None:intergenic
CAATGAACCTCTGATTTCCG+AGG 0.627531 7.1:+87912965 None:intergenic
ATTCATGCCAGCAACTATGA+GGG 0.628223 7.1:+87910622 None:intergenic
ACACAGAACCTTCTTGAGCA+GGG 0.631524 7.1:-87910110 MS.gene071319:CDS
ATATGGAAGGAGAGAGCATG+GGG 0.643029 7.1:-87910146 MS.gene071319:CDS
GAATATCGAGGTATATGCGG+TGG 0.648219 7.1:-87910353 MS.gene071319:CDS
AATGCCAAGAATTGTTCCGA+TGG 0.654064 7.1:+87910598 None:intergenic
AATGAACCTCTGATTTCCGA+GGG 0.654989 7.1:+87912966 None:intergenic
GTTGCACCCTCGGAAATCAG+AGG 0.655317 7.1:-87912972 MS.gene071319:CDS
AATATGGAAGGAGAGAGCAT+GGG 0.655582 7.1:-87910147 MS.gene071319:CDS
ATAGGAAACGAACTGTCCAC+CGG 0.656607 7.1:+87912917 None:intergenic
AATGTCCTCATGATCACCGG+TGG 0.658464 7.1:-87912933 MS.gene071319:CDS
GAAGAATATCGAGGTATATG+CGG 0.660929 7.1:-87910356 MS.gene071319:CDS
GATAACATCAGCTAAGAGTG+TGG 0.662575 7.1:+87913118 None:intergenic
ACCTTATTGACAACACAGGG+CGG 0.667164 7.1:-87910574 MS.gene071319:CDS
CGATACCAGCGACAGCGGCG+AGG 0.676505 7.1:+87914467 None:intergenic
ATAGCCATCTTGGAGATTCG+GGG 0.688240 7.1:+87912352 None:intergenic
GCAGTTTACAGGTATAAACA+CGG 0.700993 7.1:-87910714 MS.gene071319:CDS
GCCATCTTGGAGATTCGGGG+AGG 0.708360 7.1:+87912355 None:intergenic
ATATATCCTGAAGAATATCG+AGG 0.737528 7.1:-87910365 MS.gene071319:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTTAAAATAAAAAAAA+AGG + chr7.1:87910507-87910526 None:intergenic 0.0%
!! TATTAATTAAAAGTTGTTTA+TGG + chr7.1:87910925-87910944 None:intergenic 10.0%
!! TTATGTTTGAATTATTTATT+AGG + chr7.1:87910309-87910328 None:intergenic 10.0%
!!! AAGATAGTAAAATTTTAAAA+TGG + chr7.1:87912421-87912440 None:intergenic 10.0%
!!! ATATGACATTTTTAATTTAA+CGG + chr7.1:87913741-87913760 None:intergenic 10.0%
!!! ATTTTAAAATTTTACTATCT+TGG - chr7.1:87912420-87912439 MS.gene071319:CDS 10.0%
!!! TATCTAATGTTTTATTTTAT+CGG + chr7.1:87911966-87911985 None:intergenic 10.0%
!! AAATGTTGTTAAAAAGTAAA+CGG - chr7.1:87912200-87912219 MS.gene071319:CDS 15.0%
!! AAGATAATAGTAAGTTAAAT+TGG + chr7.1:87910637-87910656 None:intergenic 15.0%
!! GCTTATACATAATAATAATA+AGG + chr7.1:87910478-87910497 None:intergenic 15.0%
!! TATTTGAATATAAATGACTT+TGG - chr7.1:87913877-87913896 MS.gene071319:intron 15.0%
!! TTAAAGAAGTTATGAAATTA+AGG + chr7.1:87911176-87911195 None:intergenic 15.0%
!!! TTATTTTCATAAGTTTTCAA+AGG + chr7.1:87910804-87910823 None:intergenic 15.0%
!!! TTGTTTTTATAAGCTATTAT+GGG - chr7.1:87911041-87911060 MS.gene071319:intron 15.0%
!! AAATAATAAGTGAATTCAAC+AGG + chr7.1:87911067-87911086 None:intergenic 20.0%
!! AAATTTCAAAACATTGTGTT+TGG - chr7.1:87912038-87912057 MS.gene071319:intron 20.0%
!! AATGTTGTTAAAAAGTAAAC+GGG - chr7.1:87912201-87912220 MS.gene071319:CDS 20.0%
!! AGAAGTAGTTATTATGTATA+AGG + chr7.1:87910674-87910693 None:intergenic 20.0%
!! AGATAAAACAACTTAACTTA+TGG - chr7.1:87910823-87910842 MS.gene071319:intron 20.0%
!! AGCTCTATAAAATATACTTT+AGG - chr7.1:87912984-87913003 MS.gene071319:CDS 20.0%
!! ATTAAAAGTTGTTTATGGAT+TGG + chr7.1:87910920-87910939 None:intergenic 20.0%
!! GCTCTATAAAATATACTTTA+GGG - chr7.1:87912985-87913004 MS.gene071319:CDS 20.0%
!! TACATAAGCAATTATATGAT+TGG + chr7.1:87910964-87910983 None:intergenic 20.0%
!! TATTATTATGTATAAGCCAT+CGG - chr7.1:87910481-87910500 MS.gene071319:CDS 20.0%
!!! CTTGTTTTTATAAGCTATTA+TGG - chr7.1:87911040-87911059 MS.gene071319:intron 20.0%
! AAAACAACTTAACTTATGGA+CGG - chr7.1:87910827-87910846 MS.gene071319:intron 25.0%
! AAAATAAAAAAAAAGGCCGA+TGG + chr7.1:87910500-87910519 None:intergenic 25.0%
! AAACTATTGAAGAGAAACTA+AGG - chr7.1:87913350-87913369 MS.gene071319:intron 25.0%
! AAATTGTGATATAGAGAAGA+TGG + chr7.1:87912102-87912121 None:intergenic 25.0%
! AACTATTGAAGAGAAACTAA+GGG - chr7.1:87913351-87913370 MS.gene071319:intron 25.0%
! AAGCGAGATTTATAGATAAA+TGG - chr7.1:87913530-87913549 MS.gene071319:intron 25.0%
! AATAAGCTGTTTATTCAAAC+AGG - chr7.1:87911267-87911286 MS.gene071319:intron 25.0%
! AATTCATAAGTGATCATACA+AGG - chr7.1:87913308-87913327 MS.gene071319:intron 25.0%
! ACTCTGTTTAAAGAATAAGA+TGG - chr7.1:87913376-87913395 MS.gene071319:intron 25.0%
! AGTATAGTTTAATAGGTAGA+AGG - chr7.1:87913477-87913496 MS.gene071319:intron 25.0%
! AGTTAAATTGGTTGTTGTAT+AGG + chr7.1:87910625-87910644 None:intergenic 25.0%
! ATAAGCTGTTTATTCAAACA+GGG - chr7.1:87911268-87911287 MS.gene071319:intron 25.0%
! ATAAGTGTTAAAAGAGTTTG+TGG - chr7.1:87911311-87911330 MS.gene071319:intron 25.0%
! ATGTTATAAGCTTTCAGAAA+TGG - chr7.1:87910856-87910875 MS.gene071319:intron 25.0%
! ATTGCATTTCATATTCTTAG+GGG - chr7.1:87911912-87911931 MS.gene071319:intron 25.0%
! CAAATAACTTATACATTGTG+CGG - chr7.1:87911243-87911262 MS.gene071319:intron 25.0%
! GATTGCATTTCATATTCTTA+GGG - chr7.1:87911911-87911930 MS.gene071319:intron 25.0%
! GTTAAATTGGTTGTTGTATA+GGG + chr7.1:87910624-87910643 None:intergenic 25.0%
! TAACGGTGTTTATTTAATAC+AGG + chr7.1:87913724-87913743 None:intergenic 25.0%
! TATGAAATTAAGGTGAAAAC+AGG + chr7.1:87911166-87911185 None:intergenic 25.0%
! TGATTGCATTTCATATTCTT+AGG - chr7.1:87911910-87911929 MS.gene071319:intron 25.0%
! TTAAGTGGTTTGAATATTTC+CGG - chr7.1:87913411-87913430 MS.gene071319:intron 25.0%
! TTTAAGAATCCTTACATTCT+CGG - chr7.1:87910178-87910197 MS.gene071319:CDS 25.0%
!! ATTTGACCAATAACTTTTCT+TGG + chr7.1:87913506-87913525 None:intergenic 25.0%
!! GGCTATTTATATTAGCTTAT+TGG + chr7.1:87911392-87911411 None:intergenic 25.0%
!! TGCTGGAAATATTTCATTTT+AGG - chr7.1:87913075-87913094 MS.gene071319:CDS 25.0%
!! TGGTAGAATATCATTTTAAG+TGG - chr7.1:87913396-87913415 MS.gene071319:intron 25.0%
!!! AAATTACTGTTTCTAACTTG+AGG + chr7.1:87910408-87910427 None:intergenic 25.0%
!!! CTTTAAAGTTGATGAATAGT+AGG - chr7.1:87913558-87913577 MS.gene071319:intron 25.0%
!!! TCTATCAACGTGTTTAATTT+TGG - chr7.1:87911859-87911878 MS.gene071319:intron 25.0%
!!! TTTTGGATTTTGTTGCTTTT+TGG - chr7.1:87911876-87911895 MS.gene071319:intron 25.0%
AAGAAACAAGTTTCATTCGA+AGG - chr7.1:87913155-87913174 MS.gene071319:CDS 30.0%
AAGTACTTATGGAAGTAGAT+AGG - chr7.1:87911364-87911383 MS.gene071319:intron 30.0%
ACCTTTATAAATAGCCATCT+TGG + chr7.1:87912329-87912348 None:intergenic 30.0%
AGTTAGAGCATAGTATAGTA+TGG + chr7.1:87910448-87910467 None:intergenic 30.0%
ATATATCCTGAAGAATATCG+AGG - chr7.1:87914303-87914322 MS.gene071319:CDS 30.0%
ATGAAATATTTCCAGCATTG+TGG + chr7.1:87913072-87913091 None:intergenic 30.0%
CAGATGGAGTATAGTTTAAT+AGG - chr7.1:87913470-87913489 MS.gene071319:intron 30.0%
GAAAACAAGGTTAACAAGAT+AGG + chr7.1:87911772-87911791 None:intergenic 30.0%
GCACGGTAATAAATATACAT+AGG + chr7.1:87913201-87913220 None:intergenic 30.0%
GCTGATGTTATCTTTATTCT+CGG - chr7.1:87911561-87911580 MS.gene071319:intron 30.0%
GGTTGAAATCAAAAGACATT+TGG + chr7.1:87912149-87912168 None:intergenic 30.0%
GTAATTATCACTTCACTGTT+TGG + chr7.1:87910724-87910743 None:intergenic 30.0%
TAAAATTGAAACCACAATGC+TGG - chr7.1:87913058-87913077 MS.gene071319:CDS 30.0%
TCAAAACATTGTGTTTGGTT+TGG - chr7.1:87912043-87912062 MS.gene071319:intron 30.0%
TCCAAGATGGCTATTTATAA+AGG - chr7.1:87912325-87912344 MS.gene071319:intron 30.0%
TGACTGTTTGTAAAATGCTA+CGG + chr7.1:87914175-87914194 None:intergenic 30.0%
TGCCAGTAACAAATAAAGTA+TGG + chr7.1:87913829-87913848 None:intergenic 30.0%
TTGATGAAGTGGAGTTAATA+TGG - chr7.1:87914505-87914524 MS.gene071319:CDS 30.0%
! ATGATTGGTGTTTGTGTTAT+AGG + chr7.1:87910949-87910968 None:intergenic 30.0%
! ATTTGATAGTACTCCTTCTT+TGG + chr7.1:87912554-87912573 None:intergenic 30.0%
! GACCATACTTTATTTGTTAC+TGG - chr7.1:87913824-87913843 MS.gene071319:intron 30.0%
! TAGAAACAGTAATTTTCTGC+AGG - chr7.1:87910413-87910432 MS.gene071319:CDS 30.0%
!! AAAATTAGCCCTTTCTAGTT+TGG - chr7.1:87914119-87914138 MS.gene071319:intron 30.0%
AAAGACTAACACACTAACCT+GGG + chr7.1:87911796-87911815 None:intergenic 35.0%
AAATAGCCATCTTGGAGATT+CGG + chr7.1:87912321-87912340 None:intergenic 35.0%
AAGAAAGACATCTTACGATC+AGG + chr7.1:87910160-87910179 None:intergenic 35.0%
AATCACCAAGCTAAAGAAGA+AGG - chr7.1:87912924-87912943 MS.gene071319:CDS 35.0%
ACTATGAGAACATAAGGATC+AGG + chr7.1:87911609-87911628 None:intergenic 35.0%
ACTTTCGTTGATCTTTGACT+TGG - chr7.1:87913660-87913679 MS.gene071319:intron 35.0%
AGGAGACCAAGAAAAGTTAT+TGG - chr7.1:87913497-87913516 MS.gene071319:intron 35.0%
ATCTCTGAGTTTATAGTCCA+CGG + chr7.1:87914285-87914304 None:intergenic 35.0%
CAAAAGTGAGTGTCAGAAAA+AGG + chr7.1:87911426-87911445 None:intergenic 35.0%
CACCAGTGGAATATAGAATA+CGG + chr7.1:87912844-87912863 None:intergenic 35.0%
CAGAAAAAGGAATGATGTAG+AGG + chr7.1:87911413-87911432 None:intergenic 35.0%
CATATACCTCGATATTCTTC+AGG + chr7.1:87914312-87914331 None:intergenic 35.0%
CTACAAATGAAGTGTATGGA+TGG - chr7.1:87914199-87914218 MS.gene071319:intron 35.0%
GAAGAATATCGAGGTATATG+CGG - chr7.1:87914312-87914331 MS.gene071319:intron 35.0%
GAATATTTCCGGAAAAGACT+CGG - chr7.1:87913422-87913441 MS.gene071319:intron 35.0%
GATCCTTATGTTCTCATAGT+AGG - chr7.1:87911609-87911628 MS.gene071319:intron 35.0%
GCAGAATAGGAAAAATGAAG+CGG - chr7.1:87912446-87912465 MS.gene071319:intron 35.0%
GCAGTTTACAGGTATAAACA+CGG - chr7.1:87913954-87913973 MS.gene071319:intron 35.0%
GCGAGAAGAAACCAATATAA+AGG + chr7.1:87914245-87914264 None:intergenic 35.0%
GTTGAATGCATGTTGGAATT+AGG - chr7.1:87913849-87913868 MS.gene071319:intron 35.0%
TAAGTACTTGTGAGACTAGT+TGG + chr7.1:87911353-87911372 None:intergenic 35.0%
TAGAGCATAGTATAGTATGG+AGG + chr7.1:87910445-87910464 None:intergenic 35.0%
TATTTGCATAAGCTCTACCT+AGG + chr7.1:87911294-87911313 None:intergenic 35.0%
TCAGGAAACAATTGTTAGCA+TGG - chr7.1:87911458-87911477 MS.gene071319:intron 35.0%
TCCACACACAAAGTAAAAGT+TGG - chr7.1:87912170-87912189 MS.gene071319:CDS 35.0%
TCGTCTACAAATGAAGTGTA+TGG - chr7.1:87914195-87914214 MS.gene071319:intron 35.0%
TGAAGTGGAGTTAATATGGA+AGG - chr7.1:87914509-87914528 MS.gene071319:CDS 35.0%
TGCATTCTTATTGCATCCAT+TGG - chr7.1:87913915-87913934 MS.gene071319:intron 35.0%
TGCTATACGAGACAAAATGT+TGG - chr7.1:87913238-87913257 MS.gene071319:intron 35.0%
TGGTCAAACAAGAAAGCTAA+TGG + chr7.1:87913809-87913828 None:intergenic 35.0%
TTTGTCTCGTATAGCATTCA+AGG + chr7.1:87913234-87913253 None:intergenic 35.0%
! ACTAGTCTCACAAGTACTTA+TGG - chr7.1:87911353-87911372 MS.gene071319:intron 35.0%
! ACTTTTACTTTGTGTGTGGA+TGG + chr7.1:87912170-87912189 None:intergenic 35.0%
! CTTTTGTGTCTCTCAATTTC+AGG - chr7.1:87911440-87911459 MS.gene071319:intron 35.0%
! GAATTTAGCACTGAGTCTAA+TGG - chr7.1:87913026-87913045 MS.gene071319:CDS 35.0%
! GATTATTGCTGTTATAGCTG+TGG - chr7.1:87914431-87914450 MS.gene071319:intron 35.0%
! TCCAACTTTTACTTTGTGTG+TGG + chr7.1:87912174-87912193 None:intergenic 35.0%
! TGGTTGTTGTATAGGGTATT+AGG + chr7.1:87910617-87910636 None:intergenic 35.0%
! TTCATGCTTTTCTTGTGTGT+GGG - chr7.1:87911814-87911833 MS.gene071319:intron 35.0%
! TTTCATGCTTTTCTTGTGTG+TGG - chr7.1:87911813-87911832 MS.gene071319:intron 35.0%
!! GAAGGAGTACTATCAAATTC+TGG - chr7.1:87912556-87912575 MS.gene071319:intron 35.0%
AATAGCCATCTTGGAGATTC+GGG + chr7.1:87912320-87912339 None:intergenic 40.0%
AATAGCTATGCAGTCAACAC+CGG - chr7.1:87910108-87910127 MS.gene071319:CDS 40.0%
AATGAACCTCTGATTTCCGA+GGG + chr7.1:87911705-87911724 None:intergenic 40.0%
AATGCCAAGAATTGTTCCGA+TGG + chr7.1:87914073-87914092 None:intergenic 40.0%
AATGCCATCGGAACAATTCT+TGG - chr7.1:87914066-87914085 MS.gene071319:intron 40.0%
ACTAATGTCCTCATGATCAC+CGG - chr7.1:87911732-87911751 MS.gene071319:intron 40.0%
AGCAATCGAAAGAAAGCTCT+CGG + chr7.1:87914382-87914401 None:intergenic 40.0%
AGGATTGACGTTTGATGAAG+TGG - chr7.1:87914494-87914513 MS.gene071319:CDS 40.0%
AGTGAAGAGAATCGATCAGA+TGG - chr7.1:87913454-87913473 MS.gene071319:intron 40.0%
ATTCATGCCAGCAACTATGA+GGG + chr7.1:87914049-87914068 None:intergenic 40.0%
ATTGTTAGCATGGCAATTGC+TGG - chr7.1:87911468-87911487 MS.gene071319:intron 40.0%
CAACTTAACTTATGGACGGA+CGG - chr7.1:87910831-87910850 MS.gene071319:intron 40.0%
CAGATCAAAAGAAACCAGAC+TGG - chr7.1:87912587-87912606 MS.gene071319:intron 40.0%
CAGTCCAACCATTGTTCAAA+TGG - chr7.1:87913987-87914006 MS.gene071319:intron 40.0%
CGTCCTACTATGAGAACATA+AGG + chr7.1:87911615-87911634 None:intergenic 40.0%
CTTTCGATTGCTGATGCTAT+CGG - chr7.1:87914390-87914409 MS.gene071319:intron 40.0%
GAAAGACTAACACACTAACC+TGG + chr7.1:87911797-87911816 None:intergenic 40.0%
GATAACATCAGCTAAGAGTG+TGG + chr7.1:87911553-87911572 None:intergenic 40.0%
GCAACTTCTGCAATATAGAC+AGG + chr7.1:87911681-87911700 None:intergenic 40.0%
GCATAGTATAGTATGGAGGT+AGG + chr7.1:87910441-87910460 None:intergenic 40.0%
GCATTTCATATTCTTAGGGG+TGG - chr7.1:87911915-87911934 MS.gene071319:intron 40.0%
GTCCGTATTCTATATTCCAC+TGG - chr7.1:87912839-87912858 MS.gene071319:intron 40.0%
TAATATGGAAGGAGAGAGCA+TGG - chr7.1:87914520-87914539 MS.gene071319:CDS 40.0%
TACTCCTGCCAAACTAGAAA+GGG + chr7.1:87914130-87914149 None:intergenic 40.0%
TATTCTCGGAGCAATTCTCA+TGG - chr7.1:87911575-87911594 MS.gene071319:intron 40.0%
TCAAGAAGGTTCTGTGTGTT+TGG + chr7.1:87914555-87914574 None:intergenic 40.0%
TCACCTTGTGAGATAAGACT+TGG - chr7.1:87913615-87913634 MS.gene071319:intron 40.0%
TCTAAGTAACCTGAACTTCC+CGG + chr7.1:87910130-87910149 None:intergenic 40.0%
TCTGCAGTACATGTACATCT+GGG + chr7.1:87912380-87912399 None:intergenic 40.0%
TCTTCTTCTTCTTCACTCAC+AGG - chr7.1:87910342-87910361 MS.gene071319:CDS 40.0%
TGACGCATATGGAAGAAAGA+AGG - chr7.1:87911527-87911546 MS.gene071319:intron 40.0%
TGTTTATTCAAACAGGGCCT+AGG - chr7.1:87911274-87911293 MS.gene071319:intron 40.0%
TTACTCCTGCCAAACTAGAA+AGG + chr7.1:87914131-87914150 None:intergenic 40.0%
TTCAAGGTCTTACAACTGCA+CGG + chr7.1:87913218-87913237 None:intergenic 40.0%
TTCCACTGGTGAGAAATCAT+AGG - chr7.1:87912853-87912872 MS.gene071319:intron 40.0%
TTCTGCAGTACATGTACATC+TGG + chr7.1:87912381-87912400 None:intergenic 40.0%
TTGTTAGCATGGCAATTGCT+GGG - chr7.1:87911469-87911488 MS.gene071319:intron 40.0%
TTTCGATTGCTGATGCTATC+GGG - chr7.1:87914391-87914410 MS.gene071319:intron 40.0%
! AATATGGAAGGAGAGAGCAT+GGG - chr7.1:87914521-87914540 MS.gene071319:CDS 40.0%
! ACTATCTTGGTGTGCAGAAT+AGG - chr7.1:87912433-87912452 MS.gene071319:intron 40.0%
! ATACTTCTCCGAGTCTTTTC+CGG + chr7.1:87913433-87913452 None:intergenic 40.0%
! ATCGGGTTAGGCCTTTATAT+TGG - chr7.1:87914231-87914250 MS.gene071319:intron 40.0%
! CAACCAAGTCTTATCTCACA+AGG + chr7.1:87913621-87913640 None:intergenic 40.0%
! GAATGCTCTTTGCTGTCAAT+AGG - chr7.1:87912709-87912728 MS.gene071319:intron 40.0%
! TAGGCTTGTTCTAGACATGT+TGG - chr7.1:87912872-87912891 MS.gene071319:intron 40.0%
! TATGGATGGCTTGCAGTTAT+CGG - chr7.1:87914213-87914232 MS.gene071319:intron 40.0%
! TATTGCTGTTATAGCTGTGG+TGG - chr7.1:87914434-87914453 MS.gene071319:intron 40.0%
!! AATCGCGTCCTTGATAATGT+TGG - chr7.1:87914149-87914168 MS.gene071319:intron 40.0%
!! TATATTGGTTTCTTCTCGCC+AGG - chr7.1:87914246-87914265 MS.gene071319:intron 40.0%
!!! TGTTAACCTTGTTTTCACCC+AGG - chr7.1:87911776-87911795 MS.gene071319:intron 40.0%
AAACGGGTCTTTACTTGAGC+AGG - chr7.1:87912217-87912236 MS.gene071319:CDS 45.0%
AACGTCAATCCTTGAGTCTC+TGG + chr7.1:87914486-87914505 None:intergenic 45.0%
ACACAGAACCTTCTTGAGCA+GGG - chr7.1:87914558-87914577 MS.gene071319:CDS 45.0%
ACTGGCAGTTGAATGCATGT+TGG - chr7.1:87913842-87913861 MS.gene071319:intron 45.0%
AGCCTATGATTTCTCACCAG+TGG + chr7.1:87912858-87912877 None:intergenic 45.0%
ATAGCCATCTTGGAGATTCG+GGG + chr7.1:87912319-87912338 None:intergenic 45.0%
ATAGCTATGCAGTCAACACC+GGG - chr7.1:87910109-87910128 MS.gene071319:CDS 45.0%
ATAGGAAACGAACTGTCCAC+CGG + chr7.1:87911754-87911773 None:intergenic 45.0%
ATAGTAGGACGTCTTCTCGT+TGG - chr7.1:87911624-87911643 MS.gene071319:intron 45.0%
CAAACGAACTGGATAAGTGC+AGG + chr7.1:87912284-87912303 None:intergenic 45.0%
CAATGAACCTCTGATTTCCG+AGG + chr7.1:87911706-87911725 None:intergenic 45.0%
CACTAACCTGGGTGAAAACA+AGG + chr7.1:87911785-87911804 None:intergenic 45.0%
CAGAAGAAGAGCCAACTGAT+TGG + chr7.1:87914025-87914044 None:intergenic 45.0%
CATTCATGCCAGCAACTATG+AGG + chr7.1:87914050-87914069 None:intergenic 45.0%
CCAACCATTGTTCAAATGGC+TGG - chr7.1:87913991-87914010 MS.gene071319:intron 45.0%
CCAGCCATTTGAACAATGGT+TGG + chr7.1:87913994-87914013 None:intergenic 45.0%
CTCGGAAATCAGAGGTTCAT+TGG - chr7.1:87911704-87911723 MS.gene071319:intron 45.0%
CTGTATGTTCCAGAGACTCA+AGG - chr7.1:87914474-87914493 MS.gene071319:CDS 45.0%
CTTGTTCAGATTGGGCAGTT+AGG + chr7.1:87912527-87912546 None:intergenic 45.0%
GAAGCCAGCCATTTGAACAA+TGG + chr7.1:87913998-87914017 None:intergenic 45.0%
GAATATCGAGGTATATGCGG+TGG - chr7.1:87914315-87914334 MS.gene071319:intron 45.0%
GAGTTTATAGTCCACGGAAC+CGG + chr7.1:87914279-87914298 None:intergenic 45.0%
TATTGCAGAAGTTGCACCCT+CGG - chr7.1:87911686-87911705 MS.gene071319:intron 45.0%
TCACTCACAGGTGTGATATC+AGG - chr7.1:87910354-87910373 MS.gene071319:CDS 45.0%
TCGAGCCTTCTTCTTTAGCT+TGG + chr7.1:87912932-87912951 None:intergenic 45.0%
TCTTTACTTGAGCAGGTTCC+CGG - chr7.1:87912224-87912243 MS.gene071319:intron 45.0%
TGCTACGGCCAACATTATCA+AGG + chr7.1:87914160-87914179 None:intergenic 45.0%
TGTTAGCATGGCAATTGCTG+GGG - chr7.1:87911470-87911489 MS.gene071319:intron 45.0%
TTGGCGCTCTTGTTCAGATT+GGG + chr7.1:87912535-87912554 None:intergenic 45.0%
TTTCTTGTGTGTGGGATGGA+TGG - chr7.1:87911822-87911841 MS.gene071319:intron 45.0%
TTTGGCGCTCTTGTTCAGAT+TGG + chr7.1:87912536-87912555 None:intergenic 45.0%
! ATATGGAAGGAGAGAGCATG+GGG - chr7.1:87914522-87914541 MS.gene071319:CDS 45.0%
! ATGGATGGCTTGCAGTTATC+GGG - chr7.1:87914214-87914233 MS.gene071319:intron 45.0%
! ATTGACTTCCCTGCTCAAGA+AGG + chr7.1:87914569-87914588 None:intergenic 45.0%
! CAGGCTTTTCAGCAGTTTAC+AGG - chr7.1:87913943-87913962 MS.gene071319:intron 45.0%
! CTATGACTTGTCTCGCTTAG+AGG - chr7.1:87912488-87912507 MS.gene071319:intron 45.0%
! TGCTTTTCTTGTGTGTGGGA+TGG - chr7.1:87911818-87911837 MS.gene071319:intron 45.0%
!! GAGACTAGTTGGTGAGCTTA+TGG + chr7.1:87911342-87911361 None:intergenic 45.0%
!! GGTGTTGACTGCATAGCTAT+TGG + chr7.1:87910109-87910128 None:intergenic 45.0%
!! GGTTGGCTTAATGACGCATA+TGG - chr7.1:87911516-87911535 MS.gene071319:intron 45.0%
!! TTAGCCCTTTCTAGTTTGGC+AGG - chr7.1:87914123-87914142 MS.gene071319:intron 45.0%
!!! GGTATCGGTGGTCTTCTTTT+CGG - chr7.1:87910217-87910236 MS.gene071319:CDS 45.0%
!!! TAATATAGATTAAATATTTT+TGG - chr7.1:87912004-87912023 MS.gene071319:intron 5.0%
AAGAAAGCTAATGGCCAGCC+TGG + chr7.1:87913800-87913819 None:intergenic 50.0%
AATGTCCTCATGATCACCGG+TGG - chr7.1:87911735-87911754 MS.gene071319:intron 50.0%
ATTGTTGGTGCGGCATTTGG+TGG - chr7.1:87911495-87911514 MS.gene071319:intron 50.0%
CACACAGAACCTTCTTGAGC+AGG - chr7.1:87914557-87914576 MS.gene071319:CDS 50.0%
CTTCTGTCCCTCATAGTTGC+TGG - chr7.1:87914039-87914058 MS.gene071319:intron 50.0%
CTTTACTTGAGCAGGTTCCC+GGG - chr7.1:87912225-87912244 MS.gene071319:intron 50.0%
GAAGAGCCAACTGATTGGCA+TGG + chr7.1:87914020-87914039 None:intergenic 50.0%
GCAATTGCTGGGGCAATTGT+TGG - chr7.1:87911480-87911499 MS.gene071319:intron 50.0%
GCAATTGTTGGTGCGGCATT+TGG - chr7.1:87911492-87911511 MS.gene071319:intron 50.0%
GCATGGCAGCTACTGTATGT+TGG - chr7.1:87914337-87914356 MS.gene071319:intron 50.0%
GGTTTCTTCTCGCCAGGAAT+GGG - chr7.1:87914252-87914271 MS.gene071319:intron 50.0%
GTTGCTGGCATGAATGCCAT+CGG - chr7.1:87914054-87914073 MS.gene071319:intron 50.0%
GTTTCTTCTCGCCAGGAATG+GGG - chr7.1:87914253-87914272 MS.gene071319:intron 50.0%
TGAAAAGCCTGCACAGCCAA+TGG + chr7.1:87913934-87913953 None:intergenic 50.0%
TGGCTTCCATGCCAATCAGT+TGG - chr7.1:87914011-87914030 MS.gene071319:intron 50.0%
TGGTTTCTTCTCGCCAGGAA+TGG - chr7.1:87914251-87914270 MS.gene071319:intron 50.0%
! AGGACGTCTTCTCGTTGGTT+TGG - chr7.1:87911629-87911648 MS.gene071319:intron 50.0%
! ATTGCATCCATTGGCTGTGC+AGG - chr7.1:87913924-87913943 MS.gene071319:intron 50.0%
! CTTCTTTTCGGCTACGACAC+TGG - chr7.1:87910229-87910248 MS.gene071319:CDS 50.0%
! GGAAGAGCATGCAAACGAAC+TGG + chr7.1:87912295-87912314 None:intergenic 50.0%
! TGGCTTGCAGTTATCGGGTT+AGG - chr7.1:87914219-87914238 MS.gene071319:intron 50.0%
!! CGATGGATGCTTGGTGTTTC+AGG - chr7.1:87912254-87912273 MS.gene071319:intron 50.0%
!! CTGAACAAGAGCGCCAAAGA+AGG - chr7.1:87912538-87912557 MS.gene071319:intron 50.0%
!! CTTCTCGTTGGTTTGGGTGT+TGG - chr7.1:87911636-87911655 MS.gene071319:intron 50.0%
!! GGACGTCTTCTCGTTGGTTT+GGG - chr7.1:87911630-87911649 MS.gene071319:intron 50.0%
!!! CAGTTTTGAGTCGAGCTTCC+AGG - chr7.1:87913779-87913798 MS.gene071319:intron 50.0%
AAGCATCCATCGCCATGTCC+CGG + chr7.1:87912246-87912265 None:intergenic 55.0%
ACCAGACTGGCGTTCCTTGT+TGG - chr7.1:87912600-87912619 MS.gene071319:intron 55.0%
ACTGTCCACCGGTGATCATG+AGG + chr7.1:87911743-87911762 None:intergenic 55.0%
AGACTGGCGTTCCTTGTTGG+AGG - chr7.1:87912603-87912622 MS.gene071319:intron 55.0%
CAGTCAACACCGGGAAGTTC+AGG - chr7.1:87910118-87910137 MS.gene071319:CDS 55.0%
CCAGAAGTCCTCCTCCAACA+AGG + chr7.1:87912617-87912636 None:intergenic 55.0%
CCTTGTTGGAGGAGGACTTC+TGG - chr7.1:87912614-87912633 MS.gene071319:intron 55.0%
GTTGCACCCTCGGAAATCAG+AGG - chr7.1:87911696-87911715 MS.gene071319:intron 55.0%
TCCAACAAGGAACGCCAGTC+TGG + chr7.1:87912604-87912623 None:intergenic 55.0%
TCCTCCCCGAATCTCCAAGA+TGG - chr7.1:87912312-87912331 MS.gene071319:intron 55.0%
TCGAGGTATATGCGGTGGCA+TGG - chr7.1:87914320-87914339 MS.gene071319:intron 55.0%
TGCTGGGGCAATTGTTGGTG+CGG - chr7.1:87911485-87911504 MS.gene071319:intron 55.0%
TTTGAGTCGAGCTTCCAGGC+TGG - chr7.1:87913783-87913802 MS.gene071319:intron 55.0%
! TTGGTGCGGCATTTGGTGGT+TGG - chr7.1:87911499-87911518 MS.gene071319:intron 55.0%
ACCACCGATACCAGCGACAG+CGG + chr7.1:87910209-87910228 None:intergenic 60.0%
AGCATCCATCGCCATGTCCC+GGG + chr7.1:87912245-87912264 None:intergenic 60.0%
CTGGCGTTCCTTGTTGGAGG+AGG - chr7.1:87912606-87912625 MS.gene071319:intron 60.0%
GCCATCTTGGAGATTCGGGG+AGG + chr7.1:87912316-87912335 None:intergenic 60.0%
GGGACATGGCGATGGATGCT+TGG - chr7.1:87912245-87912264 MS.gene071319:intron 60.0%
TTGAGCAGGTTCCCGGGACA+TGG - chr7.1:87912231-87912250 MS.gene071319:intron 60.0%
AGGTTCCCGGGACATGGCGA+TGG - chr7.1:87912237-87912256 MS.gene071319:intron 65.0%
CTCGCCGCTGTCGCTGGTAT+CGG - chr7.1:87910202-87910221 MS.gene071319:CDS 65.0%
CTTCTCGCCAGGAATGGGGC+CGG - chr7.1:87914257-87914276 MS.gene071319:CDS 65.0%
GCGGCGAGGCCGAGAATGTA+AGG + chr7.1:87910190-87910209 None:intergenic 65.0%
CACGGAACCGGCCCCATTCC+TGG + chr7.1:87914267-87914286 None:intergenic 70.0%
CGATACCAGCGACAGCGGCG+AGG + chr7.1:87910204-87910223 None:intergenic 70.0%
! CAGGAATGGGGCCGGTTCCG+TGG - chr7.1:87914265-87914284 MS.gene071319:CDS 70.0%
! GCCGCTGTCGCTGGTATCGG+TGG - chr7.1:87910205-87910224 MS.gene071319:CDS 70.0%
! CTCGGCCTCGCCGCTGTCGC+TGG - chr7.1:87910196-87910215 MS.gene071319:CDS 80.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 87910097 87914593 87910097 ID=MS.gene071319
chr7.1 mRNA 87910097 87914593 87910097 ID=MS.gene071319.t1;Parent=MS.gene071319
chr7.1 exon 87914440 87914593 87914440 ID=MS.gene071319.t1.exon1;Parent=MS.gene071319.t1
chr7.1 CDS 87914440 87914593 87914440 ID=cds.MS.gene071319.t1;Parent=MS.gene071319.t1
chr7.1 exon 87914256 87914326 87914256 ID=MS.gene071319.t1.exon2;Parent=MS.gene071319.t1
chr7.1 CDS 87914256 87914326 87914256 ID=cds.MS.gene071319.t1;Parent=MS.gene071319.t1
chr7.1 exon 87912893 87913228 87912893 ID=MS.gene071319.t1.exon3;Parent=MS.gene071319.t1
chr7.1 CDS 87912893 87913228 87912893 ID=cds.MS.gene071319.t1;Parent=MS.gene071319.t1
chr7.1 exon 87912344 87912451 87912344 ID=MS.gene071319.t1.exon4;Parent=MS.gene071319.t1
chr7.1 CDS 87912344 87912451 87912344 ID=cds.MS.gene071319.t1;Parent=MS.gene071319.t1
chr7.1 exon 87912055 87912240 87912055 ID=MS.gene071319.t1.exon5;Parent=MS.gene071319.t1
chr7.1 CDS 87912055 87912240 87912055 ID=cds.MS.gene071319.t1;Parent=MS.gene071319.t1
chr7.1 exon 87910097 87910744 87910097 ID=MS.gene071319.t1.exon6;Parent=MS.gene071319.t1
chr7.1 CDS 87910097 87910744 87910097 ID=cds.MS.gene071319.t1;Parent=MS.gene071319.t1
Gene Sequence

>MS.gene071319

ATGACGGTTCCAATAGCTATGCAGTCAACACCGGGAAGTTCAGGTTACTTAGATATGCATCCTGATCGTAAGATGTCTTTCTTTAAGAATCCTTACATTCTCGGCCTCGCCGCTGTCGCTGGTATCGGTGGTCTTCTTTTCGGCTACGACACTGGTTAGTTGCTTAATTCACTCACTATTATATTATTCATCTCATTTTATTATTTCATCCTAATAAATAATTCAAACATAACTTCAATTCTTCTTCTTCTTCTTCTTCACTCACAGGTGTGATATCAGGAGCTCTTTTGTACATTAAAGATGATTTTCCTCAAGTTAGAAACAGTAATTTTCTGCAGGTACCTACCTCCATACTATACTATGCTCTAACTAACTTCACCTTATTATTATTATGTATAAGCCATCGGCCTTTTTTTTTATTTTAAATTATCTACTCACATAACTTATGAAAATAGCTTATGACATTGTTCATAACTTGTTTTCTGCATATTTTCATTACTTCTTTCTTATCAAAACACCTAATACCCTATACAACAACCAATTTAACTTACTATTATCTTATATACTACAAATACCTTATACATAATAACTACTTCTTCTATAAGCTGCAAATAAGTTGTTTATCCAAACAGTGAAGTGATAATTACAAAATCAAACTCTTTTCATGTACTATCTATGCTATAAGCTGTTTTATTTATAAGCTACCTTTGAAAACTTATGAAAATAAGATAAAACAACTTAACTTATGGACGGACGGACATGTTATAAGCTTTCAGAAATGGTCTTAAACGTACGTGCTTAGTAGACAAGCTTAAATAAACCAATCCATAAACAACTTTTAATTAATAACCTATAACACAAACACCAATCATATAATTGCTTATGTACAAGTTATTTACGTAAAAAAAATAAAGTCAAACTATTTTCATATAAGTTACTATAACTTGTTTTTATAAGCTATTATGGGCCTGTTGAATTCACTTATTATTTGAGCTTATCTACTATCATAAGTTTTGTTAAACTGTTTAGACAAATTTATGAAAACAACTTATGACATTCTTCATAACCTGTTTTCACCTTAATTTCATAACTTCTTTAAGATAGCTTATATGAAAACAATTTAACTTTATTTTATCTTCTGTTATACAAATAACTTATACATTGTGCGGAAATAAGCTGTTTATTCAAACAGGGCCTAGGTAGAGCTTATGCAAATAAGTGTTAAAAGAGTTTGTGGACATTCCATAAGCTCACCAACTAGTCTCACAAGTACTTATGGAAGTAGATAGGCTCCAATAAGCTAATATAAATAGCCTCTACATCATTCCTTTTTCTGACACTCACTTTTGTGTCTCTCAATTTCAGGAAACAATTGTTAGCATGGCAATTGCTGGGGCAATTGTTGGTGCGGCATTTGGTGGTTGGCTTAATGACGCATATGGAAGAAAGAAGGCCACACTCTTAGCTGATGTTATCTTTATTCTCGGAGCAATTCTCATGGCTGCTGCACCTGATCCTTATGTTCTCATAGTAGGACGTCTTCTCGTTGGTTTGGGTGTTGGCATAGCTTCTGTTACTGCTCCTGTCTATATTGCAGAAGTTGCACCCTCGGAAATCAGAGGTTCATTGGTCAGCACTAATGTCCTCATGATCACCGGTGGACAGTTCGTTTCCTATCTTGTTAACCTTGTTTTCACCCAGGTTAGTGTGTTAGTCTTTCATGCTTTTCTTGTGTGTGGGATGGATGGATATGTGTGCTTTTTCTATCAACGTGTTTAATTTTGGATTTTGTTGCTTTTTGGTTTTGTTTCACTGATTGCATTTCATATTCTTAGGGGTGGTTTACTTCTGCTCTTTCTACTTCTACCGATAAAATAAAACATTAGATAAGACATTATGAAAGTTTTTAATATAGATTAAATATTTTTGGAAATTTCTGAAAAATTTCAAAACATTGTGTTTGGTTTGGTGTATCAAGAAATGCATTCTCTCTAGTTAGCTTCCATCTTCTCTATATCACAATTTTAAAATAAAAAAAAAAATCAATAACCAAATGTCTTTTGATTTCAACCATCCACACACAAAGTAAAAGTTGGAAATTGAAAATGTTGTTAAAAAGTAAACGGGTCTTTACTTGAGCAGGTTCCCGGGACATGGCGATGGATGCTTGGTGTTTCAGGTGTGCCTGCACTTATCCAGTTCGTTTGCATGCTCTTCCTCCCCGAATCTCCAAGATGGCTATTTATAAAGGTACAAATTTGATCTTCTCAACAATTGTGTCCCAGATGTACATGTACTGCAGAAGTAACTTGTTTATAATGCCATTTTAAAATTTTACTATCTTGGTGTGCAGAATAGGAAAAATGAAGCGGTCGATGTAATTTCTAAGATCTATGACTTGTCTCGCTTAGAGGATGAAATTGATTTCCTAACTGCCCAATCTGAACAAGAGCGCCAAAGAAGGAGTACTATCAAATTCTGGCATGTTTTCAGATCAAAAGAAACCAGACTGGCGTTCCTTGTTGGAGGAGGACTTCTGGTAATAAAATAAAATGTTTACAAAGAAACTCTTTTTGCAGAACATAACTTGATCGCAATTAAAGAATCTTTATGAATGCTCTTTGCTGTCAATAGGCTAACTAGAATATTCTATTTTATTAAAACATATGTATATATGTGAGTCATGCTAACTAGAATATTCTACTTTATTAAAACATATGTATATATGTGAGTCATTGCAGAGTCCGTATTCTATATTCCACTGGTGAGAAATCATAGGCTTGTTCTAGACATGTTGGATTGCTCTAAAACAGAAGAGTACAATTGAAATCACCAAGCTAAAGAAGAAGGCTCGATTACATCATTATAAATGATTGCATATATAATAAGCTCTATAAAATATACTTTAGGGTCTGTTTTATGTTATTGAGAATTTAGCACTGAGTCTAATGGTTATAGCTTTAAAATTGAAACCACAATGCTGGAAATATTTCATTTTAGGAGCTGAAATTGTTTTGATAGAAAATGTAGCATTTATTATGAAAAATAAGATATATTGAAGAAACAAGTTTCATTCGAAGGCTAATATAATATATGTTACTCCTATGTATATTTATTACCGTGCAGTTGTAAGACCTTGAATGCTATACGAGACAAAATGTTGGAAAACAATAAGAAAGAATATTCATAGTCATAAAGATGAGAATGTTAAAATTCATAAGTGATCATACAAGGAAGATTAAGATTAGTAATAAAACTATTGAAGAGAAACTAAGGGTAACTCTGTTTAAAGAATAAGATGGTAGAATATCATTTTAAGTGGTTTGAATATTTCCGGAAAAGACTCGGAGAAGTATCAGTGAAGAGAATCGATCAGATGGAGTATAGTTTAATAGGTAGAAGGAGACCAAGAAAAGTTATTGGTCAAATCATTAAGCGAGATTTATAGATAAATGGTTTATCTTTAAAGTTGATGAATAGTAGGACTTTATGACACAATTAGATTCATGTAAGCGACTTCACCTTGTGAGATAAGACTTGGTTGTTATTGTTTGTTTCTCAATACTTTCGTTGATCTTTGACTTGGTGAAAGTTTTCACTACTTTTCATTTATTTTCATTTTGTCCTGTATTAAATAAACACCGTTAAATTAAAAATGTCATATATGTTTATATTTTAATTTCAGTTTTGAGTCGAGCTTCCAGGCTGGCCATTAGCTTTCTTGTTTGACCATACTTTATTTGTTACTGGCAGTTGAATGCATGTTGGAATTAGGCTCTTTATTTGAATATAAATGACTTTGGTTTATGTATGTGAAATGCATTCTTATTGCATCCATTGGCTGTGCAGGCTTTTCAGCAGTTTACAGGTATAAACACGGTTATGTACTACAGTCCAACCATTGTTCAAATGGCTGGCTTCCATGCCAATCAGTTGGCTCTTCTTCTGTCCCTCATAGTTGCTGGCATGAATGCCATCGGAACAATTCTTGGCATTTACCTTATTGACAACACAGGGCGGAAAAAATTAGCCCTTTCTAGTTTGGCAGGAGTAATCGCGTCCTTGATAATGTTGGCCGTAGCATTTTACAAACAGTCATCGTCTACAAATGAAGTGTATGGATGGCTTGCAGTTATCGGGTTAGGCCTTTATATTGGTTTCTTCTCGCCAGGAATGGGGCCGGTTCCGTGGACTATAAACTCAGAGATATATCCTGAAGAATATCGAGGTATATGCGGTGGCATGGCAGCTACTGTATGTTGGATTTCAAATTTGATCGTGTCCGAGAGCTTTCTTTCGATTGCTGATGCTATCGGGATTGCTTCAACTTTCTTGATTATTGCTGTTATAGCTGTGGTGGCATTTCTCTTTGTACTTCTGTATGTTCCAGAGACTCAAGGATTGACGTTTGATGAAGTGGAGTTAATATGGAAGGAGAGAGCATGGGGCAAGAATCCAAACACACAGAACCTTCTTGAGCAGGGAAGTCAATCATAA
Protein sequence

>MS.gene071319.t1

MTVPIAMQSTPGSSGYLDMHPDRKMSFFKNPYILGLAAVAGIGGLLFGYDTGVISGALLYIKDDFPQVRNSNFLQETIVSMAIAGAIVGAAFGGWLNDAYGRKKATLLADVIFILGAILMAAAPDPYVLIVGRLLVGLGVGIASVTAPVYIAEVAPSEIRGSLVSTNVLMITGGQFVSYLVNLVFTQVPGTWRWMLGVSGVPALIQFVCMLFLPESPRWLFIKNRKNEAVDVISKIYDLSRLEDEIDFLTAQSEQERQRRSTIKFWHVFRSKETRLAFLVGGGLLAFQQFTGINTVMYYSPTIVQMAGFHANQLALLLSLIVAGMNAIGTILGIYLIDNTGRKKLALSSLAGVIASLIMLAVAFYKQSSSTNEVYGWLAVIGLGLYIGFFSPGMGPVPWTINSEIYPEEYRGICGGMAATVCWISNLIVSESFLSIADAIGIASTFLIIAVIAVVAFLFVLLYVPETQGLTFDEVELIWKERAWGKNPNTQNLLEQGSQS