Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071429.t1 | ABD32840.1 | 96.4 | 333 | 7 | 1 | 1 | 328 | 22 | 354 | 2.40E-193 | 684.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071429.t1 | Q93VC9 | 76.0 | 317 | 76 | 0 | 8 | 324 | 39 | 355 | 7.3e-154 | 544.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071429.t1 | B7FJ05 | 96.4 | 333 | 7 | 1 | 1 | 328 | 24 | 356 | 1.8e-193 | 684.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072617 | MS.gene071429 | PPI |
| MS.gene071429 | MS.gene072616 | PPI |
| MS.gene072618 | MS.gene071429 | PPI |
| MS.gene071429 | MS.gene22772 | PPI |
| MS.gene071430 | MS.gene071429 | PPI |
| MS.gene050819 | MS.gene071429 | PPI |
| MS.gene28614 | MS.gene071429 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071429.t1 | MTR_7g111060 | 96.396 | 333 | 7 | 1 | 1 | 328 | 24 | 356 | 0.0 | 673 |
| MS.gene071429.t1 | MTR_7g111050 | 87.915 | 331 | 36 | 1 | 1 | 327 | 22 | 352 | 0.0 | 617 |
| MS.gene071429.t1 | MTR_7g111050 | 86.786 | 280 | 33 | 1 | 1 | 276 | 17 | 296 | 0.0 | 518 |
| MS.gene071429.t1 | MTR_4g125300 | 32.975 | 279 | 152 | 9 | 30 | 302 | 91 | 340 | 4.35e-34 | 128 |
| MS.gene071429.t1 | MTR_4g094918 | 29.091 | 275 | 162 | 11 | 38 | 302 | 82 | 333 | 1.99e-26 | 107 |
| MS.gene071429.t1 | MTR_7g079230 | 29.344 | 259 | 152 | 6 | 65 | 317 | 107 | 340 | 1.04e-25 | 105 |
| MS.gene071429.t1 | MTR_7g078600 | 31.140 | 228 | 128 | 6 | 81 | 302 | 125 | 329 | 4.77e-25 | 103 |
| MS.gene071429.t1 | MTR_3g075390 | 27.941 | 272 | 168 | 9 | 38 | 302 | 86 | 336 | 5.81e-25 | 103 |
| MS.gene071429.t1 | MTR_2g015850 | 28.148 | 270 | 165 | 8 | 38 | 302 | 110 | 355 | 2.01e-24 | 102 |
| MS.gene071429.t1 | MTR_1g023210 | 28.025 | 314 | 179 | 13 | 10 | 307 | 75 | 357 | 6.26e-24 | 100 |
| MS.gene071429.t1 | MTR_4g071060 | 29.371 | 286 | 159 | 12 | 38 | 307 | 95 | 353 | 1.95e-23 | 99.4 |
| MS.gene071429.t1 | MTR_4g107930 | 28.400 | 250 | 145 | 9 | 61 | 302 | 113 | 336 | 5.14e-23 | 98.2 |
| MS.gene071429.t1 | MTR_4g104370 | 27.354 | 223 | 136 | 7 | 85 | 302 | 134 | 335 | 6.07e-23 | 98.2 |
| MS.gene071429.t1 | MTR_3g102220 | 28.315 | 279 | 159 | 12 | 38 | 302 | 102 | 353 | 6.58e-23 | 99.4 |
| MS.gene071429.t1 | MTR_2g083930 | 28.253 | 269 | 160 | 7 | 40 | 302 | 94 | 335 | 7.55e-23 | 97.4 |
| MS.gene071429.t1 | MTR_1g107550 | 28.125 | 288 | 172 | 12 | 38 | 315 | 98 | 360 | 7.56e-23 | 99.0 |
| MS.gene071429.t1 | MTR_4g047610 | 28.112 | 249 | 147 | 8 | 61 | 302 | 111 | 334 | 9.65e-23 | 97.4 |
| MS.gene071429.t1 | MTR_5g022560 | 27.711 | 249 | 148 | 8 | 61 | 302 | 112 | 335 | 1.47e-22 | 96.7 |
| MS.gene071429.t1 | MTR_2g090890 | 26.786 | 280 | 169 | 10 | 35 | 307 | 83 | 333 | 2.08e-22 | 96.3 |
| MS.gene071429.t1 | MTR_4g079470 | 29.333 | 225 | 131 | 7 | 85 | 302 | 133 | 336 | 2.12e-22 | 96.3 |
| MS.gene071429.t1 | MTR_4g079770 | 29.333 | 225 | 131 | 7 | 85 | 302 | 133 | 336 | 3.38e-22 | 95.9 |
| MS.gene071429.t1 | MTR_4g079440 | 28.205 | 273 | 161 | 9 | 41 | 302 | 88 | 336 | 1.07e-21 | 94.4 |
| MS.gene071429.t1 | MTR_2g015920 | 30.932 | 236 | 133 | 8 | 68 | 299 | 134 | 343 | 1.20e-21 | 94.7 |
| MS.gene071429.t1 | MTR_4g079800 | 28.194 | 227 | 131 | 7 | 85 | 302 | 133 | 336 | 2.44e-21 | 93.2 |
| MS.gene071429.t1 | MTR_4g080730 | 27.473 | 273 | 165 | 10 | 39 | 305 | 89 | 334 | 4.67e-21 | 92.4 |
| MS.gene071429.t1 | MTR_4g080700 | 27.473 | 273 | 165 | 10 | 39 | 305 | 89 | 334 | 5.92e-21 | 92.0 |
| MS.gene071429.t1 | MTR_4g080360 | 29.694 | 229 | 132 | 8 | 81 | 302 | 127 | 333 | 7.53e-21 | 92.0 |
| MS.gene071429.t1 | MTR_3g116080 | 28.413 | 271 | 161 | 12 | 39 | 302 | 95 | 339 | 7.74e-20 | 89.4 |
| MS.gene071429.t1 | MTR_1g018840 | 28.470 | 281 | 156 | 13 | 38 | 302 | 102 | 353 | 1.35e-19 | 89.7 |
| MS.gene071429.t1 | MTR_1g018840 | 28.470 | 281 | 156 | 13 | 38 | 302 | 102 | 353 | 1.79e-19 | 89.0 |
| MS.gene071429.t1 | MTR_2g067900 | 25.796 | 314 | 193 | 11 | 3 | 302 | 30 | 317 | 2.00e-18 | 84.7 |
| MS.gene071429.t1 | MTR_1g023810 | 28.000 | 250 | 146 | 10 | 60 | 302 | 33 | 255 | 1.19e-16 | 79.0 |
| MS.gene071429.t1 | MTR_2g075830 | 29.075 | 227 | 129 | 7 | 85 | 302 | 129 | 332 | 1.54e-16 | 79.7 |
| MS.gene071429.t1 | MTR_2g064475 | 28.444 | 225 | 119 | 11 | 82 | 295 | 138 | 331 | 3.56e-16 | 78.6 |
| MS.gene071429.t1 | MTR_2g015930 | 29.412 | 221 | 125 | 8 | 85 | 299 | 148 | 343 | 4.34e-16 | 78.6 |
| MS.gene071429.t1 | MTR_1g094135 | 27.778 | 252 | 140 | 10 | 75 | 310 | 141 | 366 | 1.19e-15 | 77.4 |
| MS.gene071429.t1 | MTR_2g015840 | 40.909 | 88 | 50 | 2 | 214 | 301 | 173 | 258 | 1.40e-14 | 73.2 |
| MS.gene071429.t1 | MTR_7g079130 | 41.463 | 82 | 42 | 3 | 226 | 302 | 9 | 89 | 1.39e-13 | 66.2 |
| MS.gene071429.t1 | MTR_7g078580 | 36.957 | 92 | 49 | 3 | 217 | 302 | 5 | 93 | 1.81e-12 | 63.9 |
| MS.gene071429.t1 | MTR_8g086470 | 27.273 | 231 | 130 | 10 | 75 | 299 | 141 | 339 | 1.96e-11 | 64.7 |
| MS.gene071429.t1 | MTR_4g065077 | 27.273 | 231 | 130 | 10 | 75 | 299 | 141 | 339 | 2.17e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071429.t1 | AT1G02305 | 75.155 | 322 | 80 | 0 | 3 | 324 | 34 | 355 | 0.0 | 533 |
| MS.gene071429.t1 | AT4G01610 | 75.633 | 316 | 77 | 0 | 3 | 318 | 31 | 346 | 0.0 | 522 |
| MS.gene071429.t1 | AT4G01610 | 75.000 | 316 | 79 | 0 | 3 | 318 | 31 | 346 | 0.0 | 516 |
| MS.gene071429.t1 | AT1G02300 | 66.472 | 343 | 95 | 1 | 2 | 324 | 30 | 372 | 1.81e-174 | 489 |
| MS.gene071429.t1 | AT5G60360 | 32.103 | 271 | 150 | 10 | 38 | 302 | 106 | 348 | 3.03e-29 | 115 |
| MS.gene071429.t1 | AT3G45310 | 32.117 | 274 | 146 | 10 | 38 | 302 | 106 | 348 | 3.16e-29 | 115 |
| MS.gene071429.t1 | AT3G19400 | 29.126 | 309 | 182 | 12 | 24 | 320 | 79 | 362 | 6.44e-29 | 114 |
| MS.gene071429.t1 | AT5G60360 | 30.333 | 300 | 173 | 12 | 9 | 301 | 77 | 347 | 3.98e-28 | 112 |
| MS.gene071429.t1 | AT3G45310 | 31.985 | 272 | 145 | 10 | 38 | 300 | 106 | 346 | 4.78e-28 | 112 |
| MS.gene071429.t1 | AT5G60360 | 31.599 | 269 | 150 | 10 | 38 | 300 | 106 | 346 | 1.10e-27 | 111 |
| MS.gene071429.t1 | AT3G43960 | 28.417 | 278 | 175 | 9 | 24 | 299 | 76 | 331 | 1.99e-26 | 108 |
| MS.gene071429.t1 | AT4G36880 | 28.276 | 290 | 177 | 10 | 38 | 318 | 102 | 369 | 6.24e-26 | 106 |
| MS.gene071429.t1 | AT3G19390 | 28.622 | 283 | 169 | 11 | 27 | 302 | 81 | 337 | 1.07e-24 | 104 |
| MS.gene071429.t1 | AT1G29080 | 28.333 | 300 | 180 | 10 | 5 | 295 | 53 | 326 | 6.03e-24 | 100 |
| MS.gene071429.t1 | AT4G23520 | 30.657 | 274 | 154 | 12 | 38 | 302 | 95 | 341 | 7.91e-24 | 100 |
| MS.gene071429.t1 | AT3G48340 | 27.698 | 278 | 162 | 11 | 38 | 302 | 84 | 335 | 1.96e-23 | 99.4 |
| MS.gene071429.t1 | AT5G43060 | 29.197 | 274 | 156 | 13 | 38 | 302 | 101 | 345 | 4.17e-22 | 97.1 |
| MS.gene071429.t1 | AT3G49340 | 27.305 | 282 | 175 | 9 | 19 | 295 | 65 | 321 | 1.14e-21 | 94.4 |
| MS.gene071429.t1 | AT1G09850 | 27.508 | 309 | 186 | 13 | 4 | 302 | 45 | 325 | 1.38e-21 | 95.1 |
| MS.gene071429.t1 | AT1G47128 | 26.909 | 275 | 162 | 11 | 38 | 302 | 99 | 344 | 1.51e-21 | 95.1 |
| MS.gene071429.t1 | AT4G39090 | 28.472 | 288 | 160 | 12 | 38 | 307 | 98 | 357 | 2.23e-21 | 94.0 |
| MS.gene071429.t1 | AT2G21430 | 28.669 | 293 | 165 | 12 | 38 | 313 | 95 | 360 | 3.69e-21 | 93.2 |
| MS.gene071429.t1 | AT5G50260 | 25.436 | 287 | 178 | 10 | 38 | 313 | 84 | 345 | 4.95e-21 | 92.8 |
| MS.gene071429.t1 | AT4G35350 | 28.417 | 278 | 153 | 12 | 39 | 302 | 99 | 344 | 5.75e-21 | 92.4 |
| MS.gene071429.t1 | AT4G16190 | 28.819 | 288 | 161 | 11 | 38 | 307 | 102 | 363 | 1.96e-20 | 91.3 |
| MS.gene071429.t1 | AT2G34080 | 30.986 | 213 | 122 | 6 | 85 | 295 | 136 | 325 | 2.43e-20 | 90.5 |
| MS.gene071429.t1 | AT1G20850 | 27.839 | 273 | 162 | 12 | 39 | 302 | 99 | 345 | 8.37e-20 | 89.4 |
| MS.gene071429.t1 | AT3G48350 | 24.749 | 299 | 184 | 11 | 38 | 319 | 84 | 358 | 9.40e-20 | 89.4 |
| MS.gene071429.t1 | AT2G27420 | 26.667 | 300 | 191 | 10 | 5 | 295 | 49 | 328 | 1.18e-19 | 88.6 |
| MS.gene071429.t1 | AT1G06260 | 27.574 | 272 | 163 | 10 | 38 | 302 | 90 | 334 | 3.32e-19 | 87.4 |
| MS.gene071429.t1 | AT1G29090 | 25.667 | 300 | 189 | 10 | 5 | 295 | 61 | 335 | 2.46e-18 | 85.1 |
| MS.gene071429.t1 | AT4G11310 | 26.619 | 278 | 160 | 11 | 39 | 302 | 97 | 344 | 6.44e-18 | 84.0 |
| MS.gene071429.t1 | AT5G45890 | 25.949 | 316 | 189 | 13 | 4 | 302 | 50 | 337 | 6.49e-18 | 83.6 |
| MS.gene071429.t1 | AT4G11320 | 25.231 | 325 | 173 | 14 | 4 | 302 | 71 | 351 | 2.47e-17 | 82.4 |
| MS.gene071429.t1 | AT4G11320 | 25.231 | 325 | 173 | 14 | 4 | 302 | 71 | 351 | 2.47e-17 | 82.4 |
| MS.gene071429.t1 | AT3G54940 | 28.000 | 250 | 138 | 11 | 75 | 308 | 137 | 360 | 1.16e-16 | 80.5 |
| MS.gene071429.t1 | AT3G19400 | 31.973 | 147 | 93 | 4 | 24 | 168 | 79 | 220 | 5.40e-14 | 71.6 |
Find 0 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAATTAACAAAAAATATT+TGG | + | 50562:10447-10466 | MS.gene071429:intron | 10.0% |
| !!! | GATTTTAATTCTTATTATTT+TGG | + | 50562:6612-6631 | MS.gene071429:intron | 10.0% |
| !! | TACAACTCTTAATAAAATTA+AGG | - | 50562:7338-7357 | MS.gene071429:intergenic | 15.0% |
| !! | TATTCAAAAAAATAAGAAGA+AGG | - | 50562:7839-7858 | MS.gene071429:intergenic | 15.0% |
| !!! | ACTTTAAAGAAAGAAAAAAA+TGG | - | 50562:6571-6590 | MS.gene071429:intergenic | 15.0% |
| !!! | CTTTCTATTTTTATGATTTT+GGG | + | 50562:7011-7030 | MS.gene071429:intron | 15.0% |
| !!! | TCTTTCTATTTTTATGATTT+TGG | + | 50562:7010-7029 | MS.gene071429:intron | 15.0% |
| !!! | TTTTTTTTTCTAATCATGTT+AGG | - | 50562:6829-6848 | MS.gene071429:intergenic | 15.0% |
| !! | AAAAGTGATAGAAAAATGAA+AGG | - | 50562:6475-6494 | MS.gene071429:intergenic | 20.0% |
| !! | AAAATCATTAAAATTGCCAA+AGG | + | 50562:7745-7764 | MS.gene071429:CDS | 20.0% |
| !! | AAAATTAAGGAAAATAACCT+AGG | - | 50562:7325-7344 | MS.gene071429:intergenic | 20.0% |
| !! | AAAATTTAATTGCAAAAGGA+TGG | - | 50562:8988-9007 | MS.gene071429:intergenic | 20.0% |
| !! | AAAGTGATAGAAAAATGAAA+GGG | - | 50562:6474-6493 | MS.gene071429:intergenic | 20.0% |
| !! | AAATGAAAGGGTTATATATT+TGG | - | 50562:6462-6481 | MS.gene071429:intergenic | 20.0% |
| !! | AAATTAAGGAAAATAACCTA+GGG | - | 50562:7324-7343 | MS.gene071429:intergenic | 20.0% |
| !! | AAATTTAATTGCAAAAGGAT+GGG | - | 50562:8987-9006 | MS.gene071429:intergenic | 20.0% |
| !! | AACTAATATAGAAATTGTGT+CGG | - | 50562:7496-7515 | MS.gene071429:intergenic | 20.0% |
| !! | ATCAAAAATATCAAATGTGT+TGG | - | 50562:6860-6879 | MS.gene071429:intergenic | 20.0% |
| !! | ATTAAGCTTCATTAATAGAA+GGG | + | 50562:8357-8376 | MS.gene071429:intron | 20.0% |
| !! | GAAAGAAAGAAAGAAAAAAT+TGG | - | 50562:6967-6986 | MS.gene071429:intergenic | 20.0% |
| !! | GTCTTAAAAATTTGACTATA+AGG | - | 50562:9042-9061 | MS.gene071429:intergenic | 20.0% |
| !! | TAAAAATTTGACTATAAGGA+AGG | - | 50562:9038-9057 | MS.gene071429:intergenic | 20.0% |
| !! | TCAAAAATATCAAATGTGTT+GGG | - | 50562:6859-6878 | MS.gene071429:intergenic | 20.0% |
| !! | TCTTAACTATAAATCATTTC+AGG | + | 50562:9128-9147 | MS.gene071429:intron | 20.0% |
| !! | TTAGTTAAGGAAACAAAAAA+AGG | + | 50562:7113-7132 | MS.gene071429:intron | 20.0% |
| !!! | AAATCATTTTTGCTCATATT+TGG | - | 50562:6744-6763 | MS.gene071429:intergenic | 20.0% |
| !!! | AATAACAACTAGTTTAGTTA+AGG | + | 50562:7100-7119 | MS.gene071429:intron | 20.0% |
| !!! | AATAAGTACTGTTTTACTTT+AGG | - | 50562:10241-10260 | MS.gene071429:intergenic | 20.0% |
| !!! | AATCAAGTTTTAGTATACAT+AGG | - | 50562:6596-6615 | MS.gene071429:intergenic | 20.0% |
| !!! | ATCAAGTATTAAAAAGTGTA+AGG | - | 50562:7194-7213 | MS.gene071429:intergenic | 20.0% |
| !!! | GAATTATTCTTCATTTTGAA+TGG | + | 50562:10785-10804 | MS.gene071429:intron | 20.0% |
| !!! | GATATCTAATTTGTAATACA+AGG | + | 50562:9480-9499 | MS.gene071429:intron | 20.0% |
| !!! | TTTGACTTTTTTTTTTTGAG+AGG | - | 50562:6786-6805 | MS.gene071429:intergenic | 20.0% |
| !!! | TTTGGCAATTTTAATGATTT+TGG | - | 50562:7746-7765 | MS.gene071429:intergenic | 20.0% |
| ! | AAAGAAAAATAGCTGAAATG+AGG | - | 50562:7966-7985 | MS.gene071429:intergenic | 25.0% |
| ! | AAAGTGAGATACACTTTAAA+AGG | - | 50562:7574-7593 | MS.gene071429:intergenic | 25.0% |
| ! | AAATCAGTGGAATACAAATT+GGG | + | 50562:10746-10765 | MS.gene071429:CDS | 25.0% |
| ! | AGTAGTCTTCTATAAATCAT+AGG | + | 50562:10369-10388 | MS.gene071429:intron | 25.0% |
| ! | ATCCAATTTGATCAAAGTAT+GGG | - | 50562:8756-8775 | MS.gene071429:intergenic | 25.0% |
| ! | ATCTTCAAAATTCCAATGTA+AGG | - | 50562:9217-9236 | MS.gene071429:intergenic | 25.0% |
| ! | CAGTTAAATCTAGCAAAAAT+AGG | + | 50562:9600-9619 | MS.gene071429:intron | 25.0% |
| ! | CATTAAGCTTCATTAATAGA+AGG | + | 50562:8356-8375 | MS.gene071429:intron | 25.0% |
| ! | CTTCTATCAATACTTGATAA+AGG | - | 50562:9284-9303 | MS.gene071429:intergenic | 25.0% |
| ! | GCAGAAAATTTAATTGCAAA+AGG | - | 50562:8992-9011 | MS.gene071429:intergenic | 25.0% |
| ! | TAAGTATAGTGAGAATTTCT+TGG | - | 50562:7286-7305 | MS.gene071429:intergenic | 25.0% |
| ! | TCAATGATAAAGTCTTACTT+TGG | + | 50562:9528-9547 | MS.gene071429:intron | 25.0% |
| ! | TGGTATTTAGAAGATTTCAT+AGG | - | 50562:9579-9598 | MS.gene071429:intergenic | 25.0% |
| ! | TTGGATTGTAAATTAGATTG+TGG | + | 50562:9186-9205 | MS.gene071429:intron | 25.0% |
| !! | AAGATCTAGATATATCCTTT+TGG | + | 50562:9154-9173 | MS.gene071429:intron | 25.0% |
| !! | ACATGATTTGATAACAGATT+CGG | - | 50562:8429-8448 | MS.gene071429:intergenic | 25.0% |
| !! | TATTTTGTGAATATTCACCA+TGG | + | 50562:8185-8204 | MS.gene071429:intron | 25.0% |
| !!! | GTACTTAACAGTTCTTTTTT+AGG | - | 50562:7707-7726 | MS.gene071429:intergenic | 25.0% |
| !!! | TTTTTGCATTCATTTTGACA+TGG | + | 50562:8109-8128 | MS.gene071429:CDS | 25.0% |
| AAGACAGTGAGAGTAAATAT+TGG | + | 50562:9057-9076 | MS.gene071429:intron | 30.0% | |
| AATCAGTGGAATACAAATTG+GGG | + | 50562:10747-10766 | MS.gene071429:CDS | 30.0% | |
| ACAGTACTTATTGTATGAGA+TGG | + | 50562:10249-10268 | MS.gene071429:intron | 30.0% | |
| ACTATAGTGTCAAAGCATAT+AGG | + | 50562:8866-8885 | MS.gene071429:CDS | 30.0% | |
| AGACAGTGAGAGTAAATATT+GGG | + | 50562:9058-9077 | MS.gene071429:intron | 30.0% | |
| ATCCAACATAATCTTCCAAA+AGG | - | 50562:9172-9191 | MS.gene071429:intergenic | 30.0% | |
| ATGGCAGAAGTTTATAAGAA+CGG | + | 50562:8913-8932 | MS.gene071429:CDS | 30.0% | |
| ATTCAACTGAAAGTGAAATC+TGG | + | 50562:9920-9939 | MS.gene071429:intron | 30.0% | |
| CAAATCAGTGGAATACAAAT+TGG | + | 50562:10745-10764 | MS.gene071429:CDS | 30.0% | |
| CACCAAAAATATTGTAAGAG+AGG | + | 50562:10943-10962 | MS.gene071429:CDS | 30.0% | |
| CAGTACTTATTGTATGAGAT+GGG | + | 50562:10250-10269 | MS.gene071429:intron | 30.0% | |
| CATCCAATTTGATCAAAGTA+TGG | - | 50562:8757-8776 | MS.gene071429:intergenic | 30.0% | |
| CTATAGTGTCAAAGCATATA+GGG | + | 50562:8867-8886 | MS.gene071429:CDS | 30.0% | |
| GATAGAAAAGATAAGGTCAA+AGG | - | 50562:10044-10063 | MS.gene071429:intergenic | 30.0% | |
| GCTTAATTCTCATATTCTTC+AGG | + | 50562:6231-6250 | MS.gene071429:CDS | 30.0% | |
| GGATTTCAACAATCTATACA+CGG | + | 50562:6272-6291 | MS.gene071429:intron | 30.0% | |
| GGGAAAAGATAGAAAAGATA+AGG | - | 50562:10051-10070 | MS.gene071429:intergenic | 30.0% | |
| GTTACTTCAAGATTAAGAGA+GGG | + | 50562:10873-10892 | MS.gene071429:CDS | 30.0% | |
| TAATCTAATCTACTAACTGC+AGG | + | 50562:10847-10866 | MS.gene071429:intron | 30.0% | |
| TAGCTGAAATGAGGAAATAA+AGG | - | 50562:7957-7976 | MS.gene071429:intergenic | 30.0% | |
| TCACAGCTAAACATTACAAT+GGG | + | 50562:9732-9751 | MS.gene071429:intron | 30.0% | |
| TCGTGTCTGAATTAATTCTA+GGG | + | 50562:7049-7068 | MS.gene071429:intron | 30.0% | |
| TGATTGGACTAATTTCAATG+TGG | - | 50562:9337-9356 | MS.gene071429:intergenic | 30.0% | |
| TGTACTAACAAGTGTGTTAA+GGG | + | 50562:7354-7373 | MS.gene071429:intron | 30.0% | |
| TTAGTCACTTAAGCAATGAA+GGG | - | 50562:8682-8701 | MS.gene071429:intergenic | 30.0% | |
| TTATATGTAGTTGATCTGCA+AGG | - | 50562:6707-6726 | MS.gene071429:intergenic | 30.0% | |
| TTCGTGTCTGAATTAATTCT+AGG | + | 50562:7048-7067 | MS.gene071429:intron | 30.0% | |
| TTGTACTAACAAGTGTGTTA+AGG | + | 50562:7353-7372 | MS.gene071429:intron | 30.0% | |
| TTTAGTCACTTAAGCAATGA+AGG | - | 50562:8683-8702 | MS.gene071429:intergenic | 30.0% | |
| ! | AAGTGTTGTTGTCTAATATC+AGG | - | 50562:10659-10678 | MS.gene071429:intergenic | 30.0% |
| ! | AGCACTATTGGAAGAATTTT+AGG | + | 50562:7800-7819 | MS.gene071429:CDS | 30.0% |
| ! | ATCTTTTCTATCTTTTCCCT+TGG | + | 50562:10052-10071 | MS.gene071429:intron | 30.0% |
| ! | CACCTCTCTTACAATATTTT+TGG | - | 50562:10948-10967 | MS.gene071429:intergenic | 30.0% |
| ! | GCTCTTATGATCTGTATTTT+TGG | + | 50562:8710-8729 | MS.gene071429:intron | 30.0% |
| ! | TGTGTTAGAAAGTGTGTAAA+TGG | + | 50562:8817-8836 | MS.gene071429:CDS | 30.0% |
| ! | TTCACCTACTTTGTTTATGT+TGG | + | 50562:6641-6660 | MS.gene071429:intron | 30.0% |
| ! | TTTTTGCTAGATTTAACTGC+TGG | - | 50562:9599-9618 | MS.gene071429:intergenic | 30.0% |
| !! | ATCCTTTTGGAAGATTATGT+TGG | + | 50562:9167-9186 | MS.gene071429:intron | 30.0% |
| !! | ATGAGTCAAAGGTATTCTAA+CGG | - | 50562:10487-10506 | MS.gene071429:intergenic | 30.0% |
| !! | CTACATATAAGAAGTACTCT+TGG | + | 50562:6717-6736 | MS.gene071429:intron | 30.0% |
| !! | CTCGTTTCATTTTGAAAAAC+GGG | + | 50562:10084-10103 | MS.gene071429:intron | 30.0% |
| !! | GCTCGTTTCATTTTGAAAAA+CGG | + | 50562:10083-10102 | MS.gene071429:intron | 30.0% |
| !! | TAAAGTCTTACTTTGGAGTT+TGG | + | 50562:9535-9554 | MS.gene071429:intron | 30.0% |
| !! | TCGTTTCATTTTGAAAAACG+GGG | + | 50562:10085-10104 | MS.gene071429:intron | 30.0% |
| !!! | AGACATTCTTTTTTATGCAC+AGG | + | 50562:7643-7662 | MS.gene071429:intron | 30.0% |
| !!! | AGTTCCATAGACTTTTTTTC+TGG | - | 50562:9798-9817 | MS.gene071429:intergenic | 30.0% |
| !!! | ATAGATGCTGACTCTTTTTT+TGG | + | 50562:7881-7900 | MS.gene071429:intron | 30.0% |
| !!! | ATTCTTTTTTATGCACAGGT+TGG | + | 50562:7647-7666 | MS.gene071429:intron | 30.0% |
| !!! | CTCTCTTACAATATTTTTGG+TGG | - | 50562:10945-10964 | MS.gene071429:intergenic | 30.0% |
| !!! | CTTACAATATTTTTGGTGGA+AGG | - | 50562:10941-10960 | MS.gene071429:intergenic | 30.0% |
| !!! | GCTATTTTTCTTTATGTTCG+TGG | + | 50562:7973-7992 | MS.gene071429:intron | 30.0% |
| !!! | GTTCCATAGACTTTTTTTCT+GGG | - | 50562:9797-9816 | MS.gene071429:intergenic | 30.0% |
| !!! | TCTTTTTTTGGTTGTTGACA+TGG | + | 50562:7893-7912 | MS.gene071429:intron | 30.0% |
| !!! | TTCCATAGACTTTTTTTCTG+GGG | - | 50562:9796-9815 | MS.gene071429:intergenic | 30.0% |
| AAACTTCTGCCATGATATCT+TGG | - | 50562:8906-8925 | MS.gene071429:intergenic | 35.0% | |
| AAAGGAATTTGATGCAAGGA+CGG | + | 50562:7763-7782 | MS.gene071429:CDS | 35.0% | |
| AAATCTGAGAGAAAACAGAG+GGG | + | 50562:9857-9876 | MS.gene071429:intron | 35.0% | |
| AACAGTGAATGCAACTTCAA+CGG | - | 50562:8941-8960 | MS.gene071429:intergenic | 35.0% | |
| AACGAATACAAAGGAGTAAC+AGG | - | 50562:10011-10030 | MS.gene071429:intergenic | 35.0% | |
| AACTTCTGCCATGATATCTT+GGG | - | 50562:8905-8924 | MS.gene071429:intergenic | 35.0% | |
| AAGAAGGTCATTAACAGAGA+GGG | - | 50562:8547-8566 | MS.gene071429:intergenic | 35.0% | |
| AAGATGCTAAAGAGTGATCT+TGG | - | 50562:7533-7552 | MS.gene071429:intergenic | 35.0% | |
| AATACAGATCATAAGAGCCT+AGG | - | 50562:8708-8727 | MS.gene071429:intergenic | 35.0% | |
| AATGAGAGGAACGAATACAA+AGG | - | 50562:10020-10039 | MS.gene071429:intergenic | 35.0% | |
| AATTGAAGATGATGTTACCG+CGG | + | 50562:10910-10929 | MS.gene071429:CDS | 35.0% | |
| ACACACTTTCTAACACACTT+GGG | - | 50562:8814-8833 | MS.gene071429:intergenic | 35.0% | |
| ACGAATACAAAGGAGTAACA+GGG | - | 50562:10010-10029 | MS.gene071429:intergenic | 35.0% | |
| AGAAATCTGAGAGAAAACAG+AGG | + | 50562:9855-9874 | MS.gene071429:intron | 35.0% | |
| AGCTAAACATTACAATGGGT+TGG | + | 50562:9736-9755 | MS.gene071429:intron | 35.0% | |
| AGGAATTTCTACAAGCTTGA+TGG | + | 50562:9620-9639 | MS.gene071429:intron | 35.0% | |
| AGGATCAGATAAGAACTTAG+TGG | - | 50562:8017-8036 | MS.gene071429:intergenic | 35.0% | |
| AGTAACAGGGATAAGTAACA+AGG | - | 50562:9997-10016 | MS.gene071429:intergenic | 35.0% | |
| AGTGTGTGTAACCGTAAAAT+TGG | - | 50562:6435-6454 | MS.gene071429:intergenic | 35.0% | |
| ATAAAGAGGTTACAAAGCCA+TGG | - | 50562:8205-8224 | MS.gene071429:intergenic | 35.0% | |
| ATAAGGTCAAAGGAAATGAG+AGG | - | 50562:10034-10053 | MS.gene071429:intergenic | 35.0% | |
| ATCGTATGTGATTGTGTTGT+TGG | + | 50562:9432-9451 | MS.gene071429:intron | 35.0% | |
| ATTTGTTCTCTTTCGAACCA+GGG | + | 50562:8473-8492 | MS.gene071429:intron | 35.0% | |
| CAAGAGATCAAATGAGTCAA+AGG | - | 50562:10498-10517 | MS.gene071429:intergenic | 35.0% | |
| CCTCATAGTTTACTGATAAG+CGG | + | 50562:8282-8301 | MS.gene071429:intron | 35.0% | |
| CTCATAGTTTACTGATAAGC+GGG | + | 50562:8283-8302 | MS.gene071429:intron | 35.0% | |
| GAAATCTGAGAGAAAACAGA+GGG | + | 50562:9856-9875 | MS.gene071429:intron | 35.0% | |
| GACCCATACTTTGATCAAAT+TGG | + | 50562:8751-8770 | MS.gene071429:CDS | 35.0% | |
| GATAGAAGTTGAAAACTGAC+TGG | + | 50562:9296-9315 | MS.gene071429:intron | 35.0% | |
| GCTTAAGTGACTAAAATCCT+AGG | + | 50562:8688-8707 | MS.gene071429:intron | 35.0% | |
| GGAACCAACATAAACAAAGT+AGG | - | 50562:6648-6667 | MS.gene071429:intergenic | 35.0% | |
| GGGTAACATTTGCAAGAATA+AGG | + | 50562:9454-9473 | MS.gene071429:intron | 35.0% | |
| GGTTACTTCAAGATTAAGAG+AGG | + | 50562:10872-10891 | MS.gene071429:CDS | 35.0% | |
| GGTTCGAAAGAGAACAAATA+TGG | - | 50562:8472-8491 | MS.gene071429:intergenic | 35.0% | |
| GTAACAGGGATAAGTAACAA+GGG | - | 50562:9996-10015 | MS.gene071429:intergenic | 35.0% | |
| GTCACAGCTAAACATTACAA+TGG | + | 50562:9731-9750 | MS.gene071429:intron | 35.0% | |
| GTCTTCTATAAATCATAGGC+AGG | + | 50562:10373-10392 | MS.gene071429:intron | 35.0% | |
| GTGATCTTGGACATAAGTTA+AGG | - | 50562:7520-7539 | MS.gene071429:intergenic | 35.0% | |
| GTGTAAATGGAAACCAGATT+TGG | + | 50562:8830-8849 | MS.gene071429:CDS | 35.0% | |
| TAAAGGAATCACCTGATCTT+TGG | - | 50562:7940-7959 | MS.gene071429:intergenic | 35.0% | |
| TACACACTTTCTAACACACT+TGG | - | 50562:8815-8834 | MS.gene071429:intergenic | 35.0% | |
| TACCCCAGAAAAAAAGTCTA+TGG | + | 50562:9791-9810 | MS.gene071429:intron | 35.0% | |
| TAGTGTTAGAACAAAAACCC+TGG | - | 50562:8493-8512 | MS.gene071429:intergenic | 35.0% | |
| TATTTGTTCTCTTTCGAACC+AGG | + | 50562:8472-8491 | MS.gene071429:intron | 35.0% | |
| TCCAATCATCATTTAAGCGT+AGG | + | 50562:9349-9368 | MS.gene071429:intron | 35.0% | |
| TCTCAGATTTCTCTTACTAG+TGG | - | 50562:9847-9866 | MS.gene071429:intergenic | 35.0% | |
| TGAAATCCAAACGTTGATCA+TGG | - | 50562:6260-6279 | MS.gene071429:intergenic | 35.0% | |
| TGGCAGAAGTTTATAAGAAC+GGG | + | 50562:8914-8933 | MS.gene071429:CDS | 35.0% | |
| TTCTCTTACTAGTGTCCTTA+GGG | - | 50562:7404-7423 | MS.gene071429:intergenic | 35.0% | |
| TTTCTCTTACTAGTGTCCTT+AGG | - | 50562:7405-7424 | MS.gene071429:intergenic | 35.0% | |
| ! | AAGTTGAAAACTGACTGGTT+TGG | + | 50562:9301-9320 | MS.gene071429:intron | 35.0% |
| ! | AGACACGAATATCTTGCTTT+TGG | - | 50562:7037-7056 | MS.gene071429:intergenic | 35.0% |
| ! | ATTGTGGATTGACCTTACAT+TGG | + | 50562:9202-9221 | MS.gene071429:intron | 35.0% |
| ! | GATTTTGCTCACTACAAATC+AGG | + | 50562:10522-10541 | MS.gene071429:CDS | 35.0% |
| ! | GATTTTGGATGAGTTACAAC+AGG | - | 50562:7731-7750 | MS.gene071429:intergenic | 35.0% |
| ! | GCTAAACATTACAATGGGTT+GGG | + | 50562:9737-9756 | MS.gene071429:intron | 35.0% |
| ! | TATGATCATCATTTTCTCGC+AGG | + | 50562:6340-6359 | MS.gene071429:intron | 35.0% |
| ! | TCCTCGTTTCTCCAATTTTA+CGG | + | 50562:6421-6440 | MS.gene071429:CDS | 35.0% |
| ! | TCGTATGTGATTGTGTTGTT+GGG | + | 50562:9433-9452 | MS.gene071429:intron | 35.0% |
| ! | TCTATACACGGTTGATTTCA+TGG | + | 50562:6284-6303 | MS.gene071429:intron | 35.0% |
| ! | TGTCGTCTTTTGTGCTTTTA+GGG | + | 50562:10114-10133 | MS.gene071429:intron | 35.0% |
| ! | TTGTCGTCTTTTGTGCTTTT+AGG | + | 50562:10113-10132 | MS.gene071429:intron | 35.0% |
| !! | CGTTTCATTTTGAAAAACGG+GGG | + | 50562:10086-10105 | MS.gene071429:intron | 35.0% |
| !! | CTCATGTTGATGATGATTCA+GGG | + | 50562:8035-8054 | MS.gene071429:intron | 35.0% |
| !! | TCATCAAAAAAAGTGCCCTA+AGG | + | 50562:7386-7405 | MS.gene071429:intron | 35.0% |
| !! | TTAAGCGTAGGCTATTTCTT+TGG | + | 50562:9361-9380 | MS.gene071429:intron | 35.0% |
| !!! | AGTTGCATTCACTGTTTTTG+AGG | + | 50562:8945-8964 | MS.gene071429:CDS | 35.0% |
| !!! | TTTTTCTGGGGTAACATGAT+TGG | - | 50562:9784-9803 | MS.gene071429:intergenic | 35.0% |
| AATCTGAGAGAAAACAGAGG+GGG | + | 50562:9858-9877 | MS.gene071429:intron | 40.0% | |
| AATGTTCTAGCAAGCTCAAG+CGG | - | 50562:8313-8332 | MS.gene071429:intergenic | 40.0% | |
| ACAGATTAACGAAAACCCAG+AGG | + | 50562:6376-6395 | MS.gene071429:CDS | 40.0% | |
| ACAGTGAATGCAACTTCAAC+GGG | - | 50562:8940-8959 | MS.gene071429:intergenic | 40.0% | |
| ACCGTAAAATTGGAGAAACG+AGG | - | 50562:6425-6444 | MS.gene071429:intergenic | 40.0% | |
| ACTTCTGCCATGATATCTTG+GGG | - | 50562:8904-8923 | MS.gene071429:intergenic | 40.0% | |
| AGGTAACCATGATCAACGTT+TGG | + | 50562:6251-6270 | MS.gene071429:intron | 40.0% | |
| ATAACCTAGGGCAGTAGTTA+AGG | - | 50562:7312-7331 | MS.gene071429:intergenic | 40.0% | |
| ATGGAAACCAGATTTGGAAG+AGG | + | 50562:8836-8855 | MS.gene071429:CDS | 40.0% | |
| ATTGAAGATGATGTTACCGC+GGG | + | 50562:10911-10930 | MS.gene071429:CDS | 40.0% | |
| ATTTCCTTAACTACTGCCCT+AGG | + | 50562:7305-7324 | MS.gene071429:intron | 40.0% | |
| CAAGAAGGTCATTAACAGAG+AGG | - | 50562:8548-8567 | MS.gene071429:intergenic | 40.0% | |
| CAGTGAGAGTAAATATTGGG+AGG | + | 50562:9061-9080 | MS.gene071429:intron | 40.0% | |
| CCGCTTATCAGTAAACTATG+AGG | - | 50562:8285-8304 | MS.gene071429:intergenic | 40.0% | |
| CCTGAATCATCATCAACATG+AGG | - | 50562:8037-8056 | MS.gene071429:intergenic | 40.0% | |
| CTGAAGTTGCTTAAACGTTG+GGG | - | 50562:10303-10322 | MS.gene071429:intergenic | 40.0% | |
| CTGATCTTTGGTGAGGAAAT+CGG | - | 50562:7928-7947 | MS.gene071429:intergenic | 40.0% | |
| GACTCATTTGATCTCTTGAC+AGG | + | 50562:10500-10519 | MS.gene071429:intron | 40.0% | |
| GATCCATGGAACACACAATT+AGG | - | 50562:10276-10295 | MS.gene071429:intergenic | 40.0% | |
| GCCTACGCTTAAATGATGAT+TGG | - | 50562:9353-9372 | MS.gene071429:intergenic | 40.0% | |
| GCTGAAGTTGCTTAAACGTT+GGG | - | 50562:10304-10323 | MS.gene071429:intergenic | 40.0% | |
| GGAGTTTACAAACACATCAC+AGG | + | 50562:10543-10562 | MS.gene071429:CDS | 40.0% | |
| GTAGTCAGCGATAAGAGAAA+GGG | + | 50562:9642-9661 | MS.gene071429:intron | 40.0% | |
| GTCATGCAGTAAAGCTGATT+GGG | + | 50562:10580-10599 | MS.gene071429:CDS | 40.0% | |
| GTCCTTGCATCAAATTCCTT+TGG | - | 50562:7764-7783 | MS.gene071429:intergenic | 40.0% | |
| GTGTGTGAGTAGAGATAAAG+AGG | - | 50562:8219-8238 | MS.gene071429:intergenic | 40.0% | |
| TAGTCAGCGATAAGAGAAAG+GGG | + | 50562:9643-9662 | MS.gene071429:intron | 40.0% | |
| TCAGCAGACTTATGAGTCAT+TGG | + | 50562:10319-10338 | MS.gene071429:intron | 40.0% | |
| TGAAGTTGCTTAAACGTTGG+GGG | - | 50562:10302-10321 | MS.gene071429:intergenic | 40.0% | |
| TGCCAAAGGAATTTGATGCA+AGG | + | 50562:7759-7778 | MS.gene071429:CDS | 40.0% | |
| TGCTGAAGTTGCTTAAACGT+TGG | - | 50562:10305-10324 | MS.gene071429:intergenic | 40.0% | |
| TTCAGCTTCTTGCAAATCAG+TGG | + | 50562:10733-10752 | MS.gene071429:intron | 40.0% | |
| TTGGGAGAATGCTTTGTGTT+CGG | + | 50562:9755-9774 | MS.gene071429:intron | 40.0% | |
| TTGGTTCCAATCTCTGTGAT+AGG | + | 50562:6660-6679 | MS.gene071429:intron | 40.0% | |
| ! | CGTATGTGATTGTGTTGTTG+GGG | + | 50562:9434-9453 | MS.gene071429:intron | 40.0% |
| ! | CTAGTTGTTATTAGTGCCCT+CGG | - | 50562:7092-7111 | MS.gene071429:intergenic | 40.0% |
| ! | GTCGTCTTTTGTGCTTTTAG+GGG | + | 50562:10115-10134 | MS.gene071429:intron | 40.0% |
| ! | TATTCTAACGGATGCGAGAA+TGG | - | 50562:10475-10494 | MS.gene071429:intergenic | 40.0% |
| ! | TCGTCTTTTGTGCTTTTAGG+GGG | + | 50562:10116-10135 | MS.gene071429:intron | 40.0% |
| !! | AAACGAGCACTGAAAACCAA+GGG | - | 50562:10071-10090 | MS.gene071429:intergenic | 40.0% |
| !! | CATCGCTTTTGTGCTGTATA+TGG | + | 50562:10402-10421 | MS.gene071429:intron | 40.0% |
| !! | CCTCATGTTGATGATGATTC+AGG | + | 50562:8034-8053 | MS.gene071429:intron | 40.0% |
| AAGAGAGGGACAAACGAATG+TGG | + | 50562:10887-10906 | MS.gene071429:CDS | 45.0% | |
| AATGACCTTCTTGCATGCTG+TGG | + | 50562:8555-8574 | MS.gene071429:CDS | 45.0% | |
| AATTTGATGCAAGGACGGCT+TGG | + | 50562:7768-7787 | MS.gene071429:CDS | 45.0% | |
| ACAGGGATAAGTAACAAGGG+TGG | - | 50562:9993-10012 | MS.gene071429:intergenic | 45.0% | |
| AGTCAGCGATAAGAGAAAGG+GGG | + | 50562:9644-9663 | MS.gene071429:intron | 45.0% | |
| AGTCCACCTATCACAGAGAT+TGG | - | 50562:6669-6688 | MS.gene071429:intergenic | 45.0% | |
| ATATTGGGAGGCTCTGTTCA+AGG | + | 50562:9073-9092 | MS.gene071429:intron | 45.0% | |
| ATGATGATTCAGGGTCACTG+CGG | + | 50562:8044-8063 | MS.gene071429:intron | 45.0% | |
| ATGCAGTAAAGCTGATTGGG+TGG | + | 50562:10583-10602 | MS.gene071429:CDS | 45.0% | |
| ATGCTGTGGATTTCTCTGTG+GGG | + | 50562:8569-8588 | MS.gene071429:CDS | 45.0% | |
| ATTAACGAAAACCCAGAGGC+AGG | + | 50562:6380-6399 | MS.gene071429:CDS | 45.0% | |
| CAAATTGGATGTTCTCACCC+TGG | + | 50562:8766-8785 | MS.gene071429:CDS | 45.0% | |
| CACTTGGGAGTTTGATATGC+TGG | - | 50562:8799-8818 | MS.gene071429:intergenic | 45.0% | |
| CATGCTGTGGATTTCTCTGT+GGG | + | 50562:8568-8587 | MS.gene071429:CDS | 45.0% | |
| CCTCTTGAAAGAGGAACTAC+GGG | + | 50562:8255-8274 | MS.gene071429:intron | 45.0% | |
| CGATTTCCTCACCAAAGATC+AGG | + | 50562:7926-7945 | MS.gene071429:intron | 45.0% | |
| CGTGGTTCACTGTGTTTCTT+TGG | + | 50562:7991-8010 | MS.gene071429:intron | 45.0% | |
| CTAATCTACTAACTGCAGGC+TGG | + | 50562:10851-10870 | MS.gene071429:intron | 45.0% | |
| CTACTCACACACCTACTTGA+GGG | + | 50562:8227-8246 | MS.gene071429:intron | 45.0% | |
| GAAATCCACAGCATGCAAGA+AGG | - | 50562:8563-8582 | MS.gene071429:intergenic | 45.0% | |
| GAATCACCTGATCTTTGGTG+AGG | - | 50562:7935-7954 | MS.gene071429:intergenic | 45.0% | |
| GCCTCTTGAAAGAGGAACTA+CGG | + | 50562:8254-8273 | MS.gene071429:intron | 45.0% | |
| GCTTTGACCTCTTCCAAATC+TGG | - | 50562:8846-8865 | MS.gene071429:intergenic | 45.0% | |
| GGACAATTTAAGCGCCTTCT+TGG | + | 50562:7668-7687 | MS.gene071429:CDS | 45.0% | |
| GGTAGTCAGCGATAAGAGAA+AGG | + | 50562:9641-9660 | MS.gene071429:intron | 45.0% | |
| GGTCATGCAGTAAAGCTGAT+TGG | + | 50562:10579-10598 | MS.gene071429:CDS | 45.0% | |
| GTCTGATCCCCAAGATATCA+TGG | + | 50562:8894-8913 | MS.gene071429:CDS | 45.0% | |
| GTGCTTGTTTGACTCCAAGA+AGG | - | 50562:7685-7704 | MS.gene071429:intergenic | 45.0% | |
| GTTCCAATCTCTGTGATAGG+TGG | + | 50562:6663-6682 | MS.gene071429:intron | 45.0% | |
| TACTCACACACCTACTTGAG+GGG | + | 50562:8228-8247 | MS.gene071429:intron | 45.0% | |
| TAGTTTACTGATAAGCGGGC+AGG | + | 50562:8287-8306 | MS.gene071429:intron | 45.0% | |
| TCTACTCACACACCTACTTG+AGG | + | 50562:8226-8245 | MS.gene071429:intron | 45.0% | |
| TGATGAAGGGGAGGACTATT+GGG | + | 50562:10614-10633 | MS.gene071429:CDS | 45.0% | |
| TGCAGTAAAGCTGATTGGGT+GGG | + | 50562:10584-10603 | MS.gene071429:CDS | 45.0% | |
| TGTAAGAGAGGTGACTGACA+TGG | + | 50562:10955-10974 | MS.gene071429:CDS | 45.0% | |
| ! | AAGTATCGCCACGCATAAAG+TGG | - | 50562:8615-8634 | MS.gene071429:intergenic | 45.0% |
| ! | GCTTTTGTGCTGTATATGGC+TGG | + | 50562:10406-10425 | MS.gene071429:intron | 45.0% |
| !! | GAAACGAGCACTGAAAACCA+AGG | - | 50562:10072-10091 | MS.gene071429:intergenic | 45.0% |
| !! | TCTTTTGTGCTTTTAGGGGG+CGG | + | 50562:10119-10138 | MS.gene071429:intron | 45.0% |
| ACTGACATGGATGCTGATGC+TGG | + | 50562:10968-10987 | MS.gene071429:CDS | 50.0% | |
| ATCACAGGTTCTGCACTAGG+TGG | + | 50562:10558-10577 | MS.gene071429:CDS | 50.0% | |
| CACATCACAGGTTCTGCACT+AGG | + | 50562:10555-10574 | MS.gene071429:CDS | 50.0% | |
| CATGCTTACTAGTGCTCCGA+GGG | + | 50562:7073-7092 | MS.gene071429:intron | 50.0% | |
| CCCGTAGTTCCTCTTTCAAG+AGG | - | 50562:8258-8277 | MS.gene071429:intergenic | 50.0% | |
| CCTCTTCAGTGACAACACCA+TGG | - | 50562:8644-8663 | MS.gene071429:intergenic | 50.0% | |
| CTGACATGGATGCTGATGCT+GGG | + | 50562:10969-10988 | MS.gene071429:CDS | 50.0% | |
| GCAGTAAAGCTGATTGGGTG+GGG | + | 50562:10585-10604 | MS.gene071429:CDS | 50.0% | |
| GCATGCTGTGGATTTCTCTG+TGG | + | 50562:8567-8586 | MS.gene071429:CDS | 50.0% | |
| GGGCCTAATTGTGTGTTCCA+TGG | + | 50562:10270-10289 | MS.gene071429:intron | 50.0% | |
| GGTGGGGAACAAGTGATGAA+GGG | + | 50562:10601-10620 | MS.gene071429:CDS | 50.0% | |
| GTGATGAAGGGGAGGACTAT+TGG | + | 50562:10613-10632 | MS.gene071429:CDS | 50.0% | |
| GTGGGGAACAAGTGATGAAG+GGG | + | 50562:10602-10621 | MS.gene071429:CDS | 50.0% | |
| TCATGCTTACTAGTGCTCCG+AGG | + | 50562:7072-7091 | MS.gene071429:intron | 50.0% | |
| TGACATGGATGCTGATGCTG+GGG | + | 50562:10970-10989 | MS.gene071429:CDS | 50.0% | |
| TGAGAGAAAACAGAGGGGGT+GGG | + | 50562:9862-9881 | MS.gene071429:intron | 50.0% | |
| TGCGGTTCTTGTTGGGCATT+TGG | + | 50562:8062-8081 | MS.gene071429:CDS | 50.0% | |
| TGGCGATACTTAGCTCACCA+TGG | + | 50562:8624-8643 | MS.gene071429:CDS | 50.0% | |
| TGGTCGCAGTGTAGCACTAT+TGG | + | 50562:7788-7807 | MS.gene071429:CDS | 50.0% | |
| TTTGGTGGAAGGTAAACCCG+CGG | - | 50562:10930-10949 | MS.gene071429:intergenic | 50.0% | |
| ! | GTCGGAGGTGTAGGCAAAAT+TGG | + | 50562:8403-8422 | MS.gene071429:intron | 50.0% |
| !! | CCATGGTGTTGTCACTGAAG+AGG | + | 50562:8641-8660 | MS.gene071429:CDS | 50.0% |
| !! | GATATGCTGGCTCACAACCA+GGG | - | 50562:8786-8805 | MS.gene071429:intergenic | 50.0% |
| !! | GGCGGATTGACTTAGGAGTT+AGG | + | 50562:10137-10156 | MS.gene071429:intron | 50.0% |
| !! | TGATATGCTGGCTCACAACC+AGG | - | 50562:8787-8806 | MS.gene071429:intergenic | 50.0% |
| !! | TTTAGGGGGCGGATTGACTT+AGG | + | 50562:10130-10149 | MS.gene071429:intron | 50.0% |
| AAGAGGCAAGCCCCTCAAGT+AGG | - | 50562:8241-8260 | MS.gene071429:intergenic | 55.0% | |
| ACGAAAACCCAGAGGCAGGA+TGG | + | 50562:6384-6403 | MS.gene071429:CDS | 55.0% | |
| AGGGGCTTGCCTCTTGAAAG+AGG | + | 50562:8246-8265 | MS.gene071429:intron | 55.0% | |
| AGGGTCACTGCGGTTCTTGT+TGG | + | 50562:8054-8073 | MS.gene071429:intron | 55.0% | |
| CAGCCAAGCCACTCTGTAGT+CGG | + | 50562:8385-8404 | MS.gene071429:intron | 55.0% | |
| CGAAAACCCAGAGGCAGGAT+GGG | + | 50562:6385-6404 | MS.gene071429:CDS | 55.0% | |
| CTACACCTCCGACTACAGAG+TGG | - | 50562:8396-8415 | MS.gene071429:intergenic | 55.0% | |
| CTGAGAGAAAACAGAGGGGG+TGG | + | 50562:9861-9880 | MS.gene071429:intron | 55.0% | |
| GGGAACAAGTGATGAAGGGG+AGG | + | 50562:10605-10624 | MS.gene071429:CDS | 55.0% | |
| GGGTCACTGCGGTTCTTGTT+GGG | + | 50562:8055-8074 | MS.gene071429:intron | 55.0% | |
| GGGTGGGGAACAAGTGATGA+AGG | + | 50562:10600-10619 | MS.gene071429:CDS | 55.0% | |
| TGTGGATTTCTCTGTGGGGC+TGG | + | 50562:8573-8592 | MS.gene071429:CDS | 55.0% | |
| ! | AACGTTGGGGGTGTGATCCA+TGG | - | 50562:10290-10309 | MS.gene071429:intergenic | 55.0% |
| ! | CACTCTGTAGTCGGAGGTGT+AGG | + | 50562:8394-8413 | MS.gene071429:intron | 55.0% |
| AAACCCAGAGGCAGGATGGG+AGG | + | 50562:6388-6407 | MS.gene071429:CDS | 60.0% | |
| CCAAGCCACTCTGTAGTCGG+AGG | + | 50562:8388-8407 | MS.gene071429:intron | 60.0% | |
| CCTCCGACTACAGAGTGGCT+TGG | - | 50562:8391-8410 | MS.gene071429:intergenic | 60.0% | |
| GGGGGACTCCACTTTATGCG+TGG | + | 50562:8604-8623 | MS.gene071429:CDS | 60.0% | |
| !! | TCTGTGGGGCTGGCTGTGAT+GGG | + | 50562:8583-8602 | MS.gene071429:CDS | 60.0% |
| CAGCCTCCCATCCTGCCTCT+GGG | - | 50562:6394-6413 | MS.gene071429:intergenic | 65.0% | |
| !! | CTCTGTGGGGCTGGCTGTGA+TGG | + | 50562:8582-8601 | MS.gene071429:CDS | 65.0% |
| !! | CTGTGGGGCTGGCTGTGATG+GGG | + | 50562:8584-8603 | MS.gene071429:CDS | 65.0% |
| !! | TGTGGGGCTGGCTGTGATGG+GGG | + | 50562:8585-8604 | MS.gene071429:CDS | 65.0% |
| GCAGCCTCCCATCCTGCCTC+TGG | - | 50562:6395-6414 | MS.gene071429:intergenic | 70.0% | |
| !! | GTGGGGCTGGCTGTGATGGG+GGG | + | 50562:8586-8605 | MS.gene071429:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 50562 | gene | 6205 | 10991 | 6205 | ID=MS.gene071429 |
| 50562 | mRNA | 6205 | 10991 | 6205 | ID=MS.gene071429.t1;Parent=MS.gene071429 |
| 50562 | exon | 6205 | 6252 | 6205 | ID=MS.gene071429.t1.exon1;Parent=MS.gene071429.t1 |
| 50562 | CDS | 6205 | 6252 | 6205 | ID=cds.MS.gene071429.t1;Parent=MS.gene071429.t1 |
| 50562 | exon | 6362 | 6442 | 6362 | ID=MS.gene071429.t1.exon2;Parent=MS.gene071429.t1 |
| 50562 | CDS | 6362 | 6442 | 6362 | ID=cds.MS.gene071429.t1;Parent=MS.gene071429.t1 |
| 50562 | exon | 7665 | 7821 | 7665 | ID=MS.gene071429.t1.exon3;Parent=MS.gene071429.t1 |
| 50562 | CDS | 7665 | 7821 | 7665 | ID=cds.MS.gene071429.t1;Parent=MS.gene071429.t1 |
| 50562 | exon | 7943 | 7947 | 7943 | ID=MS.gene071429.t1.exon4;Parent=MS.gene071429.t1 |
| 50562 | CDS | 7943 | 7947 | 7943 | ID=cds.MS.gene071429.t1;Parent=MS.gene071429.t1 |
| 50562 | exon | 8056 | 8130 | 8056 | ID=MS.gene071429.t1.exon5;Parent=MS.gene071429.t1 |
| 50562 | CDS | 8056 | 8130 | 8056 | ID=cds.MS.gene071429.t1;Parent=MS.gene071429.t1 |
| 50562 | exon | 8537 | 8662 | 8537 | ID=MS.gene071429.t1.exon6;Parent=MS.gene071429.t1 |
| 50562 | CDS | 8537 | 8662 | 8537 | ID=cds.MS.gene071429.t1;Parent=MS.gene071429.t1 |
| 50562 | exon | 8748 | 8966 | 8748 | ID=MS.gene071429.t1.exon7;Parent=MS.gene071429.t1 |
| 50562 | CDS | 8748 | 8966 | 8748 | ID=cds.MS.gene071429.t1;Parent=MS.gene071429.t1 |
| 50562 | exon | 10522 | 10635 | 10522 | ID=MS.gene071429.t1.exon8;Parent=MS.gene071429.t1 |
| 50562 | CDS | 10522 | 10635 | 10522 | ID=cds.MS.gene071429.t1;Parent=MS.gene071429.t1 |
| 50562 | exon | 10738 | 10773 | 10738 | ID=MS.gene071429.t1.exon9;Parent=MS.gene071429.t1 |
| 50562 | CDS | 10738 | 10773 | 10738 | ID=cds.MS.gene071429.t1;Parent=MS.gene071429.t1 |
| 50562 | exon | 10869 | 10991 | 10869 | ID=MS.gene071429.t1.exon10;Parent=MS.gene071429.t1 |
| 50562 | CDS | 10869 | 10991 | 10869 | ID=cds.MS.gene071429.t1;Parent=MS.gene071429.t1 |
| Gene Sequence |
| Protein sequence |
