Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48297.t1 | RHN63421.1 | 95.3 | 514 | 24 | 0 | 1 | 514 | 1 | 514 | 2.80E-220 | 774.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48297.t1 | Q6NNP0 | 59.4 | 507 | 206 | 0 | 8 | 514 | 3 | 509 | 5.6e-169 | 595.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48297.t1 | A0A396IF41 | 95.3 | 514 | 24 | 0 | 1 | 514 | 1 | 514 | 2.0e-220 | 774.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene48297 | 0.851982 | 6.22E-61 | -1.69E-46 |
| MS.gene049159 | MS.gene48297 | 0.815736 | 7.93E-52 | -1.69E-46 |
| MS.gene049254 | MS.gene48297 | 0.866952 | 1.96E-65 | -1.69E-46 |
| MS.gene049350 | MS.gene48297 | 0.808886 | 2.48E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene48297 | 0.814386 | 1.58E-51 | -1.69E-46 |
| MS.gene049452 | MS.gene48297 | 0.800661 | 1.30E-48 | -1.69E-46 |
| MS.gene049585 | MS.gene48297 | 0.821268 | 4.42E-53 | -1.69E-46 |
| MS.gene049711 | MS.gene48297 | 0.836124 | 1.12E-56 | -1.69E-46 |
| MS.gene049807 | MS.gene48297 | 0.830892 | 2.27E-55 | -1.69E-46 |
| MS.gene049850 | MS.gene48297 | 0.811113 | 8.24E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene48297 | 0.845767 | 3.31E-59 | -1.69E-46 |
| MS.gene050221 | MS.gene48297 | 0.802394 | 5.73E-49 | -1.69E-46 |
| MS.gene050273 | MS.gene48297 | 0.82564 | 4.20E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene48297 | 0.806897 | 6.58E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene48297 | 0.851356 | 9.36E-61 | -1.69E-46 |
| MS.gene050561 | MS.gene48297 | 0.844434 | 7.58E-59 | -1.69E-46 |
| MS.gene050562 | MS.gene48297 | 0.841304 | 5.15E-58 | -1.69E-46 |
| MS.gene050646 | MS.gene48297 | 0.814204 | 1.74E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene48297 | 0.810186 | 1.31E-50 | -1.69E-46 |
| MS.gene050689 | MS.gene48297 | 0.802248 | 6.14E-49 | -1.69E-46 |
| MS.gene050759 | MS.gene48297 | 0.811574 | 6.54E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene48297 | 0.820542 | 6.49E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene48297 | 0.809816 | 1.57E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene48297 | 0.842861 | 2.00E-58 | -1.69E-46 |
| MS.gene051332 | MS.gene48297 | 0.822686 | 2.07E-53 | -1.69E-46 |
| MS.gene051490 | MS.gene48297 | 0.805195 | 1.50E-49 | -1.69E-46 |
| MS.gene051628 | MS.gene48297 | 0.801084 | 1.06E-48 | -1.69E-46 |
| MS.gene051720 | MS.gene48297 | 0.804794 | 1.82E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene48297 | 0.844524 | 7.17E-59 | -1.69E-46 |
| MS.gene051800 | MS.gene48297 | 0.82029 | 7.42E-53 | -1.69E-46 |
| MS.gene052037 | MS.gene48297 | 0.83947 | 1.55E-57 | -1.69E-46 |
| MS.gene052239 | MS.gene48297 | -0.800696 | 1.28E-48 | -1.69E-46 |
| MS.gene052307 | MS.gene48297 | 0.836439 | 9.35E-57 | -1.69E-46 |
| MS.gene052463 | MS.gene48297 | 0.858607 | 7.34E-63 | -1.69E-46 |
| MS.gene052514 | MS.gene48297 | 0.800925 | 1.15E-48 | -1.69E-46 |
| MS.gene052516 | MS.gene48297 | 0.860129 | 2.56E-63 | -1.69E-46 |
| MS.gene052519 | MS.gene48297 | 0.810155 | 1.33E-50 | -1.69E-46 |
| MS.gene052533 | MS.gene48297 | 0.824018 | 1.01E-53 | -1.69E-46 |
| MS.gene052534 | MS.gene48297 | 0.802233 | 6.18E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene48297 | 0.807113 | 5.92E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene48297 | 0.800926 | 1.15E-48 | -1.69E-46 |
| MS.gene052609 | MS.gene48297 | 0.821192 | 4.60E-53 | -1.69E-46 |
| MS.gene052773 | MS.gene48297 | 0.825569 | 4.36E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene48297 | 0.815121 | 1.09E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene48297 | 0.842761 | 2.12E-58 | -1.69E-46 |
| MS.gene053226 | MS.gene48297 | 0.838544 | 2.70E-57 | -1.69E-46 |
| MS.gene05350 | MS.gene48297 | 0.816904 | 4.35E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene48297 | 0.80171 | 7.92E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene48297 | 0.81405 | 1.88E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene48297 | 0.808441 | 3.09E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene48297 | 0.808062 | 3.72E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene48297 | 0.812104 | 5.02E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene48297 | 0.864592 | 1.09E-64 | -1.69E-46 |
| MS.gene054892 | MS.gene48297 | 0.805633 | 1.21E-49 | -1.69E-46 |
| MS.gene054893 | MS.gene48297 | 0.804244 | 2.37E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene48297 | 0.807722 | 4.40E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene48297 | 0.809751 | 1.62E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene48297 | 0.81019 | 1.30E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene48297 | 0.809983 | 1.44E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene48297 | 0.843794 | 1.13E-58 | -1.69E-46 |
| MS.gene055724 | MS.gene48297 | 0.831222 | 1.89E-55 | -1.69E-46 |
| MS.gene055778 | MS.gene48297 | 0.803451 | 3.46E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene48297 | 0.823873 | 1.10E-53 | -1.69E-46 |
| MS.gene055864 | MS.gene48297 | 0.820205 | 7.76E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene48297 | 0.800125 | 1.67E-48 | -1.69E-46 |
| MS.gene05604 | MS.gene48297 | 0.813022 | 3.16E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene48297 | 0.808714 | 2.70E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene48297 | 0.842414 | 2.62E-58 | -1.69E-46 |
| MS.gene056308 | MS.gene48297 | 0.820915 | 5.33E-53 | -1.69E-46 |
| MS.gene056507 | MS.gene48297 | 0.819513 | 1.12E-52 | -1.69E-46 |
| MS.gene056595 | MS.gene48297 | 0.802443 | 5.60E-49 | -1.69E-46 |
| MS.gene056677 | MS.gene48297 | 0.800938 | 1.14E-48 | -1.69E-46 |
| MS.gene056699 | MS.gene48297 | 0.848741 | 5.05E-60 | -1.69E-46 |
| MS.gene056776 | MS.gene48297 | 0.815053 | 1.13E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene48297 | 0.859448 | 4.11E-63 | -1.69E-46 |
| MS.gene05690 | MS.gene48297 | 0.807384 | 5.19E-50 | -1.69E-46 |
| MS.gene057034 | MS.gene48297 | 0.850271 | 1.89E-60 | -1.69E-46 |
| MS.gene057102 | MS.gene48297 | 0.830481 | 2.87E-55 | -1.69E-46 |
| MS.gene057208 | MS.gene48297 | 0.823435 | 1.39E-53 | -1.69E-46 |
| MS.gene057869 | MS.gene48297 | 0.814802 | 1.28E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene48297 | 0.826323 | 2.89E-54 | -1.69E-46 |
| MS.gene058008 | MS.gene48297 | 0.800461 | 1.43E-48 | -1.69E-46 |
| MS.gene058009 | MS.gene48297 | 0.806016 | 1.01E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene48297 | 0.849857 | 2.47E-60 | -1.69E-46 |
| MS.gene058037 | MS.gene48297 | 0.80367 | 3.12E-49 | -1.69E-46 |
| MS.gene058289 | MS.gene48297 | 0.800743 | 1.25E-48 | -1.69E-46 |
| MS.gene058339 | MS.gene48297 | 0.804463 | 2.13E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene48297 | 0.836003 | 1.21E-56 | -1.69E-46 |
| MS.gene058781 | MS.gene48297 | 0.804624 | 1.98E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene48297 | 0.815327 | 9.78E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene48297 | 0.825257 | 5.17E-54 | -1.69E-46 |
| MS.gene05897 | MS.gene48297 | 0.810883 | 9.24E-51 | -1.69E-46 |
| MS.gene059015 | MS.gene48297 | 0.805374 | 1.38E-49 | -1.69E-46 |
| MS.gene059283 | MS.gene48297 | 0.811545 | 6.63E-51 | -1.69E-46 |
| MS.gene059570 | MS.gene48297 | 0.810842 | 9.42E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene48297 | 0.80852 | 2.98E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene48297 | -0.803225 | 3.86E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene48297 | 0.883823 | 3.24E-71 | -1.69E-46 |
| MS.gene060167 | MS.gene48297 | 0.824674 | 7.10E-54 | -1.69E-46 |
| MS.gene060373 | MS.gene48297 | 0.808798 | 2.59E-50 | -1.69E-46 |
| MS.gene060521 | MS.gene48297 | 0.800401 | 1.47E-48 | -1.69E-46 |
| MS.gene06052 | MS.gene48297 | 0.827614 | 1.42E-54 | -1.69E-46 |
| MS.gene060777 | MS.gene48297 | 0.806934 | 6.46E-50 | -1.69E-46 |
| MS.gene060840 | MS.gene48297 | 0.826155 | 3.17E-54 | -1.69E-46 |
| MS.gene060932 | MS.gene48297 | 0.829133 | 6.10E-55 | -1.69E-46 |
| MS.gene060933 | MS.gene48297 | 0.802172 | 6.36E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene48297 | 0.831518 | 1.60E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene48297 | 0.832072 | 1.16E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene48297 | 0.810834 | 9.46E-51 | -1.69E-46 |
| MS.gene061188 | MS.gene48297 | 0.821222 | 4.53E-53 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48297.t1 | MTR_4g104380 | 98.638 | 514 | 7 | 0 | 1 | 514 | 1 | 514 | 0.0 | 1041 |
| MS.gene48297.t1 | MTR_3g075400 | 74.606 | 508 | 129 | 0 | 7 | 514 | 2 | 509 | 0.0 | 787 |
| MS.gene48297.t1 | MTR_4g007500 | 78.643 | 398 | 32 | 4 | 30 | 427 | 20 | 364 | 0.0 | 610 |
| MS.gene48297.t1 | MTR_6g027280 | 52.353 | 170 | 35 | 5 | 48 | 199 | 95 | 236 | 8.00e-36 | 134 |
| MS.gene48297.t1 | MTR_8g092620 | 27.397 | 292 | 200 | 6 | 226 | 513 | 14 | 297 | 1.81e-31 | 123 |
| MS.gene48297.t1 | MTR_8g092620 | 28.571 | 273 | 183 | 6 | 226 | 494 | 21 | 285 | 1.54e-29 | 119 |
| MS.gene48297.t1 | MTR_4g119620 | 29.804 | 255 | 167 | 6 | 228 | 475 | 76 | 325 | 1.56e-29 | 119 |
| MS.gene48297.t1 | MTR_4g119620 | 26.792 | 265 | 175 | 7 | 263 | 513 | 18 | 277 | 3.24e-19 | 89.0 |
| MS.gene48297.t1 | MTR_7g086360 | 27.206 | 272 | 193 | 2 | 226 | 492 | 51 | 322 | 1.28e-27 | 114 |
| MS.gene48297.t1 | MTR_7g086360 | 27.143 | 210 | 138 | 6 | 310 | 513 | 51 | 251 | 7.16e-15 | 76.3 |
| MS.gene48297.t1 | MTR_4g102520 | 25.962 | 312 | 206 | 8 | 218 | 513 | 282 | 584 | 2.16e-24 | 107 |
| MS.gene48297.t1 | MTR_4g102520 | 33.019 | 106 | 65 | 3 | 289 | 392 | 273 | 374 | 7.81e-12 | 68.2 |
| MS.gene48297.t1 | MTR_1g072140 | 26.073 | 303 | 214 | 6 | 219 | 513 | 12 | 312 | 3.55e-22 | 97.8 |
| MS.gene48297.t1 | MTR_8g092620 | 28.837 | 215 | 143 | 5 | 226 | 436 | 14 | 222 | 5.63e-22 | 95.1 |
| MS.gene48297.t1 | MTR_8g106790 | 26.623 | 308 | 177 | 9 | 241 | 513 | 27 | 320 | 1.15e-21 | 96.3 |
| MS.gene48297.t1 | MTR_8g106790 | 25.455 | 275 | 173 | 8 | 225 | 475 | 58 | 324 | 3.43e-16 | 80.1 |
| MS.gene48297.t1 | MTR_8g106790 | 27.027 | 222 | 140 | 7 | 306 | 513 | 7 | 220 | 1.87e-13 | 72.0 |
| MS.gene48297.t1 | MTR_2g012630 | 26.906 | 223 | 157 | 3 | 245 | 466 | 31 | 248 | 1.79e-20 | 95.9 |
| MS.gene48297.t1 | MTR_2g012630 | 26.974 | 152 | 109 | 2 | 228 | 378 | 98 | 248 | 3.34e-15 | 79.3 |
| MS.gene48297.t1 | MTR_2g012630 | 24.123 | 228 | 163 | 4 | 285 | 509 | 29 | 249 | 4.27e-15 | 79.0 |
| MS.gene48297.t1 | MTR_2g012630 | 26.906 | 223 | 157 | 3 | 245 | 466 | 31 | 248 | 1.95e-20 | 95.9 |
| MS.gene48297.t1 | MTR_2g012630 | 26.974 | 152 | 109 | 2 | 228 | 378 | 98 | 248 | 3.13e-15 | 79.3 |
| MS.gene48297.t1 | MTR_2g012630 | 24.123 | 228 | 163 | 4 | 285 | 509 | 29 | 249 | 5.20e-15 | 78.6 |
| MS.gene48297.t1 | MTR_6g004040 | 27.049 | 244 | 168 | 5 | 224 | 462 | 7 | 245 | 2.21e-20 | 95.5 |
| MS.gene48297.t1 | MTR_6g004040 | 25.339 | 221 | 155 | 4 | 284 | 501 | 29 | 242 | 1.18e-16 | 83.6 |
| MS.gene48297.t1 | MTR_6g004040 | 24.103 | 195 | 146 | 2 | 221 | 414 | 50 | 243 | 1.42e-12 | 70.9 |
| MS.gene48297.t1 | MTR_6g004040 | 21.154 | 208 | 153 | 4 | 310 | 513 | 12 | 212 | 2.64e-11 | 66.6 |
| MS.gene48297.t1 | MTR_1g072740 | 27.444 | 266 | 167 | 8 | 218 | 468 | 281 | 535 | 5.33e-18 | 87.4 |
| MS.gene48297.t1 | MTR_1g072740 | 33.019 | 106 | 65 | 3 | 289 | 392 | 272 | 373 | 5.89e-12 | 68.6 |
| MS.gene48297.t1 | MTR_4g105700 | 26.394 | 269 | 175 | 8 | 263 | 514 | 350 | 612 | 9.48e-18 | 87.4 |
| MS.gene48297.t1 | MTR_4g105700 | 31.351 | 185 | 116 | 5 | 253 | 427 | 41 | 224 | 3.18e-16 | 82.4 |
| MS.gene48297.t1 | MTR_8g104010 | 25.322 | 233 | 163 | 4 | 283 | 513 | 600 | 823 | 6.40e-17 | 84.7 |
| MS.gene48297.t1 | MTR_8g104010 | 26.119 | 268 | 163 | 13 | 226 | 471 | 669 | 923 | 6.54e-13 | 72.0 |
| MS.gene48297.t1 | MTR_8g104010 | 25.322 | 233 | 163 | 4 | 283 | 513 | 517 | 740 | 6.94e-17 | 84.3 |
| MS.gene48297.t1 | MTR_8g104010 | 26.119 | 268 | 163 | 13 | 226 | 471 | 586 | 840 | 5.80e-13 | 72.0 |
| MS.gene48297.t1 | MTR_8g104010 | 25.322 | 233 | 163 | 4 | 283 | 513 | 880 | 1103 | 1.11e-16 | 84.0 |
| MS.gene48297.t1 | MTR_8g104010 | 26.119 | 268 | 163 | 13 | 226 | 471 | 949 | 1203 | 6.93e-13 | 72.0 |
| MS.gene48297.t1 | MTR_1g097140 | 24.912 | 285 | 199 | 7 | 225 | 504 | 118 | 392 | 1.36e-16 | 82.4 |
| MS.gene48297.t1 | MTR_1g097140 | 24.306 | 288 | 155 | 8 | 224 | 498 | 74 | 311 | 5.68e-11 | 64.7 |
| MS.gene48297.t1 | MTR_3g045130 | 22.892 | 249 | 180 | 3 | 267 | 514 | 274 | 511 | 4.12e-16 | 81.3 |
| MS.gene48297.t1 | MTR_3g045130 | 23.320 | 253 | 184 | 5 | 232 | 482 | 277 | 521 | 4.78e-12 | 68.6 |
| MS.gene48297.t1 | MTR_2g436510 | 22.222 | 261 | 185 | 7 | 224 | 477 | 163 | 412 | 5.21e-16 | 80.9 |
| MS.gene48297.t1 | MTR_8g038550 | 22.635 | 296 | 181 | 5 | 221 | 514 | 216 | 465 | 2.00e-15 | 79.7 |
| MS.gene48297.t1 | MTR_3g106080 | 27.815 | 302 | 188 | 11 | 218 | 513 | 337 | 614 | 5.77e-15 | 78.2 |
| MS.gene48297.t1 | MTR_3g106080 | 21.951 | 205 | 158 | 2 | 226 | 429 | 415 | 618 | 1.36e-11 | 67.4 |
| MS.gene48297.t1 | MTR_1g054300 | 27.660 | 141 | 101 | 1 | 202 | 342 | 342 | 481 | 1.31e-14 | 76.6 |
| MS.gene48297.t1 | MTR_1g054300 | 25.630 | 238 | 146 | 7 | 245 | 471 | 264 | 481 | 1.33e-11 | 67.0 |
| MS.gene48297.t1 | MTR_4g095058 | 23.000 | 300 | 172 | 6 | 223 | 512 | 321 | 571 | 2.10e-14 | 76.3 |
| MS.gene48297.t1 | MTR_4g095058 | 23.000 | 300 | 172 | 6 | 223 | 512 | 323 | 573 | 2.26e-14 | 76.3 |
| MS.gene48297.t1 | MTR_2g019400 | 27.011 | 174 | 114 | 3 | 316 | 489 | 2 | 162 | 7.15e-14 | 72.4 |
| MS.gene48297.t1 | MTR_3g449990 | 24.522 | 314 | 209 | 11 | 215 | 513 | 255 | 555 | 1.22e-13 | 73.9 |
| MS.gene48297.t1 | MTR_5g016350 | 23.381 | 278 | 195 | 6 | 245 | 512 | 245 | 514 | 3.11e-13 | 72.4 |
| MS.gene48297.t1 | MTR_5g016350 | 23.381 | 278 | 195 | 6 | 245 | 512 | 309 | 578 | 3.75e-13 | 72.4 |
| MS.gene48297.t1 | MTR_5g016370 | 23.022 | 278 | 196 | 7 | 245 | 512 | 321 | 590 | 8.26e-13 | 71.2 |
| MS.gene48297.t1 | MTR_2g016690 | 23.693 | 287 | 193 | 8 | 245 | 514 | 23 | 300 | 1.91e-12 | 68.9 |
| MS.gene48297.t1 | MTR_1g034785 | 23.113 | 212 | 141 | 3 | 240 | 429 | 86 | 297 | 2.59e-12 | 69.3 |
| MS.gene48297.t1 | MTR_3g052220 | 22.422 | 223 | 144 | 7 | 280 | 482 | 222 | 435 | 8.03e-12 | 67.8 |
| MS.gene48297.t1 | MTR_3g052220 | 27.108 | 166 | 107 | 4 | 328 | 483 | 227 | 388 | 1.07e-11 | 67.4 |
| MS.gene48297.t1 | MTR_4g125710 | 24.812 | 266 | 169 | 8 | 245 | 489 | 33 | 288 | 8.82e-12 | 66.6 |
| MS.gene48297.t1 | MTR_2g029940 | 23.377 | 231 | 162 | 5 | 245 | 473 | 225 | 442 | 9.00e-12 | 67.8 |
| MS.gene48297.t1 | MTR_7g076230 | 25.243 | 206 | 146 | 4 | 281 | 483 | 378 | 578 | 1.05e-11 | 68.2 |
| MS.gene48297.t1 | MTR_6g005220 | 23.741 | 278 | 172 | 11 | 274 | 513 | 110 | 385 | 1.22e-11 | 67.4 |
| MS.gene48297.t1 | MTR_2g034500 | 24.188 | 277 | 161 | 9 | 225 | 471 | 236 | 493 | 1.71e-11 | 67.8 |
| MS.gene48297.t1 | MTR_4g071130 | 26.394 | 269 | 166 | 12 | 225 | 485 | 46 | 290 | 2.54e-11 | 67.0 |
| MS.gene48297.t1 | MTR_1g044720 | 25.000 | 204 | 147 | 4 | 232 | 431 | 224 | 425 | 4.58e-11 | 65.5 |
| MS.gene48297.t1 | MTR_1g069345 | 24.127 | 315 | 207 | 14 | 217 | 513 | 203 | 503 | 6.36e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48297.t1 | AT5G50230 | 71.203 | 507 | 146 | 0 | 8 | 514 | 3 | 509 | 0.0 | 783 |
| MS.gene48297.t1 | AT5G64730 | 26.490 | 302 | 216 | 4 | 213 | 513 | 1 | 297 | 3.88e-30 | 120 |
| MS.gene48297.t1 | AT3G49660 | 28.682 | 258 | 168 | 5 | 226 | 475 | 67 | 316 | 1.26e-29 | 119 |
| MS.gene48297.t1 | AT3G49660 | 25.581 | 301 | 205 | 6 | 226 | 514 | 20 | 313 | 1.07e-27 | 113 |
| MS.gene48297.t1 | AT2G43770 | 26.838 | 272 | 194 | 2 | 226 | 492 | 49 | 320 | 1.71e-28 | 116 |
| MS.gene48297.t1 | AT2G43770 | 26.923 | 208 | 141 | 5 | 310 | 513 | 49 | 249 | 3.88e-15 | 77.4 |
| MS.gene48297.t1 | AT1G48630 | 26.073 | 303 | 186 | 8 | 241 | 513 | 27 | 321 | 8.26e-22 | 96.7 |
| MS.gene48297.t1 | AT1G48630 | 25.725 | 276 | 172 | 8 | 225 | 475 | 58 | 325 | 4.82e-17 | 82.8 |
| MS.gene48297.t1 | AT1G48630 | 25.455 | 220 | 146 | 7 | 306 | 513 | 7 | 220 | 1.05e-12 | 69.7 |
| MS.gene48297.t1 | AT3G18130 | 26.403 | 303 | 185 | 8 | 241 | 513 | 27 | 321 | 1.40e-21 | 96.3 |
| MS.gene48297.t1 | AT3G18130 | 25.725 | 276 | 172 | 8 | 225 | 475 | 58 | 325 | 7.74e-17 | 82.0 |
| MS.gene48297.t1 | AT3G18130 | 25.000 | 220 | 147 | 7 | 306 | 513 | 7 | 220 | 1.17e-11 | 66.6 |
| MS.gene48297.t1 | AT1G10580 | 24.038 | 312 | 212 | 8 | 218 | 513 | 270 | 572 | 2.33e-21 | 97.8 |
| MS.gene48297.t1 | AT3G16650 | 25.191 | 262 | 175 | 8 | 224 | 477 | 163 | 411 | 9.15e-21 | 95.5 |
| MS.gene48297.t1 | AT5G23430 | 28.111 | 217 | 150 | 4 | 224 | 435 | 7 | 222 | 1.14e-20 | 96.3 |
| MS.gene48297.t1 | AT5G23430 | 25.688 | 218 | 152 | 4 | 285 | 499 | 30 | 240 | 4.80e-16 | 82.0 |
| MS.gene48297.t1 | AT5G23430 | 24.103 | 195 | 146 | 2 | 221 | 414 | 50 | 243 | 9.43e-12 | 68.2 |
| MS.gene48297.t1 | AT5G23430 | 28.111 | 217 | 150 | 4 | 224 | 435 | 7 | 222 | 1.14e-20 | 96.3 |
| MS.gene48297.t1 | AT5G23430 | 25.688 | 218 | 152 | 4 | 285 | 499 | 30 | 240 | 4.80e-16 | 82.0 |
| MS.gene48297.t1 | AT5G23430 | 24.103 | 195 | 146 | 2 | 221 | 414 | 50 | 243 | 9.43e-12 | 68.2 |
| MS.gene48297.t1 | AT5G23430 | 28.111 | 217 | 150 | 4 | 224 | 435 | 7 | 222 | 1.16e-20 | 96.3 |
| MS.gene48297.t1 | AT5G23430 | 25.688 | 218 | 152 | 4 | 285 | 499 | 30 | 240 | 4.72e-16 | 82.0 |
| MS.gene48297.t1 | AT5G23430 | 24.103 | 195 | 146 | 2 | 221 | 414 | 50 | 243 | 9.52e-12 | 68.2 |
| MS.gene48297.t1 | AT1G11160 | 27.165 | 254 | 174 | 6 | 224 | 471 | 6 | 254 | 1.20e-20 | 96.7 |
| MS.gene48297.t1 | AT1G11160 | 23.789 | 227 | 167 | 3 | 284 | 509 | 28 | 249 | 1.59e-13 | 73.9 |
| MS.gene48297.t1 | AT1G11160 | 27.165 | 254 | 174 | 6 | 224 | 471 | 6 | 254 | 1.27e-20 | 96.3 |
| MS.gene48297.t1 | AT1G11160 | 23.789 | 227 | 167 | 3 | 284 | 509 | 28 | 249 | 1.69e-13 | 73.9 |
| MS.gene48297.t1 | AT1G11160 | 27.165 | 254 | 174 | 6 | 224 | 471 | 6 | 254 | 2.05e-20 | 95.9 |
| MS.gene48297.t1 | AT1G11160 | 23.789 | 227 | 167 | 3 | 284 | 509 | 28 | 249 | 2.44e-13 | 73.6 |
| MS.gene48297.t1 | AT1G18080 | 25.484 | 310 | 180 | 9 | 241 | 513 | 27 | 322 | 2.37e-20 | 92.4 |
| MS.gene48297.t1 | AT1G18080 | 28.440 | 218 | 143 | 6 | 306 | 513 | 7 | 221 | 4.99e-15 | 76.6 |
| MS.gene48297.t1 | AT1G18080 | 23.466 | 277 | 178 | 8 | 225 | 475 | 58 | 326 | 9.85e-14 | 72.8 |
| MS.gene48297.t1 | AT5G08390 | 28.571 | 217 | 149 | 4 | 224 | 435 | 7 | 222 | 2.87e-20 | 95.1 |
| MS.gene48297.t1 | AT5G08390 | 24.537 | 216 | 157 | 3 | 285 | 499 | 30 | 240 | 1.79e-15 | 80.1 |
| MS.gene48297.t1 | AT5G08390 | 22.564 | 195 | 149 | 2 | 221 | 414 | 50 | 243 | 5.00e-11 | 65.9 |
| MS.gene48297.t1 | AT5G08390 | 25.974 | 154 | 104 | 3 | 226 | 374 | 97 | 245 | 6.32e-11 | 65.5 |
| MS.gene48297.t1 | AT4G02730 | 25.704 | 284 | 202 | 6 | 214 | 490 | 23 | 304 | 2.75e-19 | 89.4 |
| MS.gene48297.t1 | AT4G02730 | 21.654 | 254 | 186 | 7 | 267 | 513 | 38 | 285 | 1.51e-13 | 72.4 |
| MS.gene48297.t1 | AT4G02730 | 25.907 | 193 | 135 | 4 | 219 | 405 | 117 | 307 | 9.47e-11 | 63.9 |
| MS.gene48297.t1 | AT4G15900 | 23.970 | 267 | 173 | 9 | 224 | 477 | 169 | 418 | 3.44e-19 | 90.9 |
| MS.gene48297.t1 | AT1G04510 | 26.247 | 381 | 235 | 13 | 58 | 431 | 87 | 428 | 5.48e-19 | 90.5 |
| MS.gene48297.t1 | AT1G04510 | 26.247 | 381 | 235 | 13 | 58 | 431 | 87 | 428 | 5.68e-19 | 90.5 |
| MS.gene48297.t1 | AT1G61210 | 26.378 | 254 | 176 | 6 | 224 | 472 | 6 | 253 | 5.11e-18 | 88.2 |
| MS.gene48297.t1 | AT1G61210 | 24.775 | 222 | 155 | 5 | 284 | 501 | 28 | 241 | 3.65e-13 | 72.8 |
| MS.gene48297.t1 | AT5G13480 | 23.469 | 294 | 179 | 4 | 221 | 513 | 167 | 415 | 5.85e-18 | 87.8 |
| MS.gene48297.t1 | AT5G13480 | 23.469 | 294 | 179 | 4 | 221 | 513 | 144 | 392 | 6.82e-18 | 87.4 |
| MS.gene48297.t1 | AT5G13480 | 23.469 | 294 | 179 | 4 | 221 | 513 | 144 | 392 | 8.79e-18 | 87.0 |
| MS.gene48297.t1 | AT5G13480 | 23.469 | 294 | 179 | 4 | 221 | 513 | 156 | 404 | 1.04e-17 | 86.7 |
| MS.gene48297.t1 | AT1G61210 | 26.872 | 227 | 160 | 4 | 224 | 445 | 6 | 231 | 1.08e-17 | 87.4 |
| MS.gene48297.t1 | AT1G61210 | 24.775 | 222 | 155 | 5 | 284 | 501 | 28 | 241 | 7.08e-13 | 72.0 |
| MS.gene48297.t1 | AT1G61210 | 25.157 | 159 | 116 | 3 | 226 | 383 | 96 | 252 | 1.24e-11 | 68.2 |
| MS.gene48297.t1 | AT1G61210 | 26.872 | 227 | 160 | 4 | 224 | 445 | 6 | 231 | 1.20e-17 | 87.0 |
| MS.gene48297.t1 | AT1G61210 | 24.775 | 222 | 155 | 5 | 284 | 501 | 28 | 241 | 7.59e-13 | 72.0 |
| MS.gene48297.t1 | AT1G61210 | 25.157 | 159 | 116 | 3 | 226 | 383 | 96 | 252 | 1.26e-11 | 68.2 |
| MS.gene48297.t1 | AT5G52820 | 22.849 | 337 | 214 | 11 | 219 | 513 | 97 | 429 | 1.46e-17 | 85.9 |
| MS.gene48297.t1 | AT5G52820 | 26.816 | 179 | 111 | 3 | 164 | 342 | 313 | 471 | 1.73e-14 | 76.3 |
| MS.gene48297.t1 | AT2G33340 | 23.758 | 463 | 294 | 16 | 58 | 507 | 87 | 503 | 7.13e-17 | 84.0 |
| MS.gene48297.t1 | AT2G33340 | 23.758 | 463 | 294 | 16 | 58 | 507 | 87 | 503 | 7.13e-17 | 84.0 |
| MS.gene48297.t1 | AT2G33340 | 24.011 | 379 | 243 | 11 | 58 | 430 | 87 | 426 | 1.10e-16 | 83.2 |
| MS.gene48297.t1 | AT5G16750 | 26.038 | 265 | 177 | 6 | 264 | 513 | 350 | 610 | 2.51e-16 | 82.8 |
| MS.gene48297.t1 | AT5G16750 | 26.512 | 215 | 149 | 5 | 254 | 461 | 42 | 254 | 4.68e-15 | 79.0 |
| MS.gene48297.t1 | AT5G16750 | 23.443 | 273 | 175 | 8 | 221 | 471 | 392 | 652 | 1.24e-11 | 67.8 |
| MS.gene48297.t1 | AT1G49040 | 27.306 | 271 | 170 | 12 | 241 | 498 | 866 | 1122 | 8.49e-16 | 81.3 |
| MS.gene48297.t1 | AT1G49040 | 23.616 | 271 | 179 | 8 | 254 | 513 | 836 | 1089 | 6.46e-14 | 75.5 |
| MS.gene48297.t1 | AT1G49040 | 24.862 | 181 | 125 | 6 | 233 | 409 | 944 | 1117 | 1.36e-12 | 71.2 |
| MS.gene48297.t1 | AT3G27640 | 24.911 | 281 | 169 | 8 | 274 | 513 | 130 | 409 | 1.31e-15 | 80.1 |
| MS.gene48297.t1 | AT3G27640 | 24.911 | 281 | 169 | 8 | 274 | 513 | 111 | 390 | 1.41e-15 | 79.7 |
| MS.gene48297.t1 | AT5G43920 | 25.806 | 310 | 208 | 11 | 218 | 513 | 212 | 513 | 1.79e-15 | 79.3 |
| MS.gene48297.t1 | AT1G11160 | 26.087 | 207 | 146 | 4 | 267 | 471 | 11 | 212 | 3.35e-15 | 79.3 |
| MS.gene48297.t1 | AT1G11160 | 28.387 | 155 | 107 | 3 | 226 | 378 | 54 | 206 | 3.99e-14 | 75.9 |
| MS.gene48297.t1 | AT1G11160 | 25.616 | 203 | 145 | 3 | 308 | 509 | 10 | 207 | 4.81e-13 | 72.4 |
| MS.gene48297.t1 | AT5G67320 | 23.264 | 288 | 162 | 5 | 226 | 503 | 361 | 599 | 1.01e-14 | 77.4 |
| MS.gene48297.t1 | AT3G18140 | 24.373 | 279 | 197 | 7 | 245 | 514 | 8 | 281 | 1.18e-14 | 75.1 |
| MS.gene48297.t1 | AT3G18140 | 25.000 | 184 | 122 | 5 | 235 | 406 | 124 | 303 | 8.29e-11 | 63.5 |
| MS.gene48297.t1 | AT4G03020 | 26.104 | 249 | 164 | 6 | 275 | 513 | 232 | 470 | 2.14e-14 | 75.9 |
| MS.gene48297.t1 | AT4G03020 | 26.104 | 249 | 164 | 6 | 275 | 513 | 232 | 470 | 2.14e-14 | 75.9 |
| MS.gene48297.t1 | AT4G03020 | 26.104 | 249 | 164 | 6 | 275 | 513 | 232 | 470 | 2.14e-14 | 75.9 |
| MS.gene48297.t1 | AT3G49180 | 24.645 | 211 | 142 | 3 | 243 | 436 | 91 | 301 | 8.25e-14 | 73.9 |
| MS.gene48297.t1 | AT5G08560 | 23.944 | 284 | 164 | 10 | 278 | 513 | 280 | 559 | 1.05e-13 | 73.9 |
| MS.gene48297.t1 | AT5G08560 | 23.944 | 284 | 164 | 10 | 278 | 513 | 280 | 559 | 1.05e-13 | 73.9 |
| MS.gene48297.t1 | AT5G08560 | 23.944 | 284 | 164 | 10 | 278 | 513 | 280 | 559 | 1.05e-13 | 73.9 |
| MS.gene48297.t1 | AT5G25150 | 26.367 | 311 | 177 | 11 | 218 | 513 | 340 | 613 | 1.30e-13 | 73.9 |
| MS.gene48297.t1 | AT5G25150 | 22.439 | 205 | 157 | 2 | 226 | 429 | 414 | 617 | 5.74e-11 | 65.5 |
| MS.gene48297.t1 | AT5G25150 | 26.367 | 311 | 177 | 11 | 218 | 513 | 340 | 613 | 1.65e-13 | 73.6 |
| MS.gene48297.t1 | AT5G25150 | 22.439 | 205 | 157 | 2 | 226 | 429 | 414 | 617 | 6.99e-11 | 65.5 |
| MS.gene48297.t1 | AT2G47410 | 28.249 | 177 | 109 | 3 | 225 | 383 | 49 | 225 | 1.82e-13 | 73.9 |
| MS.gene48297.t1 | AT2G47410 | 28.249 | 177 | 109 | 3 | 225 | 383 | 231 | 407 | 2.08e-13 | 73.9 |
| MS.gene48297.t1 | AT2G47410 | 28.249 | 177 | 109 | 3 | 225 | 383 | 230 | 406 | 2.17e-13 | 73.6 |
| MS.gene48297.t1 | AT2G21390 | 24.000 | 275 | 172 | 7 | 225 | 468 | 46 | 314 | 1.00e-12 | 71.6 |
| MS.gene48297.t1 | AT2G16405 | 23.308 | 266 | 182 | 7 | 268 | 513 | 212 | 475 | 1.01e-12 | 70.9 |
| MS.gene48297.t1 | AT2G47410 | 26.768 | 198 | 127 | 3 | 225 | 420 | 49 | 230 | 1.05e-12 | 71.6 |
| MS.gene48297.t1 | AT2G47410 | 26.768 | 198 | 127 | 3 | 225 | 420 | 49 | 230 | 1.05e-12 | 71.6 |
| MS.gene48297.t1 | AT2G47410 | 26.768 | 198 | 127 | 3 | 225 | 420 | 231 | 412 | 1.25e-12 | 71.2 |
| MS.gene48297.t1 | AT2G41500 | 23.140 | 242 | 174 | 6 | 277 | 514 | 303 | 536 | 1.29e-12 | 70.5 |
| MS.gene48297.t1 | AT2G41500 | 23.320 | 253 | 182 | 6 | 226 | 474 | 294 | 538 | 1.59e-12 | 70.5 |
| MS.gene48297.t1 | AT2G41500 | 23.140 | 242 | 174 | 6 | 277 | 514 | 303 | 536 | 1.29e-12 | 70.5 |
| MS.gene48297.t1 | AT2G41500 | 23.320 | 253 | 182 | 6 | 226 | 474 | 294 | 538 | 1.59e-12 | 70.5 |
| MS.gene48297.t1 | AT4G29830 | 23.810 | 294 | 195 | 7 | 227 | 498 | 11 | 297 | 1.59e-12 | 68.9 |
| MS.gene48297.t1 | AT2G22040 | 23.693 | 287 | 191 | 9 | 245 | 514 | 13 | 288 | 1.75e-12 | 68.9 |
| MS.gene48297.t1 | AT2G22040 | 25.134 | 187 | 125 | 4 | 235 | 409 | 130 | 313 | 1.97e-12 | 68.6 |
| MS.gene48297.t1 | AT1G71840 | 23.841 | 302 | 208 | 10 | 224 | 513 | 64 | 355 | 2.73e-12 | 68.9 |
| MS.gene48297.t1 | AT3G15610 | 23.810 | 273 | 195 | 7 | 245 | 513 | 34 | 297 | 3.27e-12 | 68.2 |
| MS.gene48297.t1 | AT1G73720 | 24.848 | 165 | 111 | 3 | 328 | 483 | 226 | 386 | 7.48e-12 | 68.2 |
| MS.gene48297.t1 | AT1G73720 | 22.791 | 215 | 152 | 6 | 280 | 482 | 221 | 433 | 1.32e-11 | 67.4 |
| MS.gene48297.t1 | AT2G26490 | 27.203 | 261 | 156 | 13 | 244 | 491 | 146 | 385 | 1.71e-11 | 66.6 |
| MS.gene48297.t1 | AT5G49430 | 26.570 | 207 | 128 | 4 | 225 | 429 | 240 | 424 | 3.71e-11 | 66.6 |
| MS.gene48297.t1 | AT5G49430 | 26.570 | 207 | 128 | 4 | 225 | 429 | 240 | 424 | 3.71e-11 | 66.6 |
| MS.gene48297.t1 | AT5G14530 | 22.727 | 308 | 206 | 10 | 200 | 495 | 8 | 295 | 4.30e-11 | 64.7 |
| MS.gene48297.t1 | AT1G62020 | 22.909 | 275 | 175 | 7 | 225 | 468 | 46 | 314 | 6.06e-11 | 65.9 |
| MS.gene48297.t1 | AT1G52730 | 22.993 | 274 | 196 | 8 | 245 | 513 | 34 | 297 | 7.42e-11 | 64.3 |
| MS.gene48297.t1 | AT1G52730 | 22.993 | 274 | 196 | 8 | 245 | 513 | 34 | 297 | 7.42e-11 | 64.3 |
Find 104 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGTATTATACCTCATTT+AGG | 0.277590 | 8.3:-18078697 | None:intergenic |
| TTAACAGAGTGGCTTCTAAT+TGG | 0.280252 | 8.3:+18080339 | MS.gene48297:CDS |
| TCCTTAAGTTCAAGTCTTAC+TGG | 0.289367 | 8.3:+18079807 | MS.gene48297:CDS |
| ACGACCGTACTATAAAAGTT+TGG | 0.316749 | 8.3:+18080024 | MS.gene48297:CDS |
| CTCTCAATTAAAGACGGATT+TGG | 0.319744 | 8.3:+18078520 | MS.gene48297:CDS |
| CGAGTCCGTCATACCCTTAC+TGG | 0.338442 | 8.3:+18079933 | MS.gene48297:CDS |
| TCAATCGCAACTTGTTCTTT+CGG | 0.343457 | 8.3:-18077413 | None:intergenic |
| TTGTTTCAATCTGGTCATAA+TGG | 0.359886 | 8.3:+18080546 | MS.gene48297:CDS |
| CTTCTGTTCTCTGTTGTAGC+TGG | 0.366870 | 8.3:+18080480 | MS.gene48297:CDS |
| GCAAAGAGCATTGCAGTTGC+TGG | 0.371762 | 8.3:-18080087 | None:intergenic |
| ACAACAACAATGGTGAAAAC+TGG | 0.379287 | 8.3:+18077386 | None:intergenic |
| TCGATGGTAATCTTCGGTTA+TGG | 0.380769 | 8.3:+18080147 | MS.gene48297:CDS |
| ATCGACATGTCCAGAAAATA+TGG | 0.387589 | 8.3:-18080129 | None:intergenic |
| TCAATATCACTTTCTCGAAA+TGG | 0.389236 | 8.3:+18080227 | MS.gene48297:CDS |
| CGACCGTACTATAAAAGTTT+GGG | 0.390463 | 8.3:+18080025 | MS.gene48297:CDS |
| TGGCTGCCTTGGCTCAGTAT+TGG | 0.392787 | 8.3:+18079827 | MS.gene48297:CDS |
| AATTCTAGTAGATTGATTAC+TGG | 0.396540 | 8.3:+18079741 | MS.gene48297:CDS |
| GAAAGAGAAAGCAGAGAACT+TGG | 0.396574 | 8.3:+18078044 | MS.gene48297:CDS |
| TCAAGTCTTACTGGCTGCCT+TGG | 0.397402 | 8.3:+18079816 | MS.gene48297:CDS |
| TTCTAGACCCATCGTTTCTC+AGG | 0.404660 | 8.3:+18077517 | MS.gene48297:CDS |
| AGAATTGTACTCGAACAATA+AGG | 0.407571 | 8.3:-18079724 | None:intergenic |
| CTGATGGATCTGTGCATATA+TGG | 0.413468 | 8.3:+18080411 | MS.gene48297:CDS |
| GGAATGGAATTGTTTCAATC+TGG | 0.416661 | 8.3:+18080537 | MS.gene48297:CDS |
| CGATGGTAATCTTCGGTTAT+GGG | 0.416788 | 8.3:+18080148 | MS.gene48297:CDS |
| TTCAGAACTGAAAACACAAC+TGG | 0.427251 | 8.3:+18078583 | MS.gene48297:CDS |
| AAGACATGGTTCAGCGGCTA+AGG | 0.439770 | 8.3:+18079559 | MS.gene48297:CDS |
| ATTCCTGTCAGCTGAAGCTA+GGG | 0.443091 | 8.3:-18080519 | None:intergenic |
| CTTTATCCGTGTGTCCAGTA+AGG | 0.447371 | 8.3:-18079947 | None:intergenic |
| TTTGTTTGATGTGCGATCTC+TGG | 0.451133 | 8.3:+18080289 | MS.gene48297:CDS |
| GCCAGTAAGACTTGAACTTA+AGG | 0.454568 | 8.3:-18079808 | None:intergenic |
| TCCCTTCCAATTGCAAATAC+AGG | 0.460830 | 8.3:+18079673 | MS.gene48297:CDS |
| GTTGCCGCTGGGTCTGCTGA+TGG | 0.465398 | 8.3:+18080395 | MS.gene48297:CDS |
| CATTCCTGTCAGCTGAAGCT+AGG | 0.467857 | 8.3:-18080520 | None:intergenic |
| AATAACAGATCGATTATCAT+TGG | 0.473031 | 8.3:-18079862 | None:intergenic |
| GCTCTTTGCTTCAGCACAGA+TGG | 0.474209 | 8.3:+18080101 | MS.gene48297:CDS |
| CTAGAAAGTGCGAGAAAAGC+AGG | 0.474966 | 8.3:-18077500 | None:intergenic |
| GACAACAATCATGTTGCCGC+TGG | 0.477287 | 8.3:+18080383 | MS.gene48297:CDS |
| ATTTAGCCTGTATTTGCAAT+TGG | 0.481713 | 8.3:-18079679 | None:intergenic |
| GAAAGCAGAGAACTTGGAAG+TGG | 0.488324 | 8.3:+18078050 | MS.gene48297:CDS |
| AACCCCTAGCTTCAGCTGAC+AGG | 0.489230 | 8.3:+18080516 | MS.gene48297:CDS |
| ATTCTAGTAGATTGATTACT+GGG | 0.491572 | 8.3:+18079742 | MS.gene48297:CDS |
| GCGGCAACATGATTGTTGTC+TGG | 0.492362 | 8.3:-18080380 | None:intergenic |
| TGTTGTAGCTGGAGTGGAAT+GGG | 0.499332 | 8.3:+18080491 | MS.gene48297:CDS |
| AGCCTGTATTTGCAATTGGA+AGG | 0.502314 | 8.3:-18079675 | None:intergenic |
| AAACGCCATCTTCTCGAAGA+AGG | 0.507490 | 8.3:+18077467 | MS.gene48297:CDS |
| GCCTGTATTTGCAATTGGAA+GGG | 0.520159 | 8.3:-18079674 | None:intergenic |
| CATATATGGTCAATATCTAA+AGG | 0.520412 | 8.3:+18080425 | MS.gene48297:CDS |
| GAGCGCCTTCTTCGAGAAGA+TGG | 0.521377 | 8.3:-18077472 | None:intergenic |
| GACATGTCGATGGTAATCTT+CGG | 0.525301 | 8.3:+18080141 | MS.gene48297:CDS |
| AAAGTTTGGGACTTGATGAA+AGG | 0.527945 | 8.3:+18080038 | MS.gene48297:CDS |
| CAAAGAGCATTGCAGTTGCT+GGG | 0.531625 | 8.3:-18080086 | None:intergenic |
| TACTTCCACAACAAGTTGCT+CGG | 0.532958 | 8.3:-18078109 | None:intergenic |
| GTGCAAATTATCCCTTCCAC+TGG | 0.536187 | 8.3:-18080264 | None:intergenic |
| GTTCTCTGTTGTAGCTGGAG+TGG | 0.537003 | 8.3:+18080485 | MS.gene48297:CDS |
| AAAGTGTGGGATACAAATAC+AGG | 0.539323 | 8.3:+18079783 | MS.gene48297:CDS |
| ATTGTTCGTCGAAGTGAAGA+AGG | 0.542555 | 8.3:+18079624 | MS.gene48297:CDS |
| TATGTGTGGGATCTTAGCTC+AGG | 0.543218 | 8.3:+18079909 | MS.gene48297:CDS |
| CTAGCTTCAGCTGACAGGAA+TGG | 0.547140 | 8.3:+18080521 | MS.gene48297:CDS |
| AGAAGGAGTTGACAGAATTG+AGG | 0.554456 | 8.3:+18078193 | MS.gene48297:CDS |
| GTGCGATCTCTGGAAGTTTG+TGG | 0.559305 | 8.3:+18080299 | MS.gene48297:CDS |
| CTTGATGTTAGAAAAGATGA+AGG | 0.562481 | 8.3:+18078664 | MS.gene48297:CDS |
| TGAAATAATCAGTACTCTGA+AGG | 0.562507 | 8.3:+18080448 | MS.gene48297:CDS |
| GTTATCCGAGCAACTTGTTG+TGG | 0.566280 | 8.3:+18078104 | MS.gene48297:CDS |
| CTCAAACAACTTGTATGTGT+GGG | 0.569983 | 8.3:+18079896 | MS.gene48297:CDS |
| GCTCAAACAACTTGTATGTG+TGG | 0.578898 | 8.3:+18079895 | MS.gene48297:CDS |
| CTGTTGTAGCTGGAGTGGAA+TGG | 0.580319 | 8.3:+18080490 | MS.gene48297:CDS |
| AGACATGGTTCAGCGGCTAA+GGG | 0.586487 | 8.3:+18079560 | MS.gene48297:CDS |
| ACAACTTGCAAGGGAACAAG+TGG | 0.587447 | 8.3:+18079596 | MS.gene48297:CDS |
| GTTCAGCGGCTAAGGGCTAG+TGG | 0.589500 | 8.3:+18079567 | MS.gene48297:CDS |
| ATATTGCATTGACCAGTGGA+AGG | 0.590280 | 8.3:+18080252 | MS.gene48297:CDS |
| TGCGATTTCTGATATGCAGA+AGG | 0.591509 | 8.3:+18078176 | MS.gene48297:CDS |
| GGATGCTGAACGCCTAAATG+AGG | 0.592570 | 8.3:+18078685 | MS.gene48297:CDS |
| AATGCTATAAAGCTCAATCT+CGG | 0.592904 | 8.3:+18078082 | MS.gene48297:CDS |
| TACAGGCTAAATGCACATGA+AGG | 0.593778 | 8.3:+18079690 | MS.gene48297:CDS |
| ACAACAATCATGTTGCCGCT+GGG | 0.594947 | 8.3:+18080384 | MS.gene48297:CDS |
| GTGGTCTAGAACAACTTGCA+AGG | 0.596866 | 8.3:+18079586 | MS.gene48297:CDS |
| TTTATCCGTGTGTCCAGTAA+GGG | 0.597962 | 8.3:-18079946 | None:intergenic |
| TATGGGACATTCAGAGTGGA+AGG | 0.603476 | 8.3:+18080165 | MS.gene48297:CDS |
| TTGTGCGGTTGATGTTAGCA+AGG | 0.604078 | 8.3:+18079971 | MS.gene48297:CDS |
| AGGATCGTTCAGTTAAAGTG+TGG | 0.609417 | 8.3:+18079769 | MS.gene48297:CDS |
| GGATCGTTCAGTTAAAGTGT+GGG | 0.613938 | 8.3:+18079770 | MS.gene48297:CDS |
| CTTGCAAGGGAACAAGTGGA+TGG | 0.615284 | 8.3:+18079600 | MS.gene48297:CDS |
| GGAAATATTGCATTGACCAG+TGG | 0.615284 | 8.3:+18080248 | MS.gene48297:CDS |
| TGGTCTAGAACAACTTGCAA+GGG | 0.618737 | 8.3:+18079587 | MS.gene48297:CDS |
| TTCCTGTCAGCTGAAGCTAG+GGG | 0.627368 | 8.3:-18080518 | None:intergenic |
| TATTGCATTGACCAGTGGAA+GGG | 0.632302 | 8.3:+18080253 | MS.gene48297:CDS |
| TCTAGTAGATTGATTACTGG+GGG | 0.632682 | 8.3:+18079744 | MS.gene48297:CDS |
| GGTACGTACCTGAGAAACGA+TGG | 0.636424 | 8.3:-18077525 | None:intergenic |
| TGTGTCCAGTAAGGGTATGA+CGG | 0.638602 | 8.3:-18079938 | None:intergenic |
| TCATACCCTTACTGGACACA+CGG | 0.639635 | 8.3:+18079941 | MS.gene48297:CDS |
| GAGTGGAAGGCTGCTAAGTG+AGG | 0.644822 | 8.3:+18080178 | MS.gene48297:CDS |
| TGAGATCCAATACTGAGCCA+AGG | 0.644864 | 8.3:-18079833 | None:intergenic |
| AGGCTAAATGCACATGAAGG+AGG | 0.648402 | 8.3:+18079693 | MS.gene48297:CDS |
| AGAAAGTGATATTGACGTGA+CGG | 0.650603 | 8.3:-18080219 | None:intergenic |
| TGAGTGCTCTCAATTAAAGA+CGG | 0.653157 | 8.3:+18078514 | MS.gene48297:CDS |
| TATATGAAGACATGGTTCAG+CGG | 0.657419 | 8.3:+18079553 | MS.gene48297:CDS |
| GTACGTACCTGAGAAACGAT+GGG | 0.661026 | 8.3:-18077524 | None:intergenic |
| AAATGCGCTATATGAAGACA+TGG | 0.661275 | 8.3:+18079545 | MS.gene48297:CDS |
| TTCTAGTAGATTGATTACTG+GGG | 0.672008 | 8.3:+18079743 | MS.gene48297:CDS |
| CGGTTATGGGACATTCAGAG+TGG | 0.682375 | 8.3:+18080161 | MS.gene48297:CDS |
| AGATCCATCAGCAGACCCAG+CGG | 0.684840 | 8.3:-18080399 | None:intergenic |
| ACACACGGATAAAGTTTGTG+CGG | 0.689247 | 8.3:+18079956 | MS.gene48297:CDS |
| AGAAGCCACTCTGTTAACTG+TGG | 0.703135 | 8.3:-18080333 | None:intergenic |
| ACGAGCCACAGTTAACAGAG+TGG | 0.730751 | 8.3:+18080328 | MS.gene48297:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACAATTTTCATTTTTTTTA+GGG | + | chr8.3:18077556-18077575 | MS.gene48297:intron | 10.0% |
| !!! | TAACAATTTTCATTTTTTTT+AGG | + | chr8.3:18077555-18077574 | MS.gene48297:intron | 10.0% |
| !! | AAAAACTCTTATAAGTTTAT+AGG | - | chr8.3:18079006-18079025 | None:intergenic | 15.0% |
| !! | AAAGGAAACAATAAAAAAAA+TGG | - | chr8.3:18077616-18077635 | None:intergenic | 15.0% |
| !! | AAATGAAAATTGTTAATGAA+AGG | - | chr8.3:18077550-18077569 | None:intergenic | 15.0% |
| !! | AAATGTATTATTAGTTGAAT+CGG | - | chr8.3:18079510-18079529 | None:intergenic | 15.0% |
| !! | AATGAAAATTGTTAATGAAA+GGG | - | chr8.3:18077549-18077568 | None:intergenic | 15.0% |
| !! | AATTGTATTATACCTCATTT+AGG | - | chr8.3:18078700-18078719 | None:intergenic | 20.0% |
| !! | ATAAAAAAGTTCGATTAAAC+GGG | - | chr8.3:18078840-18078859 | None:intergenic | 20.0% |
| !! | ATGATTGAACTAATTTCTTA+CGG | - | chr8.3:18077648-18077667 | None:intergenic | 20.0% |
| !! | GATAAAAAAGTTCGATTAAA+CGG | - | chr8.3:18078841-18078860 | None:intergenic | 20.0% |
| !! | TTATCACAAACTAAAAATGT+TGG | - | chr8.3:18078453-18078472 | None:intergenic | 20.0% |
| !! | TTTATTGTTTCCTTTATTGT+GGG | + | chr8.3:18077621-18077640 | MS.gene48297:intron | 20.0% |
| !!! | AATTTACCTATTTTTAACTG+TGG | + | chr8.3:18077864-18077883 | MS.gene48297:intron | 20.0% |
| !!! | TTTTATTGTTTCCTTTATTG+TGG | + | chr8.3:18077620-18077639 | MS.gene48297:intron | 20.0% |
| ! | AAATTAATGTTGCAAAATGC+AGG | + | chr8.3:18078489-18078508 | MS.gene48297:intron | 25.0% |
| ! | AACTCATAGTGCATAATATT+TGG | + | chr8.3:18079221-18079240 | MS.gene48297:intron | 25.0% |
| ! | AACTTTCCACAGTTAAAAAT+AGG | - | chr8.3:18077873-18077892 | None:intergenic | 25.0% |
| ! | AAGTTGAAATGAATTTGCAA+TGG | + | chr8.3:18078879-18078898 | MS.gene48297:intron | 25.0% |
| ! | AATAACAGATCGATTATCAT+TGG | - | chr8.3:18079865-18079884 | None:intergenic | 25.0% |
| ! | AATTAATGTTGCAAAATGCA+GGG | + | chr8.3:18078490-18078509 | MS.gene48297:intron | 25.0% |
| ! | AATTCTAGTAGATTGATTAC+TGG | + | chr8.3:18079741-18079760 | MS.gene48297:CDS | 25.0% |
| ! | ATTCTAGTAGATTGATTACT+GGG | + | chr8.3:18079742-18079761 | MS.gene48297:CDS | 25.0% |
| ! | CATATATGGTCAATATCTAA+AGG | + | chr8.3:18080425-18080444 | MS.gene48297:CDS | 25.0% |
| ! | GATGTATTTATGTTGTTGAA+GGG | + | chr8.3:18078012-18078031 | MS.gene48297:intron | 25.0% |
| ! | TAATTCAATGTGATCACATA+TGG | - | chr8.3:18077779-18077798 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+CGG | + | chr8.3:18078329-18078348 | MS.gene48297:intron | 25.0% |
| ! | TGATGTATTTATGTTGTTGA+AGG | + | chr8.3:18078011-18078030 | MS.gene48297:intron | 25.0% |
| ! | TTGTACTAAATAGTGTATCT+TGG | - | chr8.3:18078314-18078333 | None:intergenic | 25.0% |
| !!! | TTTTAACTGTGGAAAGTTAT+TGG | + | chr8.3:18077875-18077894 | MS.gene48297:intron | 25.0% |
| AAAGATAGTTGTTTGACTGT+AGG | + | chr8.3:18078916-18078935 | MS.gene48297:intron | 30.0% | |
| AAGTACATCAAATCCAATGT+TGG | - | chr8.3:18079144-18079163 | None:intergenic | 30.0% | |
| AATACATTTCCCATCTCTTT+AGG | + | chr8.3:18079521-18079540 | MS.gene48297:intron | 30.0% | |
| AATGCTATAAAGCTCAATCT+CGG | + | chr8.3:18078082-18078101 | MS.gene48297:CDS | 30.0% | |
| AGAATTGTACTCGAACAATA+AGG | - | chr8.3:18079727-18079746 | None:intergenic | 30.0% | |
| ATTTAGCCTGTATTTGCAAT+TGG | - | chr8.3:18079682-18079701 | None:intergenic | 30.0% | |
| CTATTCTCAATTGACAACAT+TGG | + | chr8.3:18078408-18078427 | MS.gene48297:intron | 30.0% | |
| CTTGATGTTAGAAAAGATGA+AGG | + | chr8.3:18078664-18078683 | MS.gene48297:CDS | 30.0% | |
| TAGTTCCAAAAGTTGTATAC+TGG | - | chr8.3:18078735-18078754 | None:intergenic | 30.0% | |
| TCAAACAACTATCTTTGACA+AGG | - | chr8.3:18078912-18078931 | None:intergenic | 30.0% | |
| TCAATATCACTTTCTCGAAA+TGG | + | chr8.3:18080227-18080246 | MS.gene48297:CDS | 30.0% | |
| TCACAAACTAAAAATGTTGG+TGG | - | chr8.3:18078450-18078469 | None:intergenic | 30.0% | |
| TGAAATAATCAGTACTCTGA+AGG | + | chr8.3:18080448-18080467 | MS.gene48297:CDS | 30.0% | |
| TTCTAGTAGATTGATTACTG+GGG | + | chr8.3:18079743-18079762 | MS.gene48297:CDS | 30.0% | |
| TTGAGAATAGCACAAAATAG+TGG | - | chr8.3:18078398-18078417 | None:intergenic | 30.0% | |
| ! | ACTACTAAGCACTATTCTTT+TGG | - | chr8.3:18077676-18077695 | None:intergenic | 30.0% |
| ! | AGAACCTTCTGAAAAAATTG+AGG | - | chr8.3:18078960-18078979 | None:intergenic | 30.0% |
| ! | AGTCCCAAACTTTTATAGTA+CGG | - | chr8.3:18080031-18080050 | None:intergenic | 30.0% |
| ! | TAGCTGCTATTTAACAAGAT+TGG | - | chr8.3:18078246-18078265 | None:intergenic | 30.0% |
| ! | TCATCTTTTCTAACATCAAG+CGG | - | chr8.3:18078664-18078683 | None:intergenic | 30.0% |
| !!! | ACTTTTTTATCAGCACTTGA+AGG | + | chr8.3:18078850-18078869 | MS.gene48297:intron | 30.0% |
| !!! | TGTACCTCAATTTTTTCAGA+AGG | + | chr8.3:18078953-18078972 | MS.gene48297:intron | 30.0% |
| AAACTAAGCTTCAACCTTGT+AGG | - | chr8.3:18079077-18079096 | None:intergenic | 35.0% | |
| AAAGTGTGGGATACAAATAC+AGG | + | chr8.3:18079783-18079802 | MS.gene48297:CDS | 35.0% | |
| AAATGCGCTATATGAAGACA+TGG | + | chr8.3:18079545-18079564 | MS.gene48297:CDS | 35.0% | |
| ACGACCGTACTATAAAAGTT+TGG | + | chr8.3:18080024-18080043 | MS.gene48297:CDS | 35.0% | |
| ACTTCTGATTGAATGTGTGT+TGG | + | chr8.3:18077725-18077744 | MS.gene48297:intron | 35.0% | |
| AGAAAGTGATATTGACGTGA+CGG | - | chr8.3:18080222-18080241 | None:intergenic | 35.0% | |
| AGTGTATCTTGGAACTATAG+CGG | - | chr8.3:18078303-18078322 | None:intergenic | 35.0% | |
| ATCGACATGTCCAGAAAATA+TGG | - | chr8.3:18080132-18080151 | None:intergenic | 35.0% | |
| CGACCGTACTATAAAAGTTT+GGG | + | chr8.3:18080025-18080044 | MS.gene48297:CDS | 35.0% | |
| CTCAAACAACTTGTATGTGT+GGG | + | chr8.3:18079896-18079915 | MS.gene48297:CDS | 35.0% | |
| GCTATAGAACTATTGTGTAG+CGG | + | chr8.3:18078360-18078379 | MS.gene48297:intron | 35.0% | |
| GGAATGGAATTGTTTCAATC+TGG | + | chr8.3:18080537-18080556 | MS.gene48297:CDS | 35.0% | |
| TATATGAAGACATGGTTCAG+CGG | + | chr8.3:18079553-18079572 | MS.gene48297:CDS | 35.0% | |
| TCCTTAAGTTCAAGTCTTAC+TGG | + | chr8.3:18079807-18079826 | MS.gene48297:CDS | 35.0% | |
| TCTAGTAGATTGATTACTGG+GGG | + | chr8.3:18079744-18079763 | MS.gene48297:CDS | 35.0% | |
| TCTCAATTGACAACATTGGT+TGG | + | chr8.3:18078412-18078431 | MS.gene48297:intron | 35.0% | |
| TGAGTGCTCTCAATTAAAGA+CGG | + | chr8.3:18078514-18078533 | MS.gene48297:CDS | 35.0% | |
| TGTTGTCAAATAGCGGTTAT+AGG | + | chr8.3:18078336-18078355 | MS.gene48297:intron | 35.0% | |
| TTAACAGAGTGGCTTCTAAT+TGG | + | chr8.3:18080339-18080358 | MS.gene48297:CDS | 35.0% | |
| TTATTTGAGAAGCTCCTACA+AGG | + | chr8.3:18079060-18079079 | MS.gene48297:intron | 35.0% | |
| TTCAGAACTGAAAACACAAC+TGG | + | chr8.3:18078583-18078602 | MS.gene48297:CDS | 35.0% | |
| TTCAGAATGTTGCTCGATAT+TGG | + | chr8.3:18077916-18077935 | MS.gene48297:intron | 35.0% | |
| ! | AAAGTTTGGGACTTGATGAA+AGG | + | chr8.3:18080038-18080057 | MS.gene48297:CDS | 35.0% |
| ! | ATATTTTCTGGACATGTCGA+TGG | + | chr8.3:18080131-18080150 | MS.gene48297:CDS | 35.0% |
| ! | ATTTTCAGCTTCAGCTTCAT+TGG | - | chr8.3:18078627-18078646 | None:intergenic | 35.0% |
| ! | CTATACATTTTCCGTGTGAA+TGG | + | chr8.3:18078767-18078786 | MS.gene48297:intron | 35.0% |
| ! | CTCTCAATTAAAGACGGATT+TGG | + | chr8.3:18078520-18078539 | MS.gene48297:CDS | 35.0% |
| ! | TCAATCGCAACTTGTTCTTT+CGG | - | chr8.3:18077416-18077435 | None:intergenic | 35.0% |
| !! | ATTTTCCGTGTGAATGGATT+TGG | + | chr8.3:18078773-18078792 | MS.gene48297:intron | 35.0% |
| ACACACGGATAAAGTTTGTG+CGG | + | chr8.3:18079956-18079975 | MS.gene48297:CDS | 40.0% | |
| AGAAGGAGTTGACAGAATTG+AGG | + | chr8.3:18078193-18078212 | MS.gene48297:CDS | 40.0% | |
| AGCCTGTATTTGCAATTGGA+AGG | - | chr8.3:18079678-18079697 | None:intergenic | 40.0% | |
| AGGATCGTTCAGTTAAAGTG+TGG | + | chr8.3:18079769-18079788 | MS.gene48297:CDS | 40.0% | |
| ATTGTTCGTCGAAGTGAAGA+AGG | + | chr8.3:18079624-18079643 | MS.gene48297:CDS | 40.0% | |
| CAAAGCCAAATCCATTCACA+CGG | - | chr8.3:18078781-18078800 | None:intergenic | 40.0% | |
| CAAATTCTGCTACGGTATAG+CGG | - | chr8.3:18078274-18078293 | None:intergenic | 40.0% | |
| CAGCAATTTCACACCAACAT+TGG | + | chr8.3:18079128-18079147 | MS.gene48297:intron | 40.0% | |
| CGATGGTAATCTTCGGTTAT+GGG | + | chr8.3:18080148-18080167 | MS.gene48297:CDS | 40.0% | |
| GAAAGAGAAAGCAGAGAACT+TGG | + | chr8.3:18078044-18078063 | MS.gene48297:CDS | 40.0% | |
| GACATGTCGATGGTAATCTT+CGG | + | chr8.3:18080141-18080160 | MS.gene48297:CDS | 40.0% | |
| GCCAGTAAGACTTGAACTTA+AGG | - | chr8.3:18079811-18079830 | None:intergenic | 40.0% | |
| GCCTGTATTTGCAATTGGAA+GGG | - | chr8.3:18079677-18079696 | None:intergenic | 40.0% | |
| GCTCAAACAACTTGTATGTG+TGG | + | chr8.3:18079895-18079914 | MS.gene48297:CDS | 40.0% | |
| GGATCGTTCAGTTAAAGTGT+GGG | + | chr8.3:18079770-18079789 | MS.gene48297:CDS | 40.0% | |
| GGTTTGTCCAAATTCTGCTA+CGG | - | chr8.3:18078282-18078301 | None:intergenic | 40.0% | |
| GTTATTAACTCTTGTAGCGC+CGG | + | chr8.3:18077701-18077720 | MS.gene48297:intron | 40.0% | |
| TACAGGCTAAATGCACATGA+AGG | + | chr8.3:18079690-18079709 | MS.gene48297:CDS | 40.0% | |
| TACTTCCACAACAAGTTGCT+CGG | - | chr8.3:18078112-18078131 | None:intergenic | 40.0% | |
| TCCCTTCCAATTGCAAATAC+AGG | + | chr8.3:18079673-18079692 | MS.gene48297:CDS | 40.0% | |
| TCGATGGTAATCTTCGGTTA+TGG | + | chr8.3:18080147-18080166 | MS.gene48297:CDS | 40.0% | |
| TGCGATTTCTGATATGCAGA+AGG | + | chr8.3:18078176-18078195 | MS.gene48297:CDS | 40.0% | |
| TTCTTACGGACCCACAATAA+AGG | - | chr8.3:18077634-18077653 | None:intergenic | 40.0% | |
| TTGGTTGCTTGGATAGTTGA+TGG | + | chr8.3:18077946-18077965 | MS.gene48297:intron | 40.0% | |
| TTTATCCGTGTGTCCAGTAA+GGG | - | chr8.3:18079949-18079968 | None:intergenic | 40.0% | |
| TTTGGCAAGTTGTGCAATCT+TGG | + | chr8.3:18078797-18078816 | MS.gene48297:intron | 40.0% | |
| TTTGTTTGATGTGCGATCTC+TGG | + | chr8.3:18080289-18080308 | MS.gene48297:CDS | 40.0% | |
| ! | ACACATTCAATCAGAAGTGC+CGG | - | chr8.3:18077723-18077742 | None:intergenic | 40.0% |
| ! | ACATTGGTTGGAACTTGGAA+CGG | + | chr8.3:18078424-18078443 | MS.gene48297:intron | 40.0% |
| ! | ATATTGCATTGACCAGTGGA+AGG | + | chr8.3:18080252-18080271 | MS.gene48297:CDS | 40.0% |
| ! | CTCGTCCAGTATACAACTTT+TGG | + | chr8.3:18078727-18078746 | MS.gene48297:intron | 40.0% |
| ! | CTGATGGATCTGTGCATATA+TGG | + | chr8.3:18080411-18080430 | MS.gene48297:CDS | 40.0% |
| ! | GATGGACAGACCATATTTTC+TGG | + | chr8.3:18080119-18080138 | MS.gene48297:CDS | 40.0% |
| ! | GGAAATATTGCATTGACCAG+TGG | + | chr8.3:18080248-18080267 | MS.gene48297:CDS | 40.0% |
| ! | TATTGCATTGACCAGTGGAA+GGG | + | chr8.3:18080253-18080272 | MS.gene48297:CDS | 40.0% |
| ! | TGACAACATTGGTTGGAACT+TGG | + | chr8.3:18078419-18078438 | MS.gene48297:intron | 40.0% |
| ! | TGGTCTAGAACAACTTGCAA+GGG | + | chr8.3:18079587-18079606 | MS.gene48297:CDS | 40.0% |
| !! | GCTCGATATTGGTGTTAAGT+TGG | + | chr8.3:18077927-18077946 | MS.gene48297:intron | 40.0% |
| !! | GTTCACATCATAGTCTTGTG+AGG | - | chr8.3:18079439-18079458 | None:intergenic | 40.0% |
| !! | TTGGTGTTAAGTTGGTTGCT+TGG | + | chr8.3:18077935-18077954 | MS.gene48297:intron | 40.0% |
| !!! | TGTTGTTGAAGGGTTTTGAG+TGG | + | chr8.3:18078022-18078041 | MS.gene48297:intron | 40.0% |
| AAACGCCATCTTCTCGAAGA+AGG | + | chr8.3:18077467-18077486 | MS.gene48297:CDS | 45.0% | |
| ACAACAATCATGTTGCCGCT+GGG | + | chr8.3:18080384-18080403 | MS.gene48297:CDS | 45.0% | |
| ACAACTTGCAAGGGAACAAG+TGG | + | chr8.3:18079596-18079615 | MS.gene48297:CDS | 45.0% | |
| AGAAGCCACTCTGTTAACTG+TGG | - | chr8.3:18080336-18080355 | None:intergenic | 45.0% | |
| AGCGCATTTGCCTAAAGAGA+TGG | - | chr8.3:18079534-18079553 | None:intergenic | 45.0% | |
| AGGCTAAATGCACATGAAGG+AGG | + | chr8.3:18079693-18079712 | MS.gene48297:CDS | 45.0% | |
| AGGTAAATGACACTTGCCAG+TGG | - | chr8.3:18079105-18079124 | None:intergenic | 45.0% | |
| ATTCCTGTCAGCTGAAGCTA+GGG | - | chr8.3:18080522-18080541 | None:intergenic | 45.0% | |
| CGCTATACCGTAGCAGAATT+TGG | + | chr8.3:18078272-18078291 | MS.gene48297:intron | 45.0% | |
| CTTCTGTTCTCTGTTGTAGC+TGG | + | chr8.3:18080480-18080499 | MS.gene48297:CDS | 45.0% | |
| CTTTATCCGTGTGTCCAGTA+AGG | - | chr8.3:18079950-18079969 | None:intergenic | 45.0% | |
| GAAAGCAGAGAACTTGGAAG+TGG | + | chr8.3:18078050-18078069 | MS.gene48297:CDS | 45.0% | |
| GCGCATTTGCCTAAAGAGAT+GGG | - | chr8.3:18079533-18079552 | None:intergenic | 45.0% | |
| GTACGTACCTGAGAAACGAT+GGG | - | chr8.3:18077527-18077546 | None:intergenic | 45.0% | |
| GTGCAAATTATCCCTTCCAC+TGG | - | chr8.3:18080267-18080286 | None:intergenic | 45.0% | |
| GTTCACAACACAGTCTCGTT+AGG | - | chr8.3:18079295-18079314 | None:intergenic | 45.0% | |
| TAGATTGATTACTGGGGGAC+AGG | + | chr8.3:18079749-18079768 | MS.gene48297:CDS | 45.0% | |
| TATGGGACATTCAGAGTGGA+AGG | + | chr8.3:18080165-18080184 | MS.gene48297:CDS | 45.0% | |
| TATGTGTGGGATCTTAGCTC+AGG | + | chr8.3:18079909-18079928 | MS.gene48297:CDS | 45.0% | |
| TCATACCCTTACTGGACACA+CGG | + | chr8.3:18079941-18079960 | MS.gene48297:CDS | 45.0% | |
| TGAGATCCAATACTGAGCCA+AGG | - | chr8.3:18079836-18079855 | None:intergenic | 45.0% | |
| TGTTGTAGCTGGAGTGGAAT+GGG | + | chr8.3:18080491-18080510 | MS.gene48297:CDS | 45.0% | |
| TTCTAGACCCATCGTTTCTC+AGG | + | chr8.3:18077517-18077536 | MS.gene48297:CDS | 45.0% | |
| TTGGTGTGAAATTGCTGAGC+AGG | - | chr8.3:18079125-18079144 | None:intergenic | 45.0% | |
| ! | CGTGTGAATGGATTTGGCTT+TGG | + | chr8.3:18078779-18078798 | MS.gene48297:intron | 45.0% |
| ! | CTAGAAAGTGCGAGAAAAGC+AGG | - | chr8.3:18077503-18077522 | None:intergenic | 45.0% |
| ! | GTGGTCTAGAACAACTTGCA+AGG | + | chr8.3:18079586-18079605 | MS.gene48297:CDS | 45.0% |
| ! | TGTGTCCAGTAAGGGTATGA+CGG | - | chr8.3:18079941-18079960 | None:intergenic | 45.0% |
| ! | TGTTGGTGTCTGACATGTGT+CGG | + | chr8.3:18077742-18077761 | MS.gene48297:intron | 45.0% |
| ! | TTGTGCGGTTGATGTTAGCA+AGG | + | chr8.3:18079971-18079990 | MS.gene48297:CDS | 45.0% |
| !! | CAAAGAGCATTGCAGTTGCT+GGG | - | chr8.3:18080089-18080108 | None:intergenic | 45.0% |
| !! | GTTATCCGAGCAACTTGTTG+TGG | + | chr8.3:18078104-18078123 | MS.gene48297:CDS | 45.0% |
| AAATGACACTTGCCAGTGGC+AGG | - | chr8.3:18079101-18079120 | None:intergenic | 50.0% | |
| AAGACATGGTTCAGCGGCTA+AGG | + | chr8.3:18079559-18079578 | MS.gene48297:CDS | 50.0% | |
| ACGAGCCACAGTTAACAGAG+TGG | + | chr8.3:18080328-18080347 | MS.gene48297:CDS | 50.0% | |
| AGACATGGTTCAGCGGCTAA+GGG | + | chr8.3:18079560-18079579 | MS.gene48297:CDS | 50.0% | |
| CATTCCTGTCAGCTGAAGCT+AGG | - | chr8.3:18080523-18080542 | None:intergenic | 50.0% | |
| CGGTTATGGGACATTCAGAG+TGG | + | chr8.3:18080161-18080180 | MS.gene48297:CDS | 50.0% | |
| CTAGCTTCAGCTGACAGGAA+TGG | + | chr8.3:18080521-18080540 | MS.gene48297:CDS | 50.0% | |
| CTGTTGTAGCTGGAGTGGAA+TGG | + | chr8.3:18080490-18080509 | MS.gene48297:CDS | 50.0% | |
| CTTGCAAGGGAACAAGTGGA+TGG | + | chr8.3:18079600-18079619 | MS.gene48297:CDS | 50.0% | |
| GACAACAATCATGTTGCCGC+TGG | + | chr8.3:18080383-18080402 | MS.gene48297:CDS | 50.0% | |
| GCGGCAACATGATTGTTGTC+TGG | - | chr8.3:18080383-18080402 | None:intergenic | 50.0% | |
| GCTCTTTGCTTCAGCACAGA+TGG | + | chr8.3:18080101-18080120 | MS.gene48297:CDS | 50.0% | |
| GGATGCTGAACGCCTAAATG+AGG | + | chr8.3:18078685-18078704 | MS.gene48297:CDS | 50.0% | |
| GGCAAGTTGTGCAATCTTGG+TGG | + | chr8.3:18078800-18078819 | MS.gene48297:intron | 50.0% | |
| GGTACGTACCTGAGAAACGA+TGG | - | chr8.3:18077528-18077547 | None:intergenic | 50.0% | |
| GTTCTCTGTTGTAGCTGGAG+TGG | + | chr8.3:18080485-18080504 | MS.gene48297:CDS | 50.0% | |
| TTCCTGTCAGCTGAAGCTAG+GGG | - | chr8.3:18080521-18080540 | None:intergenic | 50.0% | |
| ! | GTGCGATCTCTGGAAGTTTG+TGG | + | chr8.3:18080299-18080318 | MS.gene48297:CDS | 50.0% |
| ! | TCAAGTCTTACTGGCTGCCT+TGG | + | chr8.3:18079816-18079835 | MS.gene48297:CDS | 50.0% |
| !! | AAGCTTAGTTTGCCTGCCAC+TGG | + | chr8.3:18079086-18079105 | MS.gene48297:intron | 50.0% |
| !! | GCAAAGAGCATTGCAGTTGC+TGG | - | chr8.3:18080090-18080109 | None:intergenic | 50.0% |
| AACCCCTAGCTTCAGCTGAC+AGG | + | chr8.3:18080516-18080535 | MS.gene48297:CDS | 55.0% | |
| AGATCCATCAGCAGACCCAG+CGG | - | chr8.3:18080402-18080421 | None:intergenic | 55.0% | |
| CGAGTCCGTCATACCCTTAC+TGG | + | chr8.3:18079933-18079952 | MS.gene48297:CDS | 55.0% | |
| GAGCGCCTTCTTCGAGAAGA+TGG | - | chr8.3:18077475-18077494 | None:intergenic | 55.0% | |
| GAGTGGAAGGCTGCTAAGTG+AGG | + | chr8.3:18080178-18080197 | MS.gene48297:CDS | 55.0% | |
| TGGCTGCCTTGGCTCAGTAT+TGG | + | chr8.3:18079827-18079846 | MS.gene48297:CDS | 55.0% | |
| GTTCAGCGGCTAAGGGCTAG+TGG | + | chr8.3:18079567-18079586 | MS.gene48297:CDS | 60.0% | |
| GTTGCCGCTGGGTCTGCTGA+TGG | + | chr8.3:18080395-18080414 | MS.gene48297:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 18077395 | 18080565 | 18077395 | ID=MS.gene48297 |
| chr8.3 | mRNA | 18077395 | 18080565 | 18077395 | ID=MS.gene48297.t1;Parent=MS.gene48297 |
| chr8.3 | exon | 18077395 | 18077538 | 18077395 | ID=MS.gene48297.t1.exon1;Parent=MS.gene48297.t1 |
| chr8.3 | CDS | 18077395 | 18077538 | 18077395 | ID=cds.MS.gene48297.t1;Parent=MS.gene48297.t1 |
| chr8.3 | exon | 18078033 | 18078214 | 18078033 | ID=MS.gene48297.t1.exon2;Parent=MS.gene48297.t1 |
| chr8.3 | CDS | 18078033 | 18078214 | 18078033 | ID=cds.MS.gene48297.t1;Parent=MS.gene48297.t1 |
| chr8.3 | exon | 18078511 | 18078706 | 18078511 | ID=MS.gene48297.t1.exon3;Parent=MS.gene48297.t1 |
| chr8.3 | CDS | 18078511 | 18078706 | 18078511 | ID=cds.MS.gene48297.t1;Parent=MS.gene48297.t1 |
| chr8.3 | exon | 18079543 | 18080565 | 18079543 | ID=MS.gene48297.t1.exon4;Parent=MS.gene48297.t1 |
| chr8.3 | CDS | 18079543 | 18080565 | 18079543 | ID=cds.MS.gene48297.t1;Parent=MS.gene48297.t1 |
| Gene Sequence |
| Protein sequence |
