Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072617.t1 | ABD32840.1 | 96.4 | 333 | 7 | 1 | 1 | 328 | 22 | 354 | 2.40E-193 | 684.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072617.t1 | Q93VC9 | 76.0 | 317 | 76 | 0 | 8 | 324 | 39 | 355 | 7.3e-154 | 544.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072617.t1 | B7FJ05 | 96.4 | 333 | 7 | 1 | 1 | 328 | 24 | 356 | 1.8e-193 | 684.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072618 | MS.gene072617 | PPI |
| MS.gene071430 | MS.gene072617 | PPI |
| MS.gene050819 | MS.gene072617 | PPI |
| MS.gene072617 | MS.gene22772 | PPI |
| MS.gene28614 | MS.gene072617 | PPI |
| MS.gene072617 | MS.gene071429 | PPI |
| MS.gene072617 | MS.gene072616 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072617.t1 | MTR_7g111060 | 96.396 | 333 | 7 | 1 | 1 | 328 | 24 | 356 | 0.0 | 673 |
| MS.gene072617.t1 | MTR_7g111050 | 87.915 | 331 | 36 | 1 | 1 | 327 | 22 | 352 | 0.0 | 617 |
| MS.gene072617.t1 | MTR_7g111050 | 86.786 | 280 | 33 | 1 | 1 | 276 | 17 | 296 | 0.0 | 518 |
| MS.gene072617.t1 | MTR_4g125300 | 32.975 | 279 | 152 | 9 | 30 | 302 | 91 | 340 | 4.35e-34 | 128 |
| MS.gene072617.t1 | MTR_4g094918 | 29.091 | 275 | 162 | 11 | 38 | 302 | 82 | 333 | 1.99e-26 | 107 |
| MS.gene072617.t1 | MTR_7g079230 | 29.344 | 259 | 152 | 6 | 65 | 317 | 107 | 340 | 1.04e-25 | 105 |
| MS.gene072617.t1 | MTR_7g078600 | 31.140 | 228 | 128 | 6 | 81 | 302 | 125 | 329 | 4.77e-25 | 103 |
| MS.gene072617.t1 | MTR_3g075390 | 27.941 | 272 | 168 | 9 | 38 | 302 | 86 | 336 | 5.81e-25 | 103 |
| MS.gene072617.t1 | MTR_2g015850 | 28.148 | 270 | 165 | 8 | 38 | 302 | 110 | 355 | 2.01e-24 | 102 |
| MS.gene072617.t1 | MTR_1g023210 | 28.025 | 314 | 179 | 13 | 10 | 307 | 75 | 357 | 6.26e-24 | 100 |
| MS.gene072617.t1 | MTR_4g071060 | 29.371 | 286 | 159 | 12 | 38 | 307 | 95 | 353 | 1.95e-23 | 99.4 |
| MS.gene072617.t1 | MTR_4g107930 | 28.400 | 250 | 145 | 9 | 61 | 302 | 113 | 336 | 5.14e-23 | 98.2 |
| MS.gene072617.t1 | MTR_4g104370 | 27.354 | 223 | 136 | 7 | 85 | 302 | 134 | 335 | 6.07e-23 | 98.2 |
| MS.gene072617.t1 | MTR_3g102220 | 28.315 | 279 | 159 | 12 | 38 | 302 | 102 | 353 | 6.58e-23 | 99.4 |
| MS.gene072617.t1 | MTR_2g083930 | 28.253 | 269 | 160 | 7 | 40 | 302 | 94 | 335 | 7.55e-23 | 97.4 |
| MS.gene072617.t1 | MTR_1g107550 | 28.125 | 288 | 172 | 12 | 38 | 315 | 98 | 360 | 7.56e-23 | 99.0 |
| MS.gene072617.t1 | MTR_4g047610 | 28.112 | 249 | 147 | 8 | 61 | 302 | 111 | 334 | 9.65e-23 | 97.4 |
| MS.gene072617.t1 | MTR_5g022560 | 27.711 | 249 | 148 | 8 | 61 | 302 | 112 | 335 | 1.47e-22 | 96.7 |
| MS.gene072617.t1 | MTR_2g090890 | 26.786 | 280 | 169 | 10 | 35 | 307 | 83 | 333 | 2.08e-22 | 96.3 |
| MS.gene072617.t1 | MTR_4g079470 | 29.333 | 225 | 131 | 7 | 85 | 302 | 133 | 336 | 2.12e-22 | 96.3 |
| MS.gene072617.t1 | MTR_4g079770 | 29.333 | 225 | 131 | 7 | 85 | 302 | 133 | 336 | 3.38e-22 | 95.9 |
| MS.gene072617.t1 | MTR_4g079440 | 28.205 | 273 | 161 | 9 | 41 | 302 | 88 | 336 | 1.07e-21 | 94.4 |
| MS.gene072617.t1 | MTR_2g015920 | 30.932 | 236 | 133 | 8 | 68 | 299 | 134 | 343 | 1.20e-21 | 94.7 |
| MS.gene072617.t1 | MTR_4g079800 | 28.194 | 227 | 131 | 7 | 85 | 302 | 133 | 336 | 2.44e-21 | 93.2 |
| MS.gene072617.t1 | MTR_4g080730 | 27.473 | 273 | 165 | 10 | 39 | 305 | 89 | 334 | 4.67e-21 | 92.4 |
| MS.gene072617.t1 | MTR_4g080700 | 27.473 | 273 | 165 | 10 | 39 | 305 | 89 | 334 | 5.92e-21 | 92.0 |
| MS.gene072617.t1 | MTR_4g080360 | 29.694 | 229 | 132 | 8 | 81 | 302 | 127 | 333 | 7.53e-21 | 92.0 |
| MS.gene072617.t1 | MTR_3g116080 | 28.413 | 271 | 161 | 12 | 39 | 302 | 95 | 339 | 7.74e-20 | 89.4 |
| MS.gene072617.t1 | MTR_1g018840 | 28.470 | 281 | 156 | 13 | 38 | 302 | 102 | 353 | 1.35e-19 | 89.7 |
| MS.gene072617.t1 | MTR_1g018840 | 28.470 | 281 | 156 | 13 | 38 | 302 | 102 | 353 | 1.79e-19 | 89.0 |
| MS.gene072617.t1 | MTR_2g067900 | 25.796 | 314 | 193 | 11 | 3 | 302 | 30 | 317 | 2.00e-18 | 84.7 |
| MS.gene072617.t1 | MTR_1g023810 | 28.000 | 250 | 146 | 10 | 60 | 302 | 33 | 255 | 1.19e-16 | 79.0 |
| MS.gene072617.t1 | MTR_2g075830 | 29.075 | 227 | 129 | 7 | 85 | 302 | 129 | 332 | 1.54e-16 | 79.7 |
| MS.gene072617.t1 | MTR_2g064475 | 28.444 | 225 | 119 | 11 | 82 | 295 | 138 | 331 | 3.56e-16 | 78.6 |
| MS.gene072617.t1 | MTR_2g015930 | 29.412 | 221 | 125 | 8 | 85 | 299 | 148 | 343 | 4.34e-16 | 78.6 |
| MS.gene072617.t1 | MTR_1g094135 | 27.778 | 252 | 140 | 10 | 75 | 310 | 141 | 366 | 1.19e-15 | 77.4 |
| MS.gene072617.t1 | MTR_2g015840 | 40.909 | 88 | 50 | 2 | 214 | 301 | 173 | 258 | 1.40e-14 | 73.2 |
| MS.gene072617.t1 | MTR_7g079130 | 41.463 | 82 | 42 | 3 | 226 | 302 | 9 | 89 | 1.39e-13 | 66.2 |
| MS.gene072617.t1 | MTR_7g078580 | 36.957 | 92 | 49 | 3 | 217 | 302 | 5 | 93 | 1.81e-12 | 63.9 |
| MS.gene072617.t1 | MTR_8g086470 | 27.273 | 231 | 130 | 10 | 75 | 299 | 141 | 339 | 1.96e-11 | 64.7 |
| MS.gene072617.t1 | MTR_4g065077 | 27.273 | 231 | 130 | 10 | 75 | 299 | 141 | 339 | 2.17e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072617.t1 | AT1G02305 | 75.155 | 322 | 80 | 0 | 3 | 324 | 34 | 355 | 0.0 | 533 |
| MS.gene072617.t1 | AT4G01610 | 75.633 | 316 | 77 | 0 | 3 | 318 | 31 | 346 | 0.0 | 522 |
| MS.gene072617.t1 | AT4G01610 | 75.000 | 316 | 79 | 0 | 3 | 318 | 31 | 346 | 0.0 | 516 |
| MS.gene072617.t1 | AT1G02300 | 66.472 | 343 | 95 | 1 | 2 | 324 | 30 | 372 | 1.81e-174 | 489 |
| MS.gene072617.t1 | AT5G60360 | 32.103 | 271 | 150 | 10 | 38 | 302 | 106 | 348 | 3.03e-29 | 115 |
| MS.gene072617.t1 | AT3G45310 | 32.117 | 274 | 146 | 10 | 38 | 302 | 106 | 348 | 3.16e-29 | 115 |
| MS.gene072617.t1 | AT3G19400 | 29.126 | 309 | 182 | 12 | 24 | 320 | 79 | 362 | 6.44e-29 | 114 |
| MS.gene072617.t1 | AT5G60360 | 30.333 | 300 | 173 | 12 | 9 | 301 | 77 | 347 | 3.98e-28 | 112 |
| MS.gene072617.t1 | AT3G45310 | 31.985 | 272 | 145 | 10 | 38 | 300 | 106 | 346 | 4.78e-28 | 112 |
| MS.gene072617.t1 | AT5G60360 | 31.599 | 269 | 150 | 10 | 38 | 300 | 106 | 346 | 1.10e-27 | 111 |
| MS.gene072617.t1 | AT3G43960 | 28.417 | 278 | 175 | 9 | 24 | 299 | 76 | 331 | 1.99e-26 | 108 |
| MS.gene072617.t1 | AT4G36880 | 28.276 | 290 | 177 | 10 | 38 | 318 | 102 | 369 | 6.24e-26 | 106 |
| MS.gene072617.t1 | AT3G19390 | 28.622 | 283 | 169 | 11 | 27 | 302 | 81 | 337 | 1.07e-24 | 104 |
| MS.gene072617.t1 | AT1G29080 | 28.333 | 300 | 180 | 10 | 5 | 295 | 53 | 326 | 6.03e-24 | 100 |
| MS.gene072617.t1 | AT4G23520 | 30.657 | 274 | 154 | 12 | 38 | 302 | 95 | 341 | 7.91e-24 | 100 |
| MS.gene072617.t1 | AT3G48340 | 27.698 | 278 | 162 | 11 | 38 | 302 | 84 | 335 | 1.96e-23 | 99.4 |
| MS.gene072617.t1 | AT5G43060 | 29.197 | 274 | 156 | 13 | 38 | 302 | 101 | 345 | 4.17e-22 | 97.1 |
| MS.gene072617.t1 | AT3G49340 | 27.305 | 282 | 175 | 9 | 19 | 295 | 65 | 321 | 1.14e-21 | 94.4 |
| MS.gene072617.t1 | AT1G09850 | 27.508 | 309 | 186 | 13 | 4 | 302 | 45 | 325 | 1.38e-21 | 95.1 |
| MS.gene072617.t1 | AT1G47128 | 26.909 | 275 | 162 | 11 | 38 | 302 | 99 | 344 | 1.51e-21 | 95.1 |
| MS.gene072617.t1 | AT4G39090 | 28.472 | 288 | 160 | 12 | 38 | 307 | 98 | 357 | 2.23e-21 | 94.0 |
| MS.gene072617.t1 | AT2G21430 | 28.669 | 293 | 165 | 12 | 38 | 313 | 95 | 360 | 3.69e-21 | 93.2 |
| MS.gene072617.t1 | AT5G50260 | 25.436 | 287 | 178 | 10 | 38 | 313 | 84 | 345 | 4.95e-21 | 92.8 |
| MS.gene072617.t1 | AT4G35350 | 28.417 | 278 | 153 | 12 | 39 | 302 | 99 | 344 | 5.75e-21 | 92.4 |
| MS.gene072617.t1 | AT4G16190 | 28.819 | 288 | 161 | 11 | 38 | 307 | 102 | 363 | 1.96e-20 | 91.3 |
| MS.gene072617.t1 | AT2G34080 | 30.986 | 213 | 122 | 6 | 85 | 295 | 136 | 325 | 2.43e-20 | 90.5 |
| MS.gene072617.t1 | AT1G20850 | 27.839 | 273 | 162 | 12 | 39 | 302 | 99 | 345 | 8.37e-20 | 89.4 |
| MS.gene072617.t1 | AT3G48350 | 24.749 | 299 | 184 | 11 | 38 | 319 | 84 | 358 | 9.40e-20 | 89.4 |
| MS.gene072617.t1 | AT2G27420 | 26.667 | 300 | 191 | 10 | 5 | 295 | 49 | 328 | 1.18e-19 | 88.6 |
| MS.gene072617.t1 | AT1G06260 | 27.574 | 272 | 163 | 10 | 38 | 302 | 90 | 334 | 3.32e-19 | 87.4 |
| MS.gene072617.t1 | AT1G29090 | 25.667 | 300 | 189 | 10 | 5 | 295 | 61 | 335 | 2.46e-18 | 85.1 |
| MS.gene072617.t1 | AT4G11310 | 26.619 | 278 | 160 | 11 | 39 | 302 | 97 | 344 | 6.44e-18 | 84.0 |
| MS.gene072617.t1 | AT5G45890 | 25.949 | 316 | 189 | 13 | 4 | 302 | 50 | 337 | 6.49e-18 | 83.6 |
| MS.gene072617.t1 | AT4G11320 | 25.231 | 325 | 173 | 14 | 4 | 302 | 71 | 351 | 2.47e-17 | 82.4 |
| MS.gene072617.t1 | AT4G11320 | 25.231 | 325 | 173 | 14 | 4 | 302 | 71 | 351 | 2.47e-17 | 82.4 |
| MS.gene072617.t1 | AT3G54940 | 28.000 | 250 | 138 | 11 | 75 | 308 | 137 | 360 | 1.16e-16 | 80.5 |
| MS.gene072617.t1 | AT3G19400 | 31.973 | 147 | 93 | 4 | 24 | 168 | 79 | 220 | 5.40e-14 | 71.6 |
Find 0 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAATTAACAAAAAATATT+TGG | + | 50561:9649-9668 | MS.gene072617:intron | 10.0% |
| !!! | GATTTTAATTCTTATTATTT+TGG | + | 50561:5813-5832 | MS.gene072617:intron | 10.0% |
| !! | TACAACTCTTAATAAAATTA+AGG | - | 50561:6540-6559 | MS.gene072617:intergenic | 15.0% |
| !! | TATTCAAAAAAATAAGAAGA+AGG | - | 50561:7041-7060 | MS.gene072617:intergenic | 15.0% |
| !!! | ACTTTAAAGAAAGAAAAAAA+TGG | - | 50561:5772-5791 | MS.gene072617:intergenic | 15.0% |
| !!! | CTTTCTATTTTTATGATTTT+GGG | + | 50561:6213-6232 | MS.gene072617:intron | 15.0% |
| !!! | TCTTTCTATTTTTATGATTT+TGG | + | 50561:6212-6231 | MS.gene072617:intron | 15.0% |
| !!! | TTTTTTTTTCTAATCATGTT+AGG | - | 50561:6031-6050 | MS.gene072617:intergenic | 15.0% |
| !! | AAAAGTGATAGAAAAATGAA+AGG | - | 50561:5676-5695 | MS.gene072617:intergenic | 20.0% |
| !! | AAAATCATTAAAATTGCCAA+AGG | + | 50561:6947-6966 | MS.gene072617:CDS | 20.0% |
| !! | AAAATTAAGGAAAATAACCT+AGG | - | 50561:6527-6546 | MS.gene072617:intergenic | 20.0% |
| !! | AAAATTTAATTGCAAAAGGA+TGG | - | 50561:8190-8209 | MS.gene072617:intergenic | 20.0% |
| !! | AAAGTGATAGAAAAATGAAA+GGG | - | 50561:5675-5694 | MS.gene072617:intergenic | 20.0% |
| !! | AAATGAAAGGGTTATATATT+TGG | - | 50561:5663-5682 | MS.gene072617:intergenic | 20.0% |
| !! | AAATTAAGGAAAATAACCTA+GGG | - | 50561:6526-6545 | MS.gene072617:intergenic | 20.0% |
| !! | AAATTTAATTGCAAAAGGAT+GGG | - | 50561:8189-8208 | MS.gene072617:intergenic | 20.0% |
| !! | AACTAATATAGAAATTGTGT+CGG | - | 50561:6698-6717 | MS.gene072617:intergenic | 20.0% |
| !! | ATCAAAAATATCAAATGTGT+TGG | - | 50561:6062-6081 | MS.gene072617:intergenic | 20.0% |
| !! | ATTAAGCTTCATTAATAGAA+GGG | + | 50561:7559-7578 | MS.gene072617:intron | 20.0% |
| !! | GAAAGAAAGAAAGAAAAAAT+TGG | - | 50561:6169-6188 | MS.gene072617:intergenic | 20.0% |
| !! | GTCTTAAAAATTTGACTATA+AGG | - | 50561:8244-8263 | MS.gene072617:intergenic | 20.0% |
| !! | TAAAAATTTGACTATAAGGA+AGG | - | 50561:8240-8259 | MS.gene072617:intergenic | 20.0% |
| !! | TCAAAAATATCAAATGTGTT+GGG | - | 50561:6061-6080 | MS.gene072617:intergenic | 20.0% |
| !! | TCTTAACTATAAATCATTTC+AGG | + | 50561:8330-8349 | MS.gene072617:intron | 20.0% |
| !! | TTAGTTAAGGAAACAAAAAA+AGG | + | 50561:6315-6334 | MS.gene072617:intron | 20.0% |
| !!! | AAATCATTTTTGCTCATATT+TGG | - | 50561:5945-5964 | MS.gene072617:intergenic | 20.0% |
| !!! | AATAACAACTAGTTTAGTTA+AGG | + | 50561:6302-6321 | MS.gene072617:intron | 20.0% |
| !!! | AATAAGTACTGTTTTACTTT+AGG | - | 50561:9443-9462 | MS.gene072617:intergenic | 20.0% |
| !!! | AATCAAGTTTTAGTATACAT+AGG | - | 50561:5797-5816 | MS.gene072617:intergenic | 20.0% |
| !!! | ATCAAGTATTAAAAAGTGTA+AGG | - | 50561:6396-6415 | MS.gene072617:intergenic | 20.0% |
| !!! | GAATTATTCTTCATTTTGAA+TGG | + | 50561:9987-10006 | MS.gene072617:intron | 20.0% |
| !!! | GATATCTAATTTGTAATACA+AGG | + | 50561:8682-8701 | MS.gene072617:intron | 20.0% |
| !!! | TTGACTTTTTTTTTTTTGAG+AGG | - | 50561:5987-6006 | MS.gene072617:intergenic | 20.0% |
| !!! | TTTGGCAATTTTAATGATTT+TGG | - | 50561:6948-6967 | MS.gene072617:intergenic | 20.0% |
| ! | AAAGAAAAATAGCTGAAATG+AGG | - | 50561:7168-7187 | MS.gene072617:intergenic | 25.0% |
| ! | AAAGTGAGATACACTTTAAA+AGG | - | 50561:6776-6795 | MS.gene072617:intergenic | 25.0% |
| ! | AAATCAGTGGAATACAAATT+GGG | + | 50561:9948-9967 | MS.gene072617:CDS | 25.0% |
| ! | AGTAGTCTTCTATAAATCAT+AGG | + | 50561:9571-9590 | MS.gene072617:intron | 25.0% |
| ! | ATCCAATTTGATCAAAGTAT+GGG | - | 50561:7958-7977 | MS.gene072617:intergenic | 25.0% |
| ! | ATCTTCAAAATTCCAATGTA+AGG | - | 50561:8419-8438 | MS.gene072617:intergenic | 25.0% |
| ! | CAGTTAAATCTAGCAAAAAT+AGG | + | 50561:8802-8821 | MS.gene072617:intron | 25.0% |
| ! | CATTAAGCTTCATTAATAGA+AGG | + | 50561:7558-7577 | MS.gene072617:intron | 25.0% |
| ! | CTTCTATCAATACTTGATAA+AGG | - | 50561:8486-8505 | MS.gene072617:intergenic | 25.0% |
| ! | GCAGAAAATTTAATTGCAAA+AGG | - | 50561:8194-8213 | MS.gene072617:intergenic | 25.0% |
| ! | TAAGTATAGTGAGAATTTCT+TGG | - | 50561:6488-6507 | MS.gene072617:intergenic | 25.0% |
| ! | TCAATGATAAAGTCTTACTT+TGG | + | 50561:8730-8749 | MS.gene072617:intron | 25.0% |
| ! | TGGTATTTAGAAGATTTCAT+AGG | - | 50561:8781-8800 | MS.gene072617:intergenic | 25.0% |
| ! | TTGGATTGTAAATTAGATTG+TGG | + | 50561:8388-8407 | MS.gene072617:intron | 25.0% |
| !! | AAGATCTAGATATATCCTTT+TGG | + | 50561:8356-8375 | MS.gene072617:intron | 25.0% |
| !! | ACATGATTTGATAACAGATT+CGG | - | 50561:7631-7650 | MS.gene072617:intergenic | 25.0% |
| !! | TATTTTGTGAATATTCACCA+TGG | + | 50561:7387-7406 | MS.gene072617:intron | 25.0% |
| !!! | GTACTTAACAGTTCTTTTTT+AGG | - | 50561:6909-6928 | MS.gene072617:intergenic | 25.0% |
| !!! | TTTTTGCATTCATTTTGACA+TGG | + | 50561:7311-7330 | MS.gene072617:CDS | 25.0% |
| AAGACAGTGAGAGTAAATAT+TGG | + | 50561:8259-8278 | MS.gene072617:intron | 30.0% | |
| AATCAGTGGAATACAAATTG+GGG | + | 50561:9949-9968 | MS.gene072617:CDS | 30.0% | |
| ACAGTACTTATTGTATGAGA+TGG | + | 50561:9451-9470 | MS.gene072617:intron | 30.0% | |
| ACTATAGTGTCAAAGCATAT+AGG | + | 50561:8068-8087 | MS.gene072617:CDS | 30.0% | |
| AGACAGTGAGAGTAAATATT+GGG | + | 50561:8260-8279 | MS.gene072617:intron | 30.0% | |
| ATCCAACATAATCTTCCAAA+AGG | - | 50561:8374-8393 | MS.gene072617:intergenic | 30.0% | |
| ATGGCAGAAGTTTATAAGAA+CGG | + | 50561:8115-8134 | MS.gene072617:CDS | 30.0% | |
| ATTCAACTGAAAGTGAAATC+TGG | + | 50561:9123-9142 | MS.gene072617:intron | 30.0% | |
| CAAATCAGTGGAATACAAAT+TGG | + | 50561:9947-9966 | MS.gene072617:CDS | 30.0% | |
| CACCAAAAATATTGTAAGAG+AGG | + | 50561:10145-10164 | MS.gene072617:CDS | 30.0% | |
| CAGTACTTATTGTATGAGAT+GGG | + | 50561:9452-9471 | MS.gene072617:intron | 30.0% | |
| CATCCAATTTGATCAAAGTA+TGG | - | 50561:7959-7978 | MS.gene072617:intergenic | 30.0% | |
| CTATAGTGTCAAAGCATATA+GGG | + | 50561:8069-8088 | MS.gene072617:CDS | 30.0% | |
| GATAGAAAAGATAAGGTCAA+AGG | - | 50561:9247-9266 | MS.gene072617:intergenic | 30.0% | |
| GCTTAATTCTCATATTCTTC+AGG | + | 50561:5432-5451 | MS.gene072617:CDS | 30.0% | |
| GGATTTCAACAATCTATACA+CGG | + | 50561:5473-5492 | MS.gene072617:intron | 30.0% | |
| GGGAAAAGATAGAAAAGATA+AGG | - | 50561:9254-9273 | MS.gene072617:intergenic | 30.0% | |
| GTTACTTCAAGATTAAGAGA+GGG | + | 50561:10075-10094 | MS.gene072617:CDS | 30.0% | |
| TAATCTAATCTACTAACTGC+AGG | + | 50561:10049-10068 | MS.gene072617:intron | 30.0% | |
| TAGCTGAAATGAGGAAATAA+AGG | - | 50561:7159-7178 | MS.gene072617:intergenic | 30.0% | |
| TCACAGCTAAACATTACAAT+GGG | + | 50561:8934-8953 | MS.gene072617:intron | 30.0% | |
| TCGTGTCTGAATTAATTCTA+GGG | + | 50561:6251-6270 | MS.gene072617:intron | 30.0% | |
| TGATTGGACTAATTTCAATG+TGG | - | 50561:8539-8558 | MS.gene072617:intergenic | 30.0% | |
| TGTACTAACAAGTGTGTTAA+GGG | + | 50561:6556-6575 | MS.gene072617:intron | 30.0% | |
| TTAGTCACTTAAGCAATGAA+GGG | - | 50561:7884-7903 | MS.gene072617:intergenic | 30.0% | |
| TTATATGTAGTTGATCTGCA+AGG | - | 50561:5908-5927 | MS.gene072617:intergenic | 30.0% | |
| TTCGTGTCTGAATTAATTCT+AGG | + | 50561:6250-6269 | MS.gene072617:intron | 30.0% | |
| TTGTACTAACAAGTGTGTTA+AGG | + | 50561:6555-6574 | MS.gene072617:intron | 30.0% | |
| TTTAGTCACTTAAGCAATGA+AGG | - | 50561:7885-7904 | MS.gene072617:intergenic | 30.0% | |
| ! | AAGTGTTGTTGTCTAATATC+AGG | - | 50561:9861-9880 | MS.gene072617:intergenic | 30.0% |
| ! | AGCACTATTGGAAGAATTTT+AGG | + | 50561:7002-7021 | MS.gene072617:CDS | 30.0% |
| ! | ATCTTTTCTATCTTTTCCCT+TGG | + | 50561:9255-9274 | MS.gene072617:intron | 30.0% |
| ! | CACCTCTCTTACAATATTTT+TGG | - | 50561:10150-10169 | MS.gene072617:intergenic | 30.0% |
| ! | GCTCTTATGATCTGTATTTT+TGG | + | 50561:7912-7931 | MS.gene072617:intron | 30.0% |
| ! | TGTGTTAGAAAGTGTGTAAA+TGG | + | 50561:8019-8038 | MS.gene072617:CDS | 30.0% |
| ! | TTCACCTACTTTGTTTATGT+TGG | + | 50561:5842-5861 | MS.gene072617:intron | 30.0% |
| ! | TTTTTGCTAGATTTAACTGC+TGG | - | 50561:8801-8820 | MS.gene072617:intergenic | 30.0% |
| !! | ATCCTTTTGGAAGATTATGT+TGG | + | 50561:8369-8388 | MS.gene072617:intron | 30.0% |
| !! | ATGAGTCAAAGGTATTCTAA+CGG | - | 50561:9689-9708 | MS.gene072617:intergenic | 30.0% |
| !! | CTACATATAAGAAGTACTCT+TGG | + | 50561:5918-5937 | MS.gene072617:intron | 30.0% |
| !! | CTCGTTTCATTTTGAAAAAC+GGG | + | 50561:9287-9306 | MS.gene072617:intron | 30.0% |
| !! | GCTCGTTTCATTTTGAAAAA+CGG | + | 50561:9286-9305 | MS.gene072617:intron | 30.0% |
| !! | TAAAGTCTTACTTTGGAGTT+TGG | + | 50561:8737-8756 | MS.gene072617:intron | 30.0% |
| !! | TCGTTTCATTTTGAAAAACG+GGG | + | 50561:9288-9307 | MS.gene072617:intron | 30.0% |
| !!! | AGACATTCTTTTTTATGCAC+AGG | + | 50561:6845-6864 | MS.gene072617:intron | 30.0% |
| !!! | AGTTCCATAGACTTTTTTTC+TGG | - | 50561:9000-9019 | MS.gene072617:intergenic | 30.0% |
| !!! | ATAGATGCTGACTCTTTTTT+TGG | + | 50561:7083-7102 | MS.gene072617:intron | 30.0% |
| !!! | ATTCTTTTTTATGCACAGGT+TGG | + | 50561:6849-6868 | MS.gene072617:intron | 30.0% |
| !!! | CTCTCTTACAATATTTTTGG+TGG | - | 50561:10147-10166 | MS.gene072617:intergenic | 30.0% |
| !!! | CTTACAATATTTTTGGTGGA+AGG | - | 50561:10143-10162 | MS.gene072617:intergenic | 30.0% |
| !!! | GCTATTTTTCTTTATGTTCG+TGG | + | 50561:7175-7194 | MS.gene072617:intron | 30.0% |
| !!! | GTTCCATAGACTTTTTTTCT+GGG | - | 50561:8999-9018 | MS.gene072617:intergenic | 30.0% |
| !!! | TCTTTTTTTGGTTGTTGACA+TGG | + | 50561:7095-7114 | MS.gene072617:intron | 30.0% |
| !!! | TTCCATAGACTTTTTTTCTG+GGG | - | 50561:8998-9017 | MS.gene072617:intergenic | 30.0% |
| AAACTTCTGCCATGATATCT+TGG | - | 50561:8108-8127 | MS.gene072617:intergenic | 35.0% | |
| AAAGGAATTTGATGCAAGGA+CGG | + | 50561:6965-6984 | MS.gene072617:CDS | 35.0% | |
| AAATCTGAGAGAAAACAGAG+GGG | + | 50561:9059-9078 | MS.gene072617:intron | 35.0% | |
| AACAGTGAATGCAACTTCAA+CGG | - | 50561:8143-8162 | MS.gene072617:intergenic | 35.0% | |
| AACGAATACAAAGGAGTAAC+AGG | - | 50561:9214-9233 | MS.gene072617:intergenic | 35.0% | |
| AACTTCTGCCATGATATCTT+GGG | - | 50561:8107-8126 | MS.gene072617:intergenic | 35.0% | |
| AAGAAGGTCATTAACAGAGA+GGG | - | 50561:7749-7768 | MS.gene072617:intergenic | 35.0% | |
| AAGATGCTAAAGAGTGATCT+TGG | - | 50561:6735-6754 | MS.gene072617:intergenic | 35.0% | |
| AATACAGATCATAAGAGCCT+AGG | - | 50561:7910-7929 | MS.gene072617:intergenic | 35.0% | |
| AATGAGAGGAACGAATACAA+AGG | - | 50561:9223-9242 | MS.gene072617:intergenic | 35.0% | |
| AATTGAAGATGATGTTACCG+CGG | + | 50561:10112-10131 | MS.gene072617:CDS | 35.0% | |
| ACACACTTTCTAACACACTT+GGG | - | 50561:8016-8035 | MS.gene072617:intergenic | 35.0% | |
| ACGAATACAAAGGAGTAACA+GGG | - | 50561:9213-9232 | MS.gene072617:intergenic | 35.0% | |
| AGAAATCTGAGAGAAAACAG+AGG | + | 50561:9057-9076 | MS.gene072617:intron | 35.0% | |
| AGCTAAACATTACAATGGGT+TGG | + | 50561:8938-8957 | MS.gene072617:intron | 35.0% | |
| AGGAATTTCTACAAGCTTGA+TGG | + | 50561:8822-8841 | MS.gene072617:intron | 35.0% | |
| AGGATCAGATAAGAACTTAG+TGG | - | 50561:7219-7238 | MS.gene072617:intergenic | 35.0% | |
| AGTAACAGGGATAAGTAACA+AGG | - | 50561:9200-9219 | MS.gene072617:intergenic | 35.0% | |
| AGTGTGTGTAACCGTAAAAT+TGG | - | 50561:5636-5655 | MS.gene072617:intergenic | 35.0% | |
| ATAAAGAGGTTACAAAGCCA+TGG | - | 50561:7407-7426 | MS.gene072617:intergenic | 35.0% | |
| ATAAGGTCAAAGGAAATGAG+AGG | - | 50561:9237-9256 | MS.gene072617:intergenic | 35.0% | |
| ATCGTATGTGATTGTGTTGT+TGG | + | 50561:8634-8653 | MS.gene072617:intron | 35.0% | |
| ATTTGTTCTCTTTCGAACCA+GGG | + | 50561:7675-7694 | MS.gene072617:intron | 35.0% | |
| CAAGAGATCAAATGAGTCAA+AGG | - | 50561:9700-9719 | MS.gene072617:intergenic | 35.0% | |
| CCTCATAGTTTACTGATAAG+CGG | + | 50561:7484-7503 | MS.gene072617:intron | 35.0% | |
| CTCATAGTTTACTGATAAGC+GGG | + | 50561:7485-7504 | MS.gene072617:intron | 35.0% | |
| GAAATCTGAGAGAAAACAGA+GGG | + | 50561:9058-9077 | MS.gene072617:intron | 35.0% | |
| GACCCATACTTTGATCAAAT+TGG | + | 50561:7953-7972 | MS.gene072617:CDS | 35.0% | |
| GATAGAAGTTGAAAACTGAC+TGG | + | 50561:8498-8517 | MS.gene072617:intron | 35.0% | |
| GCTTAAGTGACTAAAATCCT+AGG | + | 50561:7890-7909 | MS.gene072617:intron | 35.0% | |
| GGAACCAACATAAACAAAGT+AGG | - | 50561:5849-5868 | MS.gene072617:intergenic | 35.0% | |
| GGGTAACATTTGCAAGAATA+AGG | + | 50561:8656-8675 | MS.gene072617:intron | 35.0% | |
| GGTTACTTCAAGATTAAGAG+AGG | + | 50561:10074-10093 | MS.gene072617:CDS | 35.0% | |
| GGTTCGAAAGAGAACAAATA+TGG | - | 50561:7674-7693 | MS.gene072617:intergenic | 35.0% | |
| GTAACAGGGATAAGTAACAA+GGG | - | 50561:9199-9218 | MS.gene072617:intergenic | 35.0% | |
| GTCACAGCTAAACATTACAA+TGG | + | 50561:8933-8952 | MS.gene072617:intron | 35.0% | |
| GTCTTCTATAAATCATAGGC+AGG | + | 50561:9575-9594 | MS.gene072617:intron | 35.0% | |
| GTGATCTTGGACATAAGTTA+AGG | - | 50561:6722-6741 | MS.gene072617:intergenic | 35.0% | |
| GTGTAAATGGAAACCAGATT+TGG | + | 50561:8032-8051 | MS.gene072617:CDS | 35.0% | |
| TAAAGGAATCACCTGATCTT+TGG | - | 50561:7142-7161 | MS.gene072617:intergenic | 35.0% | |
| TACACACTTTCTAACACACT+TGG | - | 50561:8017-8036 | MS.gene072617:intergenic | 35.0% | |
| TACCCCAGAAAAAAAGTCTA+TGG | + | 50561:8993-9012 | MS.gene072617:intron | 35.0% | |
| TAGTGTTAGAACAAAAACCC+TGG | - | 50561:7695-7714 | MS.gene072617:intergenic | 35.0% | |
| TATTTGTTCTCTTTCGAACC+AGG | + | 50561:7674-7693 | MS.gene072617:intron | 35.0% | |
| TCCAATCATCATTTAAGCGT+AGG | + | 50561:8551-8570 | MS.gene072617:intron | 35.0% | |
| TCTCAGATTTCTCTTACTAG+TGG | - | 50561:9049-9068 | MS.gene072617:intergenic | 35.0% | |
| TGAAATCCAAACGTTGATCA+TGG | - | 50561:5461-5480 | MS.gene072617:intergenic | 35.0% | |
| TGGCAGAAGTTTATAAGAAC+GGG | + | 50561:8116-8135 | MS.gene072617:CDS | 35.0% | |
| TTCTCTTACTAGTGTCCTTA+GGG | - | 50561:6606-6625 | MS.gene072617:intergenic | 35.0% | |
| TTTCTCTTACTAGTGTCCTT+AGG | - | 50561:6607-6626 | MS.gene072617:intergenic | 35.0% | |
| ! | AAGTTGAAAACTGACTGGTT+TGG | + | 50561:8503-8522 | MS.gene072617:intron | 35.0% |
| ! | AGACACGAATATCTTGCTTT+TGG | - | 50561:6239-6258 | MS.gene072617:intergenic | 35.0% |
| ! | ATTGTGGATTGACCTTACAT+TGG | + | 50561:8404-8423 | MS.gene072617:intron | 35.0% |
| ! | GATTTTGCTCACTACAAATC+AGG | + | 50561:9724-9743 | MS.gene072617:CDS | 35.0% |
| ! | GATTTTGGATGAGTTACAAC+AGG | - | 50561:6933-6952 | MS.gene072617:intergenic | 35.0% |
| ! | GCTAAACATTACAATGGGTT+GGG | + | 50561:8939-8958 | MS.gene072617:intron | 35.0% |
| ! | TATGATCATCATTTTCTCGC+AGG | + | 50561:5541-5560 | MS.gene072617:intron | 35.0% |
| ! | TCCTCGTTTCTCCAATTTTA+CGG | + | 50561:5622-5641 | MS.gene072617:CDS | 35.0% |
| ! | TCGTATGTGATTGTGTTGTT+GGG | + | 50561:8635-8654 | MS.gene072617:intron | 35.0% |
| ! | TCTATACACGGTTGATTTCA+TGG | + | 50561:5485-5504 | MS.gene072617:intron | 35.0% |
| ! | TGTCGTCTTTTGTGCTTTTA+GGG | + | 50561:9316-9335 | MS.gene072617:intron | 35.0% |
| ! | TTGTCGTCTTTTGTGCTTTT+AGG | + | 50561:9315-9334 | MS.gene072617:intron | 35.0% |
| !! | CTCATGTTGATGATGATTCA+GGG | + | 50561:7237-7256 | MS.gene072617:intron | 35.0% |
| !! | TCATCAAAAAAAGTGCCCTA+AGG | + | 50561:6588-6607 | MS.gene072617:intron | 35.0% |
| !! | TTAAGCGTAGGCTATTTCTT+TGG | + | 50561:8563-8582 | MS.gene072617:intron | 35.0% |
| !!! | AGTTGCATTCACTGTTTTTG+AGG | + | 50561:8147-8166 | MS.gene072617:CDS | 35.0% |
| !!! | TTTTTCTGGGGTAACATGAT+TGG | - | 50561:8986-9005 | MS.gene072617:intergenic | 35.0% |
| AATCTGAGAGAAAACAGAGG+GGG | + | 50561:9060-9079 | MS.gene072617:intron | 40.0% | |
| AATGTTCTAGCAAGCTCAAG+CGG | - | 50561:7515-7534 | MS.gene072617:intergenic | 40.0% | |
| ACAGATTAACGAAAACCCAG+AGG | + | 50561:5577-5596 | MS.gene072617:CDS | 40.0% | |
| ACAGTGAATGCAACTTCAAC+GGG | - | 50561:8142-8161 | MS.gene072617:intergenic | 40.0% | |
| ACCGTAAAATTGGAGAAACG+AGG | - | 50561:5626-5645 | MS.gene072617:intergenic | 40.0% | |
| ACTTCTGCCATGATATCTTG+GGG | - | 50561:8106-8125 | MS.gene072617:intergenic | 40.0% | |
| AGGTAACCATGATCAACGTT+TGG | + | 50561:5452-5471 | MS.gene072617:intron | 40.0% | |
| ATAACCTAGGGCAGTAGTTA+AGG | - | 50561:6514-6533 | MS.gene072617:intergenic | 40.0% | |
| ATGGAAACCAGATTTGGAAG+AGG | + | 50561:8038-8057 | MS.gene072617:CDS | 40.0% | |
| ATTGAAGATGATGTTACCGC+GGG | + | 50561:10113-10132 | MS.gene072617:CDS | 40.0% | |
| ATTTCCTTAACTACTGCCCT+AGG | + | 50561:6507-6526 | MS.gene072617:intron | 40.0% | |
| CAAGAAGGTCATTAACAGAG+AGG | - | 50561:7750-7769 | MS.gene072617:intergenic | 40.0% | |
| CAGTGAGAGTAAATATTGGG+AGG | + | 50561:8263-8282 | MS.gene072617:intron | 40.0% | |
| CCGCTTATCAGTAAACTATG+AGG | - | 50561:7487-7506 | MS.gene072617:intergenic | 40.0% | |
| CCTGAATCATCATCAACATG+AGG | - | 50561:7239-7258 | MS.gene072617:intergenic | 40.0% | |
| CTGAAGTTGCTTAAACGTTG+GGG | - | 50561:9505-9524 | MS.gene072617:intergenic | 40.0% | |
| CTGATCTTTGGTGAGGAAAT+CGG | - | 50561:7130-7149 | MS.gene072617:intergenic | 40.0% | |
| GACTCATTTGATCTCTTGAC+AGG | + | 50561:9702-9721 | MS.gene072617:intron | 40.0% | |
| GATCCATGGAACACACAATT+AGG | - | 50561:9478-9497 | MS.gene072617:intergenic | 40.0% | |
| GCCTACGCTTAAATGATGAT+TGG | - | 50561:8555-8574 | MS.gene072617:intergenic | 40.0% | |
| GCTGAAGTTGCTTAAACGTT+GGG | - | 50561:9506-9525 | MS.gene072617:intergenic | 40.0% | |
| GGAGTTTACAAACACATCAC+AGG | + | 50561:9745-9764 | MS.gene072617:CDS | 40.0% | |
| GTAGTCAGCGATAAGAGAAA+GGG | + | 50561:8844-8863 | MS.gene072617:intron | 40.0% | |
| GTCATGCAGTAAAGCTGATT+GGG | + | 50561:9782-9801 | MS.gene072617:CDS | 40.0% | |
| GTCCTTGCATCAAATTCCTT+TGG | - | 50561:6966-6985 | MS.gene072617:intergenic | 40.0% | |
| GTGTGTGAGTAGAGATAAAG+AGG | - | 50561:7421-7440 | MS.gene072617:intergenic | 40.0% | |
| TAGTCAGCGATAAGAGAAAG+GGG | + | 50561:8845-8864 | MS.gene072617:intron | 40.0% | |
| TCAGCAGACTTATGAGTCAT+TGG | + | 50561:9521-9540 | MS.gene072617:intron | 40.0% | |
| TGAAGTTGCTTAAACGTTGG+GGG | - | 50561:9504-9523 | MS.gene072617:intergenic | 40.0% | |
| TGCCAAAGGAATTTGATGCA+AGG | + | 50561:6961-6980 | MS.gene072617:CDS | 40.0% | |
| TGCTGAAGTTGCTTAAACGT+TGG | - | 50561:9507-9526 | MS.gene072617:intergenic | 40.0% | |
| TTCAGCTTCTTGCAAATCAG+TGG | + | 50561:9935-9954 | MS.gene072617:intron | 40.0% | |
| TTGGGAGAATGCTTTGTGTT+CGG | + | 50561:8957-8976 | MS.gene072617:intron | 40.0% | |
| TTGGTTCCAATCTCTGTGAT+AGG | + | 50561:5861-5880 | MS.gene072617:intron | 40.0% | |
| ! | CGTATGTGATTGTGTTGTTG+GGG | + | 50561:8636-8655 | MS.gene072617:intron | 40.0% |
| ! | CTAGTTGTTATTAGTGCCCT+CGG | - | 50561:6294-6313 | MS.gene072617:intergenic | 40.0% |
| ! | GTCGTCTTTTGTGCTTTTAG+GGG | + | 50561:9317-9336 | MS.gene072617:intron | 40.0% |
| ! | TATTCTAACGGATGCGAGAA+TGG | - | 50561:9677-9696 | MS.gene072617:intergenic | 40.0% |
| ! | TCGTCTTTTGTGCTTTTAGG+GGG | + | 50561:9318-9337 | MS.gene072617:intron | 40.0% |
| !! | AAACGAGCACTGAAAACCAA+GGG | - | 50561:9274-9293 | MS.gene072617:intergenic | 40.0% |
| !! | CATCGCTTTTGTGCTGTATA+TGG | + | 50561:9604-9623 | MS.gene072617:intron | 40.0% |
| !! | CCTCATGTTGATGATGATTC+AGG | + | 50561:7236-7255 | MS.gene072617:intron | 40.0% |
| AAGAGAGGGACAAACGAATG+TGG | + | 50561:10089-10108 | MS.gene072617:CDS | 45.0% | |
| AATGACCTTCTTGCATGCTG+TGG | + | 50561:7757-7776 | MS.gene072617:CDS | 45.0% | |
| AATTTGATGCAAGGACGGCT+TGG | + | 50561:6970-6989 | MS.gene072617:CDS | 45.0% | |
| ACAGGGATAAGTAACAAGGG+TGG | - | 50561:9196-9215 | MS.gene072617:intergenic | 45.0% | |
| AGTCAGCGATAAGAGAAAGG+GGG | + | 50561:8846-8865 | MS.gene072617:intron | 45.0% | |
| AGTCCACCTATCACAGAGAT+TGG | - | 50561:5870-5889 | MS.gene072617:intergenic | 45.0% | |
| ATATTGGGAGGCTCTGTTCA+AGG | + | 50561:8275-8294 | MS.gene072617:intron | 45.0% | |
| ATGATGATTCAGGGTCACTG+CGG | + | 50561:7246-7265 | MS.gene072617:intron | 45.0% | |
| ATGCAGTAAAGCTGATTGGG+TGG | + | 50561:9785-9804 | MS.gene072617:CDS | 45.0% | |
| ATGCTGTGGATTTCTCTGTG+GGG | + | 50561:7771-7790 | MS.gene072617:CDS | 45.0% | |
| ATTAACGAAAACCCAGAGGC+AGG | + | 50561:5581-5600 | MS.gene072617:CDS | 45.0% | |
| CAAATTGGATGTTCTCACCC+TGG | + | 50561:7968-7987 | MS.gene072617:CDS | 45.0% | |
| CACTTGGGAGTTTGATATGC+TGG | - | 50561:8001-8020 | MS.gene072617:intergenic | 45.0% | |
| CATGCTGTGGATTTCTCTGT+GGG | + | 50561:7770-7789 | MS.gene072617:CDS | 45.0% | |
| CCTCTTGAAAGAGGAACTAC+GGG | + | 50561:7457-7476 | MS.gene072617:intron | 45.0% | |
| CGATTTCCTCACCAAAGATC+AGG | + | 50561:7128-7147 | MS.gene072617:intron | 45.0% | |
| CGTGGTTCACTGTGTTTCTT+TGG | + | 50561:7193-7212 | MS.gene072617:intron | 45.0% | |
| CTAATCTACTAACTGCAGGC+TGG | + | 50561:10053-10072 | MS.gene072617:intron | 45.0% | |
| CTACTCACACACCTACTTGA+GGG | + | 50561:7429-7448 | MS.gene072617:intron | 45.0% | |
| GAAATCCACAGCATGCAAGA+AGG | - | 50561:7765-7784 | MS.gene072617:intergenic | 45.0% | |
| GAATCACCTGATCTTTGGTG+AGG | - | 50561:7137-7156 | MS.gene072617:intergenic | 45.0% | |
| GCCTCTTGAAAGAGGAACTA+CGG | + | 50561:7456-7475 | MS.gene072617:intron | 45.0% | |
| GCTTTGACCTCTTCCAAATC+TGG | - | 50561:8048-8067 | MS.gene072617:intergenic | 45.0% | |
| GGACAATTTAAGCGCCTTCT+TGG | + | 50561:6870-6889 | MS.gene072617:CDS | 45.0% | |
| GGTAGTCAGCGATAAGAGAA+AGG | + | 50561:8843-8862 | MS.gene072617:intron | 45.0% | |
| GGTCATGCAGTAAAGCTGAT+TGG | + | 50561:9781-9800 | MS.gene072617:CDS | 45.0% | |
| GTCTGATCCCCAAGATATCA+TGG | + | 50561:8096-8115 | MS.gene072617:CDS | 45.0% | |
| GTGCTTGTTTGACTCCAAGA+AGG | - | 50561:6887-6906 | MS.gene072617:intergenic | 45.0% | |
| GTTCCAATCTCTGTGATAGG+TGG | + | 50561:5864-5883 | MS.gene072617:intron | 45.0% | |
| TACTCACACACCTACTTGAG+GGG | + | 50561:7430-7449 | MS.gene072617:intron | 45.0% | |
| TAGTTTACTGATAAGCGGGC+AGG | + | 50561:7489-7508 | MS.gene072617:intron | 45.0% | |
| TCTACTCACACACCTACTTG+AGG | + | 50561:7428-7447 | MS.gene072617:intron | 45.0% | |
| TGATGAAGGGGAGGACTATT+GGG | + | 50561:9816-9835 | MS.gene072617:CDS | 45.0% | |
| TGCAGTAAAGCTGATTGGGT+GGG | + | 50561:9786-9805 | MS.gene072617:CDS | 45.0% | |
| TGTAAGAGAGGTGACTGACA+TGG | + | 50561:10157-10176 | MS.gene072617:CDS | 45.0% | |
| ! | AAGTATCGCCACGCATAAAG+TGG | - | 50561:7817-7836 | MS.gene072617:intergenic | 45.0% |
| ! | GCTTTTGTGCTGTATATGGC+TGG | + | 50561:9608-9627 | MS.gene072617:intron | 45.0% |
| !! | GAAACGAGCACTGAAAACCA+AGG | - | 50561:9275-9294 | MS.gene072617:intergenic | 45.0% |
| !! | TCTTTTGTGCTTTTAGGGGG+CGG | + | 50561:9321-9340 | MS.gene072617:intron | 45.0% |
| ACTGACATGGATGCTGATGC+TGG | + | 50561:10170-10189 | MS.gene072617:CDS | 50.0% | |
| ATCACAGGTTCTGCACTAGG+TGG | + | 50561:9760-9779 | MS.gene072617:CDS | 50.0% | |
| CACATCACAGGTTCTGCACT+AGG | + | 50561:9757-9776 | MS.gene072617:CDS | 50.0% | |
| CATGCTTACTAGTGCTCCGA+GGG | + | 50561:6275-6294 | MS.gene072617:intron | 50.0% | |
| CCCGTAGTTCCTCTTTCAAG+AGG | - | 50561:7460-7479 | MS.gene072617:intergenic | 50.0% | |
| CCTCTTCAGTGACAACACCA+TGG | - | 50561:7846-7865 | MS.gene072617:intergenic | 50.0% | |
| CTGACATGGATGCTGATGCT+GGG | + | 50561:10171-10190 | MS.gene072617:CDS | 50.0% | |
| GCAGTAAAGCTGATTGGGTG+GGG | + | 50561:9787-9806 | MS.gene072617:CDS | 50.0% | |
| GCATGCTGTGGATTTCTCTG+TGG | + | 50561:7769-7788 | MS.gene072617:CDS | 50.0% | |
| GGGCCTAATTGTGTGTTCCA+TGG | + | 50561:9472-9491 | MS.gene072617:intron | 50.0% | |
| GGTGGGGAACAAGTGATGAA+GGG | + | 50561:9803-9822 | MS.gene072617:CDS | 50.0% | |
| GTGATGAAGGGGAGGACTAT+TGG | + | 50561:9815-9834 | MS.gene072617:CDS | 50.0% | |
| GTGGGGAACAAGTGATGAAG+GGG | + | 50561:9804-9823 | MS.gene072617:CDS | 50.0% | |
| TCATGCTTACTAGTGCTCCG+AGG | + | 50561:6274-6293 | MS.gene072617:intron | 50.0% | |
| TGAGAGAAAACAGAGGGGGT+GGG | + | 50561:9064-9083 | MS.gene072617:intron | 50.0% | |
| TGCGGTTCTTGTTGGGCATT+TGG | + | 50561:7264-7283 | MS.gene072617:CDS | 50.0% | |
| TGGCGATACTTAGCTCACCA+TGG | + | 50561:7826-7845 | MS.gene072617:CDS | 50.0% | |
| TGGTCGCAGTGTAGCACTAT+TGG | + | 50561:6990-7009 | MS.gene072617:CDS | 50.0% | |
| TTTGGTGGAAGGTAAACCCG+CGG | - | 50561:10132-10151 | MS.gene072617:intergenic | 50.0% | |
| ! | GTCGGAGGTGTAGGCAAAAT+TGG | + | 50561:7605-7624 | MS.gene072617:intron | 50.0% |
| !! | CCATGGTGTTGTCACTGAAG+AGG | + | 50561:7843-7862 | MS.gene072617:CDS | 50.0% |
| !! | GATATGCTGGCTCACAACCA+GGG | - | 50561:7988-8007 | MS.gene072617:intergenic | 50.0% |
| !! | GGCGGATTGACTTAGGAGTT+AGG | + | 50561:9339-9358 | MS.gene072617:intron | 50.0% |
| !! | TGATATGCTGGCTCACAACC+AGG | - | 50561:7989-8008 | MS.gene072617:intergenic | 50.0% |
| !! | TTTAGGGGGCGGATTGACTT+AGG | + | 50561:9332-9351 | MS.gene072617:intron | 50.0% |
| AAGAGGCAAGCCCCTCAAGT+AGG | - | 50561:7443-7462 | MS.gene072617:intergenic | 55.0% | |
| ACGAAAACCCAGAGGCAGGA+TGG | + | 50561:5585-5604 | MS.gene072617:CDS | 55.0% | |
| AGGGGCTTGCCTCTTGAAAG+AGG | + | 50561:7448-7467 | MS.gene072617:intron | 55.0% | |
| AGGGTCACTGCGGTTCTTGT+TGG | + | 50561:7256-7275 | MS.gene072617:intron | 55.0% | |
| CAGCCAAGCCACTCTGTAGT+CGG | + | 50561:7587-7606 | MS.gene072617:intron | 55.0% | |
| CGAAAACCCAGAGGCAGGAT+GGG | + | 50561:5586-5605 | MS.gene072617:CDS | 55.0% | |
| CTACACCTCCGACTACAGAG+TGG | - | 50561:7598-7617 | MS.gene072617:intergenic | 55.0% | |
| CTGAGAGAAAACAGAGGGGG+TGG | + | 50561:9063-9082 | MS.gene072617:intron | 55.0% | |
| GGGAACAAGTGATGAAGGGG+AGG | + | 50561:9807-9826 | MS.gene072617:CDS | 55.0% | |
| GGGTCACTGCGGTTCTTGTT+GGG | + | 50561:7257-7276 | MS.gene072617:intron | 55.0% | |
| GGGTGGGGAACAAGTGATGA+AGG | + | 50561:9802-9821 | MS.gene072617:CDS | 55.0% | |
| TGTGGATTTCTCTGTGGGGC+TGG | + | 50561:7775-7794 | MS.gene072617:CDS | 55.0% | |
| ! | AACGTTGGGGGTGTGATCCA+TGG | - | 50561:9492-9511 | MS.gene072617:intergenic | 55.0% |
| ! | CACTCTGTAGTCGGAGGTGT+AGG | + | 50561:7596-7615 | MS.gene072617:intron | 55.0% |
| AAACCCAGAGGCAGGATGGG+AGG | + | 50561:5589-5608 | MS.gene072617:CDS | 60.0% | |
| CCAAGCCACTCTGTAGTCGG+AGG | + | 50561:7590-7609 | MS.gene072617:intron | 60.0% | |
| CCTCCGACTACAGAGTGGCT+TGG | - | 50561:7593-7612 | MS.gene072617:intergenic | 60.0% | |
| GGGGGACTCCACTTTATGCG+TGG | + | 50561:7806-7825 | MS.gene072617:CDS | 60.0% | |
| !! | TCTGTGGGGCTGGCTGTGAT+GGG | + | 50561:7785-7804 | MS.gene072617:CDS | 60.0% |
| CAGCCTCCCATCCTGCCTCT+GGG | - | 50561:5595-5614 | MS.gene072617:intergenic | 65.0% | |
| !! | CTCTGTGGGGCTGGCTGTGA+TGG | + | 50561:7784-7803 | MS.gene072617:CDS | 65.0% |
| !! | CTGTGGGGCTGGCTGTGATG+GGG | + | 50561:7786-7805 | MS.gene072617:CDS | 65.0% |
| !! | TGTGGGGCTGGCTGTGATGG+GGG | + | 50561:7787-7806 | MS.gene072617:CDS | 65.0% |
| GCAGCCTCCCATCCTGCCTC+TGG | - | 50561:5596-5615 | MS.gene072617:intergenic | 70.0% | |
| !! | GTGGGGCTGGCTGTGATGGG+GGG | + | 50561:7788-7807 | MS.gene072617:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 50561 | gene | 5406 | 10193 | 5406 | ID=MS.gene072617 |
| 50561 | mRNA | 5406 | 10193 | 5406 | ID=MS.gene072617.t1;Parent=MS.gene072617 |
| 50561 | exon | 5406 | 5453 | 5406 | ID=MS.gene072617.t1.exon1;Parent=MS.gene072617.t1 |
| 50561 | CDS | 5406 | 5453 | 5406 | ID=cds.MS.gene072617.t1;Parent=MS.gene072617.t1 |
| 50561 | exon | 5563 | 5643 | 5563 | ID=MS.gene072617.t1.exon2;Parent=MS.gene072617.t1 |
| 50561 | CDS | 5563 | 5643 | 5563 | ID=cds.MS.gene072617.t1;Parent=MS.gene072617.t1 |
| 50561 | exon | 6867 | 7023 | 6867 | ID=MS.gene072617.t1.exon3;Parent=MS.gene072617.t1 |
| 50561 | CDS | 6867 | 7023 | 6867 | ID=cds.MS.gene072617.t1;Parent=MS.gene072617.t1 |
| 50561 | exon | 7145 | 7149 | 7145 | ID=MS.gene072617.t1.exon4;Parent=MS.gene072617.t1 |
| 50561 | CDS | 7145 | 7149 | 7145 | ID=cds.MS.gene072617.t1;Parent=MS.gene072617.t1 |
| 50561 | exon | 7258 | 7332 | 7258 | ID=MS.gene072617.t1.exon5;Parent=MS.gene072617.t1 |
| 50561 | CDS | 7258 | 7332 | 7258 | ID=cds.MS.gene072617.t1;Parent=MS.gene072617.t1 |
| 50561 | exon | 7739 | 7864 | 7739 | ID=MS.gene072617.t1.exon6;Parent=MS.gene072617.t1 |
| 50561 | CDS | 7739 | 7864 | 7739 | ID=cds.MS.gene072617.t1;Parent=MS.gene072617.t1 |
| 50561 | exon | 7950 | 8168 | 7950 | ID=MS.gene072617.t1.exon7;Parent=MS.gene072617.t1 |
| 50561 | CDS | 7950 | 8168 | 7950 | ID=cds.MS.gene072617.t1;Parent=MS.gene072617.t1 |
| 50561 | exon | 9724 | 9837 | 9724 | ID=MS.gene072617.t1.exon8;Parent=MS.gene072617.t1 |
| 50561 | CDS | 9724 | 9837 | 9724 | ID=cds.MS.gene072617.t1;Parent=MS.gene072617.t1 |
| 50561 | exon | 9940 | 9975 | 9940 | ID=MS.gene072617.t1.exon9;Parent=MS.gene072617.t1 |
| 50561 | CDS | 9940 | 9975 | 9940 | ID=cds.MS.gene072617.t1;Parent=MS.gene072617.t1 |
| 50561 | exon | 10071 | 10193 | 10071 | ID=MS.gene072617.t1.exon10;Parent=MS.gene072617.t1 |
| 50561 | CDS | 10071 | 10193 | 10071 | ID=cds.MS.gene072617.t1;Parent=MS.gene072617.t1 |
| Gene Sequence |
| Protein sequence |
