Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072616.t1 | ABD32840.1 | 96.6 | 324 | 6 | 1 | 1 | 319 | 22 | 345 | 7.90E-189 | 669.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072616.t1 | Q93VC9 | 76.8 | 311 | 72 | 0 | 8 | 318 | 39 | 349 | 4.6e-153 | 542.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072616.t1 | B7FJ05 | 96.6 | 324 | 6 | 1 | 1 | 319 | 24 | 347 | 5.7e-189 | 669.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050819 | MS.gene072616 | PPI |
| MS.gene28614 | MS.gene072616 | PPI |
| MS.gene071429 | MS.gene072616 | PPI |
| MS.gene072617 | MS.gene072616 | PPI |
| MS.gene072618 | MS.gene072616 | PPI |
| MS.gene071430 | MS.gene072616 | PPI |
| MS.gene22772 | MS.gene072616 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072616.t1 | MTR_7g111060 | 96.605 | 324 | 6 | 1 | 1 | 319 | 24 | 347 | 0.0 | 656 |
| MS.gene072616.t1 | MTR_7g111050 | 87.926 | 323 | 35 | 1 | 1 | 319 | 22 | 344 | 0.0 | 602 |
| MS.gene072616.t1 | MTR_7g111050 | 86.786 | 280 | 33 | 1 | 1 | 276 | 17 | 296 | 0.0 | 518 |
| MS.gene072616.t1 | MTR_4g125300 | 32.975 | 279 | 152 | 9 | 30 | 302 | 91 | 340 | 3.07e-34 | 128 |
| MS.gene072616.t1 | MTR_4g094918 | 29.562 | 274 | 162 | 12 | 38 | 302 | 82 | 333 | 1.49e-26 | 107 |
| MS.gene072616.t1 | MTR_7g079230 | 30.081 | 246 | 141 | 6 | 78 | 317 | 120 | 340 | 8.95e-26 | 105 |
| MS.gene072616.t1 | MTR_3g075390 | 27.941 | 272 | 168 | 9 | 38 | 302 | 86 | 336 | 4.09e-25 | 103 |
| MS.gene072616.t1 | MTR_7g078600 | 31.140 | 228 | 128 | 6 | 81 | 302 | 125 | 329 | 4.31e-25 | 103 |
| MS.gene072616.t1 | MTR_2g015850 | 28.148 | 270 | 165 | 8 | 38 | 302 | 110 | 355 | 1.37e-24 | 102 |
| MS.gene072616.t1 | MTR_1g023210 | 28.025 | 314 | 179 | 13 | 10 | 307 | 75 | 357 | 6.60e-24 | 100 |
| MS.gene072616.t1 | MTR_4g071060 | 29.371 | 286 | 159 | 12 | 38 | 307 | 95 | 353 | 1.74e-23 | 99.4 |
| MS.gene072616.t1 | MTR_4g107930 | 28.400 | 250 | 145 | 9 | 61 | 302 | 113 | 336 | 3.66e-23 | 98.2 |
| MS.gene072616.t1 | MTR_3g102220 | 28.315 | 279 | 159 | 12 | 38 | 302 | 102 | 353 | 4.61e-23 | 99.4 |
| MS.gene072616.t1 | MTR_1g107550 | 28.125 | 288 | 172 | 12 | 38 | 315 | 98 | 360 | 4.76e-23 | 99.4 |
| MS.gene072616.t1 | MTR_2g083930 | 28.253 | 269 | 160 | 7 | 40 | 302 | 94 | 335 | 4.83e-23 | 97.8 |
| MS.gene072616.t1 | MTR_4g104370 | 27.354 | 223 | 136 | 7 | 85 | 302 | 134 | 335 | 5.72e-23 | 97.8 |
| MS.gene072616.t1 | MTR_4g047610 | 28.112 | 249 | 147 | 8 | 61 | 302 | 111 | 334 | 7.92e-23 | 97.4 |
| MS.gene072616.t1 | MTR_5g022560 | 27.711 | 249 | 148 | 8 | 61 | 302 | 112 | 335 | 8.27e-23 | 97.4 |
| MS.gene072616.t1 | MTR_4g079470 | 29.333 | 225 | 131 | 7 | 85 | 302 | 133 | 336 | 1.28e-22 | 96.7 |
| MS.gene072616.t1 | MTR_2g090890 | 26.786 | 280 | 169 | 10 | 35 | 307 | 83 | 333 | 1.52e-22 | 96.3 |
| MS.gene072616.t1 | MTR_4g079770 | 29.333 | 225 | 131 | 7 | 85 | 302 | 133 | 336 | 2.38e-22 | 95.9 |
| MS.gene072616.t1 | MTR_4g079440 | 28.205 | 273 | 161 | 9 | 41 | 302 | 88 | 336 | 6.81e-22 | 94.7 |
| MS.gene072616.t1 | MTR_2g015920 | 30.932 | 236 | 133 | 8 | 68 | 299 | 134 | 343 | 7.35e-22 | 95.1 |
| MS.gene072616.t1 | MTR_4g079800 | 28.194 | 227 | 131 | 7 | 85 | 302 | 133 | 336 | 2.02e-21 | 93.6 |
| MS.gene072616.t1 | MTR_4g080730 | 27.473 | 273 | 165 | 10 | 39 | 305 | 89 | 334 | 3.35e-21 | 92.8 |
| MS.gene072616.t1 | MTR_4g080700 | 27.473 | 273 | 165 | 10 | 39 | 305 | 89 | 334 | 3.84e-21 | 92.4 |
| MS.gene072616.t1 | MTR_4g080360 | 29.694 | 229 | 132 | 8 | 81 | 302 | 127 | 333 | 5.67e-21 | 92.0 |
| MS.gene072616.t1 | MTR_3g116080 | 28.413 | 271 | 161 | 12 | 39 | 302 | 95 | 339 | 6.11e-20 | 89.4 |
| MS.gene072616.t1 | MTR_1g018840 | 28.470 | 281 | 156 | 13 | 38 | 302 | 102 | 353 | 8.25e-20 | 90.1 |
| MS.gene072616.t1 | MTR_1g018840 | 28.470 | 281 | 156 | 13 | 38 | 302 | 102 | 353 | 1.13e-19 | 89.4 |
| MS.gene072616.t1 | MTR_2g067900 | 25.796 | 314 | 193 | 11 | 3 | 302 | 30 | 317 | 1.63e-18 | 85.1 |
| MS.gene072616.t1 | MTR_2g075830 | 29.075 | 227 | 129 | 7 | 85 | 302 | 129 | 332 | 9.79e-17 | 80.1 |
| MS.gene072616.t1 | MTR_1g023810 | 28.000 | 250 | 146 | 10 | 60 | 302 | 33 | 255 | 1.06e-16 | 79.0 |
| MS.gene072616.t1 | MTR_2g064475 | 28.444 | 225 | 119 | 11 | 82 | 295 | 138 | 331 | 2.97e-16 | 79.0 |
| MS.gene072616.t1 | MTR_2g015930 | 29.412 | 221 | 125 | 8 | 85 | 299 | 148 | 343 | 3.84e-16 | 78.6 |
| MS.gene072616.t1 | MTR_1g094135 | 27.778 | 252 | 140 | 10 | 75 | 310 | 141 | 366 | 1.17e-15 | 77.4 |
| MS.gene072616.t1 | MTR_2g015840 | 40.909 | 88 | 50 | 2 | 214 | 301 | 173 | 258 | 1.52e-14 | 72.8 |
| MS.gene072616.t1 | MTR_7g079130 | 41.463 | 82 | 42 | 3 | 226 | 302 | 9 | 89 | 1.29e-13 | 66.2 |
| MS.gene072616.t1 | MTR_7g078580 | 36.957 | 92 | 49 | 3 | 217 | 302 | 5 | 93 | 1.77e-12 | 63.9 |
| MS.gene072616.t1 | MTR_4g065077 | 27.273 | 231 | 130 | 10 | 75 | 299 | 141 | 339 | 1.89e-11 | 64.7 |
| MS.gene072616.t1 | MTR_8g086470 | 27.273 | 231 | 130 | 10 | 75 | 299 | 141 | 339 | 1.96e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072616.t1 | AT1G02305 | 75.949 | 316 | 76 | 0 | 3 | 318 | 34 | 349 | 0.0 | 529 |
| MS.gene072616.t1 | AT4G01610 | 75.394 | 317 | 78 | 0 | 2 | 318 | 30 | 346 | 0.0 | 522 |
| MS.gene072616.t1 | AT4G01610 | 75.000 | 316 | 79 | 0 | 3 | 318 | 31 | 346 | 0.0 | 516 |
| MS.gene072616.t1 | AT1G02300 | 67.062 | 337 | 91 | 1 | 2 | 318 | 30 | 366 | 8.50e-173 | 484 |
| MS.gene072616.t1 | AT3G45310 | 32.117 | 274 | 146 | 10 | 38 | 302 | 106 | 348 | 2.12e-29 | 115 |
| MS.gene072616.t1 | AT5G60360 | 32.103 | 271 | 150 | 10 | 38 | 302 | 106 | 348 | 2.14e-29 | 115 |
| MS.gene072616.t1 | AT3G19400 | 30.303 | 297 | 169 | 12 | 24 | 312 | 79 | 345 | 3.96e-29 | 115 |
| MS.gene072616.t1 | AT5G60360 | 30.333 | 300 | 173 | 12 | 9 | 301 | 77 | 347 | 2.72e-28 | 112 |
| MS.gene072616.t1 | AT3G45310 | 31.985 | 272 | 145 | 10 | 38 | 300 | 106 | 346 | 3.33e-28 | 112 |
| MS.gene072616.t1 | AT5G60360 | 31.599 | 269 | 150 | 10 | 38 | 300 | 106 | 346 | 5.89e-28 | 111 |
| MS.gene072616.t1 | AT3G43960 | 28.417 | 278 | 175 | 9 | 24 | 299 | 76 | 331 | 1.07e-26 | 108 |
| MS.gene072616.t1 | AT4G36880 | 28.276 | 290 | 177 | 10 | 38 | 318 | 102 | 369 | 5.95e-26 | 106 |
| MS.gene072616.t1 | AT3G19390 | 28.622 | 283 | 169 | 11 | 27 | 302 | 81 | 337 | 6.02e-25 | 104 |
| MS.gene072616.t1 | AT1G29080 | 28.333 | 300 | 180 | 10 | 5 | 295 | 53 | 326 | 5.11e-24 | 100 |
| MS.gene072616.t1 | AT4G23520 | 30.657 | 274 | 154 | 12 | 38 | 302 | 95 | 341 | 6.64e-24 | 100 |
| MS.gene072616.t1 | AT3G48340 | 27.698 | 278 | 162 | 11 | 38 | 302 | 84 | 335 | 1.43e-23 | 99.8 |
| MS.gene072616.t1 | AT5G43060 | 29.197 | 274 | 156 | 13 | 38 | 302 | 101 | 345 | 2.38e-22 | 97.4 |
| MS.gene072616.t1 | AT1G09850 | 27.508 | 309 | 186 | 13 | 4 | 302 | 45 | 325 | 8.21e-22 | 95.5 |
| MS.gene072616.t1 | AT1G47128 | 26.909 | 275 | 162 | 11 | 38 | 302 | 99 | 344 | 9.06e-22 | 95.5 |
| MS.gene072616.t1 | AT3G49340 | 27.305 | 282 | 175 | 9 | 19 | 295 | 65 | 321 | 1.15e-21 | 94.0 |
| MS.gene072616.t1 | AT4G39090 | 28.472 | 288 | 160 | 12 | 38 | 307 | 98 | 357 | 2.22e-21 | 93.6 |
| MS.gene072616.t1 | AT2G21430 | 28.669 | 293 | 165 | 12 | 38 | 313 | 95 | 360 | 3.54e-21 | 93.2 |
| MS.gene072616.t1 | AT5G50260 | 25.436 | 287 | 178 | 10 | 38 | 313 | 84 | 345 | 3.61e-21 | 92.8 |
| MS.gene072616.t1 | AT4G35350 | 28.417 | 278 | 153 | 12 | 39 | 302 | 99 | 344 | 3.81e-21 | 92.8 |
| MS.gene072616.t1 | AT4G16190 | 28.819 | 288 | 161 | 11 | 38 | 307 | 102 | 363 | 1.83e-20 | 91.3 |
| MS.gene072616.t1 | AT2G34080 | 30.986 | 213 | 122 | 6 | 85 | 295 | 136 | 325 | 1.85e-20 | 90.9 |
| MS.gene072616.t1 | AT1G20850 | 27.839 | 273 | 162 | 12 | 39 | 302 | 99 | 345 | 4.51e-20 | 89.7 |
| MS.gene072616.t1 | AT3G48350 | 24.749 | 299 | 184 | 11 | 38 | 319 | 84 | 358 | 7.56e-20 | 89.4 |
| MS.gene072616.t1 | AT2G27420 | 26.667 | 300 | 191 | 10 | 5 | 295 | 49 | 328 | 8.74e-20 | 89.0 |
| MS.gene072616.t1 | AT1G06260 | 27.574 | 272 | 163 | 10 | 38 | 302 | 90 | 334 | 2.45e-19 | 87.4 |
| MS.gene072616.t1 | AT1G29090 | 25.667 | 300 | 189 | 10 | 5 | 295 | 61 | 335 | 1.85e-18 | 85.1 |
| MS.gene072616.t1 | AT5G45890 | 25.949 | 316 | 189 | 13 | 4 | 302 | 50 | 337 | 4.28e-18 | 84.0 |
| MS.gene072616.t1 | AT4G11310 | 26.619 | 278 | 160 | 11 | 39 | 302 | 97 | 344 | 5.67e-18 | 84.0 |
| MS.gene072616.t1 | AT4G11320 | 25.159 | 314 | 169 | 13 | 4 | 295 | 71 | 340 | 2.67e-17 | 82.0 |
| MS.gene072616.t1 | AT4G11320 | 25.159 | 314 | 169 | 13 | 4 | 295 | 71 | 340 | 2.67e-17 | 82.0 |
| MS.gene072616.t1 | AT3G54940 | 28.000 | 250 | 138 | 11 | 75 | 308 | 137 | 360 | 1.17e-16 | 80.1 |
| MS.gene072616.t1 | AT3G19400 | 31.973 | 147 | 93 | 4 | 24 | 168 | 79 | 220 | 3.98e-14 | 72.0 |
Find 0 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAATTAACAAAAAATATT+TGG | + | 50560:18153-18172 | MS.gene072616:intron | 10.0% |
| !!! | GATTTTAATTCTTATTATTT+TGG | + | 50560:14318-14337 | MS.gene072616:intron | 10.0% |
| !! | TACAACTCTTAATAAAATTA+AGG | - | 50560:15044-15063 | MS.gene072616:intergenic | 15.0% |
| !! | TATTCAAAAAAATAAGAAGA+AGG | - | 50560:15545-15564 | MS.gene072616:intergenic | 15.0% |
| !!! | ACTTTAAAGAAAGAAAAAAA+TGG | - | 50560:14277-14296 | MS.gene072616:intergenic | 15.0% |
| !!! | CTTTCTATTTTTATGATTTT+GGG | + | 50560:14717-14736 | MS.gene072616:intron | 15.0% |
| !!! | TCTTTCTATTTTTATGATTT+TGG | + | 50560:14716-14735 | MS.gene072616:intron | 15.0% |
| !!! | TTTTTTTTTCTAATCATGTT+AGG | - | 50560:14535-14554 | MS.gene072616:intergenic | 15.0% |
| !! | AAAAGTGATAGAAAAATGAA+AGG | - | 50560:14181-14200 | MS.gene072616:intergenic | 20.0% |
| !! | AAAATCATTAAAATTGCCAA+AGG | + | 50560:15451-15470 | MS.gene072616:CDS | 20.0% |
| !! | AAAATTAAGGAAAATAACCT+AGG | - | 50560:15031-15050 | MS.gene072616:intergenic | 20.0% |
| !! | AAAATTTAATTGCAAAAGGA+TGG | - | 50560:16694-16713 | MS.gene072616:intergenic | 20.0% |
| !! | AAAGTGATAGAAAAATGAAA+GGG | - | 50560:14180-14199 | MS.gene072616:intergenic | 20.0% |
| !! | AAATGAAAGGGTTATATATT+TGG | - | 50560:14168-14187 | MS.gene072616:intergenic | 20.0% |
| !! | AAATTAAGGAAAATAACCTA+GGG | - | 50560:15030-15049 | MS.gene072616:intergenic | 20.0% |
| !! | AAATTTAATTGCAAAAGGAT+GGG | - | 50560:16693-16712 | MS.gene072616:intergenic | 20.0% |
| !! | AACTAATATAGAAATTGTGT+CGG | - | 50560:15202-15221 | MS.gene072616:intergenic | 20.0% |
| !! | ATCAAAAATATCAAATGTGT+TGG | - | 50560:14566-14585 | MS.gene072616:intergenic | 20.0% |
| !! | ATTAAGCTTCATTAATAGAA+GGG | + | 50560:16063-16082 | MS.gene072616:intron | 20.0% |
| !! | GAAAGAAAGAAAGAAAAAAT+TGG | - | 50560:14673-14692 | MS.gene072616:intergenic | 20.0% |
| !! | GTCTTAAAAATTTGACTATA+AGG | - | 50560:16748-16767 | MS.gene072616:intergenic | 20.0% |
| !! | TAAAAATTTGACTATAAGGA+AGG | - | 50560:16744-16763 | MS.gene072616:intergenic | 20.0% |
| !! | TCAAAAATATCAAATGTGTT+GGG | - | 50560:14565-14584 | MS.gene072616:intergenic | 20.0% |
| !! | TCTTAACTATAAATCATTTC+AGG | + | 50560:16834-16853 | MS.gene072616:intron | 20.0% |
| !! | TTAGTTAAGGAAACAAAAAA+AGG | + | 50560:14819-14838 | MS.gene072616:intron | 20.0% |
| !!! | AAATCATTTTTGCTCATATT+TGG | - | 50560:14450-14469 | MS.gene072616:intergenic | 20.0% |
| !!! | AATAACAACTAGTTTAGTTA+AGG | + | 50560:14806-14825 | MS.gene072616:intron | 20.0% |
| !!! | AATAAGTACTGTTTTACTTT+AGG | - | 50560:17947-17966 | MS.gene072616:intergenic | 20.0% |
| !!! | AATCAAGTTTTAGTATACAT+AGG | - | 50560:14302-14321 | MS.gene072616:intergenic | 20.0% |
| !!! | ATCAAGTATTAAAAAGTGTA+AGG | - | 50560:14900-14919 | MS.gene072616:intergenic | 20.0% |
| !!! | GAATTATTCTTCATTTTGAA+TGG | + | 50560:18491-18510 | MS.gene072616:intron | 20.0% |
| !!! | GATATCTAATTTGTAATACA+AGG | + | 50560:17186-17205 | MS.gene072616:intron | 20.0% |
| !!! | TTTGACTTTTTTTTTTTGAG+AGG | - | 50560:14492-14511 | MS.gene072616:intergenic | 20.0% |
| !!! | TTTGGCAATTTTAATGATTT+TGG | - | 50560:15452-15471 | MS.gene072616:intergenic | 20.0% |
| ! | AAAGAAAAATAGCTGAAATG+AGG | - | 50560:15672-15691 | MS.gene072616:intergenic | 25.0% |
| ! | AAAGTGAGATACACTTTAAA+AGG | - | 50560:15280-15299 | MS.gene072616:intergenic | 25.0% |
| ! | AAATCAGTGGAATACAAATT+GGG | + | 50560:18452-18471 | MS.gene072616:CDS | 25.0% |
| ! | AGTAGTCTTCTATAAATCAT+AGG | + | 50560:18075-18094 | MS.gene072616:intron | 25.0% |
| ! | ATCCAATTTGATCAAAGTAT+GGG | - | 50560:16462-16481 | MS.gene072616:intergenic | 25.0% |
| ! | ATCTTCAAAATTCCAATGTA+AGG | - | 50560:16923-16942 | MS.gene072616:intergenic | 25.0% |
| ! | CAGTTAAATCTAGCAAAAAT+AGG | + | 50560:17306-17325 | MS.gene072616:intron | 25.0% |
| ! | CATTAAGCTTCATTAATAGA+AGG | + | 50560:16062-16081 | MS.gene072616:intron | 25.0% |
| ! | CTTCTATCAATACTTGATAA+AGG | - | 50560:16990-17009 | MS.gene072616:intergenic | 25.0% |
| ! | GCAGAAAATTTAATTGCAAA+AGG | - | 50560:16698-16717 | MS.gene072616:intergenic | 25.0% |
| ! | TAAGTATAGTGAGAATTTCT+TGG | - | 50560:14992-15011 | MS.gene072616:intergenic | 25.0% |
| ! | TCAATGATAAAGTCTTACTT+TGG | + | 50560:17234-17253 | MS.gene072616:intron | 25.0% |
| ! | TGGTATTTAGAAGATTTCAT+AGG | - | 50560:17285-17304 | MS.gene072616:intergenic | 25.0% |
| ! | TTGGATTGTAAATTAGATTG+TGG | + | 50560:16892-16911 | MS.gene072616:intron | 25.0% |
| !! | AAGATCTAGATATATCCTTT+TGG | + | 50560:16860-16879 | MS.gene072616:intron | 25.0% |
| !! | ACATGATTTGATAACAGATT+CGG | - | 50560:16135-16154 | MS.gene072616:intergenic | 25.0% |
| !! | TATTTTGTGAATATTCACCA+TGG | + | 50560:15891-15910 | MS.gene072616:intron | 25.0% |
| !!! | GTACTTAACAGTTCTTTTTT+AGG | - | 50560:15413-15432 | MS.gene072616:intergenic | 25.0% |
| !!! | TTTTTGCATTCATTTTGACA+TGG | + | 50560:15815-15834 | MS.gene072616:CDS | 25.0% |
| AAGACAGTGAGAGTAAATAT+TGG | + | 50560:16763-16782 | MS.gene072616:intron | 30.0% | |
| AATCAGTGGAATACAAATTG+GGG | + | 50560:18453-18472 | MS.gene072616:CDS | 30.0% | |
| ACAGTACTTATTGTATGAGA+TGG | + | 50560:17955-17974 | MS.gene072616:intron | 30.0% | |
| ACTATAGTGTCAAAGCATAT+AGG | + | 50560:16572-16591 | MS.gene072616:CDS | 30.0% | |
| AGACAGTGAGAGTAAATATT+GGG | + | 50560:16764-16783 | MS.gene072616:intron | 30.0% | |
| ATCCAACATAATCTTCCAAA+AGG | - | 50560:16878-16897 | MS.gene072616:intergenic | 30.0% | |
| ATGGCAGAAGTTTATAAGAA+CGG | + | 50560:16619-16638 | MS.gene072616:CDS | 30.0% | |
| ATTCAACTGAAAGTGAAATC+TGG | + | 50560:17626-17645 | MS.gene072616:intron | 30.0% | |
| CAAATCAGTGGAATACAAAT+TGG | + | 50560:18451-18470 | MS.gene072616:CDS | 30.0% | |
| CACCAAAAATATTGTAAGAG+AGG | + | 50560:18649-18668 | MS.gene072616:CDS | 30.0% | |
| CAGTACTTATTGTATGAGAT+GGG | + | 50560:17956-17975 | MS.gene072616:intron | 30.0% | |
| CATCCAATTTGATCAAAGTA+TGG | - | 50560:16463-16482 | MS.gene072616:intergenic | 30.0% | |
| CTATAGTGTCAAAGCATATA+GGG | + | 50560:16573-16592 | MS.gene072616:CDS | 30.0% | |
| GATAGAAAAGATAAGGTCAA+AGG | - | 50560:17750-17769 | MS.gene072616:intergenic | 30.0% | |
| GCTTAATTCTCATATTCTTC+AGG | + | 50560:13937-13956 | MS.gene072616:CDS | 30.0% | |
| GGATTTCAACAATCTATACA+CGG | + | 50560:13978-13997 | MS.gene072616:intron | 30.0% | |
| GGGAAAAGATAGAAAAGATA+AGG | - | 50560:17757-17776 | MS.gene072616:intergenic | 30.0% | |
| GTTACTTCAAGATTAAGAGA+GGG | + | 50560:18579-18598 | MS.gene072616:CDS | 30.0% | |
| TAATCTAATCTACTAACTGC+AGG | + | 50560:18553-18572 | MS.gene072616:intron | 30.0% | |
| TAGCTGAAATGAGGAAATAA+AGG | - | 50560:15663-15682 | MS.gene072616:intergenic | 30.0% | |
| TCACAGCTAAACATTACAAT+GGG | + | 50560:17438-17457 | MS.gene072616:intron | 30.0% | |
| TCGTGTCTGAATTAATTCTA+GGG | + | 50560:14755-14774 | MS.gene072616:intron | 30.0% | |
| TGATTGGACTAATTTCAATG+TGG | - | 50560:17043-17062 | MS.gene072616:intergenic | 30.0% | |
| TGTACTAACAAGTGTGTTAA+GGG | + | 50560:15060-15079 | MS.gene072616:intron | 30.0% | |
| TTAGTCACTTAAGCAATGAA+GGG | - | 50560:16388-16407 | MS.gene072616:intergenic | 30.0% | |
| TTATATGTAGTTGATCTGCA+AGG | - | 50560:14413-14432 | MS.gene072616:intergenic | 30.0% | |
| TTCGTGTCTGAATTAATTCT+AGG | + | 50560:14754-14773 | MS.gene072616:intron | 30.0% | |
| TTGTACTAACAAGTGTGTTA+AGG | + | 50560:15059-15078 | MS.gene072616:intron | 30.0% | |
| TTTAGTCACTTAAGCAATGA+AGG | - | 50560:16389-16408 | MS.gene072616:intergenic | 30.0% | |
| ! | AAGTGTTGTTGTCTAATATC+AGG | - | 50560:18365-18384 | MS.gene072616:intergenic | 30.0% |
| ! | AGCACTATTGGAAGAATTTT+AGG | + | 50560:15506-15525 | MS.gene072616:CDS | 30.0% |
| ! | ATCTTTTCTATCTTTTCCCT+TGG | + | 50560:17758-17777 | MS.gene072616:intron | 30.0% |
| ! | GCTCTTATGATCTGTATTTT+TGG | + | 50560:16416-16435 | MS.gene072616:intron | 30.0% |
| ! | TGTGTTAGAAAGTGTGTAAA+TGG | + | 50560:16523-16542 | MS.gene072616:CDS | 30.0% |
| ! | TTCACCTACTTTGTTTATGT+TGG | + | 50560:14347-14366 | MS.gene072616:intron | 30.0% |
| ! | TTTTTGCTAGATTTAACTGC+TGG | - | 50560:17305-17324 | MS.gene072616:intergenic | 30.0% |
| !! | ATCCTTTTGGAAGATTATGT+TGG | + | 50560:16873-16892 | MS.gene072616:intron | 30.0% |
| !! | ATGAGTCAAAGGTATTCTAA+CGG | - | 50560:18193-18212 | MS.gene072616:intergenic | 30.0% |
| !! | CTACATATAAGAAGTACTCT+TGG | + | 50560:14423-14442 | MS.gene072616:intron | 30.0% |
| !! | CTCGTTTCATTTTGAAAAAC+GGG | + | 50560:17790-17809 | MS.gene072616:intron | 30.0% |
| !! | GCTCGTTTCATTTTGAAAAA+CGG | + | 50560:17789-17808 | MS.gene072616:intron | 30.0% |
| !! | TAAAGTCTTACTTTGGAGTT+TGG | + | 50560:17241-17260 | MS.gene072616:intron | 30.0% |
| !! | TCGTTTCATTTTGAAAAACG+GGG | + | 50560:17791-17810 | MS.gene072616:intron | 30.0% |
| !!! | AGACATTCTTTTTTATGCAC+AGG | + | 50560:15349-15368 | MS.gene072616:intron | 30.0% |
| !!! | AGTTCCATAGACTTTTTTTC+TGG | - | 50560:17504-17523 | MS.gene072616:intergenic | 30.0% |
| !!! | ATAGATGCTGACTCTTTTTT+TGG | + | 50560:15587-15606 | MS.gene072616:intron | 30.0% |
| !!! | ATTCTTTTTTATGCACAGGT+TGG | + | 50560:15353-15372 | MS.gene072616:intron | 30.0% |
| !!! | CTCTCTTACAATATTTTTGG+TGG | - | 50560:18651-18670 | MS.gene072616:intergenic | 30.0% |
| !!! | CTTACAATATTTTTGGTGGA+AGG | - | 50560:18647-18666 | MS.gene072616:intergenic | 30.0% |
| !!! | GCTATTTTTCTTTATGTTCG+TGG | + | 50560:15679-15698 | MS.gene072616:intron | 30.0% |
| !!! | GTTCCATAGACTTTTTTTCT+GGG | - | 50560:17503-17522 | MS.gene072616:intergenic | 30.0% |
| !!! | TCTTTTTTTGGTTGTTGACA+TGG | + | 50560:15599-15618 | MS.gene072616:intron | 30.0% |
| !!! | TTCCATAGACTTTTTTTCTG+GGG | - | 50560:17502-17521 | MS.gene072616:intergenic | 30.0% |
| AAACTTCTGCCATGATATCT+TGG | - | 50560:16612-16631 | MS.gene072616:intergenic | 35.0% | |
| AAAGGAATTTGATGCAAGGA+CGG | + | 50560:15469-15488 | MS.gene072616:CDS | 35.0% | |
| AAATCTGAGAGAAAACAGAG+GGG | + | 50560:17563-17582 | MS.gene072616:intron | 35.0% | |
| AACAGTGAATGCAACTTCAA+CGG | - | 50560:16647-16666 | MS.gene072616:intergenic | 35.0% | |
| AACGAATACAAAGGAGTAAC+AGG | - | 50560:17717-17736 | MS.gene072616:intergenic | 35.0% | |
| AACTTCTGCCATGATATCTT+GGG | - | 50560:16611-16630 | MS.gene072616:intergenic | 35.0% | |
| AAGAAGGTCATTAACAGAGA+GGG | - | 50560:16253-16272 | MS.gene072616:intergenic | 35.0% | |
| AAGATGCTAAAGAGTGATCT+TGG | - | 50560:15239-15258 | MS.gene072616:intergenic | 35.0% | |
| AATACAGATCATAAGAGCCT+AGG | - | 50560:16414-16433 | MS.gene072616:intergenic | 35.0% | |
| AATGAGAGGAACGAATACAA+AGG | - | 50560:17726-17745 | MS.gene072616:intergenic | 35.0% | |
| AATTGAAGATGATGTTACCG+CGG | + | 50560:18616-18635 | MS.gene072616:CDS | 35.0% | |
| ACACACTTTCTAACACACTT+GGG | - | 50560:16520-16539 | MS.gene072616:intergenic | 35.0% | |
| ACGAATACAAAGGAGTAACA+GGG | - | 50560:17716-17735 | MS.gene072616:intergenic | 35.0% | |
| AGAAATCTGAGAGAAAACAG+AGG | + | 50560:17561-17580 | MS.gene072616:intron | 35.0% | |
| AGCTAAACATTACAATGGGT+TGG | + | 50560:17442-17461 | MS.gene072616:intron | 35.0% | |
| AGGAATTTCTACAAGCTTGA+TGG | + | 50560:17326-17345 | MS.gene072616:intron | 35.0% | |
| AGGATCAGATAAGAACTTAG+TGG | - | 50560:15723-15742 | MS.gene072616:intergenic | 35.0% | |
| AGTAACAGGGATAAGTAACA+AGG | - | 50560:17703-17722 | MS.gene072616:intergenic | 35.0% | |
| AGTGTGTGTAACCGTAAAAT+TGG | - | 50560:14141-14160 | MS.gene072616:intergenic | 35.0% | |
| ATAAAGAGGTTACAAAGCCA+TGG | - | 50560:15911-15930 | MS.gene072616:intergenic | 35.0% | |
| ATAAGGTCAAAGGAAATGAG+AGG | - | 50560:17740-17759 | MS.gene072616:intergenic | 35.0% | |
| ATCGTATGTGATTGTGTTGT+TGG | + | 50560:17138-17157 | MS.gene072616:intron | 35.0% | |
| ATTTGTTCTCTTTCGAACCA+GGG | + | 50560:16179-16198 | MS.gene072616:intron | 35.0% | |
| CAAGAGATCAAATGAGTCAA+AGG | - | 50560:18204-18223 | MS.gene072616:intergenic | 35.0% | |
| CCTCATAGTTTACTGATAAG+CGG | + | 50560:15988-16007 | MS.gene072616:intron | 35.0% | |
| CTCATAGTTTACTGATAAGC+GGG | + | 50560:15989-16008 | MS.gene072616:intron | 35.0% | |
| GAAATCTGAGAGAAAACAGA+GGG | + | 50560:17562-17581 | MS.gene072616:intron | 35.0% | |
| GACCCATACTTTGATCAAAT+TGG | + | 50560:16457-16476 | MS.gene072616:CDS | 35.0% | |
| GATAGAAGTTGAAAACTGAC+TGG | + | 50560:17002-17021 | MS.gene072616:intron | 35.0% | |
| GCTTAAGTGACTAAAATCCT+AGG | + | 50560:16394-16413 | MS.gene072616:intron | 35.0% | |
| GGAACCAACATAAACAAAGT+AGG | - | 50560:14354-14373 | MS.gene072616:intergenic | 35.0% | |
| GGGTAACATTTGCAAGAATA+AGG | + | 50560:17160-17179 | MS.gene072616:intron | 35.0% | |
| GGTTACTTCAAGATTAAGAG+AGG | + | 50560:18578-18597 | MS.gene072616:CDS | 35.0% | |
| GGTTCGAAAGAGAACAAATA+TGG | - | 50560:16178-16197 | MS.gene072616:intergenic | 35.0% | |
| GTAACAGGGATAAGTAACAA+GGG | - | 50560:17702-17721 | MS.gene072616:intergenic | 35.0% | |
| GTCACAGCTAAACATTACAA+TGG | + | 50560:17437-17456 | MS.gene072616:intron | 35.0% | |
| GTCTTCTATAAATCATAGGC+AGG | + | 50560:18079-18098 | MS.gene072616:intron | 35.0% | |
| GTGATCTTGGACATAAGTTA+AGG | - | 50560:15226-15245 | MS.gene072616:intergenic | 35.0% | |
| GTGTAAATGGAAACCAGATT+TGG | + | 50560:16536-16555 | MS.gene072616:CDS | 35.0% | |
| TAAAGGAATCACCTGATCTT+TGG | - | 50560:15646-15665 | MS.gene072616:intergenic | 35.0% | |
| TACACACTTTCTAACACACT+TGG | - | 50560:16521-16540 | MS.gene072616:intergenic | 35.0% | |
| TACCCCAGAAAAAAAGTCTA+TGG | + | 50560:17497-17516 | MS.gene072616:intron | 35.0% | |
| TAGTGTTAGAACAAAAACCC+TGG | - | 50560:16199-16218 | MS.gene072616:intergenic | 35.0% | |
| TATTTGTTCTCTTTCGAACC+AGG | + | 50560:16178-16197 | MS.gene072616:intron | 35.0% | |
| TCCAATCATCATTTAAGCGT+AGG | + | 50560:17055-17074 | MS.gene072616:intron | 35.0% | |
| TCTCAGATTTCTCTTACTAG+TGG | - | 50560:17553-17572 | MS.gene072616:intergenic | 35.0% | |
| TGAAATCCAAACGTTGATCA+TGG | - | 50560:13966-13985 | MS.gene072616:intergenic | 35.0% | |
| TGGCAGAAGTTTATAAGAAC+GGG | + | 50560:16620-16639 | MS.gene072616:CDS | 35.0% | |
| TTCTCTTACTAGTGTCCTTA+GGG | - | 50560:15110-15129 | MS.gene072616:intergenic | 35.0% | |
| TTTCTCTTACTAGTGTCCTT+AGG | - | 50560:15111-15130 | MS.gene072616:intergenic | 35.0% | |
| ! | AAGTTGAAAACTGACTGGTT+TGG | + | 50560:17007-17026 | MS.gene072616:intron | 35.0% |
| ! | AGACACGAATATCTTGCTTT+TGG | - | 50560:14743-14762 | MS.gene072616:intergenic | 35.0% |
| ! | ATTGTGGATTGACCTTACAT+TGG | + | 50560:16908-16927 | MS.gene072616:intron | 35.0% |
| ! | GATTTTGCTCACTACAAATC+AGG | + | 50560:18228-18247 | MS.gene072616:CDS | 35.0% |
| ! | GATTTTGGATGAGTTACAAC+AGG | - | 50560:15437-15456 | MS.gene072616:intergenic | 35.0% |
| ! | GCTAAACATTACAATGGGTT+GGG | + | 50560:17443-17462 | MS.gene072616:intron | 35.0% |
| ! | TATGATCATCATTTTCTCGC+AGG | + | 50560:14046-14065 | MS.gene072616:intron | 35.0% |
| ! | TCCTCGTTTCTCCAATTTTA+CGG | + | 50560:14127-14146 | MS.gene072616:CDS | 35.0% |
| ! | TCGTATGTGATTGTGTTGTT+GGG | + | 50560:17139-17158 | MS.gene072616:intron | 35.0% |
| ! | TCTATACACGGTTGATTTCA+TGG | + | 50560:13990-14009 | MS.gene072616:intron | 35.0% |
| ! | TGTCGTCTTTTGTGCTTTTA+GGG | + | 50560:17820-17839 | MS.gene072616:intron | 35.0% |
| ! | TTGTCGTCTTTTGTGCTTTT+AGG | + | 50560:17819-17838 | MS.gene072616:intron | 35.0% |
| !! | CGTTTCATTTTGAAAAACGG+GGG | + | 50560:17792-17811 | MS.gene072616:intron | 35.0% |
| !! | CTCATGTTGATGATGATTCA+GGG | + | 50560:15741-15760 | MS.gene072616:intron | 35.0% |
| !! | TCATCAAAAAAAGTGCCCTA+AGG | + | 50560:15092-15111 | MS.gene072616:intron | 35.0% |
| !! | TTAAGCGTAGGCTATTTCTT+TGG | + | 50560:17067-17086 | MS.gene072616:intron | 35.0% |
| !!! | AGTTGCATTCACTGTTTTTG+AGG | + | 50560:16651-16670 | MS.gene072616:CDS | 35.0% |
| !!! | TTTTTCTGGGGTAACATGAT+TGG | - | 50560:17490-17509 | MS.gene072616:intergenic | 35.0% |
| AATCTGAGAGAAAACAGAGG+GGG | + | 50560:17564-17583 | MS.gene072616:intron | 40.0% | |
| AATGTTCTAGCAAGCTCAAG+CGG | - | 50560:16019-16038 | MS.gene072616:intergenic | 40.0% | |
| ACAGATTAACGAAAACCCAG+AGG | + | 50560:14082-14101 | MS.gene072616:CDS | 40.0% | |
| ACAGTGAATGCAACTTCAAC+GGG | - | 50560:16646-16665 | MS.gene072616:intergenic | 40.0% | |
| ACCGTAAAATTGGAGAAACG+AGG | - | 50560:14131-14150 | MS.gene072616:intergenic | 40.0% | |
| ACTTCTGCCATGATATCTTG+GGG | - | 50560:16610-16629 | MS.gene072616:intergenic | 40.0% | |
| AGGTAACCATGATCAACGTT+TGG | + | 50560:13957-13976 | MS.gene072616:intron | 40.0% | |
| ATAACCTAGGGCAGTAGTTA+AGG | - | 50560:15018-15037 | MS.gene072616:intergenic | 40.0% | |
| ATGGAAACCAGATTTGGAAG+AGG | + | 50560:16542-16561 | MS.gene072616:CDS | 40.0% | |
| ATTGAAGATGATGTTACCGC+GGG | + | 50560:18617-18636 | MS.gene072616:CDS | 40.0% | |
| ATTTCCTTAACTACTGCCCT+AGG | + | 50560:15011-15030 | MS.gene072616:intron | 40.0% | |
| CAAGAAGGTCATTAACAGAG+AGG | - | 50560:16254-16273 | MS.gene072616:intergenic | 40.0% | |
| CAGTGAGAGTAAATATTGGG+AGG | + | 50560:16767-16786 | MS.gene072616:intron | 40.0% | |
| CCGCTTATCAGTAAACTATG+AGG | - | 50560:15991-16010 | MS.gene072616:intergenic | 40.0% | |
| CCTGAATCATCATCAACATG+AGG | - | 50560:15743-15762 | MS.gene072616:intergenic | 40.0% | |
| CTGAAGTTGCTTAAACGTTG+GGG | - | 50560:18009-18028 | MS.gene072616:intergenic | 40.0% | |
| CTGATCTTTGGTGAGGAAAT+CGG | - | 50560:15634-15653 | MS.gene072616:intergenic | 40.0% | |
| GACTCATTTGATCTCTTGAC+AGG | + | 50560:18206-18225 | MS.gene072616:intron | 40.0% | |
| GATCCATGGAACACACAATT+AGG | - | 50560:17982-18001 | MS.gene072616:intergenic | 40.0% | |
| GCCTACGCTTAAATGATGAT+TGG | - | 50560:17059-17078 | MS.gene072616:intergenic | 40.0% | |
| GCTGAAGTTGCTTAAACGTT+GGG | - | 50560:18010-18029 | MS.gene072616:intergenic | 40.0% | |
| GGAGTTTACAAACACATCAC+AGG | + | 50560:18249-18268 | MS.gene072616:CDS | 40.0% | |
| GTAGTCAGCGATAAGAGAAA+GGG | + | 50560:17348-17367 | MS.gene072616:intron | 40.0% | |
| GTCATGCAGTAAAGCTGATT+GGG | + | 50560:18286-18305 | MS.gene072616:CDS | 40.0% | |
| GTCCTTGCATCAAATTCCTT+TGG | - | 50560:15470-15489 | MS.gene072616:intergenic | 40.0% | |
| GTGTGTGAGTAGAGATAAAG+AGG | - | 50560:15925-15944 | MS.gene072616:intergenic | 40.0% | |
| TAGTCAGCGATAAGAGAAAG+GGG | + | 50560:17349-17368 | MS.gene072616:intron | 40.0% | |
| TCAGCAGACTTATGAGTCAT+TGG | + | 50560:18025-18044 | MS.gene072616:intron | 40.0% | |
| TGAAGTTGCTTAAACGTTGG+GGG | - | 50560:18008-18027 | MS.gene072616:intergenic | 40.0% | |
| TGCCAAAGGAATTTGATGCA+AGG | + | 50560:15465-15484 | MS.gene072616:CDS | 40.0% | |
| TGCTGAAGTTGCTTAAACGT+TGG | - | 50560:18011-18030 | MS.gene072616:intergenic | 40.0% | |
| TTCAGCTTCTTGCAAATCAG+TGG | + | 50560:18439-18458 | MS.gene072616:intron | 40.0% | |
| TTGGGAGAATGCTTTGTGTT+CGG | + | 50560:17461-17480 | MS.gene072616:intron | 40.0% | |
| TTGGTTCCAATCTCTGTGAT+AGG | + | 50560:14366-14385 | MS.gene072616:intron | 40.0% | |
| ! | CGTATGTGATTGTGTTGTTG+GGG | + | 50560:17140-17159 | MS.gene072616:intron | 40.0% |
| ! | CTAGTTGTTATTAGTGCCCT+CGG | - | 50560:14798-14817 | MS.gene072616:intergenic | 40.0% |
| ! | GTCGTCTTTTGTGCTTTTAG+GGG | + | 50560:17821-17840 | MS.gene072616:intron | 40.0% |
| ! | TATTCTAACGGATGCGAGAA+TGG | - | 50560:18181-18200 | MS.gene072616:intergenic | 40.0% |
| ! | TCGTCTTTTGTGCTTTTAGG+GGG | + | 50560:17822-17841 | MS.gene072616:intron | 40.0% |
| !! | AAACGAGCACTGAAAACCAA+GGG | - | 50560:17777-17796 | MS.gene072616:intergenic | 40.0% |
| !! | CATCGCTTTTGTGCTGTATA+TGG | + | 50560:18108-18127 | MS.gene072616:intron | 40.0% |
| !! | CCTCATGTTGATGATGATTC+AGG | + | 50560:15740-15759 | MS.gene072616:intron | 40.0% |
| AAGAGAGGGACAAACGAATG+TGG | + | 50560:18593-18612 | MS.gene072616:CDS | 45.0% | |
| AATGACCTTCTTGCATGCTG+TGG | + | 50560:16261-16280 | MS.gene072616:CDS | 45.0% | |
| AATTTGATGCAAGGACGGCT+TGG | + | 50560:15474-15493 | MS.gene072616:CDS | 45.0% | |
| ACAGGGATAAGTAACAAGGG+TGG | - | 50560:17699-17718 | MS.gene072616:intergenic | 45.0% | |
| AGTCAGCGATAAGAGAAAGG+GGG | + | 50560:17350-17369 | MS.gene072616:intron | 45.0% | |
| AGTCCACCTATCACAGAGAT+TGG | - | 50560:14375-14394 | MS.gene072616:intergenic | 45.0% | |
| ATATTGGGAGGCTCTGTTCA+AGG | + | 50560:16779-16798 | MS.gene072616:intron | 45.0% | |
| ATGATGATTCAGGGTCACTG+CGG | + | 50560:15750-15769 | MS.gene072616:intron | 45.0% | |
| ATGCAGTAAAGCTGATTGGG+TGG | + | 50560:18289-18308 | MS.gene072616:CDS | 45.0% | |
| ATGCTGTGGATTTCTCTGTG+GGG | + | 50560:16275-16294 | MS.gene072616:CDS | 45.0% | |
| ATTAACGAAAACCCAGAGGC+AGG | + | 50560:14086-14105 | MS.gene072616:CDS | 45.0% | |
| CAAATTGGATGTTCTCACCC+TGG | + | 50560:16472-16491 | MS.gene072616:CDS | 45.0% | |
| CACTTGGGAGTTTGATATGC+TGG | - | 50560:16505-16524 | MS.gene072616:intergenic | 45.0% | |
| CATGCTGTGGATTTCTCTGT+GGG | + | 50560:16274-16293 | MS.gene072616:CDS | 45.0% | |
| CCTCTTGAAAGAGGAACTAC+GGG | + | 50560:15961-15980 | MS.gene072616:intron | 45.0% | |
| CGATTTCCTCACCAAAGATC+AGG | + | 50560:15632-15651 | MS.gene072616:intron | 45.0% | |
| CGTGGTTCACTGTGTTTCTT+TGG | + | 50560:15697-15716 | MS.gene072616:intron | 45.0% | |
| CTAATCTACTAACTGCAGGC+TGG | + | 50560:18557-18576 | MS.gene072616:intron | 45.0% | |
| CTACTCACACACCTACTTGA+GGG | + | 50560:15933-15952 | MS.gene072616:intron | 45.0% | |
| GAAATCCACAGCATGCAAGA+AGG | - | 50560:16269-16288 | MS.gene072616:intergenic | 45.0% | |
| GAATCACCTGATCTTTGGTG+AGG | - | 50560:15641-15660 | MS.gene072616:intergenic | 45.0% | |
| GCCTCTTGAAAGAGGAACTA+CGG | + | 50560:15960-15979 | MS.gene072616:intron | 45.0% | |
| GCTTTGACCTCTTCCAAATC+TGG | - | 50560:16552-16571 | MS.gene072616:intergenic | 45.0% | |
| GGACAATTTAAGCGCCTTCT+TGG | + | 50560:15374-15393 | MS.gene072616:CDS | 45.0% | |
| GGTAGTCAGCGATAAGAGAA+AGG | + | 50560:17347-17366 | MS.gene072616:intron | 45.0% | |
| GGTCATGCAGTAAAGCTGAT+TGG | + | 50560:18285-18304 | MS.gene072616:CDS | 45.0% | |
| GTCTGATCCCCAAGATATCA+TGG | + | 50560:16600-16619 | MS.gene072616:CDS | 45.0% | |
| GTGCTTGTTTGACTCCAAGA+AGG | - | 50560:15391-15410 | MS.gene072616:intergenic | 45.0% | |
| GTTCCAATCTCTGTGATAGG+TGG | + | 50560:14369-14388 | MS.gene072616:intron | 45.0% | |
| TACTCACACACCTACTTGAG+GGG | + | 50560:15934-15953 | MS.gene072616:intron | 45.0% | |
| TAGTTTACTGATAAGCGGGC+AGG | + | 50560:15993-16012 | MS.gene072616:intron | 45.0% | |
| TCTACTCACACACCTACTTG+AGG | + | 50560:15932-15951 | MS.gene072616:intron | 45.0% | |
| TGATGAAGGGGAGGACTATT+GGG | + | 50560:18320-18339 | MS.gene072616:CDS | 45.0% | |
| TGCAGTAAAGCTGATTGGGT+GGG | + | 50560:18290-18309 | MS.gene072616:CDS | 45.0% | |
| ! | AAGTATCGCCACGCATAAAG+TGG | - | 50560:16321-16340 | MS.gene072616:intergenic | 45.0% |
| ! | GCTTTTGTGCTGTATATGGC+TGG | + | 50560:18112-18131 | MS.gene072616:intron | 45.0% |
| !! | GAAACGAGCACTGAAAACCA+AGG | - | 50560:17778-17797 | MS.gene072616:intergenic | 45.0% |
| !! | TCTTTTGTGCTTTTAGGGGG+CGG | + | 50560:17825-17844 | MS.gene072616:intron | 45.0% |
| ATCACAGGTTCTGCACTAGG+TGG | + | 50560:18264-18283 | MS.gene072616:CDS | 50.0% | |
| CACATCACAGGTTCTGCACT+AGG | + | 50560:18261-18280 | MS.gene072616:CDS | 50.0% | |
| CATGCTTACTAGTGCTCCGA+GGG | + | 50560:14779-14798 | MS.gene072616:intron | 50.0% | |
| CCCGTAGTTCCTCTTTCAAG+AGG | - | 50560:15964-15983 | MS.gene072616:intergenic | 50.0% | |
| CCTCTTCAGTGACAACACCA+TGG | - | 50560:16350-16369 | MS.gene072616:intergenic | 50.0% | |
| GCAGTAAAGCTGATTGGGTG+GGG | + | 50560:18291-18310 | MS.gene072616:CDS | 50.0% | |
| GCATGCTGTGGATTTCTCTG+TGG | + | 50560:16273-16292 | MS.gene072616:CDS | 50.0% | |
| GGGCCTAATTGTGTGTTCCA+TGG | + | 50560:17976-17995 | MS.gene072616:intron | 50.0% | |
| GGTGGGGAACAAGTGATGAA+GGG | + | 50560:18307-18326 | MS.gene072616:CDS | 50.0% | |
| GTGATGAAGGGGAGGACTAT+TGG | + | 50560:18319-18338 | MS.gene072616:CDS | 50.0% | |
| GTGGGGAACAAGTGATGAAG+GGG | + | 50560:18308-18327 | MS.gene072616:CDS | 50.0% | |
| TCATGCTTACTAGTGCTCCG+AGG | + | 50560:14778-14797 | MS.gene072616:intron | 50.0% | |
| TGAGAGAAAACAGAGGGGGT+GGG | + | 50560:17568-17587 | MS.gene072616:intron | 50.0% | |
| TGCGGTTCTTGTTGGGCATT+TGG | + | 50560:15768-15787 | MS.gene072616:CDS | 50.0% | |
| TGGCGATACTTAGCTCACCA+TGG | + | 50560:16330-16349 | MS.gene072616:CDS | 50.0% | |
| TGGTCGCAGTGTAGCACTAT+TGG | + | 50560:15494-15513 | MS.gene072616:CDS | 50.0% | |
| TTTGGTGGAAGGTAAACCCG+CGG | - | 50560:18636-18655 | MS.gene072616:intergenic | 50.0% | |
| ! | GTCGGAGGTGTAGGCAAAAT+TGG | + | 50560:16109-16128 | MS.gene072616:intron | 50.0% |
| !! | CCATGGTGTTGTCACTGAAG+AGG | + | 50560:16347-16366 | MS.gene072616:CDS | 50.0% |
| !! | GATATGCTGGCTCACAACCA+GGG | - | 50560:16492-16511 | MS.gene072616:intergenic | 50.0% |
| !! | GGCGGATTGACTTAGGAGTT+AGG | + | 50560:17843-17862 | MS.gene072616:intron | 50.0% |
| !! | TGATATGCTGGCTCACAACC+AGG | - | 50560:16493-16512 | MS.gene072616:intergenic | 50.0% |
| !! | TTTAGGGGGCGGATTGACTT+AGG | + | 50560:17836-17855 | MS.gene072616:intron | 50.0% |
| AAGAGGCAAGCCCCTCAAGT+AGG | - | 50560:15947-15966 | MS.gene072616:intergenic | 55.0% | |
| ACGAAAACCCAGAGGCAGGA+TGG | + | 50560:14090-14109 | MS.gene072616:CDS | 55.0% | |
| AGGGGCTTGCCTCTTGAAAG+AGG | + | 50560:15952-15971 | MS.gene072616:intron | 55.0% | |
| AGGGTCACTGCGGTTCTTGT+TGG | + | 50560:15760-15779 | MS.gene072616:intron | 55.0% | |
| CAGCCAAGCCACTCTGTAGT+CGG | + | 50560:16091-16110 | MS.gene072616:intron | 55.0% | |
| CGAAAACCCAGAGGCAGGAT+GGG | + | 50560:14091-14110 | MS.gene072616:CDS | 55.0% | |
| CTACACCTCCGACTACAGAG+TGG | - | 50560:16102-16121 | MS.gene072616:intergenic | 55.0% | |
| CTGAGAGAAAACAGAGGGGG+TGG | + | 50560:17567-17586 | MS.gene072616:intron | 55.0% | |
| GGGAACAAGTGATGAAGGGG+AGG | + | 50560:18311-18330 | MS.gene072616:CDS | 55.0% | |
| GGGTCACTGCGGTTCTTGTT+GGG | + | 50560:15761-15780 | MS.gene072616:intron | 55.0% | |
| GGGTGGGGAACAAGTGATGA+AGG | + | 50560:18306-18325 | MS.gene072616:CDS | 55.0% | |
| TGTGGATTTCTCTGTGGGGC+TGG | + | 50560:16279-16298 | MS.gene072616:CDS | 55.0% | |
| ! | AACGTTGGGGGTGTGATCCA+TGG | - | 50560:17996-18015 | MS.gene072616:intergenic | 55.0% |
| ! | CACTCTGTAGTCGGAGGTGT+AGG | + | 50560:16100-16119 | MS.gene072616:intron | 55.0% |
| AAACCCAGAGGCAGGATGGG+AGG | + | 50560:14094-14113 | MS.gene072616:CDS | 60.0% | |
| CCAAGCCACTCTGTAGTCGG+AGG | + | 50560:16094-16113 | MS.gene072616:intron | 60.0% | |
| CCTCCGACTACAGAGTGGCT+TGG | - | 50560:16097-16116 | MS.gene072616:intergenic | 60.0% | |
| GGGGGACTCCACTTTATGCG+TGG | + | 50560:16310-16329 | MS.gene072616:CDS | 60.0% | |
| !! | TCTGTGGGGCTGGCTGTGAT+GGG | + | 50560:16289-16308 | MS.gene072616:CDS | 60.0% |
| CAGCCTCCCATCCTGCCTCT+GGG | - | 50560:14100-14119 | MS.gene072616:intergenic | 65.0% | |
| !! | CTCTGTGGGGCTGGCTGTGA+TGG | + | 50560:16288-16307 | MS.gene072616:CDS | 65.0% |
| !! | CTGTGGGGCTGGCTGTGATG+GGG | + | 50560:16290-16309 | MS.gene072616:CDS | 65.0% |
| !! | TGTGGGGCTGGCTGTGATGG+GGG | + | 50560:16291-16310 | MS.gene072616:CDS | 65.0% |
| GCAGCCTCCCATCCTGCCTC+TGG | - | 50560:14101-14120 | MS.gene072616:intergenic | 70.0% | |
| !! | GTGGGGCTGGCTGTGATGGG+GGG | + | 50560:16292-16311 | MS.gene072616:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 50560 | gene | 13911 | 18670 | 13911 | ID=MS.gene072616 |
| 50560 | mRNA | 13911 | 18670 | 13911 | ID=MS.gene072616.t1;Parent=MS.gene072616 |
| 50560 | exon | 13911 | 13958 | 13911 | ID=MS.gene072616.t1.exon1;Parent=MS.gene072616.t1 |
| 50560 | CDS | 13911 | 13958 | 13911 | ID=cds.MS.gene072616.t1;Parent=MS.gene072616.t1 |
| 50560 | exon | 14068 | 14148 | 14068 | ID=MS.gene072616.t1.exon2;Parent=MS.gene072616.t1 |
| 50560 | CDS | 14068 | 14148 | 14068 | ID=cds.MS.gene072616.t1;Parent=MS.gene072616.t1 |
| 50560 | exon | 15371 | 15527 | 15371 | ID=MS.gene072616.t1.exon3;Parent=MS.gene072616.t1 |
| 50560 | CDS | 15371 | 15527 | 15371 | ID=cds.MS.gene072616.t1;Parent=MS.gene072616.t1 |
| 50560 | exon | 15649 | 15653 | 15649 | ID=MS.gene072616.t1.exon4;Parent=MS.gene072616.t1 |
| 50560 | CDS | 15649 | 15653 | 15649 | ID=cds.MS.gene072616.t1;Parent=MS.gene072616.t1 |
| 50560 | exon | 15762 | 15836 | 15762 | ID=MS.gene072616.t1.exon5;Parent=MS.gene072616.t1 |
| 50560 | CDS | 15762 | 15836 | 15762 | ID=cds.MS.gene072616.t1;Parent=MS.gene072616.t1 |
| 50560 | exon | 16243 | 16368 | 16243 | ID=MS.gene072616.t1.exon6;Parent=MS.gene072616.t1 |
| 50560 | CDS | 16243 | 16368 | 16243 | ID=cds.MS.gene072616.t1;Parent=MS.gene072616.t1 |
| 50560 | exon | 16454 | 16672 | 16454 | ID=MS.gene072616.t1.exon7;Parent=MS.gene072616.t1 |
| 50560 | CDS | 16454 | 16672 | 16454 | ID=cds.MS.gene072616.t1;Parent=MS.gene072616.t1 |
| 50560 | exon | 18228 | 18341 | 18228 | ID=MS.gene072616.t1.exon8;Parent=MS.gene072616.t1 |
| 50560 | CDS | 18228 | 18341 | 18228 | ID=cds.MS.gene072616.t1;Parent=MS.gene072616.t1 |
| 50560 | exon | 18444 | 18479 | 18444 | ID=MS.gene072616.t1.exon9;Parent=MS.gene072616.t1 |
| 50560 | CDS | 18444 | 18479 | 18444 | ID=cds.MS.gene072616.t1;Parent=MS.gene072616.t1 |
| 50560 | exon | 18575 | 18670 | 18575 | ID=MS.gene072616.t1.exon10;Parent=MS.gene072616.t1 |
| 50560 | CDS | 18575 | 18670 | 18575 | ID=cds.MS.gene072616.t1;Parent=MS.gene072616.t1 |
| Gene Sequence |
| Protein sequence |
