Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033323.t1 | RHN63421.1 | 95.3 | 514 | 24 | 0 | 1 | 514 | 1 | 514 | 2.80E-220 | 774.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033323.t1 | Q6NNP0 | 59.4 | 507 | 206 | 0 | 8 | 514 | 3 | 509 | 5.6e-169 | 595.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033323.t1 | A0A396IF41 | 95.3 | 514 | 24 | 0 | 1 | 514 | 1 | 514 | 2.0e-220 | 774.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033323.t1 | MTR_4g104380 | 98.638 | 514 | 7 | 0 | 1 | 514 | 1 | 514 | 0.0 | 1041 |
| MS.gene033323.t1 | MTR_3g075400 | 74.606 | 508 | 129 | 0 | 7 | 514 | 2 | 509 | 0.0 | 787 |
| MS.gene033323.t1 | MTR_4g007500 | 78.643 | 398 | 32 | 4 | 30 | 427 | 20 | 364 | 0.0 | 610 |
| MS.gene033323.t1 | MTR_6g027280 | 52.353 | 170 | 35 | 5 | 48 | 199 | 95 | 236 | 8.00e-36 | 134 |
| MS.gene033323.t1 | MTR_8g092620 | 27.397 | 292 | 200 | 6 | 226 | 513 | 14 | 297 | 1.81e-31 | 123 |
| MS.gene033323.t1 | MTR_8g092620 | 28.571 | 273 | 183 | 6 | 226 | 494 | 21 | 285 | 1.54e-29 | 119 |
| MS.gene033323.t1 | MTR_4g119620 | 29.804 | 255 | 167 | 6 | 228 | 475 | 76 | 325 | 1.56e-29 | 119 |
| MS.gene033323.t1 | MTR_4g119620 | 26.792 | 265 | 175 | 7 | 263 | 513 | 18 | 277 | 3.24e-19 | 89.0 |
| MS.gene033323.t1 | MTR_7g086360 | 27.206 | 272 | 193 | 2 | 226 | 492 | 51 | 322 | 1.28e-27 | 114 |
| MS.gene033323.t1 | MTR_7g086360 | 27.143 | 210 | 138 | 6 | 310 | 513 | 51 | 251 | 7.16e-15 | 76.3 |
| MS.gene033323.t1 | MTR_4g102520 | 25.962 | 312 | 206 | 8 | 218 | 513 | 282 | 584 | 2.16e-24 | 107 |
| MS.gene033323.t1 | MTR_4g102520 | 33.019 | 106 | 65 | 3 | 289 | 392 | 273 | 374 | 7.81e-12 | 68.2 |
| MS.gene033323.t1 | MTR_1g072140 | 26.073 | 303 | 214 | 6 | 219 | 513 | 12 | 312 | 3.55e-22 | 97.8 |
| MS.gene033323.t1 | MTR_8g092620 | 28.837 | 215 | 143 | 5 | 226 | 436 | 14 | 222 | 5.63e-22 | 95.1 |
| MS.gene033323.t1 | MTR_8g106790 | 26.623 | 308 | 177 | 9 | 241 | 513 | 27 | 320 | 1.15e-21 | 96.3 |
| MS.gene033323.t1 | MTR_8g106790 | 25.455 | 275 | 173 | 8 | 225 | 475 | 58 | 324 | 3.43e-16 | 80.1 |
| MS.gene033323.t1 | MTR_8g106790 | 27.027 | 222 | 140 | 7 | 306 | 513 | 7 | 220 | 1.87e-13 | 72.0 |
| MS.gene033323.t1 | MTR_2g012630 | 26.906 | 223 | 157 | 3 | 245 | 466 | 31 | 248 | 1.79e-20 | 95.9 |
| MS.gene033323.t1 | MTR_2g012630 | 26.974 | 152 | 109 | 2 | 228 | 378 | 98 | 248 | 3.34e-15 | 79.3 |
| MS.gene033323.t1 | MTR_2g012630 | 24.123 | 228 | 163 | 4 | 285 | 509 | 29 | 249 | 4.27e-15 | 79.0 |
| MS.gene033323.t1 | MTR_2g012630 | 26.906 | 223 | 157 | 3 | 245 | 466 | 31 | 248 | 1.95e-20 | 95.9 |
| MS.gene033323.t1 | MTR_2g012630 | 26.974 | 152 | 109 | 2 | 228 | 378 | 98 | 248 | 3.13e-15 | 79.3 |
| MS.gene033323.t1 | MTR_2g012630 | 24.123 | 228 | 163 | 4 | 285 | 509 | 29 | 249 | 5.20e-15 | 78.6 |
| MS.gene033323.t1 | MTR_6g004040 | 27.049 | 244 | 168 | 5 | 224 | 462 | 7 | 245 | 2.21e-20 | 95.5 |
| MS.gene033323.t1 | MTR_6g004040 | 25.339 | 221 | 155 | 4 | 284 | 501 | 29 | 242 | 1.18e-16 | 83.6 |
| MS.gene033323.t1 | MTR_6g004040 | 24.103 | 195 | 146 | 2 | 221 | 414 | 50 | 243 | 1.42e-12 | 70.9 |
| MS.gene033323.t1 | MTR_6g004040 | 21.154 | 208 | 153 | 4 | 310 | 513 | 12 | 212 | 2.64e-11 | 66.6 |
| MS.gene033323.t1 | MTR_1g072740 | 27.444 | 266 | 167 | 8 | 218 | 468 | 281 | 535 | 5.33e-18 | 87.4 |
| MS.gene033323.t1 | MTR_1g072740 | 33.019 | 106 | 65 | 3 | 289 | 392 | 272 | 373 | 5.89e-12 | 68.6 |
| MS.gene033323.t1 | MTR_4g105700 | 26.394 | 269 | 175 | 8 | 263 | 514 | 350 | 612 | 9.48e-18 | 87.4 |
| MS.gene033323.t1 | MTR_4g105700 | 31.351 | 185 | 116 | 5 | 253 | 427 | 41 | 224 | 3.18e-16 | 82.4 |
| MS.gene033323.t1 | MTR_8g104010 | 25.322 | 233 | 163 | 4 | 283 | 513 | 600 | 823 | 6.40e-17 | 84.7 |
| MS.gene033323.t1 | MTR_8g104010 | 26.119 | 268 | 163 | 13 | 226 | 471 | 669 | 923 | 6.54e-13 | 72.0 |
| MS.gene033323.t1 | MTR_8g104010 | 25.322 | 233 | 163 | 4 | 283 | 513 | 517 | 740 | 6.94e-17 | 84.3 |
| MS.gene033323.t1 | MTR_8g104010 | 26.119 | 268 | 163 | 13 | 226 | 471 | 586 | 840 | 5.80e-13 | 72.0 |
| MS.gene033323.t1 | MTR_8g104010 | 25.322 | 233 | 163 | 4 | 283 | 513 | 880 | 1103 | 1.11e-16 | 84.0 |
| MS.gene033323.t1 | MTR_8g104010 | 26.119 | 268 | 163 | 13 | 226 | 471 | 949 | 1203 | 6.93e-13 | 72.0 |
| MS.gene033323.t1 | MTR_1g097140 | 24.912 | 285 | 199 | 7 | 225 | 504 | 118 | 392 | 1.36e-16 | 82.4 |
| MS.gene033323.t1 | MTR_1g097140 | 24.306 | 288 | 155 | 8 | 224 | 498 | 74 | 311 | 5.68e-11 | 64.7 |
| MS.gene033323.t1 | MTR_3g045130 | 22.892 | 249 | 180 | 3 | 267 | 514 | 274 | 511 | 4.12e-16 | 81.3 |
| MS.gene033323.t1 | MTR_3g045130 | 23.320 | 253 | 184 | 5 | 232 | 482 | 277 | 521 | 4.78e-12 | 68.6 |
| MS.gene033323.t1 | MTR_2g436510 | 22.222 | 261 | 185 | 7 | 224 | 477 | 163 | 412 | 5.21e-16 | 80.9 |
| MS.gene033323.t1 | MTR_8g038550 | 22.635 | 296 | 181 | 5 | 221 | 514 | 216 | 465 | 2.00e-15 | 79.7 |
| MS.gene033323.t1 | MTR_3g106080 | 27.815 | 302 | 188 | 11 | 218 | 513 | 337 | 614 | 5.77e-15 | 78.2 |
| MS.gene033323.t1 | MTR_3g106080 | 21.951 | 205 | 158 | 2 | 226 | 429 | 415 | 618 | 1.36e-11 | 67.4 |
| MS.gene033323.t1 | MTR_1g054300 | 27.660 | 141 | 101 | 1 | 202 | 342 | 342 | 481 | 1.31e-14 | 76.6 |
| MS.gene033323.t1 | MTR_1g054300 | 25.630 | 238 | 146 | 7 | 245 | 471 | 264 | 481 | 1.33e-11 | 67.0 |
| MS.gene033323.t1 | MTR_4g095058 | 23.000 | 300 | 172 | 6 | 223 | 512 | 321 | 571 | 2.10e-14 | 76.3 |
| MS.gene033323.t1 | MTR_4g095058 | 23.000 | 300 | 172 | 6 | 223 | 512 | 323 | 573 | 2.26e-14 | 76.3 |
| MS.gene033323.t1 | MTR_2g019400 | 27.011 | 174 | 114 | 3 | 316 | 489 | 2 | 162 | 7.15e-14 | 72.4 |
| MS.gene033323.t1 | MTR_3g449990 | 24.522 | 314 | 209 | 11 | 215 | 513 | 255 | 555 | 1.22e-13 | 73.9 |
| MS.gene033323.t1 | MTR_5g016350 | 23.381 | 278 | 195 | 6 | 245 | 512 | 245 | 514 | 3.11e-13 | 72.4 |
| MS.gene033323.t1 | MTR_5g016350 | 23.381 | 278 | 195 | 6 | 245 | 512 | 309 | 578 | 3.75e-13 | 72.4 |
| MS.gene033323.t1 | MTR_5g016370 | 23.022 | 278 | 196 | 7 | 245 | 512 | 321 | 590 | 8.26e-13 | 71.2 |
| MS.gene033323.t1 | MTR_2g016690 | 23.693 | 287 | 193 | 8 | 245 | 514 | 23 | 300 | 1.91e-12 | 68.9 |
| MS.gene033323.t1 | MTR_1g034785 | 23.113 | 212 | 141 | 3 | 240 | 429 | 86 | 297 | 2.59e-12 | 69.3 |
| MS.gene033323.t1 | MTR_3g052220 | 22.422 | 223 | 144 | 7 | 280 | 482 | 222 | 435 | 8.03e-12 | 67.8 |
| MS.gene033323.t1 | MTR_3g052220 | 27.108 | 166 | 107 | 4 | 328 | 483 | 227 | 388 | 1.07e-11 | 67.4 |
| MS.gene033323.t1 | MTR_4g125710 | 24.812 | 266 | 169 | 8 | 245 | 489 | 33 | 288 | 8.82e-12 | 66.6 |
| MS.gene033323.t1 | MTR_2g029940 | 23.377 | 231 | 162 | 5 | 245 | 473 | 225 | 442 | 9.00e-12 | 67.8 |
| MS.gene033323.t1 | MTR_7g076230 | 25.243 | 206 | 146 | 4 | 281 | 483 | 378 | 578 | 1.05e-11 | 68.2 |
| MS.gene033323.t1 | MTR_6g005220 | 23.741 | 278 | 172 | 11 | 274 | 513 | 110 | 385 | 1.22e-11 | 67.4 |
| MS.gene033323.t1 | MTR_2g034500 | 24.188 | 277 | 161 | 9 | 225 | 471 | 236 | 493 | 1.71e-11 | 67.8 |
| MS.gene033323.t1 | MTR_4g071130 | 26.394 | 269 | 166 | 12 | 225 | 485 | 46 | 290 | 2.54e-11 | 67.0 |
| MS.gene033323.t1 | MTR_1g044720 | 25.000 | 204 | 147 | 4 | 232 | 431 | 224 | 425 | 4.58e-11 | 65.5 |
| MS.gene033323.t1 | MTR_1g069345 | 24.127 | 315 | 207 | 14 | 217 | 513 | 203 | 503 | 6.36e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033323.t1 | AT5G50230 | 71.203 | 507 | 146 | 0 | 8 | 514 | 3 | 509 | 0.0 | 783 |
| MS.gene033323.t1 | AT5G64730 | 26.490 | 302 | 216 | 4 | 213 | 513 | 1 | 297 | 3.88e-30 | 120 |
| MS.gene033323.t1 | AT3G49660 | 28.682 | 258 | 168 | 5 | 226 | 475 | 67 | 316 | 1.26e-29 | 119 |
| MS.gene033323.t1 | AT3G49660 | 25.581 | 301 | 205 | 6 | 226 | 514 | 20 | 313 | 1.07e-27 | 113 |
| MS.gene033323.t1 | AT2G43770 | 26.838 | 272 | 194 | 2 | 226 | 492 | 49 | 320 | 1.71e-28 | 116 |
| MS.gene033323.t1 | AT2G43770 | 26.923 | 208 | 141 | 5 | 310 | 513 | 49 | 249 | 3.88e-15 | 77.4 |
| MS.gene033323.t1 | AT1G48630 | 26.073 | 303 | 186 | 8 | 241 | 513 | 27 | 321 | 8.26e-22 | 96.7 |
| MS.gene033323.t1 | AT1G48630 | 25.725 | 276 | 172 | 8 | 225 | 475 | 58 | 325 | 4.82e-17 | 82.8 |
| MS.gene033323.t1 | AT1G48630 | 25.455 | 220 | 146 | 7 | 306 | 513 | 7 | 220 | 1.05e-12 | 69.7 |
| MS.gene033323.t1 | AT3G18130 | 26.403 | 303 | 185 | 8 | 241 | 513 | 27 | 321 | 1.40e-21 | 96.3 |
| MS.gene033323.t1 | AT3G18130 | 25.725 | 276 | 172 | 8 | 225 | 475 | 58 | 325 | 7.74e-17 | 82.0 |
| MS.gene033323.t1 | AT3G18130 | 25.000 | 220 | 147 | 7 | 306 | 513 | 7 | 220 | 1.17e-11 | 66.6 |
| MS.gene033323.t1 | AT1G10580 | 24.038 | 312 | 212 | 8 | 218 | 513 | 270 | 572 | 2.33e-21 | 97.8 |
| MS.gene033323.t1 | AT3G16650 | 25.191 | 262 | 175 | 8 | 224 | 477 | 163 | 411 | 9.15e-21 | 95.5 |
| MS.gene033323.t1 | AT5G23430 | 28.111 | 217 | 150 | 4 | 224 | 435 | 7 | 222 | 1.14e-20 | 96.3 |
| MS.gene033323.t1 | AT5G23430 | 25.688 | 218 | 152 | 4 | 285 | 499 | 30 | 240 | 4.80e-16 | 82.0 |
| MS.gene033323.t1 | AT5G23430 | 24.103 | 195 | 146 | 2 | 221 | 414 | 50 | 243 | 9.43e-12 | 68.2 |
| MS.gene033323.t1 | AT5G23430 | 28.111 | 217 | 150 | 4 | 224 | 435 | 7 | 222 | 1.14e-20 | 96.3 |
| MS.gene033323.t1 | AT5G23430 | 25.688 | 218 | 152 | 4 | 285 | 499 | 30 | 240 | 4.80e-16 | 82.0 |
| MS.gene033323.t1 | AT5G23430 | 24.103 | 195 | 146 | 2 | 221 | 414 | 50 | 243 | 9.43e-12 | 68.2 |
| MS.gene033323.t1 | AT5G23430 | 28.111 | 217 | 150 | 4 | 224 | 435 | 7 | 222 | 1.16e-20 | 96.3 |
| MS.gene033323.t1 | AT5G23430 | 25.688 | 218 | 152 | 4 | 285 | 499 | 30 | 240 | 4.72e-16 | 82.0 |
| MS.gene033323.t1 | AT5G23430 | 24.103 | 195 | 146 | 2 | 221 | 414 | 50 | 243 | 9.52e-12 | 68.2 |
| MS.gene033323.t1 | AT1G11160 | 27.165 | 254 | 174 | 6 | 224 | 471 | 6 | 254 | 1.20e-20 | 96.7 |
| MS.gene033323.t1 | AT1G11160 | 23.789 | 227 | 167 | 3 | 284 | 509 | 28 | 249 | 1.59e-13 | 73.9 |
| MS.gene033323.t1 | AT1G11160 | 27.165 | 254 | 174 | 6 | 224 | 471 | 6 | 254 | 1.27e-20 | 96.3 |
| MS.gene033323.t1 | AT1G11160 | 23.789 | 227 | 167 | 3 | 284 | 509 | 28 | 249 | 1.69e-13 | 73.9 |
| MS.gene033323.t1 | AT1G11160 | 27.165 | 254 | 174 | 6 | 224 | 471 | 6 | 254 | 2.05e-20 | 95.9 |
| MS.gene033323.t1 | AT1G11160 | 23.789 | 227 | 167 | 3 | 284 | 509 | 28 | 249 | 2.44e-13 | 73.6 |
| MS.gene033323.t1 | AT1G18080 | 25.484 | 310 | 180 | 9 | 241 | 513 | 27 | 322 | 2.37e-20 | 92.4 |
| MS.gene033323.t1 | AT1G18080 | 28.440 | 218 | 143 | 6 | 306 | 513 | 7 | 221 | 4.99e-15 | 76.6 |
| MS.gene033323.t1 | AT1G18080 | 23.466 | 277 | 178 | 8 | 225 | 475 | 58 | 326 | 9.85e-14 | 72.8 |
| MS.gene033323.t1 | AT5G08390 | 28.571 | 217 | 149 | 4 | 224 | 435 | 7 | 222 | 2.87e-20 | 95.1 |
| MS.gene033323.t1 | AT5G08390 | 24.537 | 216 | 157 | 3 | 285 | 499 | 30 | 240 | 1.79e-15 | 80.1 |
| MS.gene033323.t1 | AT5G08390 | 22.564 | 195 | 149 | 2 | 221 | 414 | 50 | 243 | 5.00e-11 | 65.9 |
| MS.gene033323.t1 | AT5G08390 | 25.974 | 154 | 104 | 3 | 226 | 374 | 97 | 245 | 6.32e-11 | 65.5 |
| MS.gene033323.t1 | AT4G02730 | 25.704 | 284 | 202 | 6 | 214 | 490 | 23 | 304 | 2.75e-19 | 89.4 |
| MS.gene033323.t1 | AT4G02730 | 21.654 | 254 | 186 | 7 | 267 | 513 | 38 | 285 | 1.51e-13 | 72.4 |
| MS.gene033323.t1 | AT4G02730 | 25.907 | 193 | 135 | 4 | 219 | 405 | 117 | 307 | 9.47e-11 | 63.9 |
| MS.gene033323.t1 | AT4G15900 | 23.970 | 267 | 173 | 9 | 224 | 477 | 169 | 418 | 3.44e-19 | 90.9 |
| MS.gene033323.t1 | AT1G04510 | 26.247 | 381 | 235 | 13 | 58 | 431 | 87 | 428 | 5.48e-19 | 90.5 |
| MS.gene033323.t1 | AT1G04510 | 26.247 | 381 | 235 | 13 | 58 | 431 | 87 | 428 | 5.68e-19 | 90.5 |
| MS.gene033323.t1 | AT1G61210 | 26.378 | 254 | 176 | 6 | 224 | 472 | 6 | 253 | 5.11e-18 | 88.2 |
| MS.gene033323.t1 | AT1G61210 | 24.775 | 222 | 155 | 5 | 284 | 501 | 28 | 241 | 3.65e-13 | 72.8 |
| MS.gene033323.t1 | AT5G13480 | 23.469 | 294 | 179 | 4 | 221 | 513 | 167 | 415 | 5.85e-18 | 87.8 |
| MS.gene033323.t1 | AT5G13480 | 23.469 | 294 | 179 | 4 | 221 | 513 | 144 | 392 | 6.82e-18 | 87.4 |
| MS.gene033323.t1 | AT5G13480 | 23.469 | 294 | 179 | 4 | 221 | 513 | 144 | 392 | 8.79e-18 | 87.0 |
| MS.gene033323.t1 | AT5G13480 | 23.469 | 294 | 179 | 4 | 221 | 513 | 156 | 404 | 1.04e-17 | 86.7 |
| MS.gene033323.t1 | AT1G61210 | 26.872 | 227 | 160 | 4 | 224 | 445 | 6 | 231 | 1.08e-17 | 87.4 |
| MS.gene033323.t1 | AT1G61210 | 24.775 | 222 | 155 | 5 | 284 | 501 | 28 | 241 | 7.08e-13 | 72.0 |
| MS.gene033323.t1 | AT1G61210 | 25.157 | 159 | 116 | 3 | 226 | 383 | 96 | 252 | 1.24e-11 | 68.2 |
| MS.gene033323.t1 | AT1G61210 | 26.872 | 227 | 160 | 4 | 224 | 445 | 6 | 231 | 1.20e-17 | 87.0 |
| MS.gene033323.t1 | AT1G61210 | 24.775 | 222 | 155 | 5 | 284 | 501 | 28 | 241 | 7.59e-13 | 72.0 |
| MS.gene033323.t1 | AT1G61210 | 25.157 | 159 | 116 | 3 | 226 | 383 | 96 | 252 | 1.26e-11 | 68.2 |
| MS.gene033323.t1 | AT5G52820 | 22.849 | 337 | 214 | 11 | 219 | 513 | 97 | 429 | 1.46e-17 | 85.9 |
| MS.gene033323.t1 | AT5G52820 | 26.816 | 179 | 111 | 3 | 164 | 342 | 313 | 471 | 1.73e-14 | 76.3 |
| MS.gene033323.t1 | AT2G33340 | 23.758 | 463 | 294 | 16 | 58 | 507 | 87 | 503 | 7.13e-17 | 84.0 |
| MS.gene033323.t1 | AT2G33340 | 23.758 | 463 | 294 | 16 | 58 | 507 | 87 | 503 | 7.13e-17 | 84.0 |
| MS.gene033323.t1 | AT2G33340 | 24.011 | 379 | 243 | 11 | 58 | 430 | 87 | 426 | 1.10e-16 | 83.2 |
| MS.gene033323.t1 | AT5G16750 | 26.038 | 265 | 177 | 6 | 264 | 513 | 350 | 610 | 2.51e-16 | 82.8 |
| MS.gene033323.t1 | AT5G16750 | 26.512 | 215 | 149 | 5 | 254 | 461 | 42 | 254 | 4.68e-15 | 79.0 |
| MS.gene033323.t1 | AT5G16750 | 23.443 | 273 | 175 | 8 | 221 | 471 | 392 | 652 | 1.24e-11 | 67.8 |
| MS.gene033323.t1 | AT1G49040 | 27.306 | 271 | 170 | 12 | 241 | 498 | 866 | 1122 | 8.49e-16 | 81.3 |
| MS.gene033323.t1 | AT1G49040 | 23.616 | 271 | 179 | 8 | 254 | 513 | 836 | 1089 | 6.46e-14 | 75.5 |
| MS.gene033323.t1 | AT1G49040 | 24.862 | 181 | 125 | 6 | 233 | 409 | 944 | 1117 | 1.36e-12 | 71.2 |
| MS.gene033323.t1 | AT3G27640 | 24.911 | 281 | 169 | 8 | 274 | 513 | 130 | 409 | 1.31e-15 | 80.1 |
| MS.gene033323.t1 | AT3G27640 | 24.911 | 281 | 169 | 8 | 274 | 513 | 111 | 390 | 1.41e-15 | 79.7 |
| MS.gene033323.t1 | AT5G43920 | 25.806 | 310 | 208 | 11 | 218 | 513 | 212 | 513 | 1.79e-15 | 79.3 |
| MS.gene033323.t1 | AT1G11160 | 26.087 | 207 | 146 | 4 | 267 | 471 | 11 | 212 | 3.35e-15 | 79.3 |
| MS.gene033323.t1 | AT1G11160 | 28.387 | 155 | 107 | 3 | 226 | 378 | 54 | 206 | 3.99e-14 | 75.9 |
| MS.gene033323.t1 | AT1G11160 | 25.616 | 203 | 145 | 3 | 308 | 509 | 10 | 207 | 4.81e-13 | 72.4 |
| MS.gene033323.t1 | AT5G67320 | 23.264 | 288 | 162 | 5 | 226 | 503 | 361 | 599 | 1.01e-14 | 77.4 |
| MS.gene033323.t1 | AT3G18140 | 24.373 | 279 | 197 | 7 | 245 | 514 | 8 | 281 | 1.18e-14 | 75.1 |
| MS.gene033323.t1 | AT3G18140 | 25.000 | 184 | 122 | 5 | 235 | 406 | 124 | 303 | 8.29e-11 | 63.5 |
| MS.gene033323.t1 | AT4G03020 | 26.104 | 249 | 164 | 6 | 275 | 513 | 232 | 470 | 2.14e-14 | 75.9 |
| MS.gene033323.t1 | AT4G03020 | 26.104 | 249 | 164 | 6 | 275 | 513 | 232 | 470 | 2.14e-14 | 75.9 |
| MS.gene033323.t1 | AT4G03020 | 26.104 | 249 | 164 | 6 | 275 | 513 | 232 | 470 | 2.14e-14 | 75.9 |
| MS.gene033323.t1 | AT3G49180 | 24.645 | 211 | 142 | 3 | 243 | 436 | 91 | 301 | 8.25e-14 | 73.9 |
| MS.gene033323.t1 | AT5G08560 | 23.944 | 284 | 164 | 10 | 278 | 513 | 280 | 559 | 1.05e-13 | 73.9 |
| MS.gene033323.t1 | AT5G08560 | 23.944 | 284 | 164 | 10 | 278 | 513 | 280 | 559 | 1.05e-13 | 73.9 |
| MS.gene033323.t1 | AT5G08560 | 23.944 | 284 | 164 | 10 | 278 | 513 | 280 | 559 | 1.05e-13 | 73.9 |
| MS.gene033323.t1 | AT5G25150 | 26.367 | 311 | 177 | 11 | 218 | 513 | 340 | 613 | 1.30e-13 | 73.9 |
| MS.gene033323.t1 | AT5G25150 | 22.439 | 205 | 157 | 2 | 226 | 429 | 414 | 617 | 5.74e-11 | 65.5 |
| MS.gene033323.t1 | AT5G25150 | 26.367 | 311 | 177 | 11 | 218 | 513 | 340 | 613 | 1.65e-13 | 73.6 |
| MS.gene033323.t1 | AT5G25150 | 22.439 | 205 | 157 | 2 | 226 | 429 | 414 | 617 | 6.99e-11 | 65.5 |
| MS.gene033323.t1 | AT2G47410 | 28.249 | 177 | 109 | 3 | 225 | 383 | 49 | 225 | 1.82e-13 | 73.9 |
| MS.gene033323.t1 | AT2G47410 | 28.249 | 177 | 109 | 3 | 225 | 383 | 231 | 407 | 2.08e-13 | 73.9 |
| MS.gene033323.t1 | AT2G47410 | 28.249 | 177 | 109 | 3 | 225 | 383 | 230 | 406 | 2.17e-13 | 73.6 |
| MS.gene033323.t1 | AT2G21390 | 24.000 | 275 | 172 | 7 | 225 | 468 | 46 | 314 | 1.00e-12 | 71.6 |
| MS.gene033323.t1 | AT2G16405 | 23.308 | 266 | 182 | 7 | 268 | 513 | 212 | 475 | 1.01e-12 | 70.9 |
| MS.gene033323.t1 | AT2G47410 | 26.768 | 198 | 127 | 3 | 225 | 420 | 49 | 230 | 1.05e-12 | 71.6 |
| MS.gene033323.t1 | AT2G47410 | 26.768 | 198 | 127 | 3 | 225 | 420 | 49 | 230 | 1.05e-12 | 71.6 |
| MS.gene033323.t1 | AT2G47410 | 26.768 | 198 | 127 | 3 | 225 | 420 | 231 | 412 | 1.25e-12 | 71.2 |
| MS.gene033323.t1 | AT2G41500 | 23.140 | 242 | 174 | 6 | 277 | 514 | 303 | 536 | 1.29e-12 | 70.5 |
| MS.gene033323.t1 | AT2G41500 | 23.320 | 253 | 182 | 6 | 226 | 474 | 294 | 538 | 1.59e-12 | 70.5 |
| MS.gene033323.t1 | AT2G41500 | 23.140 | 242 | 174 | 6 | 277 | 514 | 303 | 536 | 1.29e-12 | 70.5 |
| MS.gene033323.t1 | AT2G41500 | 23.320 | 253 | 182 | 6 | 226 | 474 | 294 | 538 | 1.59e-12 | 70.5 |
| MS.gene033323.t1 | AT4G29830 | 23.810 | 294 | 195 | 7 | 227 | 498 | 11 | 297 | 1.59e-12 | 68.9 |
| MS.gene033323.t1 | AT2G22040 | 23.693 | 287 | 191 | 9 | 245 | 514 | 13 | 288 | 1.75e-12 | 68.9 |
| MS.gene033323.t1 | AT2G22040 | 25.134 | 187 | 125 | 4 | 235 | 409 | 130 | 313 | 1.97e-12 | 68.6 |
| MS.gene033323.t1 | AT1G71840 | 23.841 | 302 | 208 | 10 | 224 | 513 | 64 | 355 | 2.73e-12 | 68.9 |
| MS.gene033323.t1 | AT3G15610 | 23.810 | 273 | 195 | 7 | 245 | 513 | 34 | 297 | 3.27e-12 | 68.2 |
| MS.gene033323.t1 | AT1G73720 | 24.848 | 165 | 111 | 3 | 328 | 483 | 226 | 386 | 7.48e-12 | 68.2 |
| MS.gene033323.t1 | AT1G73720 | 22.791 | 215 | 152 | 6 | 280 | 482 | 221 | 433 | 1.32e-11 | 67.4 |
| MS.gene033323.t1 | AT2G26490 | 27.203 | 261 | 156 | 13 | 244 | 491 | 146 | 385 | 1.71e-11 | 66.6 |
| MS.gene033323.t1 | AT5G49430 | 26.570 | 207 | 128 | 4 | 225 | 429 | 240 | 424 | 3.71e-11 | 66.6 |
| MS.gene033323.t1 | AT5G49430 | 26.570 | 207 | 128 | 4 | 225 | 429 | 240 | 424 | 3.71e-11 | 66.6 |
| MS.gene033323.t1 | AT5G14530 | 22.727 | 308 | 206 | 10 | 200 | 495 | 8 | 295 | 4.30e-11 | 64.7 |
| MS.gene033323.t1 | AT1G62020 | 22.909 | 275 | 175 | 7 | 225 | 468 | 46 | 314 | 6.06e-11 | 65.9 |
| MS.gene033323.t1 | AT1G52730 | 22.993 | 274 | 196 | 8 | 245 | 513 | 34 | 297 | 7.42e-11 | 64.3 |
| MS.gene033323.t1 | AT1G52730 | 22.993 | 274 | 196 | 8 | 245 | 513 | 34 | 297 | 7.42e-11 | 64.3 |
Find 104 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGTATTATACCTCATTT+AGG | 0.277590 | 8.2:-20325628 | None:intergenic |
| TTAACAGAGTGGCTTCTAAT+TGG | 0.280252 | 8.2:+20327270 | MS.gene033323:CDS |
| TCCTTAAGTTCAAGTCTTAC+TGG | 0.289367 | 8.2:+20326738 | MS.gene033323:CDS |
| ACGACCGTACTATAAAAGTT+TGG | 0.316749 | 8.2:+20326955 | MS.gene033323:CDS |
| CTCTCAATTAAAGACGGATT+TGG | 0.319744 | 8.2:+20325451 | MS.gene033323:CDS |
| CGAGTCCGTCATACCCTTAC+TGG | 0.338442 | 8.2:+20326864 | MS.gene033323:CDS |
| TCAATCGCAACTTGTTCTTT+CGG | 0.343457 | 8.2:-20324345 | None:intergenic |
| TTGTTTCAATCTGGTCATAA+TGG | 0.359886 | 8.2:+20327477 | MS.gene033323:CDS |
| CTTCTGTTCTCTGTTGTAGC+TGG | 0.366870 | 8.2:+20327411 | MS.gene033323:CDS |
| GCAAAGAGCATTGCAGTTGC+TGG | 0.371762 | 8.2:-20327018 | None:intergenic |
| ACAACAACAATGGTGAAAAC+TGG | 0.379287 | 8.2:+20324318 | None:intergenic |
| TCGATGGTAATCTTCGGTTA+TGG | 0.380769 | 8.2:+20327078 | MS.gene033323:CDS |
| ATCGACATGTCCAGAAAATA+TGG | 0.387589 | 8.2:-20327060 | None:intergenic |
| TCAATATCACTTTCTCGAAA+TGG | 0.389236 | 8.2:+20327158 | MS.gene033323:CDS |
| CGACCGTACTATAAAAGTTT+GGG | 0.390463 | 8.2:+20326956 | MS.gene033323:CDS |
| TGGCTGCCTTGGCTCAGTAT+TGG | 0.392787 | 8.2:+20326758 | MS.gene033323:CDS |
| AATTCTAGTAGATTGATTAC+TGG | 0.396540 | 8.2:+20326672 | MS.gene033323:CDS |
| GAAAGAGAAAGCAGAGAACT+TGG | 0.396574 | 8.2:+20324975 | MS.gene033323:CDS |
| TCAAGTCTTACTGGCTGCCT+TGG | 0.397402 | 8.2:+20326747 | MS.gene033323:CDS |
| TTCTAGACCCATCGTTTCTC+AGG | 0.404660 | 8.2:+20324449 | MS.gene033323:CDS |
| AGAATTGTACTCGAACAATA+AGG | 0.407571 | 8.2:-20326655 | None:intergenic |
| CTGATGGATCTGTGCATATA+TGG | 0.413468 | 8.2:+20327342 | MS.gene033323:CDS |
| GGAATGGAATTGTTTCAATC+TGG | 0.416661 | 8.2:+20327468 | MS.gene033323:CDS |
| CGATGGTAATCTTCGGTTAT+GGG | 0.416788 | 8.2:+20327079 | MS.gene033323:CDS |
| TTCAGAACTGAAAACACAAC+TGG | 0.427251 | 8.2:+20325514 | MS.gene033323:CDS |
| AAGACATGGTTCAGCGGCTA+AGG | 0.439770 | 8.2:+20326490 | MS.gene033323:CDS |
| ATTCCTGTCAGCTGAAGCTA+GGG | 0.443091 | 8.2:-20327450 | None:intergenic |
| CTTTATCCGTGTGTCCAGTA+AGG | 0.447371 | 8.2:-20326878 | None:intergenic |
| TTTGTTTGATGTGCGATCTC+TGG | 0.451133 | 8.2:+20327220 | MS.gene033323:CDS |
| GCCAGTAAGACTTGAACTTA+AGG | 0.454568 | 8.2:-20326739 | None:intergenic |
| TCCCTTCCAATTGCAAATAC+AGG | 0.460830 | 8.2:+20326604 | MS.gene033323:CDS |
| GTTGCCGCTGGGTCTGCTGA+TGG | 0.465398 | 8.2:+20327326 | MS.gene033323:CDS |
| CATTCCTGTCAGCTGAAGCT+AGG | 0.467857 | 8.2:-20327451 | None:intergenic |
| AATAACAGATCGATTATCAT+TGG | 0.473031 | 8.2:-20326793 | None:intergenic |
| GCTCTTTGCTTCAGCACAGA+TGG | 0.474209 | 8.2:+20327032 | MS.gene033323:CDS |
| CTAGAAAGTGCGAGAAAAGC+AGG | 0.474966 | 8.2:-20324432 | None:intergenic |
| GACAACAATCATGTTGCCGC+TGG | 0.477287 | 8.2:+20327314 | MS.gene033323:CDS |
| ATTTAGCCTGTATTTGCAAT+TGG | 0.481713 | 8.2:-20326610 | None:intergenic |
| GAAAGCAGAGAACTTGGAAG+TGG | 0.488324 | 8.2:+20324981 | MS.gene033323:CDS |
| AACCCCTAGCTTCAGCTGAC+AGG | 0.489230 | 8.2:+20327447 | MS.gene033323:CDS |
| ATTCTAGTAGATTGATTACT+GGG | 0.491572 | 8.2:+20326673 | MS.gene033323:CDS |
| GCGGCAACATGATTGTTGTC+TGG | 0.492362 | 8.2:-20327311 | None:intergenic |
| TGTTGTAGCTGGAGTGGAAT+GGG | 0.499332 | 8.2:+20327422 | MS.gene033323:CDS |
| AGCCTGTATTTGCAATTGGA+AGG | 0.502314 | 8.2:-20326606 | None:intergenic |
| AAACGCCATCTTCTCGAAGA+AGG | 0.507490 | 8.2:+20324399 | MS.gene033323:CDS |
| GCCTGTATTTGCAATTGGAA+GGG | 0.520159 | 8.2:-20326605 | None:intergenic |
| CATATATGGTCAATATCTAA+AGG | 0.520412 | 8.2:+20327356 | MS.gene033323:CDS |
| GAGCGCCTTCTTCGAGAAGA+TGG | 0.521377 | 8.2:-20324404 | None:intergenic |
| GACATGTCGATGGTAATCTT+CGG | 0.525301 | 8.2:+20327072 | MS.gene033323:CDS |
| AAAGTTTGGGACTTGATGAA+AGG | 0.527945 | 8.2:+20326969 | MS.gene033323:CDS |
| CAAAGAGCATTGCAGTTGCT+GGG | 0.531625 | 8.2:-20327017 | None:intergenic |
| TACTTCCACAACAAGTTGCT+CGG | 0.532958 | 8.2:-20325040 | None:intergenic |
| GTGCAAATTATCCCTTCCAC+TGG | 0.536187 | 8.2:-20327195 | None:intergenic |
| GTTCTCTGTTGTAGCTGGAG+TGG | 0.537003 | 8.2:+20327416 | MS.gene033323:CDS |
| AAAGTGTGGGATACAAATAC+AGG | 0.539323 | 8.2:+20326714 | MS.gene033323:CDS |
| ATTGTTCGTCGAAGTGAAGA+AGG | 0.542555 | 8.2:+20326555 | MS.gene033323:CDS |
| TATGTGTGGGATCTTAGCTC+AGG | 0.543218 | 8.2:+20326840 | MS.gene033323:CDS |
| CTAGCTTCAGCTGACAGGAA+TGG | 0.547140 | 8.2:+20327452 | MS.gene033323:CDS |
| AGAAGGAGTTGACAGAATTG+AGG | 0.554456 | 8.2:+20325124 | MS.gene033323:CDS |
| GTGCGATCTCTGGAAGTTTG+TGG | 0.559305 | 8.2:+20327230 | MS.gene033323:CDS |
| CTTGATGTTAGAAAAGATGA+AGG | 0.562481 | 8.2:+20325595 | MS.gene033323:CDS |
| TGAAATAATCAGTACTCTGA+AGG | 0.562507 | 8.2:+20327379 | MS.gene033323:CDS |
| GTTATCCGAGCAACTTGTTG+TGG | 0.566280 | 8.2:+20325035 | MS.gene033323:CDS |
| CTCAAACAACTTGTATGTGT+GGG | 0.569983 | 8.2:+20326827 | MS.gene033323:CDS |
| GCTCAAACAACTTGTATGTG+TGG | 0.578898 | 8.2:+20326826 | MS.gene033323:CDS |
| CTGTTGTAGCTGGAGTGGAA+TGG | 0.580319 | 8.2:+20327421 | MS.gene033323:CDS |
| AGACATGGTTCAGCGGCTAA+GGG | 0.586487 | 8.2:+20326491 | MS.gene033323:CDS |
| ACAACTTGCAAGGGAACAAG+TGG | 0.587447 | 8.2:+20326527 | MS.gene033323:CDS |
| GTTCAGCGGCTAAGGGCTAG+TGG | 0.589500 | 8.2:+20326498 | MS.gene033323:CDS |
| ATATTGCATTGACCAGTGGA+AGG | 0.590280 | 8.2:+20327183 | MS.gene033323:CDS |
| TGCGATTTCTGATATGCAGA+AGG | 0.591509 | 8.2:+20325107 | MS.gene033323:CDS |
| GGATGCTGAACGCCTAAATG+AGG | 0.592570 | 8.2:+20325616 | MS.gene033323:CDS |
| AATGCTATAAAGCTCAATCT+CGG | 0.592904 | 8.2:+20325013 | MS.gene033323:CDS |
| TACAGGCTAAATGCACATGA+AGG | 0.593778 | 8.2:+20326621 | MS.gene033323:CDS |
| ACAACAATCATGTTGCCGCT+GGG | 0.594947 | 8.2:+20327315 | MS.gene033323:CDS |
| GTGGTCTAGAACAACTTGCA+AGG | 0.596866 | 8.2:+20326517 | MS.gene033323:CDS |
| TTTATCCGTGTGTCCAGTAA+GGG | 0.597962 | 8.2:-20326877 | None:intergenic |
| TATGGGACATTCAGAGTGGA+AGG | 0.603476 | 8.2:+20327096 | MS.gene033323:CDS |
| TTGTGCGGTTGATGTTAGCA+AGG | 0.604078 | 8.2:+20326902 | MS.gene033323:CDS |
| AGGATCGTTCAGTTAAAGTG+TGG | 0.609417 | 8.2:+20326700 | MS.gene033323:CDS |
| GGATCGTTCAGTTAAAGTGT+GGG | 0.613938 | 8.2:+20326701 | MS.gene033323:CDS |
| CTTGCAAGGGAACAAGTGGA+TGG | 0.615284 | 8.2:+20326531 | MS.gene033323:CDS |
| GGAAATATTGCATTGACCAG+TGG | 0.615284 | 8.2:+20327179 | MS.gene033323:CDS |
| TGGTCTAGAACAACTTGCAA+GGG | 0.618737 | 8.2:+20326518 | MS.gene033323:CDS |
| TTCCTGTCAGCTGAAGCTAG+GGG | 0.627368 | 8.2:-20327449 | None:intergenic |
| TATTGCATTGACCAGTGGAA+GGG | 0.632302 | 8.2:+20327184 | MS.gene033323:CDS |
| TCTAGTAGATTGATTACTGG+GGG | 0.632682 | 8.2:+20326675 | MS.gene033323:CDS |
| GGTACGTACCTGAGAAACGA+TGG | 0.636424 | 8.2:-20324457 | None:intergenic |
| TGTGTCCAGTAAGGGTATGA+CGG | 0.638602 | 8.2:-20326869 | None:intergenic |
| TCATACCCTTACTGGACACA+CGG | 0.639635 | 8.2:+20326872 | MS.gene033323:CDS |
| GAGTGGAAGGCTGCTAAGTG+AGG | 0.644822 | 8.2:+20327109 | MS.gene033323:CDS |
| TGAGATCCAATACTGAGCCA+AGG | 0.644864 | 8.2:-20326764 | None:intergenic |
| AGGCTAAATGCACATGAAGG+AGG | 0.648402 | 8.2:+20326624 | MS.gene033323:CDS |
| AGAAAGTGATATTGACGTGA+CGG | 0.650603 | 8.2:-20327150 | None:intergenic |
| TGAGTGCTCTCAATTAAAGA+CGG | 0.653157 | 8.2:+20325445 | MS.gene033323:CDS |
| TATATGAAGACATGGTTCAG+CGG | 0.657419 | 8.2:+20326484 | MS.gene033323:CDS |
| GTACGTACCTGAGAAACGAT+GGG | 0.661026 | 8.2:-20324456 | None:intergenic |
| AAATGCGCTATATGAAGACA+TGG | 0.661275 | 8.2:+20326476 | MS.gene033323:CDS |
| TTCTAGTAGATTGATTACTG+GGG | 0.672008 | 8.2:+20326674 | MS.gene033323:CDS |
| CGGTTATGGGACATTCAGAG+TGG | 0.682375 | 8.2:+20327092 | MS.gene033323:CDS |
| AGATCCATCAGCAGACCCAG+CGG | 0.684840 | 8.2:-20327330 | None:intergenic |
| ACACACGGATAAAGTTTGTG+CGG | 0.689247 | 8.2:+20326887 | MS.gene033323:CDS |
| AGAAGCCACTCTGTTAACTG+TGG | 0.703135 | 8.2:-20327264 | None:intergenic |
| ACGAGCCACAGTTAACAGAG+TGG | 0.730751 | 8.2:+20327259 | MS.gene033323:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACAATTTTCATTTTTTTTA+GGG | + | chr8.2:20324488-20324507 | MS.gene033323:intron | 10.0% |
| !!! | TAACAATTTTCATTTTTTTT+AGG | + | chr8.2:20324487-20324506 | MS.gene033323:intron | 10.0% |
| !! | AAAAACTCTTATAAGTTTAT+AGG | - | chr8.2:20325937-20325956 | None:intergenic | 15.0% |
| !! | AAATGAAAATTGTTAATGAA+AGG | - | chr8.2:20324482-20324501 | None:intergenic | 15.0% |
| !! | AAATGTATTATTAGTTGAAT+CGG | - | chr8.2:20326441-20326460 | None:intergenic | 15.0% |
| !! | AAGGAAACAATAAAAAAAAA+TGG | - | chr8.2:20324548-20324567 | None:intergenic | 15.0% |
| !! | AATGAAAATTGTTAATGAAA+GGG | - | chr8.2:20324481-20324500 | None:intergenic | 15.0% |
| !! | AATTGTATTATACCTCATTT+AGG | - | chr8.2:20325631-20325650 | None:intergenic | 20.0% |
| !! | ATAAAAAAGTTCGATTAAAC+GGG | - | chr8.2:20325771-20325790 | None:intergenic | 20.0% |
| !! | ATGATTGAACTAATTTCTTA+CGG | - | chr8.2:20324581-20324600 | None:intergenic | 20.0% |
| !! | GATAAAAAAGTTCGATTAAA+CGG | - | chr8.2:20325772-20325791 | None:intergenic | 20.0% |
| !! | TTATCACAAACTAAAAATGT+TGG | - | chr8.2:20325384-20325403 | None:intergenic | 20.0% |
| !! | TTTATTGTTTCCTTTATTGT+GGG | + | chr8.2:20324554-20324573 | MS.gene033323:intron | 20.0% |
| !!! | TTTTATTGTTTCCTTTATTG+TGG | + | chr8.2:20324553-20324572 | MS.gene033323:intron | 20.0% |
| ! | AAATTAATGTTGCAAAATGC+AGG | + | chr8.2:20325420-20325439 | MS.gene033323:intron | 25.0% |
| ! | AACTCATAGTGCATAATATT+TGG | + | chr8.2:20326152-20326171 | MS.gene033323:intron | 25.0% |
| ! | AAGTTGAAATGAATTTGCAA+TGG | + | chr8.2:20325810-20325829 | MS.gene033323:intron | 25.0% |
| ! | AATAACAGATCGATTATCAT+TGG | - | chr8.2:20326796-20326815 | None:intergenic | 25.0% |
| ! | AATTAATGTTGCAAAATGCA+GGG | + | chr8.2:20325421-20325440 | MS.gene033323:intron | 25.0% |
| ! | AATTCTAGTAGATTGATTAC+TGG | + | chr8.2:20326672-20326691 | MS.gene033323:CDS | 25.0% |
| ! | ATTCTAGTAGATTGATTACT+GGG | + | chr8.2:20326673-20326692 | MS.gene033323:CDS | 25.0% |
| ! | CATATATGGTCAATATCTAA+AGG | + | chr8.2:20327356-20327375 | MS.gene033323:CDS | 25.0% |
| ! | GATGTATTTATGTTGTTGAA+GGG | + | chr8.2:20324943-20324962 | MS.gene033323:intron | 25.0% |
| ! | TAACTTTGCACAGTTAAAAT+AGG | - | chr8.2:20324805-20324824 | None:intergenic | 25.0% |
| ! | TAATTCAATGTGATCACATA+TGG | - | chr8.2:20324712-20324731 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+CGG | + | chr8.2:20325260-20325279 | MS.gene033323:intron | 25.0% |
| ! | TGATGTATTTATGTTGTTGA+AGG | + | chr8.2:20324942-20324961 | MS.gene033323:intron | 25.0% |
| ! | TTGTACTAAATAGTGTATCT+TGG | - | chr8.2:20325245-20325264 | None:intergenic | 25.0% |
| !!! | TTTTAACTGTGCAAAGTTAT+TGG | + | chr8.2:20324806-20324825 | MS.gene033323:intron | 25.0% |
| AAAGATAGTTGTTTGACTGT+AGG | + | chr8.2:20325847-20325866 | MS.gene033323:intron | 30.0% | |
| AAGTACATCAAATCCAATGT+TGG | - | chr8.2:20326075-20326094 | None:intergenic | 30.0% | |
| AATACATTTCCCATCTCTTT+AGG | + | chr8.2:20326452-20326471 | MS.gene033323:intron | 30.0% | |
| AATGCTATAAAGCTCAATCT+CGG | + | chr8.2:20325013-20325032 | MS.gene033323:CDS | 30.0% | |
| AGAATTGTACTCGAACAATA+AGG | - | chr8.2:20326658-20326677 | None:intergenic | 30.0% | |
| ATTTAGCCTGTATTTGCAAT+TGG | - | chr8.2:20326613-20326632 | None:intergenic | 30.0% | |
| CTATTCTCAATTGACAACAT+TGG | + | chr8.2:20325339-20325358 | MS.gene033323:intron | 30.0% | |
| CTTGATGTTAGAAAAGATGA+AGG | + | chr8.2:20325595-20325614 | MS.gene033323:CDS | 30.0% | |
| TAGTTCCAAAAGTTGTATAC+TGG | - | chr8.2:20325666-20325685 | None:intergenic | 30.0% | |
| TCAAACAACTATCTTTGACA+AGG | - | chr8.2:20325843-20325862 | None:intergenic | 30.0% | |
| TCAATATCACTTTCTCGAAA+TGG | + | chr8.2:20327158-20327177 | MS.gene033323:CDS | 30.0% | |
| TCACAAACTAAAAATGTTGG+TGG | - | chr8.2:20325381-20325400 | None:intergenic | 30.0% | |
| TGAAATAATCAGTACTCTGA+AGG | + | chr8.2:20327379-20327398 | MS.gene033323:CDS | 30.0% | |
| TTCTAGTAGATTGATTACTG+GGG | + | chr8.2:20326674-20326693 | MS.gene033323:CDS | 30.0% | |
| TTGAGAATAGCACAAAATAG+TGG | - | chr8.2:20325329-20325348 | None:intergenic | 30.0% | |
| ! | ACTACTAAGCACTATTCTTT+TGG | - | chr8.2:20324609-20324628 | None:intergenic | 30.0% |
| ! | AGAACCTTCTGAAAAAATTG+AGG | - | chr8.2:20325891-20325910 | None:intergenic | 30.0% |
| ! | AGTCCCAAACTTTTATAGTA+CGG | - | chr8.2:20326962-20326981 | None:intergenic | 30.0% |
| ! | TAGCTGCTATTTAACAAGAT+TGG | - | chr8.2:20325177-20325196 | None:intergenic | 30.0% |
| ! | TCATCTTTTCTAACATCAAG+CGG | - | chr8.2:20325595-20325614 | None:intergenic | 30.0% |
| !!! | ACTTTTTTATCAGCACTTGA+AGG | + | chr8.2:20325781-20325800 | MS.gene033323:intron | 30.0% |
| !!! | TGTACCTCAATTTTTTCAGA+AGG | + | chr8.2:20325884-20325903 | MS.gene033323:intron | 30.0% |
| AAACTAAGCTTCAACCTTGT+AGG | - | chr8.2:20326008-20326027 | None:intergenic | 35.0% | |
| AAAGTGTGGGATACAAATAC+AGG | + | chr8.2:20326714-20326733 | MS.gene033323:CDS | 35.0% | |
| AAATGCGCTATATGAAGACA+TGG | + | chr8.2:20326476-20326495 | MS.gene033323:CDS | 35.0% | |
| ACGACCGTACTATAAAAGTT+TGG | + | chr8.2:20326955-20326974 | MS.gene033323:CDS | 35.0% | |
| ACTTCTGATTGAATGTGTGT+TGG | + | chr8.2:20324658-20324677 | MS.gene033323:intron | 35.0% | |
| AGAAAGTGATATTGACGTGA+CGG | - | chr8.2:20327153-20327172 | None:intergenic | 35.0% | |
| AGTGTATCTTGGAACTATAG+CGG | - | chr8.2:20325234-20325253 | None:intergenic | 35.0% | |
| ATCGACATGTCCAGAAAATA+TGG | - | chr8.2:20327063-20327082 | None:intergenic | 35.0% | |
| CGACCGTACTATAAAAGTTT+GGG | + | chr8.2:20326956-20326975 | MS.gene033323:CDS | 35.0% | |
| CTCAAACAACTTGTATGTGT+GGG | + | chr8.2:20326827-20326846 | MS.gene033323:CDS | 35.0% | |
| GCTATAGAACTATTGTGTAG+CGG | + | chr8.2:20325291-20325310 | MS.gene033323:intron | 35.0% | |
| GGAATGGAATTGTTTCAATC+TGG | + | chr8.2:20327468-20327487 | MS.gene033323:CDS | 35.0% | |
| TATATGAAGACATGGTTCAG+CGG | + | chr8.2:20326484-20326503 | MS.gene033323:CDS | 35.0% | |
| TCCTTAAGTTCAAGTCTTAC+TGG | + | chr8.2:20326738-20326757 | MS.gene033323:CDS | 35.0% | |
| TCTAGTAGATTGATTACTGG+GGG | + | chr8.2:20326675-20326694 | MS.gene033323:CDS | 35.0% | |
| TCTCAATTGACAACATTGGT+TGG | + | chr8.2:20325343-20325362 | MS.gene033323:intron | 35.0% | |
| TGAGTGCTCTCAATTAAAGA+CGG | + | chr8.2:20325445-20325464 | MS.gene033323:CDS | 35.0% | |
| TGTTGTCAAATAGCGGTTAT+AGG | + | chr8.2:20325267-20325286 | MS.gene033323:intron | 35.0% | |
| TTAACAGAGTGGCTTCTAAT+TGG | + | chr8.2:20327270-20327289 | MS.gene033323:CDS | 35.0% | |
| TTATTTGAGAAGCTCCTACA+AGG | + | chr8.2:20325991-20326010 | MS.gene033323:intron | 35.0% | |
| TTCAGAACTGAAAACACAAC+TGG | + | chr8.2:20325514-20325533 | MS.gene033323:CDS | 35.0% | |
| TTCAGAATGTTGCTCGATAT+TGG | + | chr8.2:20324847-20324866 | MS.gene033323:intron | 35.0% | |
| ! | AAAGTTTGGGACTTGATGAA+AGG | + | chr8.2:20326969-20326988 | MS.gene033323:CDS | 35.0% |
| ! | ATATTTTCTGGACATGTCGA+TGG | + | chr8.2:20327062-20327081 | MS.gene033323:CDS | 35.0% |
| ! | ATTTTCAGCTTCAGCTTCAT+TGG | - | chr8.2:20325558-20325577 | None:intergenic | 35.0% |
| ! | CTATACATTTTCCGTGTGAA+TGG | + | chr8.2:20325698-20325717 | MS.gene033323:intron | 35.0% |
| ! | CTCTCAATTAAAGACGGATT+TGG | + | chr8.2:20325451-20325470 | MS.gene033323:CDS | 35.0% |
| ! | TCAATCGCAACTTGTTCTTT+CGG | - | chr8.2:20324348-20324367 | None:intergenic | 35.0% |
| !! | ATTTTCCGTGTGAATGGATT+TGG | + | chr8.2:20325704-20325723 | MS.gene033323:intron | 35.0% |
| ACACACGGATAAAGTTTGTG+CGG | + | chr8.2:20326887-20326906 | MS.gene033323:CDS | 40.0% | |
| AGAAGGAGTTGACAGAATTG+AGG | + | chr8.2:20325124-20325143 | MS.gene033323:CDS | 40.0% | |
| AGCCTGTATTTGCAATTGGA+AGG | - | chr8.2:20326609-20326628 | None:intergenic | 40.0% | |
| AGGATCGTTCAGTTAAAGTG+TGG | + | chr8.2:20326700-20326719 | MS.gene033323:CDS | 40.0% | |
| ATTGTTCGTCGAAGTGAAGA+AGG | + | chr8.2:20326555-20326574 | MS.gene033323:CDS | 40.0% | |
| CAAAGCCAAATCCATTCACA+CGG | - | chr8.2:20325712-20325731 | None:intergenic | 40.0% | |
| CAAATTCTGCTACGGTATAG+CGG | - | chr8.2:20325205-20325224 | None:intergenic | 40.0% | |
| CAGCAATTTCACACCAACAT+TGG | + | chr8.2:20326059-20326078 | MS.gene033323:intron | 40.0% | |
| CGATGGTAATCTTCGGTTAT+GGG | + | chr8.2:20327079-20327098 | MS.gene033323:CDS | 40.0% | |
| GAAAGAGAAAGCAGAGAACT+TGG | + | chr8.2:20324975-20324994 | MS.gene033323:CDS | 40.0% | |
| GACATGTCGATGGTAATCTT+CGG | + | chr8.2:20327072-20327091 | MS.gene033323:CDS | 40.0% | |
| GCCAGTAAGACTTGAACTTA+AGG | - | chr8.2:20326742-20326761 | None:intergenic | 40.0% | |
| GCCTGTATTTGCAATTGGAA+GGG | - | chr8.2:20326608-20326627 | None:intergenic | 40.0% | |
| GCTCAAACAACTTGTATGTG+TGG | + | chr8.2:20326826-20326845 | MS.gene033323:CDS | 40.0% | |
| GGATCGTTCAGTTAAAGTGT+GGG | + | chr8.2:20326701-20326720 | MS.gene033323:CDS | 40.0% | |
| GGTTTGTCCAAATTCTGCTA+CGG | - | chr8.2:20325213-20325232 | None:intergenic | 40.0% | |
| GTTATTAACTCTTGTAGCGC+CGG | + | chr8.2:20324634-20324653 | MS.gene033323:intron | 40.0% | |
| TACAGGCTAAATGCACATGA+AGG | + | chr8.2:20326621-20326640 | MS.gene033323:CDS | 40.0% | |
| TACTTCCACAACAAGTTGCT+CGG | - | chr8.2:20325043-20325062 | None:intergenic | 40.0% | |
| TCCCTTCCAATTGCAAATAC+AGG | + | chr8.2:20326604-20326623 | MS.gene033323:CDS | 40.0% | |
| TCGATGGTAATCTTCGGTTA+TGG | + | chr8.2:20327078-20327097 | MS.gene033323:CDS | 40.0% | |
| TGCGATTTCTGATATGCAGA+AGG | + | chr8.2:20325107-20325126 | MS.gene033323:CDS | 40.0% | |
| TTCTTACGGACCCACAATAA+AGG | - | chr8.2:20324567-20324586 | None:intergenic | 40.0% | |
| TTGGTTGCTTGGATAGTTGA+TGG | + | chr8.2:20324877-20324896 | MS.gene033323:intron | 40.0% | |
| TTTATCCGTGTGTCCAGTAA+GGG | - | chr8.2:20326880-20326899 | None:intergenic | 40.0% | |
| TTTGGCAAGTTGTGCAATCT+TGG | + | chr8.2:20325728-20325747 | MS.gene033323:intron | 40.0% | |
| TTTGTTTGATGTGCGATCTC+TGG | + | chr8.2:20327220-20327239 | MS.gene033323:CDS | 40.0% | |
| ! | ACACATTCAATCAGAAGTGC+CGG | - | chr8.2:20324656-20324675 | None:intergenic | 40.0% |
| ! | ACATTGGTTGGAACTTGGAA+CGG | + | chr8.2:20325355-20325374 | MS.gene033323:intron | 40.0% |
| ! | ATATTGCATTGACCAGTGGA+AGG | + | chr8.2:20327183-20327202 | MS.gene033323:CDS | 40.0% |
| ! | CTCGTCCAGTATACAACTTT+TGG | + | chr8.2:20325658-20325677 | MS.gene033323:intron | 40.0% |
| ! | CTGATGGATCTGTGCATATA+TGG | + | chr8.2:20327342-20327361 | MS.gene033323:CDS | 40.0% |
| ! | GATGGACAGACCATATTTTC+TGG | + | chr8.2:20327050-20327069 | MS.gene033323:CDS | 40.0% |
| ! | GGAAATATTGCATTGACCAG+TGG | + | chr8.2:20327179-20327198 | MS.gene033323:CDS | 40.0% |
| ! | TATTGCATTGACCAGTGGAA+GGG | + | chr8.2:20327184-20327203 | MS.gene033323:CDS | 40.0% |
| ! | TGACAACATTGGTTGGAACT+TGG | + | chr8.2:20325350-20325369 | MS.gene033323:intron | 40.0% |
| ! | TGGTCTAGAACAACTTGCAA+GGG | + | chr8.2:20326518-20326537 | MS.gene033323:CDS | 40.0% |
| !! | GCTCGATATTGGTGTTAAGT+TGG | + | chr8.2:20324858-20324877 | MS.gene033323:intron | 40.0% |
| !! | GTTCACATCATAGTCTTGTG+AGG | - | chr8.2:20326370-20326389 | None:intergenic | 40.0% |
| !! | TTGGTGTTAAGTTGGTTGCT+TGG | + | chr8.2:20324866-20324885 | MS.gene033323:intron | 40.0% |
| !!! | TGTTGTTGAAGGGTTTTGAG+TGG | + | chr8.2:20324953-20324972 | MS.gene033323:intron | 40.0% |
| AAACGCCATCTTCTCGAAGA+AGG | + | chr8.2:20324399-20324418 | MS.gene033323:CDS | 45.0% | |
| ACAACAATCATGTTGCCGCT+GGG | + | chr8.2:20327315-20327334 | MS.gene033323:CDS | 45.0% | |
| ACAACTTGCAAGGGAACAAG+TGG | + | chr8.2:20326527-20326546 | MS.gene033323:CDS | 45.0% | |
| AGAAGCCACTCTGTTAACTG+TGG | - | chr8.2:20327267-20327286 | None:intergenic | 45.0% | |
| AGCGCATTTGCCTAAAGAGA+TGG | - | chr8.2:20326465-20326484 | None:intergenic | 45.0% | |
| AGGCTAAATGCACATGAAGG+AGG | + | chr8.2:20326624-20326643 | MS.gene033323:CDS | 45.0% | |
| AGGTAAATGACACTTGCCAG+TGG | - | chr8.2:20326036-20326055 | None:intergenic | 45.0% | |
| ATTCCTGTCAGCTGAAGCTA+GGG | - | chr8.2:20327453-20327472 | None:intergenic | 45.0% | |
| CGCTATACCGTAGCAGAATT+TGG | + | chr8.2:20325203-20325222 | MS.gene033323:intron | 45.0% | |
| CTTCTGTTCTCTGTTGTAGC+TGG | + | chr8.2:20327411-20327430 | MS.gene033323:CDS | 45.0% | |
| CTTTATCCGTGTGTCCAGTA+AGG | - | chr8.2:20326881-20326900 | None:intergenic | 45.0% | |
| GAAAGCAGAGAACTTGGAAG+TGG | + | chr8.2:20324981-20325000 | MS.gene033323:CDS | 45.0% | |
| GCGCATTTGCCTAAAGAGAT+GGG | - | chr8.2:20326464-20326483 | None:intergenic | 45.0% | |
| GTACGTACCTGAGAAACGAT+GGG | - | chr8.2:20324459-20324478 | None:intergenic | 45.0% | |
| GTGCAAATTATCCCTTCCAC+TGG | - | chr8.2:20327198-20327217 | None:intergenic | 45.0% | |
| GTTCACAACACAGTCTCGTT+AGG | - | chr8.2:20326226-20326245 | None:intergenic | 45.0% | |
| TAGATTGATTACTGGGGGAC+AGG | + | chr8.2:20326680-20326699 | MS.gene033323:CDS | 45.0% | |
| TATGGGACATTCAGAGTGGA+AGG | + | chr8.2:20327096-20327115 | MS.gene033323:CDS | 45.0% | |
| TATGTGTGGGATCTTAGCTC+AGG | + | chr8.2:20326840-20326859 | MS.gene033323:CDS | 45.0% | |
| TCATACCCTTACTGGACACA+CGG | + | chr8.2:20326872-20326891 | MS.gene033323:CDS | 45.0% | |
| TGAGATCCAATACTGAGCCA+AGG | - | chr8.2:20326767-20326786 | None:intergenic | 45.0% | |
| TGTTGTAGCTGGAGTGGAAT+GGG | + | chr8.2:20327422-20327441 | MS.gene033323:CDS | 45.0% | |
| TTCTAGACCCATCGTTTCTC+AGG | + | chr8.2:20324449-20324468 | MS.gene033323:CDS | 45.0% | |
| TTGGTGTGAAATTGCTGAGC+AGG | - | chr8.2:20326056-20326075 | None:intergenic | 45.0% | |
| ! | CGTGTGAATGGATTTGGCTT+TGG | + | chr8.2:20325710-20325729 | MS.gene033323:intron | 45.0% |
| ! | CTAGAAAGTGCGAGAAAAGC+AGG | - | chr8.2:20324435-20324454 | None:intergenic | 45.0% |
| ! | GTGGTCTAGAACAACTTGCA+AGG | + | chr8.2:20326517-20326536 | MS.gene033323:CDS | 45.0% |
| ! | TGTGTCCAGTAAGGGTATGA+CGG | - | chr8.2:20326872-20326891 | None:intergenic | 45.0% |
| ! | TGTTGGTGTCTGACATGTGT+CGG | + | chr8.2:20324675-20324694 | MS.gene033323:intron | 45.0% |
| ! | TTGTGCGGTTGATGTTAGCA+AGG | + | chr8.2:20326902-20326921 | MS.gene033323:CDS | 45.0% |
| !! | CAAAGAGCATTGCAGTTGCT+GGG | - | chr8.2:20327020-20327039 | None:intergenic | 45.0% |
| !! | GTTATCCGAGCAACTTGTTG+TGG | + | chr8.2:20325035-20325054 | MS.gene033323:CDS | 45.0% |
| AAATGACACTTGCCAGTGGC+AGG | - | chr8.2:20326032-20326051 | None:intergenic | 50.0% | |
| AAGACATGGTTCAGCGGCTA+AGG | + | chr8.2:20326490-20326509 | MS.gene033323:CDS | 50.0% | |
| ACGAGCCACAGTTAACAGAG+TGG | + | chr8.2:20327259-20327278 | MS.gene033323:CDS | 50.0% | |
| AGACATGGTTCAGCGGCTAA+GGG | + | chr8.2:20326491-20326510 | MS.gene033323:CDS | 50.0% | |
| CATTCCTGTCAGCTGAAGCT+AGG | - | chr8.2:20327454-20327473 | None:intergenic | 50.0% | |
| CGGTTATGGGACATTCAGAG+TGG | + | chr8.2:20327092-20327111 | MS.gene033323:CDS | 50.0% | |
| CTAGCTTCAGCTGACAGGAA+TGG | + | chr8.2:20327452-20327471 | MS.gene033323:CDS | 50.0% | |
| CTGTTGTAGCTGGAGTGGAA+TGG | + | chr8.2:20327421-20327440 | MS.gene033323:CDS | 50.0% | |
| CTTGCAAGGGAACAAGTGGA+TGG | + | chr8.2:20326531-20326550 | MS.gene033323:CDS | 50.0% | |
| GACAACAATCATGTTGCCGC+TGG | + | chr8.2:20327314-20327333 | MS.gene033323:CDS | 50.0% | |
| GCGGCAACATGATTGTTGTC+TGG | - | chr8.2:20327314-20327333 | None:intergenic | 50.0% | |
| GCTCTTTGCTTCAGCACAGA+TGG | + | chr8.2:20327032-20327051 | MS.gene033323:CDS | 50.0% | |
| GGATGCTGAACGCCTAAATG+AGG | + | chr8.2:20325616-20325635 | MS.gene033323:CDS | 50.0% | |
| GGCAAGTTGTGCAATCTTGG+TGG | + | chr8.2:20325731-20325750 | MS.gene033323:intron | 50.0% | |
| GGTACGTACCTGAGAAACGA+TGG | - | chr8.2:20324460-20324479 | None:intergenic | 50.0% | |
| GTTCTCTGTTGTAGCTGGAG+TGG | + | chr8.2:20327416-20327435 | MS.gene033323:CDS | 50.0% | |
| TTCCTGTCAGCTGAAGCTAG+GGG | - | chr8.2:20327452-20327471 | None:intergenic | 50.0% | |
| ! | GTGCGATCTCTGGAAGTTTG+TGG | + | chr8.2:20327230-20327249 | MS.gene033323:CDS | 50.0% |
| ! | TCAAGTCTTACTGGCTGCCT+TGG | + | chr8.2:20326747-20326766 | MS.gene033323:CDS | 50.0% |
| !! | AAGCTTAGTTTGCCTGCCAC+TGG | + | chr8.2:20326017-20326036 | MS.gene033323:intron | 50.0% |
| !! | GCAAAGAGCATTGCAGTTGC+TGG | - | chr8.2:20327021-20327040 | None:intergenic | 50.0% |
| AACCCCTAGCTTCAGCTGAC+AGG | + | chr8.2:20327447-20327466 | MS.gene033323:CDS | 55.0% | |
| AGATCCATCAGCAGACCCAG+CGG | - | chr8.2:20327333-20327352 | None:intergenic | 55.0% | |
| CGAGTCCGTCATACCCTTAC+TGG | + | chr8.2:20326864-20326883 | MS.gene033323:CDS | 55.0% | |
| GAGCGCCTTCTTCGAGAAGA+TGG | - | chr8.2:20324407-20324426 | None:intergenic | 55.0% | |
| GAGTGGAAGGCTGCTAAGTG+AGG | + | chr8.2:20327109-20327128 | MS.gene033323:CDS | 55.0% | |
| TGGCTGCCTTGGCTCAGTAT+TGG | + | chr8.2:20326758-20326777 | MS.gene033323:CDS | 55.0% | |
| GTTCAGCGGCTAAGGGCTAG+TGG | + | chr8.2:20326498-20326517 | MS.gene033323:CDS | 60.0% | |
| GTTGCCGCTGGGTCTGCTGA+TGG | + | chr8.2:20327326-20327345 | MS.gene033323:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 20324327 | 20327496 | 20324327 | ID=MS.gene033323 |
| chr8.2 | mRNA | 20324327 | 20327496 | 20324327 | ID=MS.gene033323.t1;Parent=MS.gene033323 |
| chr8.2 | exon | 20324327 | 20324470 | 20324327 | ID=MS.gene033323.t1.exon1;Parent=MS.gene033323.t1 |
| chr8.2 | CDS | 20324327 | 20324470 | 20324327 | ID=cds.MS.gene033323.t1;Parent=MS.gene033323.t1 |
| chr8.2 | exon | 20324964 | 20325145 | 20324964 | ID=MS.gene033323.t1.exon2;Parent=MS.gene033323.t1 |
| chr8.2 | CDS | 20324964 | 20325145 | 20324964 | ID=cds.MS.gene033323.t1;Parent=MS.gene033323.t1 |
| chr8.2 | exon | 20325442 | 20325637 | 20325442 | ID=MS.gene033323.t1.exon3;Parent=MS.gene033323.t1 |
| chr8.2 | CDS | 20325442 | 20325637 | 20325442 | ID=cds.MS.gene033323.t1;Parent=MS.gene033323.t1 |
| chr8.2 | exon | 20326474 | 20327496 | 20326474 | ID=MS.gene033323.t1.exon4;Parent=MS.gene033323.t1 |
| chr8.2 | CDS | 20326474 | 20327496 | 20326474 | ID=cds.MS.gene033323.t1;Parent=MS.gene033323.t1 |
| Gene Sequence |
| Protein sequence |
